Pregenerated sensors for COL8A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068196Ensembl transcript IDs: ENSMUST00000089332.5
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCCTGCAGCTCAAAGCATTGCCTCTAACACAGAGAAATATCCTTTaGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCC | + |
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Preference number: 1 (lower is better) Translates to: VLQLKALPLTQRNIL*TRDYHGPCTTEEPS Trigger: GGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGATATTTCTCTGTGTTAGAGGCAATGCTTTGAGCTGCAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR TCA 90 bp | TGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATaGTCCCATTACAATCTGCTGTGCACAGGACTAAACATGCGTTTT | + |
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Preference number: 1 (lower is better) Translates to: WVQHTCQYFIHTSVP*SHYNLLCTGLNMRF Trigger: AAAACGCATGTTTAGTCCTGTGCACAGCAGATTGTAATGGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR TCA 90 bp | CAACATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCATACCTCGGTCCCATaGTCCCATTACAATCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QHGLAVVLSVQWHRRPEVHTSVP*SHYNLL Trigger: CAGCAGATTGTAATGGGATCATGGGACCGAGGTATG...CACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTAAGTAAAACACCTGCATaGAATAGAGAGGAAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: HGLAVVLSVQWHRRPEVLSKTPA*NREESM Trigger: CATGCTTTCCTCTCTATTTCATGCAGGTGTTTTACT...TAGCACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR TCA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTCAACTGGTCGTGTTTTaGGCATCAGCCAAAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: YKPVSLGATPRKAVQRHAQLVVF*ASAKEP Trigger: AGGTTCTTTGGCTGATGCTCAAAACACGACCAGTTG...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCCCAGGCGGATGTTAAAGAAACAATTATCTTCCTACAACCGTAGTCCCTATCAGGCTAGCATCTCCTaGCCTGCATCTCACCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: FPRRMLKKQLSSYNRSPYQASIS*PASHPV Trigger: AACTGGGTGAGATGCAGGGCAGGAGATGCTAGCCTG...ATAGGGACTACGGTTGTAGGAAGATAATTGTTTCTTTAACATCCGCCTGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR CCA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTCAGAGAAATATCCTTTaGACTAGAGATTACCATGGA | + |
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Preference number: 2 (lower is better) Translates to: YKPVSLGATPRKAVQRHAQRNIL*TRDYHG Trigger: TCCATGGTAATCTCTAGTCCAAAGGATATTTCTCTG...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR CCA 90 bp | TTTATACTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCAACTATGAGCTCCTGTaGGCTCTGCCCTGCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: FILYLSVHFPIYVSLFSSNYELL*ALPCIP Trigger: TGGGATGCAGGGCAGAGCCCACAGGAGCTCATAGTT...GGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAGTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR GCA 90 bp | TTTATACTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCTTGCTGGAAGCAACATaGCTGCTTTTGAATATCAAA | + |
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Preference number: 2 (lower is better) Translates to: FILYLSVHFPIYVSLFSSLLEAT*LLLNIK Trigger: TTTGATATTCAAAAGCAGGCATGTTGCTTCCAGCAA...GGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAGTATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR CCA 72 bp | CTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTATaGCTTATGACACTCCAGCTATCTCTTCCCCAGGCG | + |
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Preference number: 3 (lower is better) Translates to: LSVQWHRRPEVL*LMTLQLSLPQA Trigger: CGCCTGGGGAAGAGATAGCTGGAGTGTCATAAGCCATAGCACCTCAGGCCTACGATGCCACTGCACGCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR TCA 72 bp | CACACGTGTCAGTACTTCATCCATACCTCGGTCCCATaGTCCCATTACAATCTGCTGTGCACAGGACTAAAC | + |
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Preference number: 3 (lower is better) Translates to: HTCQYFIHTSVP*SHYNLLCTGLN Trigger: GTTTAGTCCTGTGCACAGCAGATTGTAATGGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR CCA 72 bp | CTCAAAGCATTGCCTCTAACACAGAGAAATATCCTTTaGACTAGAGATTACCATGGACCCTGCACTACAGAA | + |
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Preference number: 3 (lower is better) Translates to: LKALPLTQRNIL*TRDYHGPCTTE Trigger: TTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGATATTTCTCTGTGTTAGAGGCAATGCTTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR CAA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATTTTTGGCAATTGACTTaGGAACCTCATGGCATAAGT | + |
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Preference number: 3 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYFWQLT*EPHGIS Trigger: ACTTATGCCATGAGGTTCCAAAGTCAATTGCCAAAA...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR CAA 90 bp | TTCCCCAGGCGGATGTTAAAGAAACAATTATCTTCCTACAACCGTAGTCCCTATTTGGATTTTTGGCAATaGACTTTGGAACCTCATGGC | + |
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Preference number: 3 (lower is better) Translates to: FPRRMLKKQLSSYNRSPYLDFWQ*TLEPHG Trigger: GCCATGAGGTTCCAAAGTCAATTGCCAAAAATCCAA...ATAGGGACTACGGTTGTAGGAAGATAATTGTTTCTTTAACATCCGCCTGGGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCTGGTTTCTGCAGCTCAAAGCATaGCCTCTAACACAGAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: LYLSVHFPIYVSLFSSWFLQLKA*PLTQRN Trigger: ATTTCTCTGTGTTAGAGGCAATGCTTTGAGCTGCAG...AAACCAGGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCTGGTTTCATGAAATGGCAAAGTaGTTTGAGGGAAGGCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: LYLSVHFPIYVSLFSSWFHEMAK*FEGRLC Trigger: ACAAAGCCTTCCCTCAAACAACTTTGCCATTTCATG...AAACCAGGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR TCA 72 bp | ATCATAGTACTGTCCCTAGAAAGTAGAACACATACTTaGTTCACTTGCTTTCACACCACTGTGGACATGATG | + |
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Preference number: 3 (lower is better) Translates to: IIVLSLESRTHT*FTCFHTTVDMM Trigger: CATCATGTCCACAGTGGTGTGAAAGCAAGTGAATCAAGTATGTGTTCTACTTTCTAGGGACAGTACTATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| 3UTR CCA 72 bp | ATACATGTACAGATAAAAGCAACTTTACAACCCATCTaGCCAGACCATTTCAACGTAGCTATTGAGCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: IHVQIKATLQPI*PDHFNVAIEQK Trigger: TTTCTGCTCAATAGCTACGTTGAAATGGTCTGGCCAGATGGGTTGTAAAGTTGCTTTTATCTGTACATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | CATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTAGGGTCCTGGGAAACCTaGCTTTCCGACCCCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HGLAVVLSVQWHRRPEVLGSWET*LSDPWE Trigger: CTCCCAGGGGTCGGAAAGCCAGGTTTCCCAGGACCC...TAGCACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | CATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTACTCTCCCTTGGGGCCTaGTGGACCCTGTGGTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: HGLAVVLSVQWHRRPEVLLSLGA*WTLWSY Trigger: GTAGGACCACAGGGTCCACCAGGCCCCAAGGGAGAG...TAGCACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | CAACATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGTGGGGCCCCCACCGGTaGGAAAGGTACAGTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QHGLAVVLSVQWHRRPEVWGPHR*ERYSQL Trigger: GAGCTGACTGTACCTTTCCCACCGGTGGGGGCCCCA...CACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR TCA 90 bp | GCTAATGAGTCCGCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGAGGCCAGGCTGGCCTTaGGGCCCAAGGGCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ANESAGYNTRVSTSSIPRRPGWP*GPRAPG Trigger: ACCTGGTGCCCTTGGGCCTCAAGGCCAGCCTGGCCT...CCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGCGGACTCATTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTAATGAGTCCGCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGGCCGGGAGGTCCTGGTaGTCCTTTGGGCCCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ANESAGYNTRVSTSSIPRAGRSW*SFGPPL Trigger: GAGAGGGGGCCCAAAGGACCACCAGGACCTCCCGGC...CCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGCGGACTCATTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCTGGTCCAGGTTCCCCTaGAGGCCCTGGCTTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPWSRFP*RPWLPQ Trigger: CTGGGGAAGCCAGGGCCTCCAGGGGAACCTGGACCA...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTAATGAGTCCGCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTGGCTTTCCGACCCCTaGGAGGCCTGGGGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ANESAGYNTRVSTSSIPRWLSDP*EAWGSR Trigger: CCTGGACCCCCAGGCCTCCCAGGGGTCGGAAAGCCA...CCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGCGGACTCATTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCCCCAGGTGGTCCTCTTaGTCCAGGTTCTCCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPPRWSS*SRFSTG Trigger: CCCCGTGGAGAACCTGGACCAAGAGGACCACCTGGG...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCACCTGGCGGCCCAGGTaGTCCTCTTGGTCCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPTWRPR*SSWSRF Trigger: GAACCTGGACCAAGAGGACCACCTGGGCCGCCAGGT...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTAATGAGTCCGCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGGGCCTGGTTCTCCTTTaGGGCCCGGAATCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: ANESAGYNTRVSTSSIPRGLVLL*GPESQG Trigger: CCCCTGGGATTCCGGGCCCCAAAGGAGAACCAGGCC...CCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGCGGACTCATTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR GCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCGGTCCAGGAGGGCCATaGATACCTGGAGGACCCTTC | + |
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Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPGPGGP*IPGGPF Trigger: GAAGGGTCCTCCAGGTATGCATGGCCCTCCTGGACC...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCGAAACCAATAGCACCTaGAGGGCCCATGGGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPETNST*RAHGTR Trigger: CCGGGTCCCATGGGCCCTCCAGGTGCTATTGGTTTC...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | CATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTATGCCAGGTTCTCCTTTaGGTCCAAGCAGCCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: HGLAVVLSVQWHRRPEVLCQVLL*VQAALE Trigger: TTCCAGGGCTGCTTGGACCCAAAGGAGAACCTGGCA...TAGCACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR TCA 90 bp | CAACATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGATCCCAGGAGGTCCTTaGACTCCTGGCACACCAATA | + |
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Preference number: 4 (lower is better) Translates to: QHGLAVVLSVQWHRRPEVIPGGP*TPGTPI Trigger: TATTGGTGTGCCAGGAGTTCAAGGACCTCCTGGGAT...CACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR GCA 90 bp | CAACATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGTCCAATTTCGCCTTTTaGCCCTGGCATTCCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: QHGLAVVLSVQWHRRPEVSNFAF*PWHSHG Trigger: GCCATGGGAATGCCAGGGGCAAAAGGCGAAATTGGA...CACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCTTCGCCTTTTGCCCCTaGCATTCCCATGGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPFAFCP*HSHGSW Trigger: CCAGGAGCCATGGGAATGCCAGGGGCAAAAGGCGAA...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | CATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTAAAGTCCTGCTACTCCTaGCTTCCCTACACCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: HGLAVVLSVQWHRRPEVLKSCYS*LPYTRE Trigger: TTCCCTGGTGTAGGGAAGCCAGGAGTAGCAGGACTT...TAGCACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTTGTAGGCATCACAGCTaGAGGGCCTGGGGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: YKPVSLGATPRKAVQRHACRHHS*RAWGSW Trigger: CCAGGACCCCCAGGCCCTCCAGCTGTGATGCCTACA...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR TCA 90 bp | GCTAATGAGTCCGCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGGAGGTGGCAGAGGCTTaGTTCCATAGTAGGCACCGG | + |
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Preference number: 4 (lower is better) Translates to: ANESAGYNTRVSTSSIPREVAEA*FHSRHR Trigger: CCGGTGCCTACTATGGAATCAAGCCTCTGCCACCTC...CCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGCGGACTCATTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR TCA 90 bp | CATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTAGCCCTGGTTTTCCTTTaGTTCCAGGCATTCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: HGLAVVLSVQWHRRPEVLALVFL*FQAFHD Trigger: GTCATGGAATGCCTGGAATCAAAGGAAAACCAGGGC...TAGCACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR TCA 90 bp | GCTAATGAGTCCGCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGCCGGGACTTCACAGGTaGAGATGCCTGTCTGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: ANESAGYNTRVSTSSIPRPGLHR*RCLSAD Trigger: ATCCGCAGACAGGCATCTTCACCTGTGAAGTCCCGG...CCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGCGGACTCATTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR GCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCTGGGCACCACTTCCTTaGCCATTCTTGGCACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPWAPLP*PFLAQV Trigger: CACCTGTGCCAAGAATGGGCAAGGAAGTGGTGCCCA...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | CAACATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGAGGTCCTTGAACTCCTaGCACACCAATAAGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QHGLAVVLSVQWHRRPEVRSLNS*HTNKAL Trigger: CAAGGCCTTATTGGTGTGCCAGGAGTTCAAGGACCT...CACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTAATGAGTCCGCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGGTCCCCTTTGGGTCCTaGGAAACCTGGCTTTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: ANESAGYNTRVSTSSIPRVPFGS*ETWLSD Trigger: GTCGGAAAGCCAGGTTTCCCAGGACCCAAAGGGGAC...CCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGCGGACTCATTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTTTCCCAGGGAAGCCTTaGAGGCCAGGCTCTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: YKPVSLGATPRKAVQRHAFPGKP*RPGSPL Trigger: CAAGGGAGAGCCTGGCCTCCAAGGCTTCCCTGGGAA...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | TCCTTTGGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCCAAAAGGGTCCAAGCAGCCCTaGAACACCGGGAAGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SFGLEITMDPALQKNPPKGSKQP*NTGKPW Trigger: CCAGGGCTTCCCGGTGTTCCAGGGCTGCTTGGACCC...TTTTGGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR TCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCTTGCCATACTGCATGTaGGGCATCTCCTTGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPLPYCM*GISLPM Trigger: CATGGGCAAGGAGATGCCTCACATGCAGTATGGCAA...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCGCGCTTCCAGATGCTTaGTCCAGAAAGCCCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPALPDA*SRKPFL Trigger: CAAGAAGGGCTTTCTGGACCAAGCATCTGGAAGCGC...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR TCA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTATACTCTCCCTGGGGTaGTGGTGTAGGCATCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKPVSLGATPRKAVQRHAILSLG*WCRHHS Trigger: GCTGTGATGCCTACACCATCACCCCAGGGAGAGTAT...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCTGTGAGGCATCTCCTTaGCCATGGAAAGGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPCEASP*PWKGHL Trigger: AAGATGGCCTTTCCATGGGCAAGGAGATGCCTCACA...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | GCTAATGAGTCCGCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGACGGAGAAGCAGTACTaGGCTTCCAGATGCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ANESAGYNTRVSTSSIPRTEKQY*ASRCLV Trigger: GACCAAGCATCTGGAAGCGCAGTACTGCTTCTCCGT...CCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGCGGACTCATTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | GCTAATGAGTCCGCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTGCTGGCCCAAGGGCTaGTACTGTGGAATTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ANESAGYNTRVSTSSIPRCWPKG*YCGICG Trigger: ACCACAAATTCCACAGTACCAGCCCTTGGGCCAGCA...CCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGCGGACTCATTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCATTCCTGGATATCCCTaGGGCCCTGGTTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPIPGYP*GPGFPL Trigger: CAAAGGAAAACCAGGGCCCCAGGGATATCCAGGAAT...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TCCTTTGGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCCAAAAAAGTCCATGAGGTCCTaGAGGCCCTTGTGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFGLEITMDPALQKNPPKKSMRS*RPLWPW Trigger: CCAGGGCCACAAGGGCCTCCAGGACCTCATGGACTT...TTTTGGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR TCA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATCCCGGGATCCCATCCTaGCCTGGCTTTCCAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYPGIPS*PGFPTP Trigger: TGGAGTTGGAAAGCCAGGTCAGGATGGGATCCCGGG...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCCAAGGGCTGGTACTGTaGAATTTGTGGTGGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPQGLVL*NLWWYL Trigger: CAGATACCACCACAAATTCCACAGTACCAGCCCTTG...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATAGCCCTTCTCTCCTTTaGGACCCTGAAGGCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYSPSLL*DPEGRE Trigger: CTCCCGGCCTTCAGGGTCCCAAAGGAGAGAAGGGCT...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TCCTTTGGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCCAAAACTTGTCAAACTTCACTaGGGCCCCCACCGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFGLEITMDPALQKNPPKLVKLH*GPHRWE Trigger: TTCCCACCGGTGGGGGCCCCAGTGAAGTTTGACAAG...TTTTGGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCTGTTCTGAAGGCATTTaGAGAAACACCTGGTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPCSEGI*RNTWSP Trigger: CGGAGACCAGGTGTTTCTCCAAATGCCTTCAGAACA...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR TCA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATTTGCCCAAAGGCATGTaGGGGACTTGCTGGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYLPKGM*GTCWPK Trigger: CTTGGGCCAGCAAGTCCCTCACATGCCTTTGGGCAA...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | TCCTTTGGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCCAAAACCTGATCCCCAGGTATaGCAGGTTCTCCTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGLEITMDPALQKNPPKPDPQV*QVLLWV Trigger: GACCCAAAGGAGAACCTGGCATACCTGGGGATCAGG...TTTTGGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCCTGTGGAATTTGTGGTaGTATCTGAGGAGGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPLWNLW*YLRRDL Trigger: CAAATCCCTCCTCAGATACCACCACAAATTCCACAG...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCCAGGCGGATGTTAAAGAAACAATTATCTTCCTACAACCGTAGTCCCTATTCCTGGAGGCCCTTGTaGCCCTGGGATTCCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPRRMLKKQLSSYNRSPYSWRPL*PWDSHR Trigger: CCTATGGGAATCCCAGGGCCACAAGGGCCTCCAGGA...ATAGGGACTACGGTTGTAGGAAGATAATTGTTTCTTTAACATCCGCCTGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | CTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCTGGTTTAAGGCCGGGAGGTCCTaGTGGTCCTTTGGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYLSVHFPIYVSLFSSWFKAGRS*WSFGPP Trigger: AGGGGGCCCAAAGGACCACCAGGACCTCCCGGCCTT...AAACCAGGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATAGGGCCATGCATACCTaGAGGACCCTTCAGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYRAMHT*RTLQTW Trigger: CCAGGTCTGAAGGGTCCTCCAGGTATGCATGGCCCT...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TTTATACTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCGACCCCTGGGAGGCCTaGGGGTCCAGGCAACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FILYLSVHFPIYVSLFSSDPWEA*GSRQPW Trigger: CCAGGGTTGCCTGGACCCCCAGGCCTCCCAGGGGTC...GGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAGTATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TTTATACTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCGGGCCCTGGGAGGCCTaGTTCTCCTTTGGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FILYLSVHFPIYVSLFSSGPWEA*FSFGAR Trigger: CCGGGCCCCAAAGGAGAACCAGGCCTCCCAGGGCCC...GGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAGTATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TCCTTTGGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCCAAAAAGGCATCTCATAGGCTaGCCCTCCGTGTTTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFGLEITMDPALQKNPPKRHLIG*PSVFAL Trigger: AAGGGCAAACACGGAGGGCCAGCCTATGAGATGCCT...TTTTGGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCAGGCGGATGTTAAAGAAACAATTATCTTCCTACAACCGTAGTCCCTATCACCCGGTTTCCCGATaGCAGGAAGTCCATGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPRRMLKKQLSSYNRSPYHPVSR*QEVHEV Trigger: GACCTCATGGACTTCCTGGCATCGGGAAACCGGGTG...ATAGGGACTACGGTTGTAGGAAGATAATTGTTTCTTTAACATCCGCCTGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCAGGCGGATGTTAAAGAAACAATTATCTTCCTACAACCGTAGTCCCTATGGGCCCATGAAGTCCTaGTACTCCTGGCTTCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FPRRMLKKQLSSYNRSPYGPMKS*YSWLPY Trigger: GTAGGGAAGCCAGGAGTAGCAGGACTTCATGGGCCC...ATAGGGACTACGGTTGTAGGAAGATAATTGTTTCTTTAACATCCGCCTGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCAGGCGGATGTTAAAGAAACAATTATCTTCCTACAACCGTAGTCCCTATCTGGCCCTCCGTGTTTaGCCTTTTTGCCCGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPRRMLKKQLSSYNRSPYLALRV*PFCPHR Trigger: CCTATGCGGGCAAAAAGGGCAAACACGGAGGGCCAG...ATAGGGACTACGGTTGTAGGAAGATAATTGTTTCTTTAACATCCGCCTGGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTAGGAGGGATTTGAGGTaGCAGAGGCTTGATTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: YKPVSLGATPRKAVQRHARRDLR*QRLDSI Trigger: TATGGAATCAAGCCTCTGCCACCTCAAATCCCTCCT...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATGGCAGATACTCTCCCTaGGGTGATGGTGTAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYGRYSP*GDGVGI Trigger: GATGCCTACACCATCACCCCAGGGAGAGTATCTGCC...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTGATTGTAGTTCTGTCTaGCGTTGTAGAGCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YKPVSLGATPRKAVQRHADCSSV*RCRAAC Trigger: ACAAGCTGCTCTACAACGGCAGACAGAACTACAATC...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATGCATCTCCTTGCCCATaGAAAGGCCATCTTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYASPCP*KGHLCP Trigger: TGGGCAAAGATGGCCTTTCCATGGGCAAGGAGATGC...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATGGTGTGGGTACTCTTTaGCATACTGCATGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYGVGTL*HTACEA Trigger: TGCCTCACATGCAGTATGGCAAAGAGTACCCACACC...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCAGGCGGATGTTAAAGAAACAATTATCTTCCTACAACCGTAGTCCCTATGAGCAACCCATACGTTaGCTCCCTTGCAGTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FPRRMLKKQLSSYNRSPYEQPIR*LPCSEH Trigger: ATGTTCACTGCAAGGGAGGCAACGTATGGGTTGCTC...ATAGGGACTACGGTTGTAGGAAGATAATTGTTTCTTTAACATCCGCCTGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTCATTCTTGGCACAGGTaGGATTTCCTTCATATATTG | + |
|
Preference number: 4 (lower is better) Translates to: YKPVSLGATPRKAVQRHAHSWHR*DFLHIL Trigger: CAATATATGAAGGAAATCCCACCTGTGCCAAGAATG...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | CTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCTGGTTTACCAATAAGGCCTTGTaGTCCAGGTTCCCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLSVHFPIYVSLFSSWFTNKAL*SRFPWR Trigger: CCTCCAGGGGAACCTGGACCACAAGGCCTTATTGGT...AAACCAGGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TTTATACTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCACCACCCGGAAATCCTaGTTGGCCCGGGATCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FILYLSVHFPIYVSLFSSTTRKS*LARDPI Trigger: GATGGGATCCCGGGCCAACCAGGATTTCCGGGTGGT...GGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAGTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | CCTCTTAAGGCATATTCAAAAATACCTTTACAAGGGAGCACAAAGAATGAATACTACCCCGGTCCCCTTTaGGTCCTGGGAAACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLKAYSKIPLQGSTKNEYYPGPL*VLGNLA Trigger: AGCCAGGTTTCCCAGGACCCAAAGGGGACCGGGGTA...GTATTCATTCTTTGTGCTCCCTTGTAAAGGTATTTTTGAATATGCCTTAAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR TCA 90 bp | CCTCTTAAGGCATATTCAAAAATACCTTTACAAGGGAGCACAAAGAATGAATACCCTGGCAACCCTTTGTaGCCACCTTCTCCCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKAYSKIPLQGSTKNEYPGNPL*PPSPLG Trigger: ACCCAAGGGAGAAGGTGGTCACAAAGGGTTGCCAGG...GTATTCATTCTTTGTGCTCCCTTGTAAAGGTATTTTTGAATATGCCTTAAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR GCA 90 bp | CCTCTTAAGGCATATTCAAAAATACCTTTACAAGGGAGCACAAAGAATGAATACCAGGCAAACCCCTCATaGCAGGGGGACCTACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLKAYSKIPLQGSTKNEYQANPS*QGDLLH Trigger: GTGAAGTAGGTCCCCCTGGCATGAGGGGTTTGCCTG...GTATTCATTCTTTGTGCTCCCTTGTAAAGGTATTTTTGAATATGCCTTAAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TTTATACTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCGTCCTGGTGGTCCTTTaGGCCCCCTCTCACCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FILYLSVHFPIYVSLFSSVLVVL*APSHLL Trigger: CAAAAGGTGAGAGGGGGCCCAAAGGACCACCAGGAC...GGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAGTATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | CCTCTTAAGGCATATTCAAAAATACCTTTACAAGGGAGCACAAAGAATGAATACAACACCGGGAAGCCCTaGCAACCCTTTGTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLKAYSKIPLQGSTKNEYNTGKP*QPFVTT Trigger: GGTGGTCACAAAGGGTTGCCAGGGCTTCCCGGTGTT...GTATTCATTCTTTGTGCTCCCTTGTAAAGGTATTTTTGAATATGCCTTAAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR TCA 90 bp | CTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCTGGTTTTGGGCTCGTTGTTCTTaGAGAGAGCAACCCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: LYLSVHFPIYVSLFSSWFWARCS*REQPIR Trigger: ACGTATGGGTTGCTCTCTTCAAGAACAACGAGCCCA...AAACCAGGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | CCTCTTAAGGCATATTCAAAAATACCTTTACAAGGGAGCACAAAGAATGAATACATATCCCTGGGGCCCTaGTTTTCCTTTGATTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLKAYSKIPLQGSTKNEYISLGP*FSFDSR Trigger: CCTGGAATCAAAGGAAAACCAGGGCCCCAGGGATAT...GTATTCATTCTTTGTGCTCCCTTGTAAAGGTATTTTTGAATATGCCTTAAGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS-3UTR CCA 90 bp | TTTATACTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCGTCCGATTTCCCCTTTaGGTCCAATTTCGCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FILYLSVHFPIYVSLFSSVRFPL*VQFRLL Trigger: CAAAAGGCGAAATTGGACCCAAAGGGGAAATCGGAC...GGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAGTATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS TCA 90 bp | GGTCCAAGCAGCCCTGGAACACCGGGAAGCCCTGGCAACCCTTTGTaGCCACCTTCTCCCTTGGGTCCTATAGGACCAGGCAAACCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPSSPGTPGSPGNPL*PPSPLGPIGPGKPL Trigger: GAGGGGTTTGCCTGGTCCTATAGGACCCAAGGGAGAAGGTGGTCACAAAGGGTTGCCAGGGCTTCCCGGTGTTCCAGGGCTGCTTGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS GCA 90 bp | TCCCTGGAATCCCTGGGGGACCCTGTAGACCCTGATCCCCAGGTATaGCAGGTTCTCCTTTGGGTCCAAGCAGCCCTGGAACACCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLESLGDPVDPDPQV*QVLLWVQAALEHRE Trigger: TTCCCGGTGTTCCAGGGCTGCTTGGACCCAAAGGAGAACCTGGCATACCTGGGGATCAGGGTCTACAGGGTCCCCCAGGGATTCCAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS CCA 90 bp | ACCTGGCTTTCCAACTCCAGGCATCCCAGGAGGTCCTTGAACTCCTaGCACACCAATAAGGCCTTGTGGTCCAGGTTCCCCTGGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TWLSNSRHPRRSLNS*HTNKALWSRFPWRP Trigger: GGGCCTCCAGGGGAACCTGGACCACAAGGCCTTATTGGTGTGCCAGGAGTTCAAGGACCTCCTGGGATGCCTGGAGTTGGAAAGCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS CCA 90 bp | CTGATCCCCAGGTATGCCAGGTTCTCCTTTGGGTCCAAGCAGCCCTaGAACACCGGGAAGCCCTGGCAACCCTTTGTGACCACCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIPRYARFSFGSKQP*NTGKPWQPFVTTFS Trigger: GGAGAAGGTGGTCACAAAGGGTTGCCAGGGCTTCCCGGTGTTCCAGGGCTGCTTGGACCCAAAGGAGAACCTGGCATACCTGGGGATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS CCA 90 bp | TTTACCACCCGGAAATCCTGGTTGGCCCGGGATCCCATCCTGACCTaGCTTTCCAACTCCAGGCATCCCAGGAGGTCCTTGAACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FTTRKSWLARDPILT*LSNSRHPRRSLNSW Trigger: CCAGGAGTTCAAGGACCTCCTGGGATGCCTGGAGTTGGAAAGCCAGGTCAGGATGGGATCCCGGGCCAACCAGGATTTCCGGGTGGTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS CCA 90 bp | AGGCAACCCTGGCAATCCTTGTTCCCCTTTACCACCCGGAAATCCTaGTTGGCCCGGGATCCCATCCTGACCTGGCTTTCCAACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RQPWQSLFPFTTRKS*LARDPILTWLSNSR Trigger: CCTGGAGTTGGAAAGCCAGGTCAGGATGGGATCCCGGGCCAACCAGGATTTCCGGGTGGTAAAGGGGAACAAGGATTGCCAGGGTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 90 bp | AGGTTCTCCTTTGGGTCCAAGCAGCCCTGGAACACCGGGAAGCCCTaGCAACCCTTTGTGACCACCTTCTCCCTTGGGTCCTATAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RFSFGSKQPWNTGKP*QPFVTTFSLGSYRT Trigger: GGTCCTATAGGACCCAAGGGAGAAGGTGGTCACAAAGGGTTGCCAGGGCTTCCCGGTGTTCCAGGGCTGCTTGGACCCAAAGGAGAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 90 bp | GAAAGGTACAGTCAGCTCGGCAGTAAACGCAGGCATCTCATAGGCTaGCCCTCCGTGTTTGCCCTTTTTGCCCGCATAGGCATGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERYSQLGSKRRHLIG*PSVFALFARIGMRR Trigger: CCTCCGCATGCCTATGCGGGCAAAAAGGGCAAACACGGAGGGCCAGCCTATGAGATGCCTGCGTTTACTGCCGAGCTGACTGTACCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | CAACATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGGGAGGAGTGGACATATaGCCCGGCATAGAGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QHGLAVVLSVQWHRRPEVGGVDI*PGIESS Trigger: GCTGGACTCTATGCCGGGCAATATGTCCACTCCTCC...CACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS TCA 90 bp | CGGGCTTTCCAATTCCTGGATATCCCTGGGGCCCTGGTTTTCCTTTaGTTCCAGGCATTCCATGACCTGGTAAACCTGGCGGCCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAFQFLDIPGALVFL*FQAFHDLVNLAAQV Trigger: CACCTGGGCCGCCAGGTTTACCAGGTCATGGAATGCCTGGAATCAAAGGAAAACCAGGGCCCCAGGGATATCCAGGAATTGGAAAGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS TCA 90 bp | GGAGGAGTGGACATATTGCCCGGCATAGAGTCCAGCAGCCTGTTCTaGAGGCATTTGGAGAAACACCTGGTCTCCGGGACGGAGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGVDILPGIESSSLF*RHLEKHLVSGTEKQ Trigger: CTGCTTCTCCGTCCCGGAGACCAGGTGTTTCTCCAAATGCCTTCAGAACAGGCTGCTGGACTCTATGCCGGGCAATATGTCCACTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS GCA 90 bp | GATTCCCATAGGTCCGATTTCCCCTTTGGGTCCAATTTCGCCTTTTaGCCCTGGCATTCCCATGGCTCCTGGCTTCCCAGGCATTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSHRSDFPFGSNFAF*PWHSHGSWLPRHSR Trigger: CCTGGAATGCCTGGGAAGCCAGGAGCCATGGGAATGCCAGGGGCAAAAGGCGAAATTGGACCCAAAGGGGAAATCGGACCTATGGGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 90 bp | GCCCAAAGGCATGTGAGGGACTTGCTGGCCCAAGGGCTGGTACTGTaGAATTTGTGGTGGTATCTGAGGAGGGATTTGAGGTGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQRHVRDLLAQGLVL*NLWWYLRRDLRWQR Trigger: CCTCTGCCACCTCAAATCCCTCCTCAGATACCACCACAAATTCCACAGTACCAGCCCTTGGGCCAGCAAGTCCCTCACATGCCTTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 90 bp | GCCGTTGTAGAGCAGCTTGTCAAACTTCACTGGGGCCCCCACCGGTaGGAAAGGTACAGTCAGCTCGGCAGTAAACGCAGGCATCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: AVVEQLVKLHWGPHR*ERYSQLGSKRRHLI Trigger: TATGAGATGCCTGCGTTTACTGCCGAGCTGACTGTACCTTTCCCACCGGTGGGGGCCCCAGTGAAGTTTGACAAGCTGCTCTACAACGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | GCTGGGTACAACACACGTGTCAGTACTTCATCCATACCTCGGTCCCATGATCCCGGTCCTGGTGGTCCTTaGGGCCCCCTCTCACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGYNTRVSTSSIPRSHDPGPGGP*GPLSPF Trigger: AAAAGGTGAGAGGGGGCCCAAAGGACCACCAGGACC...GGGATCATGGGACCGAGGTATGGATGAAGTACTGACACGTGTGTTGTACCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | CAACATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCATCCCAGGAGGTCCTaGAACTCCTGGCACACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QHGLAVVLSVQWHRRPEVHPRRS*NSWHTN Trigger: ATTGGTGTGCCAGGAGTTCAAGGACCTCCTGGGATG...CACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS TCA 90 bp | GGCATCTCCTTGCCCATGGAAAGGCCATCTTTGCCCAAAGGCATGTaGGGGACTTGCTGGCCCAAGGGCTGGTACTGTGGAATTTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GISLPMERPSLPKGM*GTCWPKGWYCGICG Trigger: ACCACAAATTCCACAGTACCAGCCCTTGGGCCAGCAAGTCCCTCACATGCCTTTGGGCAAAGATGGCCTTTCCATGGGCAAGGAGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | CAACATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTTCCTTGCCCATTCTaGGCACAGGTGGGATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QHGLAVVLSVQWHRRPEVLPCPF*AQVGFP Trigger: AGGAAATCCCACCTGTGCCAAGAATGGGCAAGGAAG...CACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 90 bp | GTGGGTACTCTTTGCCATACTGCATGTGAGGCATCTCCTTGCCCATaGAAAGGCCATCTTTGCCCAAAGGCATGTGAGGGACTTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGTLCHTACEASPCP*KGHLCPKACEGLAG Trigger: GCCAGCAAGTCCCTCACATGCCTTTGGGCAAAGATGGCCTTTCCATGGGCAAGGAGATGCCTCACATGCAGTATGGCAAAGAGTACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | CAACATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTGGTACTGTGGAATTaGTGGTGGTATCTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QHGLAVVLSVQWHRRPEVLVLWN*WWYLRR Trigger: CCTCCTCAGATACCACCACAAATTCCACAGTACCAG...CACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | CATGGTTTGGCTGTGGTGCTAAGCGTGCAGTGGCATCGTAGGCCTGAGGTGCTAACTCCACCTTCTCCTTaGGGTCCAGGGAAACCAATA | + |
|
Preference number: 5 (lower is better) Translates to: HGLAVVLSVQWHRRPEVLTPPSP*GPGKPI Trigger: TATTGGTTTCCCTGGACCCAAAGGAGAAGGTGGAGT...TAGCACCTCAGGCCTACGATGCCACTGCACGCTTAGCACCACAGCCAAACCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 90 bp | GTGAGGGACTTGCTGGCCCAAGGGCTGGTACTGTGGAATTTGTGGTaGTATCTGAGGAGGGATTTGAGGTGGCAGAGGCTTGATTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: VRDLLAQGLVLWNLW*YLRRDLRWQRLDSI Trigger: TATGGAATCAAGCCTCTGCCACCTCAAATCCCTCCTCAGATACCACCACAAATTCCACAGTACCAGCCCTTGGGCCAGCAAGTCCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 90 bp | ATTGTAGTTCTGTCTGCCGTTGTAGAGCAGCTTGTCAAACTTCACTaGGGCCCCCACCGGTGGGAAAGGTACAGTCAGCTCGGCAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: IVVLSAVVEQLVKLH*GPHRWERYSQLGSK Trigger: TTTACTGCCGAGCTGACTGTACCTTTCCCACCGGTGGGGGCCCCAGTGAAGTTTGACAAGCTGCTCTACAACGGCAGACAGAACTACAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TCCTTTGGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCCAAAAACCCGGAAATCCTGGTaGGCCCGGGATCCCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFGLEITMDPALQKNPPKTRKSW*ARDPIL Trigger: CAGGATGGGATCCCGGGCCAACCAGGATTTCCGGGT...TTTTGGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTATGCCAGGTTCTCCTTaGGGTCCAAGCAGCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YKPVSLGATPRKAVQRHAMPGSP*GPSSPG Trigger: TCCAGGGCTGCTTGGACCCAAAGGAGAACCTGGCAT...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS GCA 90 bp | GTAGGTGTGGGTACTCTTTGCCATACTGCATGTGAGGCATCTCCTTaGCCATGGAAAGGCCATCTTTGCCCAAAGGCATGTGAGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: VGVGTLCHTACEASP*PWKGHLCPKACEGL Trigger: AAGTCCCTCACATGCCTTTGGGCAAAGATGGCCTTTCCATGGGCAAGGAGATGCCTCACATGCAGTATGGCAAAGAGTACCCACACCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TCCTTTGGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCCAAAAAGGCATGTGAGGGACTaGCTGGCCCAAGGGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SFGLEITMDPALQKNPPKRHVRD*LAQGLV Trigger: TACCAGCCCTTGGGCCAGCAAGTCCCTCACATGCCT...TTTTGGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TCCTTTGGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCCAAAAGCCCCCTCTCACCTTTaGCTCCTGGTTGCCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SFGLEITMDPALQKNPPKAPSHL*LLVALV Trigger: TACCAGGGCAACCAGGAGCAAAAGGTGAGAGGGGGC...TTTTGGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TTCCCCAGGCGGATGTTAAAGAAACAATTATCTTCCTACAACCGTAGTCCCTATAGGCCTGGTTCTCCTTaGGGGCCCGGAATCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPRRMLKKQLSSYNRSPYRPGSP*GPGIPG Trigger: CCCTGGGATTCCGGGCCCCAAAGGAGAACCAGGCCT...ATAGGGACTACGGTTGTAGGAAGATAATTGTTTCTTTAACATCCGCCTGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATTTCTCCACGGGGACCTaGTTCTCCGCGCAAACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYFSTGT*FSAQTG Trigger: GCCAGTTTGCGCGGAGAACAAGGTCCCCGTGGAGAA...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTTGCGCTTCCAGATGCTaGGTCCAGAAAGCCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YKPVSLGATPRKAVQRHACASRC*VQKALL Trigger: AAGAAGGGCTTTCTGGACCAAGCATCTGGAAGCGCA...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | CTTCCTACAACCGTAGTCCCTATTGCTGGAAGCAACATGCCTGCTTTTGAATATTTGGGCACCACTTCCTaGCCCATTCTTGGCACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPTTVVPIAGSNMPAFEYLGTTS*PILGTG Trigger: ACCTGTGCCAAGAATGGGCAAGGAAGTGGTGCCCAA...ATATTCAAAAGCAGGCATGTTGCTTCCAGCAATAGGGACTACGGTTGTAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TTTATACTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCAAGGCCAGGCTGGCCTaGAGGCCCAAGGGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FILYLSVHFPIYVSLFSSKARLA*RPKGTR Trigger: CCTGGTGCCCTTGGGCCTCAAGGCCAGCCTGGCCTT...GGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAGTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TATAAGCCAGTGTCCTTAGGAGCGACCCCAAGGAAAGCTGTCCAAAGACATGCTTCCAGAAAGCCCTTCTaGTACTCGTCGTATGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: YKPVSLGATPRKAVQRHASRKPF*YSSYVY Trigger: GTACACATACGACGAGTACAAGAAGGGCTTTCTGGA...AGCATGTCTTTGGACAGCTTTCCTTGGGGTCGCTCCTAAGGACACTGGCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TCCTTTGGACTAGAGATTACCATGGACCCTGCACTACAGAAGAACCCTCCAAAAATGGGCTCGTTGTTCTaGAAGAGAGCAACCCATACG | + |
|
Preference number: 5 (lower is better) Translates to: SFGLEITMDPALQKNPPKMGSLF*KRATHT Trigger: CGTATGGGTTGCTCTCTTCAAGAACAACGAGCCCAT...TTTTGGAGGGTTCTTCTGTAGTGCAGGGTCCATGGTAATCTCTAGTCCAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | TTTATACTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCATACCCCGGTCCCCTTaGGGTCCTGGGAAACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FILYLSVHFPIYVSLFSSIPRSP*GPGKPG Trigger: GCCAGGTTTCCCAGGACCCAAAGGGGACCGGGGTAT...GGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAGTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | CTGTATTTATCTGTGCATTTTCCAATCTATGTCTCTCTCTTCAGCTCCTGGTTTTCTCCTTTGCCTTTTTaGGGCACCACTTCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LYLSVHFPIYVSLFSSWFSPLPF*GTTSLP Trigger: GGGCAAGGAAGTGGTGCCCAAAAAAGGCAAAGGAGA...AAACCAGGAGCTGAAGAGAGAGACATAGATTGGAAAATGCACAGATAAATACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS-3UTR CAA 90 bp | CCTCTTAAGGCATATTCAAAAATACCTTTACAAGGGAGCACAAAGAATGAATACTATCTGAGGAGGGATTaGAGGTGGCAGAGGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLKAYSKIPLQGSTKNEYYLRRD*RWQRLD Trigger: ATCAAGCCTCTGCCACCTCAAATCCCTCCTCAGATA...GTATTCATTCTTTGTGCTCCCTTGTAAAGGTATTTTTGAATATGCCTTAAGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS GCA 72 bp | GTTGCCCTGGTAACCCTGGCCCACCCGGTTTCCCGATaGCAGGAAGTCCATGAGGTCCTGGAGGCCCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VALVTLAHPVSR*QEVHEVLEALV Trigger: CACAAGGGCCTCCAGGACCTCATGGACTTCCTGGCATCGGGAAACCGGGTGGGCCAGGGTTACCAGGGCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS GCA 72 bp | AAGGGCACCAGGTTTCCCCGGGGGCCCATGAAGTCCTaGTACTCCTGGCTTCCCTACACCAGGGAACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KGTRFPRGPMKS*YSWLPYTREPR Trigger: CCTGGGTTCCCTGGTGTAGGGAAGCCAGGAGTAGCAGGACTTCATGGGCCCCCGGGGAAACCTGGTGCCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | CTTCTCTCCTTTGGGACCCTGAAGGCCGGGAGGTCCTaGTGGTCCTTTGGGCCCCCTCTCACCTTTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSFGTLKAGRS*WSFGPPLTFCS Trigger: GGAGCAAAAGGTGAGAGGGGGCCCAAAGGACCACCAGGACCTCCCGGCCTTCAGGGTCCCAAAGGAGAGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 90 bp | TTGGGGCCTGGTGGACCCTGTGGTCCTACAACTCCACCTTCTCCTTaGGGTCCAGGGAAACCAATAGCACCTGGAGGGCCCATGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LGPGGPCGPTTPPSP*GPGKPIAPGGPMGP Trigger: GGGTCCCATGGGCCCTCCAGGTGCTATTGGTTTCCCTGGACCCAAAGGAGAAGGTGGAGTTGTAGGACCACAGGGTCCACCAGGCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS TCA 72 bp | AGCCCTGGAACACCGGGAAGCCCTGGCAACCCTTTGTaGCCACCTTCTCCCTTGGGTCCTATAGGACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPGTPGSPGNPL*PPSPLGPIGPG Trigger: GCCTGGTCCTATAGGACCCAAGGGAGAAGGTGGTCACAAAGGGTTGCCAGGGCTTCCCGGTGTTCCAGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | TTTGGGTCCAAGCAGCCCTGGAACACCGGGAAGCCCTaGCAACCCTTTGTGACCACCTTCTCCCTTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FGSKQPWNTGKP*QPFVTTFSLGS Trigger: GGACCCAAGGGAGAAGGTGGTCACAAAGGGTTGCCAGGGCTTCCCGGTGTTCCAGGGCTGCTTGGACCCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS TCA 72 bp | ACGATCCCTGGAATCCCTGGGGGACCCTGTAGACCCTaGTCCCCAGGTATGCCAGGTTCTCCTTTGGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TIPGIPGGPCRP*SPGMPGSPLGP Trigger: TGGACCCAAAGGAGAACCTGGCATACCTGGGGATCAGGGTCTACAGGGTCCCCCAGGGATTCCAGGGATCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | AGGTATGCCAGGTTCTCCTTTGGGTCCAAGCAGCCCTaGAACACCGGGAAGCCCTGGCAACCCTTTGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: RYARFSFGSKQP*NTGKPWQPFVT Trigger: GGTCACAAAGGGTTGCCAGGGCTTCCCGGTGTTCCAGGGCTGCTTGGACCCAAAGGAGAACCTGGCATACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | GAGCAGCTTGTCAAACTTCACTGGGGCCCCCACCGGTaGGAAAGGTACAGTCAGCTCGGCAGTAAACGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EQLVKLHWGPHR*ERYSQLGSKRR Trigger: CCTGCGTTTACTGCCGAGCTGACTGTACCTTTCCCACCGGTGGGGGCCCCAGTGAAGTTTGACAAGCTGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 90 bp | CCCATCCTGACCTGGCTTTCCAACTCCAGGCATCCCAGGAGGTCCTaGAACTCCTGGCACACCAATAAGGCCTTGTGGTCCAGGTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PILTWLSNSRHPRRS*NSWHTNKALWSRFP Trigger: GGGGAACCTGGACCACAAGGCCTTATTGGTGTGCCAGGAGTTCAAGGACCTCCTGGGATGCCTGGAGTTGGAAAGCCAGGTCAGGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 90 bp | CAACCCTGGCAATCCTTGTTCCCCTTTACCACCCGGAAATCCTGGTaGGCCCGGGATCCCATCCTGACCTGGCTTTCCAACTCCAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QPWQSLFPFTTRKSW*ARDPILTWLSNSRH Trigger: ATGCCTGGAGTTGGAAAGCCAGGTCAGGATGGGATCCCGGGCCAACCAGGATTTCCGGGTGGTAAAGGGGAACAAGGATTGCCAGGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | TCCAACTCCAGGCATCCCAGGAGGTCCTTGAACTCCTaGCACACCAATAAGGCCTTGTGGTCCAGGTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SNSRHPRRSLNS*HTNKALWSRFP Trigger: GGGGAACCTGGACCACAAGGCCTTATTGGTGTGCCAGGAGTTCAAGGACCTCCTGGGATGCCTGGAGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | TGGCAATCCTTGTTCCCCTTTACCACCCGGAAATCCTaGTTGGCCCGGGATCCCATCCTGACCTGGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WQSLFPFTTRKS*LARDPILTWLS Trigger: GGAAAGCCAGGTCAGGATGGGATCCCGGGCCAACCAGGATTTCCGGGTGGTAAAGGGGAACAAGGATTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS CCA 72 bp | AGTCAGCTCGGCAGTAAACGCAGGCATCTCATAGGCTaGCCCTCCGTGTTTGCCCTTTTTGCCCGCATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SQLGSKRRHLIG*PSVFALFARIG Trigger: GCCTATGCGGGCAAAAAGGGCAAACACGGAGGGCCAGCCTATGAGATGCCTGCGTTTACTGCCGAGCTGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
||
| CDS CCA 72 bp | CTGTCTGCCGTTGTAGAGCAGCTTGTCAAACTTCACTaGGGCCCCCACCGGTGGGAAAGGTACAGTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LSAVVEQLVKLH*GPHRWERYSQL Trigger: GAGCTGACTGTACCTTTCCCACCGGTGGGGGCCCCAGTGAAGTTTGACAAGCTGCTCTACAACGGCAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS TCA 72 bp | TTGCCCATGGAAAGGCCATCTTTGCCCAAAGGCATGTaGGGGACTTGCTGGCCCAAGGGCTGGTACTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LPMERPSLPKGM*GTCWPKGWYCG Trigger: TCCACAGTACCAGCCCTTGGGCCAGCAAGTCCCTCACATGCCTTTGGGCAAAGATGGCCTTTCCATGGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS GCA 72 bp | GCATCTCATAGGCTGGCCCTCCGTGTTTGCCCTTTTTaGCCGCATAGGCATGCGGAGGTTTCACCCCATCAA | + |
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Preference number: 6 (lower is better) Translates to: ASHRLALRVCPF*PHRHAEVSPHQ Trigger: TTGATGGGGTGAAACCTCCGCATGCCTATGCGGGCAAAAAGGGCAAACACGGAGGGCCAGCCTATGAGATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | CCAGCAGCCTGTTCTGAAGGCATTTGGAGAAACACCTaGTCTCCGGGACGGAGAAGCAGTACTGCGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PAACSEGIWRNT*SPGRRSSTALP Trigger: TGGAAGCGCAGTACTGCTTCTCCGTCCCGGAGACCAGGTGTTTCTCCAAATGCCTTCAGAACAGGCTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 72 bp | CAATCCTTGTTCCCCTTTACCACCCGGAAATCCTGGTaGGCCCGGGATCCCATCCTGACCTGGCTTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: QSLFPFTTRKSW*ARDPILTWLSN Trigger: GTTGGAAAGCCAGGTCAGGATGGGATCCCGGGCCAACCAGGATTTCCGGGTGGTAAAGGGGAACAAGGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS TCA 72 bp | GACATATTGCCCGGCATAGAGTCCAGCAGCCTGTTCTaGAGGCATTTGGAGAAACACCTGGTCTCCGGGACG | + |
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Preference number: 6 (lower is better) Translates to: DILPGIESSSLF*RHLEKHLVSGT Trigger: CGTCCCGGAGACCAGGTGTTTCTCCAAATGCCTTCAGAACAGGCTGCTGGACTCTATGCCGGGCAATATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS GCA 72 bp | GAGAAACACCTGGTCTCCGGGACGGAGAAGCAGTACTaGGCTTCCAGATGCTTGGTCCAGAAAGCCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: EKHLVSGTEKQY*ASRCLVQKALL Trigger: AAGAAGGGCTTTCTGGACCAAGCATCTGGAAGCGCAGTACTGCTTCTCCGTCCCGGAGACCAGGTGTTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | CCCAGGCATTCCAGGCATACCGGGCTTTCCAATTCCTaGATATCCCTGGGGCCCTGGTTTTCCTTTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: PRHSRHTGLSNS*ISLGPWFSFDS Trigger: GGAATCAAAGGAAAACCAGGGCCCCAGGGATATCCAGGAATTGGAAAGCCCGGTATGCCTGGAATGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 72 bp | AGGGACTTGCTGGCCCAAGGGCTGGTACTGTGGAATTaGTGGTGGTATCTGAGGAGGGATTTGAGGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RDLLAQGLVLWN*WWYLRRDLRWQ Trigger: CTGCCACCTCAAATCCCTCCTCAGATACCACCACAAATTCCACAGTACCAGCCCTTGGGCCAGCAAGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 72 bp | GGAAAGGCCATCTTTGCCCAAAGGCATGTGAGGGACTaGCTGGCCCAAGGGCTGGTACTGTGGAATTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GKAIFAQRHVRD*LAQGLVLWNLW Trigger: CCACAAATTCCACAGTACCAGCCCTTGGGCCAGCAAGTCCCTCACATGCCTTTGGGCAAAGATGGCCTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 90 bp | AGGCATGTGAGGGACTTGCTGGCCCAAGGGCTGGTACTGTGGAATTaGTGGTGGTATCTGAGGAGGGATTTGAGGTGGCAGAGGCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: RHVRDLLAQGLVLWN*WWYLRRDLRWQRLD Trigger: ATCAAGCCTCTGCCACCTCAAATCCCTCCTCAGATACCACCACAAATTCCACAGTACCAGCCCTTGGGCCAGCAAGTCCCTCACATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 90 bp | CTTGCCCATGGAAAGGCCATCTTTGCCCAAAGGCATGTGAGGGACTaGCTGGCCCAAGGGCTGGTACTGTGGAATTTGTGGTGGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: LAHGKAIFAQRHVRD*LAQGLVLWNLWWYL Trigger: CAGATACCACCACAAATTCCACAGTACCAGCCCTTGGGCCAGCAAGTCCCTCACATGCCTTTGGGCAAAGATGGCCTTTCCATGGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | TTGCTGGCCCAAGGGCTGGTACTGTGGAATTTGTGGTaGTATCTGAGGAGGGATTTGAGGTGGCAGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLAQGLVLWNLW*YLRRDLRWQRL Trigger: AAGCCTCTGCCACCTCAAATCCCTCCTCAGATACCACCACAAATTCCACAGTACCAGCCCTTGGGCCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | CATGTGAGGGACTTGCTGGCCCAAGGGCTGGTACTGTaGAATTTGTGGTGGTATCTGAGGAGGGATTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: HVRDLLAQGLVL*NLWWYLRRDLR Trigger: CCTCAAATCCCTCCTCAGATACCACCACAAATTCCACAGTACCAGCCCTTGGGCCAGCAAGTCCCTCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | CCAGGCATACCGGGCTTTCCAATTCCTGGATATCCCTaGGGCCCTGGTTTTCCTTTGATTCCAGGCATTCCA | + |
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Preference number: 6 (lower is better) Translates to: PGIPGFPIPGYP*GPGFPLIPGIP Trigger: TGGAATGCCTGGAATCAAAGGAAAACCAGGGCCCCAGGGATATCCAGGAATTGGAAAGCCCGGTATGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | TCAATTCCTAGTCCCATATCTGGCAGATACTCTCCCTaGGGTGATGGTGTAGGCATCACAGCTGGAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SIPSPISGRYSP*GDGVGITAGGP Trigger: AGGCCCTCCAGCTGTGATGCCTACACCATCACCCCAGGGAGAGTATCTGCCAGATATGGGACTAGGAATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS TCA 72 bp | CAATTCCTGGATATCCCTGGGGCCCTGGTTTTCCTTTaGTTCCAGGCATTCCATGACCTGGTAAACCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: QFLDIPGALVFL*FQAFHDLVNLA Trigger: CGCCAGGTTTACCAGGTCATGGAATGCCTGGAATCAAAGGAAAACCAGGGCCCCAGGGATATCCAGGAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 90 bp | CAAGGGCTGGTACTGTGGAATTTGTGGTGGTATCTGAGGAGGGATTaGAGGTGGCAGAGGCTTGATTCCATAGTAGGCACCGGCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: QGLVLWNLWWYLRRD*RWQRLDSIVGTGLN Trigger: ATTCAGGCCGGTGCCTACTATGGAATCAAGCCTCTGCCACCTCAAATCCCTCCTCAGATACCACCACAAATTCCACAGTACCAGCCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS GCA 72 bp | GGTACTCTTTGCCATACTGCATGTGAGGCATCTCCTTaGCCATGGAAAGGCCATCTTTGCCCAAAGGCATGT | + |
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Preference number: 6 (lower is better) Translates to: GTLCHTACEASP*PWKGHLCPKAC Trigger: ACATGCCTTTGGGCAAAGATGGCCTTTCCATGGGCAAGGAGATGCCTCACATGCAGTATGGCAAAGAGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 72 bp | ACTGCGCTTCCAGATGCTTGGTCCAGAAAGCCCTTCTaGTACTCGTCGTATGTGTACATCATGGGCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: TALPDAWSRKPF*YSSYVYIMGSL Trigger: CAACGAGCCCATGATGTACACATACGACGAGTACAAGAAGGGCTTTCTGGACCAAGCATCTGGAAGCGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS TCA 72 bp | ACTCGTCGTATGTGTACATCATGGGCTCGTTGTTCTTaGAGAGAGCAACCCATACGTTGCCTCCCTTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TRRMCTSWARCS*REQPIRCLPCS Trigger: ACTGCAAGGGAGGCAACGTATGGGTTGCTCTCTTCAAGAACAACGAGCCCATGATGTACACATACGACGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 72 bp | GTACTGTGGAATTTGTGGTGGTATCTGAGGAGGGATTaGAGGTGGCAGAGGCTTGATTCCATAGTAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: VLWNLWWYLRRD*RWQRLDSIVGT Trigger: GGTGCCTACTATGGAATCAAGCCTCTGCCACCTCAAATCCCTCCTCAGATACCACCACAAATTCCACAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CAA 72 bp | TACTCGTCGTATGTGTACATCATGGGCTCGTTGTTCTaGAAGAGAGCAACCCATACGTTGCCTCCCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: YSSYVYIMGSLF*KRATHTLPPLQ Trigger: CTGCAAGGGAGGCAACGTATGGGTTGCTCTCTTCAAGAACAACGAGCCCATGATGTACACATACGACGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS GCA 72 bp | TTTCCTTCATATATTGGGGTAGGTGTGGGTACTCTTTaGCATACTGCATGTGAGGCATCTCCTTGCCCATGG | + |
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Preference number: 6 (lower is better) Translates to: FPSYIGVGVGTL*HTACEASPCPW Trigger: CCATGGGCAAGGAGATGCCTCACATGCAGTATGGCAAAGAGTACCCACACCTACCCCAATATATGAAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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| CDS CCA 72 bp | CCCATTCTTGGCACAGGTGGGATTTCCTTCATATATTaGGGTAGGTGTGGGTACTCTTTGCCATACTGCATG | + |
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Preference number: 6 (lower is better) Translates to: PILGTGGISFIY*GRCGYSLPYCM Trigger: CATGCAGTATGGCAAAGAGTACCCACACCTACCCCAATATATGAAGGAAATCCCACCTGTGCCAAGAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089332.5 |
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