RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL7A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025650

Ensembl transcript IDs: ENSMUST00000026740.6, ENSMUST00000112070.8

Found 635 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTaGGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCA +
Preference number: 1 (lower is better)
Translates to: CTHNSSTKWSTAGPG*DPATSRDCWPPSAS
Trigger: TGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
3UTR GCA 90 bp GCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTaGCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGG +
Preference number: 1 (lower is better)
Translates to: ASGQGAGWTPVTSIH*PQPPPTVSHLPGKR
Trigger: CCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
3UTR-3UTR TCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAACAGCAGGACCCGGCTaGGACCCTGCCACCTCCAGG +
Preference number: 2 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSTAGPG*DPATSR
Trigger: CCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGT...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
3UTR-3UTR TCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGACAGCAGGACCCGGCTaGGACCCTGCCACCTCCAGG +
Preference number: 2 (lower is better)
Translates to: NSESSARKAGATMGICPWTAGPG*DPATSR
Trigger: CCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGT...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
3UTR-3UTR GCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAGCCACCTCCAGGGACTaGTGGCCACCAAGCGCATCA +
Preference number: 2 (lower is better)
Translates to: PNSESSARKAGATMGICPATSRD*WPPSAS
Trigger: TGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGC...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
3UTR-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAAACTCTAGCACCAAATaGAGCACAGCAGGACCCGGC +
Preference number: 2 (lower is better)
Translates to: PNSESSARKAGATMGICPNSSTK*STAGPG
Trigger: GCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
3UTR-3UTR GCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAGTGGACATGCTCATGTaGACACACAATATACATGCT +
Preference number: 2 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQVDMLM*THNIHA
Trigger: AGCATGTATATTGTGTGTGCACATGAGCATGTCCAC...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
3UTR-3UTR GCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGTGGACATGCTCATGTaGACACACAATATACATGCT +
Preference number: 2 (lower is better)
Translates to: GITASGQGAGWTPVTSIHVDMLM*THNIHA
Trigger: AGCATGTATATTGTGTGTGCACATGAGCATGTCCAC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
3UTR TCA 72 bp AACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTaGGACCCTGCCACCTCCAGGGACTGCTGGCCACCA +
Preference number: 3 (lower is better)
Translates to: NSSTKWSTAGPG*DPATSRDCWPP
Trigger: TGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCCAGGAGCCCCAGACTaGCCCGGCAGACCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSPGAPD*PGRPGS
Trigger: GGAGCCTGGTCTGCCGGGTCAGTCTGGGGCTCCTGG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCCTTCCTGCTTCCCCTaGACCACCAGCCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSPSCFP*TTSPAW
Trigger: CCAGGCCGGGCTGGTGGTTCAGGGGAAGCAGGAAGG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGGGGCTCAGGTCCTGCTaGTGGGTTGGCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKGLRSC*WVGPPL
Trigger: CAGTGGTGGGCCAACCCAGCAGCAGGACCTGAGCCC...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGGCCAAGCGACGCAGCTaGTCTGGGTCAGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKAKRRS*SGSAPT
Trigger: GGTGGGAGCTGACCCAGAGCAGCTGCGTCGCTTGGC...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCCCTGGCAGTGTCTGTaGGGCCCTCGGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKPWQCL*GPRHFL
Trigger: CAGGAAGTGCCGAGGGCCCCACAGACACTGCCAGGG...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGCCAGTGGGTCCTGGTaGCCCCTCAGGACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSASGSW*PLRTLH
Trigger: GTGGAGGGTCCTGAGGGGCCACCAGGACCCACTGGC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGGGCACCTTCTCTCCCTaGAGGGCCTGCCAGACCCCT +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKGTFSP*RACQTP
Trigger: AGGGGTCTGGCAGGCCCTCCAGGGAGAGAAGGTGCC...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCTCCAGGAAAGCCGATaGGGCCCTCCTTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKLQESR*GPPCLE
Trigger: CTCCAGGCAAGGAGGGCCTCATCGGCTTTCCTGGAG...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGTCCCCCTTGGGCCCTaGAGACCCGGCTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSVPLGP*RPGFPS
Trigger: TGAAGGGAAGCCGGGTCTTCAGGGCCCAAGGGGGAC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGCCAAGCGACGCAGCTaGTCTGGGTCAGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSAKRRS*SGSAPT
Trigger: GGTGGGAGCTGACCCAGAGCAGCTGCGTCGCTTGGC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATGTCACCCTTGAGCCCTaGAGCGCCAGCAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHVTLEP*SASSAL
Trigger: AAGGGCGCTGCTGGCGCTGCAGGGCTCAAGGGTGAC...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCTCTCTCTCCAGGGGTaGCAGGAGCACCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSLSLQG*QEHQEP
Trigger: GGGCTCCTGGTGCTCCTGGCACCCCTGGAGAGAGAG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCTTCAATGGCCACCTTaGGGCCAGGAGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKLQWPP*GQEGQV
Trigger: CACCTGGCCCTCCTGGCCCCAAGGTGGCCATTGAAG...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGGCACCTTCTCTCCCTaGAGGGCCTGCCAGACCCCT +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSGTFSP*RACQTP
Trigger: AGGGGTCTGGCAGGCCCTCCAGGGAGAGAAGGTGCC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCCCCTTGGCACCCTTaGGTCCAGGAGGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHPPWHP*VQEVLA
Trigger: AGCAAGGACCTCCTGGACTCAAGGGTGCCAAGGGGG...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGTCCCCCTTGGGCCCTaGAGACCCGGCTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTVPLGP*RPGFPS
Trigger: TGAAGGGAAGCCGGGTCTTCAGGGCCCAAGGGGGAC...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTCCAGGGCTCAGGTCCTaGTGCTGGGTTGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTPGLRS*CWVGPP
Trigger: TGGTGGGCCAACCCAGCAGCAGGACCTGAGCCCTGG...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATTGGCCACCCTCAGGTTaGCAGTGCAGGCGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHWPPSG*QCRRKP
Trigger: AGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGCCA...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGGTCCTGGTCGTCCCTaGTCTCCTCTCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSGPGRP*SPLSPG
Trigger: CCCTGGAGAGAGAGGAGAGCAGGGACGACCAGGACC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGAGCCCTGTCACTCTGTaGGAGCTTGAGGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKSPVTL*ELEVPG
Trigger: GCCAGGGACCTCAAGCTCCCACAGAGTGACAGGGCT...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTACCCGGCTCCCCCTTTaGACCTTGAGGCCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSTRLPL*TLRPSF
Trigger: GAACGAGGGCCTCAAGGTCCAAAGGGGGAGCCGGGT...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCACTCCTCGGCGGCCAGTaGGTCCTGGTGGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPLLGGQ*VLVAPQ
Trigger: CTGAGGGGCCACCAGGACCCACTGGCCGCCGAGGAG...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGGGGCCAACAGGTCCTaGGGAACCAGGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTGANRS*GTRSTR
Trigger: CCTGGTCGACCTGGTTCCCCAGGACCTGTTGGCCCC...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAGTCTCCCTGTGGGCCTaGGGGTCCCCGAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQVSLWA*GSPKPI
Trigger: GATGGGCTTCGGGGACCCCCAGGCCCACAGGGAGAC...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTACGGCCTGGAGGTCCTaGCTTCCCTGTCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTTAWRS*LPCLPH
Trigger: GTGGGGGAGACAGGGAAGCCAGGACCTCCAGGCCGT...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATGCTACCGTCACGGCCTaGAGGTCCTGGCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHATVTA*RSWLPC
Trigger: ACAGGGAAGCCAGGACCTCCAGGCCGTGACGGTAGC...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCACCCATATCCCCTTTaGCACCTCGTGGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSHPYPL*HLVARE
Trigger: CTCCCGGGCCACGAGGTGCCAAAGGGGATATGGGTG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGGGGCCAGCAGGTCCTaGTCGTCCCTGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTGASRS*SSLLSS
Trigger: AGAGGAGAGCAGGGACGACCAGGACCTGCTGGCCCC...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGCAGGGCCGACACCTTaGTGCCAGCAGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSAGPTP*CQQFPA
Trigger: TGCTGGAAACTGCTGGCATCAAGGTGTCGGCCCTGC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCTCCCTTGGGTCCTGTaGGTCCTCGAACTCCAATCG +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKLPWVL*VLELQS
Trigger: CGATTGGAGTTCGAGGACTCACAGGACCCAAGGGAG...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACCAGGAGCCCCAGACTaGCCCGGCAGACCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSPGAPD*PGRPGS
Trigger: GGAGCCTGGTCTGCCGGGTCAGTCTGGGGCTCCTGG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATTCCCATCAGGATCTCTaGAGCGCAGAGCGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHSHQDL*SAERSD
Trigger: GTCGCTGCGCTCTGCGCTGCAGAGATCCTGATGGGA...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCCTGGAGTCCAGGATTaGCAGGAGCTCCACGTTCAC +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKPGVQD*QELHVH
Trigger: GTGAACGTGGAGCTCCTGGCAATCCTGGACTCCAGG...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATGTCAGGGACTGTTCCTaGCCACCCTCAGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHVRDCS*PPSGCQ
Trigger: CTGGCAACCTGAGGGTGGCCAGGAACAGTCCCTGAC...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGTTCTCCTCGAAGGCCTaGAAGTCCATCTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKFSSKA*KSISPR
Trigger: CCGGGGAGAGATGGACTTCCAGGCCTTCGAGGAGAA...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATAGACCCGGAGGACCCTaGAGTCCAGGATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHRPGGP*SPGLPG
Trigger: TCCTGGCAATCCTGGACTCCAGGGTCCTCCGGGTCT...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAAGGCCAGAAGGCCCCTaGGGTCCCGCAGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSRPEGP*GPAGPA
Trigger: TGCTGGCCCTGCGGGACCCCAGGGGCCTTCTGGCCT...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAACGGCCTGGAGGTCCTaGCTTCCCTGTCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQTAWRS*LPCLPH
Trigger: GTGGGGGAGACAGGGAAGCCAGGACCTCCAGGCCGT...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCCACGAGGTCCTTCCTaGCCAGGGTGGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSPRGPS*PGWPSS
Trigger: TGAAGATGGCCACCCTGGCCAGGAAGGACCTCGTGG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTTGCAAACCATCCAGCTaGTGGCGGGTCACATCAGGG +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSCKPSS*WRVTSG
Trigger: CCCTGATGTGACCCGCCATCAGCTGGATGGTTTGCA...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTCACTCTGTGGGAGCTTaGGGTCCCTGGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTHSVGA*GPWQCL
Trigger: CAGACACTGCCAGGGACCTCAAGCTCCCACAGAGTG...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACCTTCCTGCTTCCCCTaGACCACCAGCCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSPSCFP*TTSPAW
Trigger: CCAGGCCGGGCTGGTGGTTCAGGGGAAGCAGGAAGG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCTTCCTCCTCAACATaGGAGACCCGGAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHPSSST*ETRSTG
Trigger: TCCTGTGCTCCGGGTCTCTCATGTTGAGGAGGAAGG...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCGCCCTGCTCTCCTTTaGTTCCAGAAGCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHRPALL*FQKLLW
Trigger: CCAGAGGAGCTTCTGGAAGCAAAGGAGAGCAGGGCG...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGAAGAGCCAATCCAGGTaGGCCCTGCTCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKKSQSR*ALLSFA
Trigger: AGCAAAGGAGAGCAGGGCGCACCTGGATTGGCTCTT...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTCCGGGTCCCCAGCTTTaGCTGAAGCACCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTPGPQL*LKHHVA
Trigger: GGCTACATGGTGCTTCAGGCAAAGCTGGGGACCCGG...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATGCACCGGTAGGAAGCTaGCAGAACTCTCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHAPVGS*QNSHPR
Trigger: CCTGGGATGAGAGTTCTGGCAGCTTCCTACCGGTGC...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTGCGCCCTTCTCTCCTTaGTCTCCCCGGCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPAPFSP*SPRLPG
Trigger: CCCTGGCAGCCGGGGAGAGCAAGGAGAGAAGGGCGC...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCTTTGTCACCATCTATaGCCCGAGGCCCTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKLCHHL*PEALVH
Trigger: GTGAACGAGGGCCTCGGGGCATAGATGGTGACAAAG...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATAGGGATGACAGGCTGTaGCACCAGGCACAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHRDDRL*HQAQLD
Trigger: ATCGAGCTGTGCCTGGTGGCACAGCCTGTCATCCCT...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCACTGTACTGCACTGTaGCAAACCGGACGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHHCTAL*QTGRPV
Trigger: CACAGGGCGTCCGGTTTGCCACAGTGCAGTACAGTG...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCACCACGGTTGCAGGAGTaGCCACCTCACGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPPRLQE*PPHGPP
Trigger: TGGAGGGCCGTGAGGTGGCCACTCCTGCAACCGTGG...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTAGTGGCCCCAGGGACTaGGTTCCAAGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTSGPRD*VPRHSH
Trigger: GTGCGAGTGTCTTGGAACCCAGTCCCTGGGGCCACT...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGTTAAGCCCAGAAGTCTaGGCCTCACGAATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKLSPEV*ASRMGL
Trigger: CAGCCCCATTCGTGAGGCCCAGACTTCTGGGCTTAA...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGAGGACCTTGCGGGCCTaGAGCACCGGTCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGRTLRA*STGPAR
Trigger: CCGGGCAGGACCGGTGCTCCAGGCCCGCAAGGTCCT...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGGCCAGTGGGTCCTGGTaGCCCCTCAGGACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLASGSW*PLRTLH
Trigger: GTGGAGGGTCCTGAGGGGCCACCAGGACCCACTGGC...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACCTCCTCGGCGGCCAGTaGGTCCTGGTGGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHLLGGQ*VLVAPQ
Trigger: CTGAGGGGCCACCAGGACCCACTGGCCGCCGAGGAG...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATTCCAGAAGCTCCTCTaGGCCCAGGGAGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQFQKLL*AQGAQP
Trigger: AGGCTGGGCTCCCTGGGCCCAGAGGAGCTTCTGGAA...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCGGCCATCCAGCCCTaGGGGTCCCCGATCACCCTT +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPPAIQP*GSPITL
Trigger: AAGGGTGATCGGGGACCCCCAGGGCTGGATGGCCGG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTAGACCCGGAGGACCCTaGAGTCCAGGATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTRPGGP*SPGLPG
Trigger: TCCTGGCAATCCTGGACTCCAGGGTCCTCCGGGTCT...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTAGCCAGTCCAGGGCCTaGCTCTTCAATGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSSQSRA*LFNGHL
Trigger: AAGGTGGCCATTGAAGAGCCAGGCCCTGGACTGGCT...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAAGGCAGACCCCGTCCTaGAGGTCCTGTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQRQTPS*RSCLSR
Trigger: CCTGGAGAGACAGGACCTCCAGGACGGGGTCTGCCT...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAGTCCTCGGTCACCTTTaGCTCCCGGCTCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQVLGHL*LPAHPA
Trigger: TGCTGGGTGAGCCGGGAGCCAAAGGTGACCGAGGAC...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCACCAACAGGCCCTGGCTaGCCCGTCTCTCCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPPTGPG*PVSPRG
Trigger: ACCTCGAGGAGAGACGGGCCAGCCAGGGCCTGTTGG...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGTGGCTGTGGACCCCTTaGGGTGGGCAGCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLWLWTP*GGQRRS
Trigger: TGAGCGCCGCTGCCCACCCCAAGGGGTCCACAGCCA...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCATGCACTGGCTGCTCCTaGGAAAGGCAGCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPCTGCS*ERQHQP
Trigger: GGGCTGGTGCTGCCTTTCTCAGGAGCAGCCAGTGCA...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGATGTCGGGCTCAAGATaGTGGGATGCAGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKMSGSR*WDAGFA
Trigger: AGCAAACCCTGCATCCCATCATCTTGAGCCCGACAT...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCACTGGCATCACCCTCCTaGGCACCCACTCGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPLASPS*APTRAD
Trigger: GTCTGCTCGAGTGGGTGCTCAGGAGGGTGATGCCAG...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGGTGATGCTGACAGATaGGCTGCCAGCCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSGDADR*AASLSQ
Trigger: TTGACTCAGGCTGGCAGCTCATCTGTCAGCATCACC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATTCAGTGCTCGGGATGTaGGAGGGCTCAGTGTATGCA +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHSVLGM*EGSVYA
Trigger: TGCATACACTGAGCCCTCTCACATCCCGAGCACTGA...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGCTAAGAGGTATCTGTaGGCTGTGGTCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSAKRYL*AVVTAV
Trigger: CACAGCCGTGACCACAGCTCACAGATACCTCTTAGC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGGACCCTGGAGACGCGTaGTGGTCTCACCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLDPGDA*WSHQPG
Trigger: TCCCGGCTGGTGAGACCAGCACGCGTCTCCAGGGTC...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGGGCTCAGGTCCTGCTaGTGGGTTGGCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSGLRSC*WVGPPL
Trigger: CAGTGGTGGGCCAACCCAGCAGCAGGACCTGAGCCC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACCAGGGCTCAGGTCCTaGTGCTGGGTTGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSPGLRS*CWVGPP
Trigger: TGGTGGGCCAACCCAGCAGCAGGACCTGAGCCCTGG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCCTCCTCACAGCCTCTaGGTTGTGAGCATTGTCTCG +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSPPHSL*VVSIVS
Trigger: CGAGACAATGCTCACAACGCAGAGGCTGTGAGGAGG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTACCAAGAGGCCCAAGTaGAGACACCAGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSTKRPK*RHQPFQ
Trigger: CTGGAAAGGCTGGTGTCTGCACTTGGGCCTCTTGGT...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTTGGCCCTTTGGACAGTaGACAGCACAAGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSWPFGQ*TAQGPV
Trigger: AACAGGGCCTTGTGCTGTGCACTGTCCAAAGGGCCA...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAGCGCCCTTCTCTCCTTaGTCTCCCCGGCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPAPFSP*SPRLPG
Trigger: CCCTGGCAGCCGGGGAGAGCAAGGAGAGAAGGGCGC...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCCTTGGGTCCTGACTaGCCATCAAAGCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHPLGPD*PSKPLS
Trigger: TGACAGAGGCTTTGATGGGCAGTCAGGACCCAAGGG...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCTCTCTCTCCAGGGGTaGCAGGAGCACCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPLSLQG*QEHQEP
Trigger: GGGCTCCTGGTGCTCCTGGCACCCCTGGAGAGAGAG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTAGGGATGACAGGCTGTaGCACCAGGCACAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTRDDRL*HQAQLD
Trigger: ATCGAGCTGTGCCTGGTGGCACAGCCTGTCATCCCT...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTAGGTCACTCTATCTCTaGGCTGGGCCCACACTTCCG +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTRSLYL*AGPTLP
Trigger: CGGAAGTGTGGGCCCAGCCCAGAGATAGAGTGACCT...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTGCAGGCCCCACGCTGTaGCCAAATAGGGCGCTCACG +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPAGPTL*PNRALT
Trigger: CGTGAGCGCCCTATTTGGCCACAGCGTGGGGCCTGC...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAAGTGGCCCCAGGGACTaGGTTCCAAGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQSGPRD*VPRHSH
Trigger: GTGCGAGTGTCTTGGAACCCAGTCCCTGGGGCCACT...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCCTCACTGGGCCCAGTaGATCAGTTCTAGCCACGAT +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSPHWAQ*ISSSHD
Trigger: ATCGTGGCTAGAACTGATCCACTGGGCCCAGTGAGG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAGTCAGGGACTGTTCCTaGCCACCCTCAGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQVRDCS*PPSGCQ
Trigger: CTGGCAACCTGAGGGTGGCCAGGAACAGTCCCTGAC...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGCCCTCGGCACTTCCTaGCCAGTTCCTCTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSALGTS*PVPLSG
Trigger: GCCGCTCAGAGGAACTGGCCAGGAAGTGCCGAGGGC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAAGCCCTGTCACTCTGTaGGAGCTTGAGGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQSPVTL*ELEVPG
Trigger: GCCAGGGACCTCAAGCTCCCACAGAGTGACAGGGCT...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGGTATCTGTGAGCTGTaGTCACGGCTGTGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTGICEL*SRLCRG
Trigger: ACCTCGGCACAGCCGTGACCACAGCTCACAGATACC...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAGCGACGCAGCTGCTCTaGGTCAGCTCCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQATQLL*VSSHQT
Trigger: AGTTTGGTGGGAGCTGACCCAGAGCAGCTGCGTCGC...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTGGGGCCAACAGGTCCTaGGGAACCAGGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPGANRS*GTRSTR
Trigger: CCTGGTCGACCTGGTTCCCCAGGACCTGTTGGCCCC...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAGTCTCCCTGTGGGCCTaGGGGTCCCCGAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPVSLWA*GSPKPI
Trigger: GATGGGCTTCGGGGACCCCCAGGCCCACAGGGAGAC...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAACCCTTGTCTCCTGCTaGGCCTCGAACACCGGGGTC +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPTLVSC*ASNTGV
Trigger: GACCCCGGTGTTCGAGGCCCAGCAGGAGACAAGGGT...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACCGGCCATCCAGCCCTaGGGGTCCCCGATCACCCTT +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPPAIQP*GSPITL
Trigger: AAGGGTGATCGGGGACCCCCAGGGCTGGATGGCCGG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCACTTCAATGGCCACCTTaGGGCCAGGAGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPLQWPP*GQEGQV
Trigger: CACCTGGCCCTCCTGGCCCCAAGGTGGCCATTGAAG...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGCCTGGCTCTTCAATaGCCACCTTGGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPGLALQ*PPWGQE
Trigger: CTCCTGGCCCCAAGGTGGCCATTGAAGAGCCAGGCC...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTGGTCCAGGGTCTCCATaGCTACCCACTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPGPGSP*LPTGPG
Trigger: CCCTGGCCCAGTGGGTAGCCATGGAGACCCTGGACC...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGAGGCCAGAAGGCCCCTaGGGTCCCGCAGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWRPEGP*GPAGPA
Trigger: TGCTGGCCCTGCGGGACCCCAGGGGCCTTCTGGCCT...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAACCTGGAGAGCCTTGTaGACCCACGAGGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPTWRAL*THEAGR
Trigger: CCTTCCGGCCTCGTGGGTCCACAAGGCTCTCCAGGT...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCATGGTCCCAAGGGACCTaGGGCACCTTCTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPWSQGT*GTFSPW
Trigger: CCAGGGAGAGAAGGTGCCCCAGGTCCCTTGGGACCA...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAACCACGAGGTCCTTCCTaGCCAGGGTGGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQPRGPS*PGWPSS
Trigger: TGAAGATGGCCACCCTGGCCAGGAAGGACCTCGTGG...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTTCCCCTTTCTCGCCTTaGTCACCCTTGGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTSPFSP*SPLGPD
Trigger: GTCAGGACCCAAGGGTGACCAAGGCGAGAAAGGGGA...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGCTGTGGACCCCTTaGGGTGGGCAGCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHWLWTP*GGQRRS
Trigger: TGAGCGCCGCTGCCCACCCCAAGGGGTCCACAGCCA...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTTACCACCTTTATAGCTaGGCTCACGGATGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSYHLYS*AHGWLG
Trigger: TCCGAGCCATCCGTGAGCTCAGCTATAAAGGTGGTA...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCTGGCATCACCCTCCTaGGCACCCACTCGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPLASPS*APTRAD
Trigger: GTCTGCTCGAGTGGGTGCTCAGGAGGGTGATGCCAG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGTCCTGCCCTTCCAGTaGGGCCAATGGGACCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSVLPFQ*GQWDPC
Trigger: ACAGGGGTCCCATTGGCCTCACTGGAAGGGCAGGAC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCCCCTTGGCACCCTTaGGTCCAGGAGGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPPPWHP*VQEVLA
Trigger: AGCAAGGACCTCCTGGACTCAAGGGTGCCAAGGGGG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGCACCCTTGTCACCCTTaGGCCCTGCAGCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGHPCHP*ALQRQQ
Trigger: CTGCTGGCGCTGCAGGGCTCAAGGGTGACAAGGGTG...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAACTCCCTTGGGTCCTGTaGGTCCTCGAACTCCAATCG +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQLPWVL*VLELQS
Trigger: CGATTGGAGTTCGAGGACTCACAGGACCCAAGGGAG...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATCACGGCCTCCCCGATaGTGTTGGCATAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQSRPPR*CWHRGQ
Trigger: TTGCCCTCTATGCCAACAGCATCGGGGAGGCCGTGA...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAACAACAGAAGATGCGGTaGGGGCAGTCAGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQQQKMR*GQSEKR
Trigger: CCGCTTCTCTGACTGCCCGCACCGCATCTTCTGTTG...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACCCTCAGGTTGCCAGTaGAGGCGGAAGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSPSGCQ*RRKPGA
Trigger: AGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATTTGTCTCGAGTGGCATaGAAGAGGAACACCACGTCC +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHLSRVA*KRNTTS
Trigger: GGACGTGGTGTTCCTCTTGCATGCCACTCGAGACAA...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTGTCCCCAGGTCCTCCTaGACGGCCAGCTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPVPRSS*TASFTL
Trigger: AAGGGTGAAGCTGGCCGTGCAGGAGGACCTGGGGAC...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTCCCTTGGGTCCTGACTaGCCATCAAAGCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTPLGPD*PSKPLS
Trigger: TGACAGAGGCTTTGATGGGCAGTCAGGACCCAAGGG...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGGTCCTGGTCGTCCCTaGTCTCCTCTCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSGPGRP*SPLSPG
Trigger: CCCTGGAGAGAGAGGAGAGCAGGGACGACCAGGACC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTAGTTGCTGCGGCCAATaGACGACGAGCCATCGAGTA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTSCCGQ*TTSHRV
Trigger: TACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACT...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATTCAGGATGCAGACCTTaGGGACACCAGGACGTGTTA +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHSGCRP*GHQDVL
Trigger: TAACACGTCCTGGTGTCCCCAAGGTCTGCATCCTGA...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGAGAAGAAGAAATCGCTaGTTGGCTGTGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKRRRNR*LAVRPH
Trigger: GTGTGGCCTCACAGCCAACCAGCGATTTCTTCTTCT...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCAAGGATTGGCTACTTaGCTCAGAGAGCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHQGLAT*LREHQV
Trigger: GACCTGGTGCTCTCTGAGCCAAGTAGCCAATCCTTG...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGTGTACTCGCAAGGATTaGCTACTTGGCTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKCTRKD*LLGSES
Trigger: GCTCTCTGAGCCAAGTAGCCAATCCTTGCGAGTACA...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAACCTCCCCGATGCTGTTaGCATAGAGGGCAACCACAG +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQPPRCC*HRGQPQ
Trigger: CTGTGGTTGCCCTCTATGCCAACAGCATCGGGGAGG...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGCCACGGTTGCAGGAGTaGCCACCTCACGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGPRLQE*PPHGPP
Trigger: TGGAGGGCCGTGAGGTGGCCACTCCTGCAACCGTGG...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGATTTCTCTGGACCATaGCCTGAGTGCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSDFSGP*PECQET
Trigger: GGTTTCCTGGCACTCAGGCCATGGTCCAGAGAAATC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGCCCTCGGCACTTCCTaGCCAGTTCCTCTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGALGTS*PVPLSG
Trigger: GCCGCTCAGAGGAACTGGCCAGGAAGTGCCGAGGGC...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGATGGGGTCCGTGCCTaGTGCCAAGCGACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHDGVRA*CQATQL
Trigger: CAGCTGCGTCGCTTGGCACCAGGCACGGACCCCATC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTACCCGGCTCCCCCTTTaGACCTTGAGGCCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPTRLPL*TLRPSF
Trigger: GAACGAGGGCCTCAAGGTCCAAAGGGGGAGCCGGGT...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTACCCTTGTCTCCTGCTaGGCCTCGAACACCGGGGTC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPTLVSC*ASNTGV
Trigger: GACCCCGGTGTTCGAGGCCCAGCAGGAGACAAGGGT...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATTCTCCTCGAAGGCCTaGAAGTCCATCTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQFSSKA*KSISPR
Trigger: CCGGGGAGAGATGGACTTCCAGGCCTTCGAGGAGAA...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATTTTCCCATTCAGGCCTaGTTTGCCATCATCGCCTGC +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHFPIQA*FAIIAC
Trigger: GCAGGCGATGATGGCAAACCAGGCCTGAATGGGAAA...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGACCACCAGCCCGGCCTaGGAGTCCAGGAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGTTSPA*ESRNAR
Trigger: CCTGGCATTCCTGGACTCCCAGGCCGGGCTGGTGGT...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAACCACCAGCCCGGCCTaGGAGTCCAGGAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPTTSPA*ESRNAR
Trigger: CCTGGCATTCCTGGACTCCCAGGCCGGGCTGGTGGT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAACCCGGGGCACCAGGTaGTCCAGGGTCTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPTRGTR*SRVSMA
Trigger: AGCCATGGAGACCCTGGACCACCTGGTGCCCCGGGT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACCCAACAGGCCCTGGCTaGCCCGTCTCTCCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHPTGPG*PVSPRG
Trigger: ACCTCGAGGAGAGACGGGCCAGCCAGGGCCTGTTGG...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTACCACCAGGTGGCCCTaGGGGACCACTAGAGCCATC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPTTRWP*GTTRAI
Trigger: GATGGCTCTAGTGGTCCCCCAGGGCCACCTGGTGGT...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGGGGCCAGCAGGTCCTaGTCGTCCCTGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHGASRS*SSLLSS
Trigger: AGAGGAGAGCAGGGACGACCAGGACCTGCTGGCCCC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCATGCCTGTCCTCCAGCTaGTCCGAAATCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPCLSSS*SEIHWL
Trigger: GAGCCAGTGGATTTCGGATCAGCTGGAGGACAGGCA...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTTCCCCCTTTGGACCTTaGGGCCCTCGTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPSPFGP*GPRSPC
Trigger: ACAGGGAGAACGAGGGCCTCAAGGTCCAAAGGGGGA...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCACCTGGGTTGCCATCATaGCCCCTCTTTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPPGLPS*PLFPGS
Trigger: AGAGCCTGGAAAGAGGGGTCATGATGGCAACCCAGG...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATCACCCTTGTCACCCTTaGGCCCTGCAGCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHHPCHP*ALQRQQ
Trigger: CTGCTGGCGCTGCAGGGCTCAAGGGTGACAAGGGTG...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGTCCCATCAGGATCTCTaGAGCGCAGAGCGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLSHQDL*SAERSD
Trigger: GTCGCTGCGCTCTGCGCTGCAGAGATCCTGATGGGA...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGACCCTGGAGACGCGTaGTGGTCTCACCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHDPGDA*WSHQPG
Trigger: TCCCGGCTGGTGAGACCAGCACGCGTCTCCAGGGTC...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTATGGGATGCAGGGTTTaGTCAACAGAAGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSMGCRV*STEDAV
Trigger: CACCGCATCTTCTGTTGAGCAAACCCTGCATCCCAT...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGCCACCCTCAGGTTaGCAGTGCAGGCGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHWPPSG*QCRRKP
Trigger: AGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGCCA...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCTGGGAGTCCAGGAATaGCAGGCTTTCCGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLLGVQE*QAFRVP
Trigger: GGGAACCCGGAAAGCCTGGCATTCCTGGACTCCCAG...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGTCACCCTTGAGCCCTaGAGCGCCAGCAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLVTLEP*SASSAL
Trigger: AAGGGCGCTGCTGGCGCTGCAGGGCTCAAGGGTGAC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAACTTTGTCACCATCTATaGCCCGAGGCCCTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQLCHHL*PEALVH
Trigger: GTGAACGAGGGCCTCGGGGCATAGATGGTGACAAAG...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTTCAGGATGCAGACCTTaGGGACACCAGGACGTGTTA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTSGCRP*GHQDVL
Trigger: TAACACGTCCTGGTGTCCCCAAGGTCTGCATCCTGA...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTAGAAGAAGAAATCGCTaGTTGGCTGTGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSRRRNR*LAVRPH
Trigger: GTGTGGCCTCACAGCCAACCAGCGATTTCTTCTTCT...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTTGTACTCGCAAGGATTaGCTACTTGGCTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSCTRKD*LLGSES
Trigger: GCTCTCTGAGCCAAGTAGCCAATCCTTGCGAGTACA...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGCAGGCCCCACGCTGTaGCCAAATAGGGCGCTCACG +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHAGPTL*PNRALT
Trigger: CGTGAGCGCCCTATTTGGCCACAGCGTGGGGCCTGC...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCCCTGGCAGTGTCTGTaGGGCCCTCGGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWPWQCL*GPRHFL
Trigger: CAGGAAGTGCCGAGGGCCCCACAGACACTGCCAGGG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGTATCTGTGAGCTGTaGTCACGGCTGTGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPGICEL*SRLCRG
Trigger: ACCTCGGCACAGCCGTGACCACAGCTCACAGATACC...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATTAAGCCCAGAAGTCTaGGCCTCACGAATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQLSPEV*ASRMGL
Trigger: CAGCCCCATTCGTGAGGCCCAGACTTCTGGGCTTAA...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGATGGGGTCCGTGCCTaGTGCCAAGCGACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLDGVRA*CQATQL
Trigger: CAGCTGCGTCGCTTGGCACCAGGCACGGACCCCATC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTTGCTCTGTCCAAGCCTaGGCCATTATCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSCSVQA*AIIHSK
Trigger: TTTGCTGTGGATAATGGCCCAGGCTTGGACAGAGCA...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTCTGTTTGCGGCTCTATaGTCACAGCTGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTLFAAL*SQLPDT
Trigger: TGTGTCAGGCAGCTGTGACCATAGAGCCGCAAACAG...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCTGTCCTGGGAGGCCTaGACCTCCATCCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPLSWEA*TSILTV
Trigger: GACTGTGAGGATGGAGGTCCAGGCCTCCCAGGACAG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAGGCCTGGCTCTTCAATaGCCACCTTGGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPGLALQ*PPWGQE
Trigger: CTCCTGGCCCCAAGGTGGCCATTGAAGAGCCAGGCC...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGGTCACCATCACTGCCTaGCTCCCCCTTGGCACCCTT +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLVTITA*LPLGTL
Trigger: AAGGGTGCCAAGGGGGAGCCAGGCAGTGATGGTGAC...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGTCCAGGGTCTCCATaGCTACCCACTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWGPGSP*LPTGPG
Trigger: CCCTGGCCCAGTGGGTAGCCATGGAGACCCTGGACC...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGACCCGGGGCACCAGGTaGTCCAGGGTCTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWTRGTR*SRVSMA
Trigger: AGCCATGGAGACCCTGGACCACCTGGTGCCCCGGGT...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACAGGCAGACCCCGTCCTaGAGGTCCTGTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHRQTPS*RSCLSR
Trigger: CCTGGAGAGACAGGACCTCCAGGACGGGGTCTGCCT...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACACCTGGAGAGCCTTGTaGACCCACGAGGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHTWRAL*THEAGR
Trigger: CCTTCCGGCCTCGTGGGTCCACAAGGCTCTCCAGGT...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAGCTACCGTCACGGCCTaGAGGTCCTGGCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPATVTA*RSWLPC
Trigger: ACAGGGAAGCCAGGACCTCCAGGCCGTGACGGTAGC...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGTCCTCGGTCACCTTTaGCTCCCGGCTCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGVLGHL*LPAHPA
Trigger: TGCTGGGTGAGCCGGGAGCCAAAGGTGACCGAGGAC...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGTGGTCCCAAGGGACCTaGGGCACCTTCTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGWSQGT*GTFSPW
Trigger: CCAGGGAGAGAAGGTGCCCCAGGTCCCTTGGGACCA...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAACCAACACCACCAGGTaGCCCTGGGGGACCACTAGA +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSTNTTR*PWGTTR
Trigger: TCTAGTGGTCCCCCAGGGCCACCTGGTGGTGTTGGT...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAGCCCTTCGGGTCCCTTaGGACCAACACCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPALRVP*DQHHQV
Trigger: CACCTGGTGGTGTTGGTCCCAAGGGACCCGAAGGGC...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGTGCACTGGCTGCTCCTaGGAAAGGCAGCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLCTGCS*ERQHQP
Trigger: GGGCTGGTGCTGCCTTTCTCAGGAGCAGCCAGTGCA...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATGGATCTTTCGCAAGATaGTGCCAAGATCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHGSFAR*CQDHGN
Trigger: GTTCCCATGATCTTGGCATCATCTTGCGAAAGATCC...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGTCCCCCTTTGGACCTTaGGGCCCTCGTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGSPFGP*GPRSPC
Trigger: ACAGGGAGAACGAGGGCCTCAAGGTCCAAAGGGGGA...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCACTTCTCGAAAGTTGCTaGGGCCAATGGACGACGAGC +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPLLESC*GQWTTS
Trigger: GCTCGTCGTCCATTGGCCGCAGCAACTTTCGAGAAG...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTTCACCTCATAGTCCGTaGCAGGCTCCAAGTGATCTA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTSPHSP*QAPSDL
Trigger: TAGATCACTTGGAGCCTGGCACGGACTATGAGGTGA...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCAACAGAAGATGCGGTaGGGGCAGTCAGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPQQKMR*GQSEKR
Trigger: CCGCTTCTCTGACTGCCCGCACCGCATCTTCTGTTG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGACCATGGCCTGAGTaGCAGGAAACCCTGTATCCT +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPGPWPE*QETLYP
Trigger: AGGATACAGGGTTTCCTGGCACTCAGGCCATGGTCC...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGCAGTTTCGACACACTaGCCACAGGCTCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSAVSTH*PQAQEQ
Trigger: CTGCTCCTGAGCCTGTGGGCAGTGTGTCGAAACTGC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGGAAGCATTAAGGATTTaGAGTTTCGACACACTGCCC +
Preference number: 4 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKEALRI*SFDTLP
Trigger: GGGCAGTGTGTCGAAACTGCAAATCCTTAATGCTTC...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTGAGATCCCGTATCTCTaGAGACTCTTTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSEIPYL*RLFVSW
Trigger: CCAGGAAACAAAGAGTCTGCAGAGATACGGGATCTC...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATCCCTCAGGTTGCCAGTaGAGGCGGAAGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHPSGCQ*RRKPGA
Trigger: AGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGG...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAAGCCAGATCACTGACTaGTCTGTCCAAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSSQITD*SVQAWA
Trigger: GGCCCAGGCTTGGACAGAGCAGTCAGTGATCTGGCT...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGTCCCCAGGTCCTCCTaGACGGCCAGCTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHVPRSS*TASFTL
Trigger: AAGGGTGAAGCTGGCCGTGCAGGAGGACCTGGGGAC...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGACAACCCGCAGTCCTaGGACAACAAGTGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSDNPQS*DNKWGF
Trigger: GAAGCCCCACTTGTTGTCCCAGGACTGCGGGTTGTC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGAAACCCTGTATCCTGTaGCACCGGGAACCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLKPCIL*HREPQS
Trigger: GGACTGGGGTTCCCGGTGCCACAGGATACAGGGTTT...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGAGCATTGTCTCGAGTaGCATGCAAGAGGAACACCA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTEHCLE*HARGTP
Trigger: TGGTGTTCCTCTTGCATGCCACTCGAGACAATGCTC...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGCGACGCAGCTGCTCTaGGTCAGCTCCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHATQLL*VSSHQT
Trigger: AGTTTGGTGGGAGCTGACCCAGAGCAGCTGCGTCGC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTTGCTCTGTCCAAGCCTaGGCCATTATCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: APNGAQQDPAETLPPPGTCSVQA*AIIHSK
Trigger: TTTGCTGTGGATAATGGCCCAGGCTTGGACAGAGCA...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCTTTCCAGGAAACCCTaGCCCTCCACCGCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPLSRKP*PSTASD
Trigger: ATCACTGGCGGTGGAGGGCCAGGGTTTCCTGGAAAG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGTTCCAGAAGCTCCTCTaGGCCCAGGGAGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWFQKLL*AQGAQP
Trigger: AGGCTGGGCTCCCTGGGCCCAGAGGAGCTTCTGGAA...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGCCCCACGGTCACCCTTaGGTCCAGATGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLPHGHP*VQMIQG
Trigger: GCCCTGGATCATCTGGACCCAAGGGTGACCGTGGGG...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGGCCCTGTTCCCCTTTaGATCCAGTCTCTCCACGGT +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSGPVPL*IQSLHG
Trigger: ACCGTGGAGAGACTGGATCCAAAGGGGAACAGGGCC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAAGCCAGTCCAGGGCCTaGCTCTTCAATGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSSQSRA*LFNGHL
Trigger: AAGGTGGCCATTGAAGAGCCAGGCCCTGGACTGGCT...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTGTCTCCCTTCATACCTaGAGGACCACTTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPVSLHT*RTTWAR
Trigger: CCTGGCCCAAGTGGTCCTCCAGGTATGAAGGGAGAC...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCACCCATATCCCCTTTaGCACCTCGTGGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWHPYPL*HLVARE
Trigger: CTCCCGGGCCACGAGGTGCCAAAGGGGATATGGGTG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATACCACCAGGTGGCCCTaGGGGACCACTAGAGCCATC +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHTTRWP*GTTRAI
Trigger: GATGGCTCTAGTGGTCCCCCAGGGCCACCTGGTGGT...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACACCAACACCACCAGGTaGCCCTGGGGGACCACTAGA +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHTNTTR*PWGTTR
Trigger: TCTAGTGGTCCCCCAGGGCCACCTGGTGGTGTTGGT...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGCCCTTCGGGTCCCTTaGGACCAACACCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLALRVP*DQHHQV
Trigger: CACCTGGTGGTGTTGGTCCCAAGGGACCCGAAGGGC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGTTCCAAAACGATTaGCATTCCCTCCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPGFQND*HSLRSH
Trigger: GTGGCTGCGGAGGGAATGCCAATCGTTTTGGAACCC...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTGTGCCAGGCTCCAAGTaGTCTAGAAACACTGACCCC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPVPGSK*SRNTDP
Trigger: GGGGTCAGTGTTTCTAGATCACTTGGAGCCTGGCAC...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGGCAGAGTATACAGCGTaGGACGGTACTCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLAEYTA*DGTQCL
Trigger: CAGGCACTGAGTACCGTCTCACGCTGTATACTCTGC...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGGTGATGCTGACAGATaGGCTGCCAGCCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSGDADR*AASLSQ
Trigger: TTGACTCAGGCTGGCAGCTCATCTGTCAGCATCACC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCACTCTGTGGGAGCTTaGGGTCCCTGGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWHSVGA*GPWQCL
Trigger: CAGACACTGCCAGGGACCTCAAGCTCCCACAGAGTG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGGCTAAGAGGTATCTGTaGGCTGTGGTCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLAKRYL*AVVTAV
Trigger: CACAGCCGTGACCACAGCTCACAGATACCTCTTAGC...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGCAGGGCCGACACCTTaGTGCCAGCAGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLAGPTP*CQQFPA
Trigger: TGCTGGAAACTGCTGGCATCAAGGTGTCGGCCCTGC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACCTCGAGGTCCTGTCTaGCCAGGGAACCCAACAACA +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPPRGPV*PGNPTT
Trigger: TGTTGTTGGGTTCCCTGGTCAGACAGGACCTCGAGG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACCCTCGAGGTCCTGTCTaGCCAGGGAACCCAACAACA +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHPRGPV*PGNPTT
Trigger: TGTTGTTGGGTTCCCTGGTCAGACAGGACCTCGAGG...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTTCCAATCGATCCAGCTaGGCCTTTGTCACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPSNRSS*AFVTWL
Trigger: GAGCCAGGTGACAAAGGCTCAGCTGGATCGATTGGA...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGTCACCCTTGGGTCCTaGCTGCCCATCAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGVTLGS*LPIKAS
Trigger: AGAGGCTTTGATGGGCAGTCAGGACCCAAGGGTGAC...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGTCACGGCCTCCCCGATaGTGTTGGCATAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGSRPPR*CWHRGQ
Trigger: TTGCCCTCTATGCCAACAGCATCGGGGAGGCCGTGA...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAATGGGATGCAGGGTTTaGTCAACAGAAGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQMGCRV*STEDAV
Trigger: CACCGCATCTTCTGTTGAGCAAACCCTGCATCCCAT...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCTCAAGATGATGGGATaGAGGGTTTGCTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHLKMMG*RVCSTE
Trigger: TTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAG...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGTGTAGGAACCACGGTTaGAGGAGTGGCCACCTCACG +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGCRNHG*RSGHLT
Trigger: CGTGAGGTGGCCACTCCTGCAACCGTGGTTCCTACA...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGCAGTTTCGACACACTaGCCACAGGCTCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHAVSTH*PQAQEQ
Trigger: CTGCTCCTGAGCCTGTGGGCAGTGTGTCGAAACTGC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCTCTATGGTCACAGCTaGCTGACACAGGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLLYGHS*LTQGYS
Trigger: GCTGTAGCCCTGTGTCAGGCAGCTGTGACCATAGAG...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACTCTATGGTCACAGCTaGCTGACACAGGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSLYGHS*LTQGYS
Trigger: GCTGTAGCCCTGTGTCAGGCAGCTGTGACCATAGAG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTGAGGCCACGTTCACCTaGTTTTCCAGGCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPEATFT*FSRQTW
Trigger: CCAGGTTTGCCTGGAAAAGCAGGTGAACGTGGCCTC...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCCGGGTCCCCAGCTTTaGCTGAAGCACCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWPGPQL*LKHHVA
Trigger: GGCTACATGGTGCTTCAGGCAAAGCTGGGGACCCGG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCTGGGAGTCCAGGAATaGCAGGCTTTCCGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWLGVQE*QAFRVP
Trigger: GGGAACCCGGAAAGCCTGGCATTCCTGGACTCCCAG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAAGGTCACTCTATCTCTaGGCTGGGCCCACACTTCCG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPRSLYL*AGPTLP
Trigger: CGGAAGTGTGGGCCCAGCCCAGAGATAGAGTGACCT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACCACGGATGGCTCGGATaGTGTCACTCCCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHHGWLG*CHSQSQ
Trigger: TTGGCTCTGGGAGTGACACCATCCGAGCCATCCGTG...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCAGTCACAGGGCCACTaGCTGCTGTCCATTGTACTC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPQSQGH*LLSIVL
Trigger: GAGTACAATGGACAGCAGCCAGTGGCCCTGTGACTG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACAGTCACAGGGCCACTaGCTGCTGTCCATTGTACTC +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSQSQGH*LLSIVL
Trigger: GAGTACAATGGACAGCAGCCAGTGGCCCTGTGACTG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTATTCTAGCCCTTCCTTaGCAGTGGTCCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPILALP*QWSELS
Trigger: GGACAGCTCGGACCACTGCCAAGGAAGGGCTAGAAT...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTAAGTCAAAGGTTGTCTaGCTCCCAGGAAGCAATAGA +
Preference number: 4 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSKSKVV*LPGSNR
Trigger: TCTATTGCTTCCTGGGAGCCAGACAACCTTTGACTT...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGACAACCCGCAGTCCTaGGACAACAAGTGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHDNPQS*DNKWGF
Trigger: GAAGCCCCACTTGTTGTCCCAGGACTGCGGGTTGTC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGTGGACTCTCCTCACTaGGCCCAGTGGATCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSVDSPH*AQWISS
Trigger: AGAACTGATCCACTGGGCCCAGTGAGGAGAGTCCAC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAGCCATGGGAACACGCTaGTGTTTGTGTGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQAMGTR*CLCDRD
Trigger: ATCTCTGTCACACAAACACCAGCGTGTTCCCATGGC...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGATTCAGTGGGAACAGTaGGGAGGGCCGGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGIQWEQ*GGPVAV
Trigger: TACAGCCACCGGCCCTCCCCACTGTTCCCACTGAAT...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGATGGGAACTATTCAGTaGGAACAGTGGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLMGTIQ*EQWGGP
Trigger: CGGCCCTCCCCACTGTTCCCACTGAATAGTTCCCAT...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACTCTCGCCTTTTGCCTaGGTACTTCCAGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSLSPFA*VLPGGP
Trigger: AGGTCCTCCTGGAAGTACCCAGGCAAAAGGCGAGAG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATCTGTCCTGGGAGGCCTaGACCTCCATCCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHLSWEA*TSILTV
Trigger: GACTGTGAGGATGGAGGTCCAGGCCTCCCAGGACAG...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGTCACCATCACTGCCTaGCTCCCCCTTGGCACCCTT +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHVTITA*LPLGTL
Trigger: AAGGGTGCCAAGGGGGAGCCAGGCAGTGATGGTGAC...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACCCAGACGCAATAAACTaGCCCTGGCAGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHPDAIN*PWQAQC
Trigger: GCACTGTGCCTGCCAGGGCCAGTTTATTGCGTCTGG...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACCAGACGCAATAAACTaGCCCTGGCAGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPPDAIN*PWQAQC
Trigger: GCACTGTGCCTGCCAGGGCCAGTTTATTGCGTCTGG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGGGATTTCCCATCTGTaGTCAGGATGCAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSGISHL*SGCRPW
Trigger: CCAAGGTCTGCATCCTGATCACAGATGGGAAATCCC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGTGCCAGGCTCCAAGTaGTCTAGAAACACTGACCCC +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGVPGSK*SRNTDP
Trigger: GGGGTCAGTGTTTCTAGATCACTTGGAGCCTGGCAC...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGTGCAAACCATCCAGCTaGTGGCGGGTCACATCAGGG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLCKPSS*WRVTSG
Trigger: CCCTGATGTGACCCGCCATCAGCTGGATGGTTTGCA...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGTGCCTGTCCTCCAGCTaGTCCGAAATCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWCLSSS*SEIHWL
Trigger: GAGCCAGTGGATTTCGGATCAGCTGGAGGACAGGCA...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACTACAGCCAGATCACTaGCTGCTCTGTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPLQPDH*LLCPSL
Trigger: CAGGCTTGGACAGAGCAGTCAGTGATCTGGCTGTAG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATATGGTCACAGCTGCCTaGCACAGGGCTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHMVTAA*HRATAR
Trigger: TCTGGCTGTAGCCCTGTGTCAGGCAGCTGTGACCAT...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGATGGTCACAGCTGCCTaGCACAGGGCTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWMVTAA*HRATAR
Trigger: TCTGGCTGTAGCCCTGTGTCAGGCAGCTGTGACCAT...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATCCTGGGTTGCCATCATaGCCCCTCTTTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHPGLPS*PLFPGS
Trigger: AGAGCCTGGAAAGAGGGGTCATGATGGCAACCCAGG...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATCCAATCGATCCAGCTaGGCCTTTGTCACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPSNRSS*AFVTWL
Trigger: GAGCCAGGTGACAAAGGCTCAGCTGGATCGATTGGA...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGTCACCCTTGGGTCCTaGCTGCCCATCAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHVTLGS*LPIKAS
Trigger: AGAGGCTTTGATGGGCAGTCAGGACCCAAGGGTGAC...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGCCTTCCTCCTCAACATaGGAGACCCGGAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLPSSST*ETRSTG
Trigger: TCCTGTGCTCCGGGTCTCTCATGTTGAGGAGGAAGG...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGGGATCATCACTGTACTaGACTGTGGCAAACCGGACG +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLGSSLY*TVANRT
Trigger: CGTCCGGTTTGCCACAGTGCAGTACAGTGATGATCC...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACACAGGGCCACTGGCTaGTGTCCATTGTACTCGCAA +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPHRATG*CPLYSQ
Trigger: TTGCGAGTACAATGGACAGCAGCCAGTGGCCCTGTG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCATTGTCTCGAGTGGCATaGAAGAGGAACACCACGTCC +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSLSRVA*KRNTTS
Trigger: GGACGTGGTGTTCCTCTTGCATGCCACTCGAGACAA...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGACCAAGAGGCCCAAGTaGAGACACCAGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGTKRPK*RHQPFQ
Trigger: CTGGAAAGGCTGGTGTCTGCACTTGGGCCTCTTGGT...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATAGCCAGATCACTGACTaGTCTGTCCAAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHSQITD*SVQAWA
Trigger: GGCCCAGGCTTGGACAGAGCAGTCAGTGATCTGGCT...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATCGCCCTGCTCTCCTTTaGTTCCAGAAGCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHRPALL*FQKLLW
Trigger: CCAGAGGAGCTTCTGGAAGCAAAGGAGAGCAGGGCG...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACAAGAGCCAATCCAGGTaGGCCCTGCTCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHKSQSR*ALLSFA
Trigger: AGCAAAGGAGAGCAGGGCGCACCTGGATTGGCTCTT...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCCTGGAGTCCAGGATTaGCAGGAGCTCCACGTTCAC +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWPGVQD*QELHVH
Trigger: GTGAACGTGGAGCTCCTGGCAATCCTGGACTCCAGG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGCACCGGTAGGAAGCTaGCAGAACTCTCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLAPVGS*QNSHPR
Trigger: CCTGGGATGAGAGTTCTGGCAGCTTCCTACCGGTGC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGAGTTGCTGCGGCCAATaGACGACGAGCCATCGAGTA +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGSCCGQ*TTSHRV
Trigger: TACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACT...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCACGGATGGCTCGGATaGTGTCACTCCCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWHGWLG*CHSQSQ
Trigger: TTGGCTCTGGGAGTGACACCATCCGAGCCATCCGTG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGCCTCCCCGATGCTGTTaGCATAGAGGGCAACCACAG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLPPRCC*HRGQPQ
Trigger: CTGTGGTTGCCCTCTATGCCAACAGCATCGGGGAGG...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAACGGTACTCAGTGCCTaGCTGCAAACCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPTVLSA*LQTIQL
Trigger: CAGCTGGATGGTTTGCAGCCAGGCACTGAGTACCGT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCATCCTGGGACAACAAGTaGGGCTTCTGGATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSSWDNK*GFWISV
Trigger: CACAGAGATCCAGAAGCCCCACTTGTTGTCCCAGGA...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTTCCTGGGACAACAAGTaGGGCTTCTGGATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPSWDNK*GFWISV
Trigger: CACAGAGATCCAGAAGCCCCACTTGTTGTCCCAGGA...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACCTCACTGGGCCCAGTaGATCAGTTCTAGCCACGAT +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPPHWAQ*ISSSHD
Trigger: ATCGTGGCTAGAACTGATCCACTGGGCCCAGTGAGG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGTGGACTCTCCTCACTaGGCCCAGTGGATCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHVDSPH*AQWISS
Trigger: AGAACTGATCCACTGGGCCCAGTGAGGAGAGTCCAC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATAAACCCTGTATCCTGTaGCACCGGGAACCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHKPCIL*HREPQS
Trigger: GGACTGGGGTTCCCGGTGCCACAGGATACAGGGTTT...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATATTCAGTGGGAACAGTaGGGAGGGCCGGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHIQWEQ*GGPVAV
Trigger: TACAGCCACCGGCCCTCCCCACTGTTCCCACTGAAT...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAATGGGAACTATTCAGTaGGAACAGTGGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPMGTIQ*EQWGGP
Trigger: CGGCCCTCCCCACTGTTCCCACTGAATAGTTCCCAT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATATGATGCCAAGATCATaGGAACTATTCAGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHMMPRS*ELFSGN
Trigger: GTTCCCACTGAATAGTTCCCATGATCTTGGCATCAT...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGCTCTCGCCTTTTGCCTaGGTACTTCCAGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGLSPFA*VLPGGP
Trigger: AGGTCCTCCTGGAAGTACCCAGGCAAAAGGCGAGAG...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGAGGACCCGTAATTCCTaGGACACCAGGGAAACCCTG +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGRTRNS*DTRETL
Trigger: CAGGGTTTCCCTGGTGTCCCAGGAATTACGGGTCCT...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGCCCTGTTCCCCTTTaGATCCAGTCTCTCCACGGT +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWGPVPL*IQSLHG
Trigger: ACCGTGGAGAGACTGGATCCAAAGGGGAACAGGGCC...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGTCTCCCTTCATACCTaGAGGACCACTTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLVSLHT*RTTWAR
Trigger: CCTGGCCCAAGTGGTCCTCCAGGTATGAAGGGAGAC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCACCTGGCTCTCCTTTaGAACCCTTGTCACCAGGAT +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPHLALL*NPCHQD
Trigger: ATCCTGGTGACAAGGGTTCCAAAGGAGAGCCAGGTG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATTCCCCTTTCTCGCCTTaGTCACCCTTGGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHSPFSP*SPLGPD
Trigger: GTCAGGACCCAAGGGTGACCAAGGCGAGAAAGGGGA...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGGGCTTCACCATCCCATaGAACTTCAGGCTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLGFTIP*NFRLLV
Trigger: TACCAGGAGCCTGAAGTTCCATGGGATGGTGAAGCC...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAGGGATTTCCCATCTGTaGTCAGGATGCAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPGISHL*SGCRPW
Trigger: CCAAGGTCTGCATCCTGATCACAGATGGGAAATCCC...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGACACCCTCCTGGAAATaGGAGGCAACAGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLTPSWK*EATGSS
Trigger: TGAGGACCCTGTTGCCTCTCATTTCCAGGAGGGTGT...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGCAGAGTATACAGCGTaGGACGGTACTCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLAEYTA*DGTQCL
Trigger: CAGGCACTGAGTACCGTCTCACGCTGTATACTCTGC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGTCAGTGCTCGGGATGTaGGAGGGCTCAGTGTATGCA +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWSVLGM*EGSVYA
Trigger: TGCATACACTGAGCCCTCTCACATCCCGAGCACTGA...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCTACAGCCAGATCACTaGCTGCTCTGTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWLQPDH*LLCPSL
Trigger: CAGGCTTGGACAGAGCAGTCAGTGATCTGGCTGTAG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGGATCATCACTGTACTaGACTGTGGCAAACCGGACG +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGGSSLY*TVANRT
Trigger: CGTCCGGTTTGCCACAGTGCAGTACAGTGATGATCC...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGGACCATGGCCTGAGTaGCAGGAAACCCTGTATCCT +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLGPWPE*QETLYP
Trigger: AGGATACAGGGTTTCCTGGCACTCAGGCCATGGTCC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAGAAGCATTAAGGATTTaGAGTTTCGACACACTGCCC +
Preference number: 4 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQEALRI*SFDTLP
Trigger: GGGCAGTGTGTCGAAACTGCAAATCCTTAATGCTTC...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGCCTCCTCACAGCCTCTaGGTTGTGAGCATTGTCTCG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLPPHSL*VVSIVS
Trigger: CGAGACAATGCTCACAACGCAGAGGCTGTGAGGAGG...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATTGGCCCTTTGGACAGTaGACAGCACAAGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHWPFGQ*TAQGPV
Trigger: AACAGGGCCTTGTGCTGTGCACTGTCCAAAGGGCCA...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGAGGCCACGTTCACCTaGTTTTCCAGGCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHEATFT*FSRQTW
Trigger: CCAGGTTTGCCTGGAAAAGCAGGTGAACGTGGCCTC...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGTGCCCCTTCAGCTTTTaGGCAGCTGTGTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLCPFSF*AAVSTK
Trigger: TTTAGTGGACACAGCTGCCCAAAAGCTGAAGGGGCA...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGATTCTAGCCCTTCCTTaGCAGTGGTCCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWILALP*QWSELS
Trigger: GGACAGCTCGGACCACTGCCAAGGAAGGGCTAGAAT...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGACGGTACTCAGTGCCTaGCTGCAAACCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWTVLSA*LQTIQL
Trigger: CAGCTGGATGGTTTGCAGCCAGGCACTGAGTACCGT...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCACTATTTCAGCCACCGTaGCATCTCCAGAAACCAACA +
Preference number: 4 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPLFQPP*HLQKPT
Trigger: TGTTGGTTTCTGGAGATGCCACGGTGGCTGAAATAG...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATAGGACCCGTAATTCCTaGGACACCAGGGAAACCCTG +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHRTRNS*DTRETL
Trigger: CAGGGTTTCCCTGGTGTCCCAGGAATTACGGGTCCT...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTATCGCCTTTGATGCCTaGTACACCCCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPIAFDA*YTPVSF
Trigger: AAAGGAGACAGGGGTGTACCAGGCATCAAAGGCGAT...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGTTCCAAAACGATTaGCATTCCCTCCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHGFQND*HSLRSH
Trigger: GTGGCTGCGGAGGGAATGCCAATCGTTTTGGAACCC...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGATGTCGGGCTCAAGATaGTGGGATGCAGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLMSGSR*WDAGFA
Trigger: AGCAAACCCTGCATCCCATCATCTTGAGCCCGACAT...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAACGCTGGTGTTTGTGTaGCAGAGATCTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPTLVFV*QRSQNL
Trigger: GAGGTTCTGAGATCTCTGTCACACAAACACCAGCGT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACAGCATAAAGGCGTGTaGAGGTCACTCTATCTCTGG +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPQHKGV*RSLYLW
Trigger: CCAGAGATAGAGTGACCTGCACACGCCTTTATGCTG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGGAGATCCCGTATCTCTaGAGACTCTTTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLEIPYL*RLFVSW
Trigger: CCAGGAAACAAAGAGTCTGCAGAGATACGGGATCTC...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCAAGGATTGGCTACTTaGCTCAGAGAGCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWQGLAT*LREHQV
Trigger: GACCTGGTGCTCTCTGAGCCAAGTAGCCAATCCTTG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCTATTTCAGCCACCGTaGCATCTCCAGAAACCAACA +
Preference number: 4 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPLFQPP*HLQKPT
Trigger: TGTTGGTTTCTGGAGATGCCACGGTGGCTGAAATAG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGCTGTTTGCGGCTCTATaGTCACAGCTGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLLFAAL*SQLPDT
Trigger: TGTGTCAGGCAGCTGTGACCATAGAGCCGCAAACAG...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGTTTCCCATTCAGGCCTaGTTTGCCATCATCGCCTGC +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWFPIQA*FAIIAC
Trigger: GCAGGCGATGATGGCAAACCAGGCCTGAATGGGAAA...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGCACCTGGCTCTCCTTTaGAACCCTTGTCACCAGGAT +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLHLALL*NPCHQD
Trigger: ATCCTGGTGACAAGGGTTCCAAAGGAGAGCCAGGTG...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCTTCACCATCCCATaGAACTTCAGGCTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHGFTIP*NFRLLV
Trigger: TACCAGGAGCCTGAAGTTCCATGGGATGGTGAAGCC...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGACGCTGGTGTTTGTGTaGCAGAGATCTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLTLVFV*QRSQNL
Trigger: GAGGTTCTGAGATCTCTGTCACACAAACACCAGCGT...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR TCA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGGATCTTTCGCAAGATaGTGCCAAGATCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: GITASGQGAGWTPVTSIHGSFAR*CQDHGN
Trigger: GTTCCCATGATCTTGGCATCATCTTGCGAAAGATCC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGCAGCATAAAGGCGTGTaGAGGTCACTCTATCTCTGG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLQHKGV*RSLYLW
Trigger: CCAGAGATAGAGTGACCTGCACACGCCTTTATGCTG...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGTCACCTCATAGTCCGTaGCAGGCTCCAAGTGATCTA +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLSPHSP*QAPSDL
Trigger: TAGATCACTTGGAGCCTGGCACGGACTATGAGGTGA...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATTGCCCCTTCAGCTTTTaGGCAGCTGTGTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHCPFSF*AAVSTK
Trigger: TTTAGTGGACACAGCTGCCCAAAAGCTGAAGGGGCA...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGCGATGTGATGTTCTaGAGGCTCAATTCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPCDVMF*RLNSSP
Trigger: AGGGCTAGAATTGAGCCTCCAGAACATCACATCGCA...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGAGGACAAGATATAACTaGATGCCCCAGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLRTRYN*MPQTLG
Trigger: CCCCAGTGTCTGGGGCATCCAGTTATATCTTGTCCT...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATAGGACAAGATATAACTaGATGCCCCAGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHRTRYN*MPQTLG
Trigger: CCCCAGTGTCTGGGGCATCCAGTTATATCTTGTCCT...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGCCATGGGAACACGCTaGTGTTTGTGTGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLAMGTR*CLCDRD
Trigger: ATCTCTGTCACACAAACACCAGCGTGTTCCCATGGC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGAGCATTGTCTCGAGTaGCATGCAAGAGGAACACCA +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWEHCLE*HARGTP
Trigger: TGGTGTTCCTCTTGCATGCCACTCGAGACAATGCTC...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGATCGCCTTTGATGCCTaGTACACCCCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWIAFDA*YTPVSF
Trigger: AAAGGAGACAGGGGTGTACCAGGCATCAAAGGCGAT...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR GCA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACTCAAGATGATGGGATaGAGGGTTTGCTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: PNSESSARKAGATMGICPLKMMG*RVCSTE
Trigger: TTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGTGCGATGTGATGTTCTaGAGGCTCAATTCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLCDVMF*RLNSSP
Trigger: AGGGCTAGAATTGAGCCTCCAGAACATCACATCGCA...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGAAGTCAAAGGTTGTCTaGCTCCCAGGAAGCAATAGA +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGKSKVV*LPGSNR
Trigger: TCTATTGCTTCCTGGGAGCCAGACAACCTTTGACTT...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAATGATGCCAAGATCATaGGAACTATTCAGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSMMPRS*ELFSGN
Trigger: GTTCCCACTGAATAGTTCCCATGATCTTGGCATCAT...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGTGTCCACTAAATCTTaGGATTTCCCATCTGTGATC +
Preference number: 4 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGVSTKS*DFPSVI
Trigger: GATCACAGATGGGAAATCCCAAGATTTAGTGGACAC...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGACCAAATTCTGTCTGTaGATCATCACTGTACTGCAC +
Preference number: 4 (lower is better)
Translates to: NSESSARKAGATMGICPWTKFCL*IITVLH
Trigger: GTGCAGTACAGTGATGATCCACAGACAGAATTTGGT...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CCA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGACCAAATTCTGTCTGTaGATCATCACTGTACTGCAC +
Preference number: 4 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLTKFCL*IITVLH
Trigger: GTGCAGTACAGTGATGATCCACAGACAGAATTTGGT...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp TCTCCAACAGGCCCTGGCTGGCCCGTCTCTCCTCGAGGTCCTGTCTaGCCAGGGAACCCAACAACACCAGGAGCCCCGGGGGCACCAGGG +
Preference number: 5 (lower is better)
Translates to: SPTGPGWPVSPRGPV*PGNPTTPGAPGAPG
Trigger: CCCTGGTGCCCCCGGGGCTCCTGGTGTTGTTGGGTTCCCTGGTCAGACAGGACCTCGAGGAGAGACGGGCCAGCCAGGGCCTGTTGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp TGGAGGTCCTGGCTTCCCTGTCTCCCCCACTTGTCCGGGCAAACCTaGAGAGCCTTGTGGACCCACGAGGCCGGAAGGGCCAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: WRSWLPCLPHLSGQT*RALWTHEAGRARRA
Trigger: GGCCCTCCTGGCCCTTCCGGCCTCGTGGGTCCACAAGGCTCTCCAGGTTTGCCCGGACAAGTGGGGGAGACAGGGAAGCCAGGACCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGACTTCCAGGAGGACCTaGCGGGCCTGGAGCACCGGT +
Preference number: 5 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKTSRRT*RAWSTG
Trigger: ACCGGTGCTCCAGGCCCGCAAGGTCCTCCTGGAAGT...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGGGTCCCCGATCACCCTaGTCTCCTGCTGGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKGPRSP*SPAGPR
Trigger: TCGAGGCCCAGCAGGAGACAAGGGTGATCGGGGACC...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp CCTGGAGGCCCTTCTGGGCCAGGAAAGCCCCTCTCGCCTTTTGCCTaGGTACTTCCAGGAGGACCTTGCGGGCCTGGAGCACCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: PGGPSGPGKPLSPFA*VLPGGPCGPGAPVL
Trigger: CAGGACCGGTGCTCCAGGCCCGCAAGGTCCTCCTGGAAGTACCCAGGCAAAAGGCGAGAGGGGCTTTCCTGGCCCAGAAGGGCCTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCTCCTGTCGCTCACTaGGCAGTGGCTGCCCTAGCC +
Preference number: 5 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHPPVAH*AVAALA
Trigger: GGCTAGGGCAGCCACTGCCAAGTGAGCGACAGGAGG...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCACCCGGCTCCCCCTTaGGACCTTGAGGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSHPAPP*DLEALV
Trigger: AACGAGGGCCTCAAGGTCCAAAGGGGGAGCCGGGTG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGTCCCCACGGTCACCCTaGGGTCCAGATGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKSPRSP*GPDDPG
Trigger: CCCTGGATCATCTGGACCCAAGGGTGACCGTGGGGA...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp GCCCGGGAGGTCCCTCAATCACAGCTGAGTCACCCTTGTCACCCTTaGGCCCTGCAGCGCCAGCAGCGCCCTTCTCTCCTTGCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: AREVPQSQLSHPCHP*ALQRQQRPSLLALP
Trigger: GGGGAGAGCAAGGAGAGAAGGGCGCTGCTGGCGCTGCAGGGCTCAAGGGTGACAAGGGTGACTCAGCTGTGATTGAGGGACCTCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CTGTTCCTGGCCACCCTCAGGTTGCCAGTGCAGGCGGAAGCCTGGTaGTCCGGGTACTGGTTCCCATCGCAGCCTCAAGGAGTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LFLATLRLPVQAEAW*SGYWFPSQPQGVLP
Trigger: GGGGAGCACTCCTTGAGGCTGCGATGGGAACCAGTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGCCAGGAACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp GGTCCCAAGGTCAGGGACTGTTCCTGGCCACCCTCAGGTTGCCAGTaGAGGCGGAAGCCTGGTGCTCCGGGTACTGGTTCCCATCGCAGC +
Preference number: 5 (lower is better)
Translates to: GPKVRDCSWPPSGCQ*RRKPGAPGTGSHRS
Trigger: GCTGCGATGGGAACCAGTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGCCAGGAACAGTCCCTGACCTTGGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp ACTGCCTGGAGGCCCTTCTGGGCCAGGAAAGCCCCTCTCGCCTTTTaGCTGGGTACTTCCAGGAGGACCTTGCGGGCCTGGAGCACCGGT +
Preference number: 5 (lower is better)
Translates to: TAWRPFWARKAPLAF*LGTSRRTLRAWSTG
Trigger: ACCGGTGCTCCAGGCCCGCAAGGTCCTCCTGGAAGTACCCAGGCAAAAGGCGAGAGGGGCTTTCCTGGCCCAGAAGGGCCTCCAGGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp GTAATTCCTGGGACACCAGGGAAACCCTGGCCGGGAGGACCGACCTaGCCTGGGAGACCCGGAGGACCCTGGAGTCCAGGATTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: VIPGTPGKPWPGGPT*PGRPGGPWSPGLPG
Trigger: TCCTGGCAATCCTGGACTCCAGGGTCCTCCGGGTCTCCCAGGGCAGGTCGGTCCTCCCGGCCAGGGTTTCCCTGGTGTCCCAGGAATTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGTCGCCTTGGTCACCCTaGGGTCCTGACTGCCCATCA +
Preference number: 5 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKSPWSP*GPDCPS
Trigger: TGATGGGCAGTCAGGACCCAAGGGTGACCAAGGCGA...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACTGGCTGTGGACCCCTaGGGGTGGGCAGCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSLAVDP*GWAAAL
Trigger: GAGCGCCGCTGCCCACCCCAAGGGGTCCACAGCCAG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp GGGACCTTCTTGTCCAGGCTCTCCCTTGTCTCTGGATTCAATGCCTaGATCCACCAGCCGTCCAGGGGGACCTGGGGGACCAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: GTFLSRLSLVSGFNA*IHQPSRGTWGTRLP
Trigger: GGGGAGCCTGGTCCCCCAGGTCCCCCTGGACGGCTGGTGGATGCAGGCATTGAATCCAGAGACAAGGGAGAGCCTGGACAAGAAGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp AGGGATTCCATCCTTTCCTGGGGCTCCCGGCTCACCGGGGATCCCTaGAGCACCTGGCTCTCCCTTGGGTCCTGTGAGTCCTCGAACTCC +
Preference number: 5 (lower is better)
Translates to: RDSILSWGSRLTGDP*STWLSLGSCESSNS
Trigger: GGAGTTCGAGGACTCACAGGACCCAAGGGAGAGCCAGGTGCTGCAGGGATCCCCGGTGAGCCGGGAGCCCCAGGAAAGGATGGAATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp ACCCTCAGGTTGCCAGTGCAGGCGGAAGCCTGGTGCTCCGGGTACTaGTTCCCATCGCAGCCTCAAGGAGTGCTCCCCGCTCTGCACAAC +
Preference number: 5 (lower is better)
Translates to: TLRLPVQAEAWCSGY*FPSQPQGVLPALHN
Trigger: GTTGTGCAGAGCGGGGAGCACTCCTTGAGGCTGCGATGGGAACCAGTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GGACTGTTCCTGGCCACCCTCAGGTTGCCAGTGCAGGCGGAAGCCTaGTGCTCCGGGTACTGGTTCCCATCGCAGCCTCAAGGAGTGCTC +
Preference number: 5 (lower is better)
Translates to: GLFLATLRLPVQAEA*CSGYWFPSQPQGVL
Trigger: GAGCACTCCTTGAGGCTGCGATGGGAACCAGTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGCCAGGAACAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GGAGGGCCGGTGGCTGTAAGTCAGCAGGCCGACCTGAGCAGCCTGTaGACCAAGAGGCCCAAGTGCAGACACCAGCCTTTCCAGGACCCT +
Preference number: 5 (lower is better)
Translates to: GGPVAVSQQADLSSL*TKRPKCRHQPFQDP
Trigger: AGGGTCCTGGAAAGGCTGGTGTCTGCACTTGGGCCTCTTGGTCCACAGGCTGCTCAGGTCGGCCTGCTGACTTACAGCCACCGGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp CTGACCCTGAAGCCCTTCGGGTCCCTTGGGACCAACACCACCAGGTaGCCCTGGGGGACCACTAGAGCCATCGTTTCCTCTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: LTLKPFGSLGTNTTR*PWGTTRAIVSSGTW
Trigger: CCAGGTCCCAGAGGAAACGATGGCTCTAGTGGTCCCCCAGGGCCACCTGGTGGTGTTGGTCCCAAGGGACCCGAAGGGCTTCAGGGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCCCCCTTCTGGCCCTTaGGACAGTGCACAGCACAAG +
Preference number: 5 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSPPSGP*DSAQHK
Trigger: CTTGTGCTGTGCACTGTCCAAAGGGCCAGAAGGGGG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTAGGCCCTGTTCCCCTTaGGATCCAGTCTCTCCACGG +
Preference number: 5 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSRPCSP*DPVSPR
Trigger: CCGTGGAGAGACTGGATCCAAAGGGGAACAGGGCCT...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATGCTCCCGGGTCTCCCTaGTCTCCTTTGAGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHAPGSP*SPLSPE
Trigger: CTCTGGACTCAAAGGAGACAAGGGAGACCCGGGAGC...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGTCTCCCCGAGGTCCTTaGTCACCATCTATGCCCCGA +
Preference number: 5 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKSPRGP*SPSMPR
Trigger: TCGGGGCATAGATGGTGACAAAGGACCTCGGGGAGA...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp AGGCCCAGGTTCTCCTTTAGGTCCAACAGGGCCGGGCAGACCTGGTaGCCCCGGCACACCAGGACTTCCCCGATCTCCGTCCTTTCCACT +
Preference number: 5 (lower is better)
Translates to: RPRFSFRSNRAGQTW*PRHTRTSPISVLST
Trigger: AGTGGAAAGGACGGAGATCGGGGAAGTCCTGGTGTGCCGGGGTCACCAGGTCTGCCCGGCCCTGTTGGACCTAAAGGAGAACCTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp TGGAGGCCCCCTCTCCCCTTTCTCGCCTTGGTCACCCTTGGGTCCTaGCTGCCCATCAAAGCCTCTGTCACCCTTGGGACCGATCAGGCC +
Preference number: 5 (lower is better)
Translates to: WRPPLPFLALVTLGS*LPIKASVTLGTDQA
Trigger: GGCCTGATCGGTCCCAAGGGTGACAGAGGCTTTGATGGGCAGTCAGGACCCAAGGGTGACCAAGGCGAGAAAGGGGAGAGGGGGCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp ATCCTTTCCTGGGGCTCCCGGCTCACCGGGGATCCCTGCAGCACCTaGCTCTCCCTTGGGTCCTGTGAGTCCTCGAACTCCAATCGATCC +
Preference number: 5 (lower is better)
Translates to: ILSWGSRLTGDPCST*LSLGSCESSNSNRS
Trigger: GGATCGATTGGAGTTCGAGGACTCACAGGACCCAAGGGAGAGCCAGGTGCTGCAGGGATCCCCGGTGAGCCGGGAGCCCCAGGAAAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTCCCACAGCAAACAGCTaGACTCCCTGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: APNGAQQDPAETLPPPGTPTANS*TPCPFS
Trigger: GCTGAAGGGGCAGGGAGTCAAGCTGTTTGCTGTGGG...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGGCAAGGATTGGCTACTaGGCTCAGAGAGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKARIGY*AQRAPG
Trigger: ACCTGGTGCTCTCTGAGCCAAGTAGCCAATCCTTGC...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAACTTCCAGGAGGACCTaGCGGGCCTGGAGCACCGGT +
Preference number: 5 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPTSRRT*RAWSTG
Trigger: ACCGGTGCTCCAGGCCCGCAAGGTCCTCCTGGAAGT...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGTCTCCCTTTTCTCCTTaGGCTCCAGCACCACCAGGA +
Preference number: 5 (lower is better)
Translates to: HSRTRLRPCHLQGLLATKSPFSP*APAPPG
Trigger: TCCTGGTGGTGCTGGAGCCAAAGGAGAAAAGGGAGA...CTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTTCTCCCACATCGCCTTaGATGCCTGGTACACCCCTG +
Preference number: 5 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSSPTSP*MPGTPL
Trigger: CAGGGGTGTACCAGGCATCAAAGGCGATGTGGGAGA...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAAGTCCTCGGTCACCTTaGGCTCCCGGCTCACCCAGC +
Preference number: 5 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPSPRSP*APGSPS
Trigger: GCTGGGTGAGCCGGGAGCCAAAGGTGACCGAGGACT...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGGGACTTCGCCTTGGTCACCCTaGGGTCCTGACTGCCCATCA +
Preference number: 5 (lower is better)
Translates to: APNGAQQDPAETLPPPGTSPWSP*GPDCPS
Trigger: TGATGGGCAGTCAGGACCCAAGGGTGACCAAGGCGA...AGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCGGGTTCCAAAACGATaGGCATTCCCTCCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHRVPKR*AFPPQP
Trigger: TGGCTGCGGAGGGAATGCCAATCGTTTTGGAACCCG...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATCTGGCTGTGGACCCCTaGGGGTGGGCAGCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHLAVDP*GWAAAL
Trigger: GAGCGCCGCTGCCCACCCCAAGGGGTCCACAGCCAG...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp CTGGCAGTGTCTGTGGGGCCCTCGGCACTTCCTGGCCAGTTCCTCTaGGCGGCCGCCAGGACAAGATATAACTGGATGCCCCAGACACTG +
Preference number: 5 (lower is better)
Translates to: LAVSVGPSALPGQFL*AAARTRYNWMPQTL
Trigger: CAGTGTCTGGGGCATCCAGTTATATCTTGTCCTGGCGGCCGCTCAGAGGAACTGGCCAGGAAGTGCCGAGGGCCCCACAGACACTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp TGTCGGGCTCAAGATGATGGGATGCAGGGTTTGCTCAACAGAAGATaGGGTGCGGGCAGTCAGAGAAGCGGCAGGCCCCACGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: CRAQDDGMQGLLNRR*GAGSQRSGRPHAVA
Trigger: GGCCACAGCGTGGGGCCTGCCGCTTCTCTGACTGCCCGCACCGCATCTTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAGCCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp TCACTGCCTGGCTCCCCCTTGGCACCCTTGAGTCCAGGAGGTCCTTaGTCTCTAGCCAGTCCAGGGCCTGGCTCTTCAATGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: SLPGSPLAPLSPGGP*SLASPGPGSSMATL
Trigger: CAAGGTGGCCATTGAAGAGCCAGGCCCTGGACTGGCTAGAGAGCAAGGACCTCCTGGACTCAAGGGTGCCAAGGGGGAGCCAGGCAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp GGCCCCCTCTCCCCTTTCTCGCCTTGGTCACCCTTGGGTCCTGACTaGCCATCAAAGCCTCTGTCACCCTTGGGACCGATCAGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: GPLSPFSPWSPLGPD*PSKPLSPLGPIRPS
Trigger: AGAAGGCCTGATCGGTCCCAAGGGTGACAGAGGCTTTGATGGGCAGTCAGGACCCAAGGGTGACCAAGGCGAGAAAGGGGAGAGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GATGTCCGTGACAGTGGAGTCTGGGGTCAGCGTCCGGCTGGACTCTaGACCACTGCCTGTCCTCCAGCTGATCCGAAATCCACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: DVRDSGVWGQRPAGL*TTACPPADPKSTGS
Trigger: GGAGCCAGTGGATTTCGGATCAGCTGGAGGACAGGCAGTGGTCCAGAGTCCAGCCGGACGCTGACCCCAGACTCCACTGTCACGGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp TTTGGATCCAGTCTCTCCACGGTCACCCTTAGGACCCGTAATTCCTaGGACACCAGGGAAACCCTGGCCGGGAGGACCGACCTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: FGSSLSTVTLRTRNS*DTRETLAGRTDLPW
Trigger: CCAGGGCAGGTCGGTCCTCCCGGCCAGGGTTTCCCTGGTGTCCCAGGAATTACGGGTCCTAAGGGTGACCGTGGAGAGACTGGATCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACCTCCTGTCGCTCACTaGGCAGTGGCTGCCCTAGCC +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSPPVAH*AVAALA
Trigger: GGCTAGGGCAGCCACTGCCAAGTGAGCGACAGGAGG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAAAGGTCCAGCCTGTCCTaGCAGTCCCGTTACTCCAGG +
Preference number: 5 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQRSSLS*QSRYSR
Trigger: CCTGGAGTAACGGGACTGCAAGGACAGGCTGGACCT...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACACCCGGCTCCCCCTTaGGACCTTGAGGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSHPAPP*DLEALV
Trigger: AACGAGGGCCTCAAGGTCCAAAGGGGGAGCCGGGTG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGGCCCAGGGTCACCCTaGGGTCCTCGGGGACCTTCT +
Preference number: 5 (lower is better)
Translates to: GITASGQGAGWTPVTSIHGPGSP*GPRGPS
Trigger: AGAAGGTCCCCGAGGACCCAAGGGTGACCCTGGGCC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTGGTCCCCGATCACCCTaGTCTCCTGCTGGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPGPRSP*SPAGPR
Trigger: TCGAGGCCCAGCAGGAGACAAGGGTGATCGGGGACC...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTCCATTCAGGCCTGGTTaGCCATCATCGCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSPFRPG*PSSPAF
Trigger: AAAGGCAGGCGATGATGGCAAACCAGGCCTGAATGG...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTCACCAGGGTCCCCCTaGGGGCCAGGTCTCCGCTCA +
Preference number: 5 (lower is better)
Translates to: GITASGQGAGWTPVTSIHSPGSP*GPGLRS
Trigger: TGAGCGGAGACCTGGCCCCAAGGGGGACCCTGGTGA...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp GTATCCTGTGGCACCGGGAACCCCAGTCCAGGTGATGCTGACAGATaGGCTGCCAGCCTGAGTCAAGTGGACTCTCCTCACTGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VSCGTGNPSPGDADR*AASLSQVDSPHWAQ
Trigger: CTGGGCCCAGTGAGGAGAGTCCACTTGACTCAGGCTGGCAGCTCATCTGTCAGCATCACCTGGACTGGGGTTCCCGGTGCCACAGGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp GGTTCCCATCGCAGCCTCAAGGAGTGCTCCCCGCTCTGCACAACTTaGAGAGTCTCCAGAAGTGCTGGGGTCGCAGGCGGTGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: GSHRSLKECSPLCTT*RVSRSAGVAGGVVM
Trigger: CATCACCACACCGCCTGCGACCCCAGCACTTCTGGAGACTCTTCAAGTTGTGCAGAGCGGGGAGCACTCCTTGAGGCTGCGATGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CAGTCACTTGGTAGTCCGTTAGTGGCCGGAGACCCTGGAGACGCGTaGTGGTCTCACCAGCCGGGATGTTCACCTCCTGTCGCTCACTTG +
Preference number: 5 (lower is better)
Translates to: QSLGSPLVAGDPGDA*WSHQPGCSPPVAHL
Trigger: CAAGTGAGCGACAGGAGGTGAACATCCCGGCTGGTGAGACCAGCACGCGTCTCCAGGGTCTCCGGCCACTAACGGACTACCAAGTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp AGCCTGGGCCATTATCCACAGCAAAGAAGTTCTGGATGGGGTCCGTaGCTGGTGCCAAGCGACGCAGCTGCTCTGGGTCAGCTCCCACCA +
Preference number: 5 (lower is better)
Translates to: SLGHYPQQRSSGWGP*LVPSDAAALGQLPP
Trigger: TGGTGGGAGCTGACCCAGAGCAGCTGCGTCGCTTGGCACCAGGCACGGACCCCATCCAGAACTTCTTTGCTGTGGATAATGGCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp TGCAGTCCCGTTACTCCAGGCTCCCCCTTCTGGCCCTTTGGACAGTaGACAGCACAAGGCCCTGTTTGCGGCTCTATGGTCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: CSPVTPGSPFWPFGQ*TAQGPVCGSMVTAA
Trigger: GGCAGCTGTGACCATAGAGCCGCAAACAGGGCCTTGTGCTGTGCACTGTCCAAAGGGCCAGAAGGGGGAGCCTGGAGTAACGGGACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp TGGCAGTGGTCCGAGCTGTCCCACTCACGGCCTCCCCGATGCTGTTaGCATAGAGGGCAACCACAGTCACTTGGTAGTCCGTTAGTGGCC +
Preference number: 5 (lower is better)
Translates to: WQWSELSHSRPPRCC*HRGQPQSLGSPLVA
Trigger: GGCCACTAACGGACTACCAAGTGACTGTGGTTGCCCTCTATGCCAACAGCATCGGGGAGGCCGTGAGTGGGACAGCTCGGACCACTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp ACGGCCCTCCAGCAGAGTATACAGCGTGAGACGGTACTCAGTGCCTaGCTGCAAACCATCCAGCTGATGGCGGGTCACATCAGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: TALQQSIQRETVLSA*LQTIQLMAGHIRGQ
Trigger: CTGCCCCCTGATGTGACCCGCCATCAGCTGGATGGTTTGCAGCCAGGCACTGAGTACCGTCTCACGCTGTATACTCTGCTGGAGGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GGAGTGCTCCCCGCTCTGCACAACTTGAAGAGTCTCCAGAAGTGCTaGGGTCGCAGGCGGTGTGGTGATGACAATGGACACCGGTGCACC +
Preference number: 5 (lower is better)
Translates to: GVLPALHNLKSLQKC*GRRRCGDDNGHRCT
Trigger: GGTGCACCGGTGTCCATTGTCATCACCACACCGCCTGCGACCCCAGCACTTCTGGAGACTCTTCAAGTTGTGCAGAGCGGGGAGCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATCACTCTGTGGGAGCTaGAGGTCCCTGGCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQSLCGS*RSLAVS
Trigger: AGACACTGCCAGGGACCTCAAGCTCCCACAGAGTGA...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAAGGTCCAGCCTGTCCTaGCAGTCCCGTTACTCCAGG +
Preference number: 5 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPRSSLS*QSRYSR
Trigger: CCTGGAGTAACGGGACTGCAAGGACAGGCTGGACCT...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAAGCCCCTCTCGCCTTTaGCCTGGGTACTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPSPSRL*PGYFQE
Trigger: CTCCTGGAAGTACCCAGGCAAAAGGCGAGAGGGGCT...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAGCGCCCTGCTCTCCTTaGCTTCCAGAAGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPAPCSP*LPEAPL
Trigger: CAGAGGAGCTTCTGGAAGCAAAGGAGAGCAGGGCGC...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGCCCAGGGTCACCCTaGGGTCCTCGGGGACCTTCT +
Preference number: 5 (lower is better)
Translates to: NSESSARKAGATMGICPWGPGSP*GPRGPS
Trigger: AGAAGGTCCCCGAGGACCCAAGGGTGACCCTGGGCC...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCGCAGGGCCGACACCTaGATGCCAGCAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLRRADT*MPAVSS
Trigger: GCTGGAAACTGCTGGCATCAAGGTGTCGGCCCTGCG...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCATCTTCAATGGCCACCTaGGGGCCAGGAGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSSSMAT*GPGGPG
Trigger: ACCTGGCCCTCCTGGCCCCAAGGTGGCCATTGAAGA...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTTCTTCAATGGCCACCTaGGGGCCAGGAGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPSSMAT*GPGGPG
Trigger: ACCTGGCCCTCCTGGCCCCAAGGTGGCCATTGAAGA...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAAGTCCTCGGTCACCTTaGGCTCCCGGCTCACCCAGC +
Preference number: 5 (lower is better)
Translates to: PNSESSARKAGATMGICPSPRSP*APGSPS
Trigger: GCTGGGTGAGCCGGGAGCCAAAGGTGACCGAGGACT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp CGTGGTGAAGAGCGGCCCCCGTGCGAGTGTTACCACCTTTATAGCTaGGCTCACGGATGGCTCGGATGGTGTCACTCCCAGAGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: RGEERPPCECYHLYS*AHGWLGWCHSQSQV
Trigger: CACTTGGCTCTGGGAGTGACACCATCCGAGCCATCCGTGAGCTCAGCTATAAAGGTGGTAACACTCGCACGGGGGCCGCTCTTCACCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp TTGCAGGAGTGGCCACCTCACGGCCCTCCAGCAGAGTATACAGCGTaGGACGGTACTCAGTGCCTGGCTGCAAACCATCCAGCTGATGGC +
Preference number: 5 (lower is better)
Translates to: LQEWPPHGPPAEYTA*DGTQCLAANHPADG
Trigger: GCCATCAGCTGGATGGTTTGCAGCCAGGCACTGAGTACCGTCTCACGCTGTATACTCTGCTGGAGGGCCGTGAGGTGGCCACTCCTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CCACGCTGTGGCCAAATAGGGCGCTCACGGTCACCTCATAGTCCGTaGCAGGCTCCAAGTGATCTAGAAACACTGACCCCTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PRCGQIGRSRSPHSP*QAPSDLETLTPVQG
Trigger: GCCCTGGACAGGGGTCAGTGTTTCTAGATCACTTGGAGCCTGGCACGGACTATGAGGTGACCGTGAGCGCCCTATTTGGCCACAGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CAAGGAGTGCTCCCCGCTCTGCACAACTTGAAGAGTCTCCAGAAGTaGTGGGGTCGCAGGCGGTGTGGTGATGACAATGGACACCGGTGC +
Preference number: 5 (lower is better)
Translates to: QGVLPALHNLKSLQK*WGRRRCGDDNGHRC
Trigger: GCACCGGTGTCCATTGTCATCACCACACCGCCTGCGACCCCAGCACTTCTGGAGACTCTTCAAGTTGTGCAGAGCGGGGAGCACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GGTACCCTCCTCCAGGCCACCAGGAGGCTGTGCGATGTGATGTTCTaGAGGCTCAATTCTAGCCCTTCCTTGGCAGTGGTCCGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: GTLLQATRRLCDVMF*RLNSSPSLAVVRAV
Trigger: GACAGCTCGGACCACTGCCAAGGAAGGGCTAGAATTGAGCCTCCAGAACATCACATCGCACAGCCTCCTGGTGGCCTGGAGGAGGGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp CCCACCACTGAGGTCCCGCCATGTTACACGGTAGCCATTAGCACCTaGTACCCTCCTCCAGGCCACCAGGAGGCTGTGCGATGTGATGTT +
Preference number: 5 (lower is better)
Translates to: PTTEVPPCYTVAIST*YPPPGHQEAVRCDV
Trigger: AACATCACATCGCACAGCCTCCTGGTGGCCTGGAGGAGGGTACCAGGTGCTAATGGCTACCGTGTAACATGGCGGGACCTCAGTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp AAGGTTGTCTGGCTCCCAGGAAGCAATAGAGTCCGCTCGACCCCCTaGGTGGTGCGTACAGTGAAACGGTACTCAGTGGCCCCAGGGACT +
Preference number: 5 (lower is better)
Translates to: KVVWLPGSNRVRSTP*VVRTVKRYSVAPGT
Trigger: AGTCCCTGGGGCCACTGAGTACCGTTTCACTGTACGCACCACCCAGGGGGTCGAGCGGACTCTATTGCTTCCTGGGAGCCAGACAACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GGACAACAAGTGGGGCTTCTGGATCTCTGTGGATCGTTAGGATGCTaGCATCACCCTCCTGAGCACCCACTCGAGCAGACACCCGCACCG +
Preference number: 5 (lower is better)
Translates to: GQQVGLLDLCGSLGC*HHPPEHPLEQTPAP
Trigger: CGGTGCGGGTGTCTGCTCGAGTGGGTGCTCAGGAGGGTGATGCCAGCATCCTAACGATCCACAGAGATCCAGAAGCCCCACTTGTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GTCCTCACAACCACAGAGGCGGGGGCTCCATCCACACCAGCTACGTaGGTTCTCACACGCACTATATACTCTGTGTCCGGCTCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: VLTTTEAGAPSTPAT*VLTRTIYSVSGSSP
Trigger: TGGGCTGGAGCCGGACACAGAGTATATAGTGCGTGTGAGAACCCACGTAGCTGGTGTGGATGGAGCCCCCGCCTCTGTGGTTGTGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp CCAGGACCCTCCTCACAGCCTCTGCGTTGTGAGCATTGTCTCGAGTaGCATGCAAGAGGAACACCACGTCCACTGGGCCATGGGAACACG +
Preference number: 5 (lower is better)
Translates to: PGPSSQPLRCEHCLE*HARGTPRPLGHGNT
Trigger: CGTGTTCCCATGGCCCAGTGGACGTGGTGTTCCTCTTGCATGCCACTCGAGACAATGCTCACAACGCAGAGGCTGTGAGGAGGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp CTCTGTCCAAGCCTGGGCCATTATCCACAGCAAAGAAGTTCTGGATaGGGTCCGTGCCTGGTGCCAAGCGACGCAGCTGCTCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: LCPSLGHYPQQRSSG*GPCLVPSDAAALGQ
Trigger: CTGACCCAGAGCAGCTGCGTCGCTTGGCACCAGGCACGGACCCCATCCAGAACTTCTTTGCTGTGGATAATGGCCCAGGCTTGGACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp ACTGCTCTGTCCAAGCCTGGGCCATTATCCACAGCAAAGAAGTTCTaGATGGGGTCCGTGCCTGGTGCCAAGCGACGCAGCTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: TALSKPGPLSTAKKF*MGSVPGAKRRSCSG
Trigger: CCCAGAGCAGCTGCGTCGCTTGGCACCAGGCACGGACCCCATCCAGAACTTCTTTGCTGTGGATAATGGCCCAGGCTTGGACAGAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp CTGTCCTTGCAGTCCCGTTACTCCAGGCTCCCCCTTCTGGCCCTTTaGACAGTGCACAGCACAAGGCCCTGTTTGCGGCTCTATGGTCAC +
Preference number: 5 (lower is better)
Translates to: LSLQSRYSRLPLLAL*TVHSTRPCLRLYGH
Trigger: GTGACCATAGAGCCGCAAACAGGGCCTTGTGCTGTGCACTGTCCAAAGGGCCAGAAGGGGGAGCCTGGAGTAACGGGACTGCAAGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCCACAGCAAACAGCTaGACTCCCTGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPPTANS*TPCPFS
Trigger: GCTGAAGGGGCAGGGAGTCAAGCTGTTTGCTGTGGG...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATTTGTACTCGCAAGGATaGGCTACTTGGCTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHLYSQG*ATWLRE
Trigger: CTCTCTGAGCCAAGTAGCCAATCCTTGCGAGTACAA...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATCCGGGCCTCAGTTTGTACTCGCAAGGATaGGCTACTTGGCTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: TLPPPGTAGHQAHHPGLSLYSQG*ATWLRE
Trigger: CTCTCTGAGCCAAGTAGCCAATCCTTGCGAGTACAA...ACTGAGGCCCGGATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATGCCATACTTGGTACTTaGTTGCTGGCTCCAGACCAA +
Preference number: 5 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHAILGT*LLAPDQ
Trigger: TTGGTCTGGAGCCAGCAACAAAGTACCAAGTATGGC...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATGACAGTCAGCCATACTaGGTACTTTGTTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHDSQPY*VLCCWL
Trigger: GAGCCAGCAACAAAGTACCAAGTATGGCTGACTGTC...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TGCCCACAGCCACCCCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAACGGCGACCAGGAGCATaGGATGCTAAGAGGTATCTG +
Preference number: 5 (lower is better)
Translates to: CPQPPPTVSHLPGKRAPQRRPGA*DAKRYL
Trigger: CAGATACCTCTTAGCATCCAATGCTCCTGGTCGCCG...TTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGGGGTGGCTGTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACCCCGGGTCCCCAGCTTaGCCTGAAGCACCATGTAGC +
Preference number: 5 (lower is better)
Translates to: GITASGQGAGWTPVTSIHPGSPA*PEAPCS
Trigger: GCTACATGGTGCTTCAGGCAAAGCTGGGGACCCGGG...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACCCGGGTCCCCAGCTTaGCCTGAAGCACCATGTAGC +
Preference number: 5 (lower is better)
Translates to: PNSESSARKAGATMGICPPGSPA*PEAPCS
Trigger: GCTACATGGTGCTTCAGGCAAAGCTGGGGACCCGGG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCCTGGAGTCCAGGATaGCCAGGAGCTCCACGTTCA +
Preference number: 5 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLPWSPG*PGAPRS
Trigger: TGAACGTGGAGCTCCTGGCAATCCTGGACTCCAGGG...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAAGGCCCTGTTCCCCTTaGGATCCAGTCTCTCCACGG +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSRPCSP*DPVSPR
Trigger: CCGTGGAGAGACTGGATCCAAAGGGGAACAGGGCCT...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACCCTGTCTCCCCCACTaGTCCGGGCAAACCTGGAGA +
Preference number: 5 (lower is better)
Translates to: PNSESSARKAGATMGICPPCLPH*SGQTWR
Trigger: TCTCCAGGTTTGCCCGGACAAGTGGGGGAGACAGGG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGGCACCTGGCTCTCCCTaGGGTCCTGTGAGTCCTCGA +
Preference number: 5 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGAPGSP*GPVSPR
Trigger: TCGAGGACTCACAGGACCCAAGGGAGAGCCAGGTGC...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp GGCTCCAGGGACAAGTCCCCAGGCCACCCTAATTCTTGTTGCATCTaGTGCGACAACCCGCAGTCCTGGGACAACAAGTGGGGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GSRDKSPGHPNSCCI*CDNPQSWDNKWGFW
Trigger: CCAGAAGCCCCACTTGTTGTCCCAGGACTGCGGGTTGTCGCATCAGATGCAACAAGAATTAGGGTGGCCTGGGGACTTGTCCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp CCGGGAACCCCAGTCCAGGTGATGCTGACAGATGAGCTGCCAGCCTaGGTCAAGTGGACTCTCCTCACTGGGCCCAGTGGATCAGTTCTA +
Preference number: 5 (lower is better)
Translates to: PGTPVQVMLTDELPA*VKWTLLTGPSGSVL
Trigger: TAGAACTGATCCACTGGGCCCAGTGAGGAGAGTCCACTTGACTCAGGCTGGCAGCTCATCTGTCAGCATCACCTGGACTGGGGTTCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp AAGCTGGGAACCAGCTGTATCCGCAGCATAACCGGGGAGGGGTCGTaGTCCAGACGCAATAAACTGGCCCTGGCAGGCACAGTGCTGACT +
Preference number: 5 (lower is better)
Translates to: KLGTSCIRSITGEGS*SRRNKLALAGTVLT
Trigger: AGTCAGCACTGTGCCTGCCAGGGCCAGTTTATTGCGTCTGGATCACGACCCCTCCCCGGTTATGCTGCGGATACAGCTGGTTCCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CTTCCTTGGCAGTGGTCCGAGCTGTCCCACTCACGGCCTCCCCGATaGTGTTGGCATAGAGGGCAACCACAGTCACTTGGTAGTCCGTTA +
Preference number: 5 (lower is better)
Translates to: LPWQWSELSHSRPPR*CWHRGQPQSLGSPL
Trigger: TAACGGACTACCAAGTGACTGTGGTTGCCCTCTATGCCAACAGCATCGGGGAGGCCGTGAGTGGGACAGCTCGGACCACTGCCAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CTGGGACAACAAGTGGGGCTTCTGGATCTCTGTGGATCGTTAGGATaGTGGCATCACCCTCCTGAGCACCCACTCGAGCAGACACCCGCA +
Preference number: 5 (lower is better)
Translates to: LGQQVGLLDLCGSLG*WHHPPEHPLEQTPA
Trigger: TGCGGGTGTCTGCTCGAGTGGGTGCTCAGGAGGGTGATGCCAGCATCCTAACGATCCACAGAGATCCAGAAGCCCCACTTGTTGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp AAGAAGTTCTGGATGGGGTCCGTGCCTGGTGCCAAGCGACGCAGCTaGTCTGGGTCAGCTCCCACCAAACTCAGTGCCATCACCTTAAGC +
Preference number: 5 (lower is better)
Translates to: KKFWMGSVPGAKRRS*SGSAPTKLSAITLS
Trigger: GCTTAAGGTGATGGCACTGAGTTTGGTGGGAGCTGACCCAGAGCAGCTGCGTCGCTTGGCACCAGGCACGGACCCCATCCAGAACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp GCCATTATCCACAGCAAAGAAGTTCTGGATGGGGTCCGTGCCTGGTaGCAAGCGACGCAGCTGCTCTGGGTCAGCTCCCACCAAACTCAG +
Preference number: 5 (lower is better)
Translates to: AIIHSKEVLDGVRAW*QATQLLWVSSHQTQ
Trigger: CTGAGTTTGGTGGGAGCTGACCCAGAGCAGCTGCGTCGCTTGGCACCAGGCACGGACCCCATCCAGAACTTCTTTGCTGTGGATAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CACCAGGATTCCCACTTTCTCCCCGAGGTCCTTTGTCACCATCTATaGCCCGAGGCCCTCGTTCACCCATATCCCCTTTGGCACCTCGTG +
Preference number: 5 (lower is better)
Translates to: HQDSHFLPEVLCHHL*PEALVHPYPLWHLV
Trigger: CACGAGGTGCCAAAGGGGATATGGGTGAACGAGGGCCTCGGGGCATAGATGGTGACAAAGGACCTCGGGGAGAAAGTGGGAATCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp ACACGATGTCAGCAGCATAAAGGCGTGTGCAGGTCACTCTATCTCTaGGCTGGGCCCACACTTCCGGCGCTCCCATCAGGATCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TRCQQHKGVCRSLYL*AGPTLPALPSGSLQ
Trigger: CTGCAGAGATCCTGATGGGAGCGCCGGAAGTGTGGGCCCAGCCCAGAGATAGAGTGACCTGCACACGCCTTTATGCTGCTGACATCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp ACAGGACCATCACGCCTGGCACTTGCTGACGGCGACCAGGAGCATTaGATGCTAAGAGGTATCTGTGAGCTGTGGTCACGGCTGTGCCGA +
Preference number: 5 (lower is better)
Translates to: TGPSRLALADGDQEH*MLRGICELWSRLCR
Trigger: TCGGCACAGCCGTGACCACAGCTCACAGATACCTCTTAGCATCCAATGCTCCTGGTCGCCGTCAGCAAGTGCCAGGCGTGATGGTCCTGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp ATCTTCTCCAGGGTCTCCAGGGTCTCCGTTTTTCCCATTCAGGCCTaGTTTGCCATCATCGCCTGCCTTTCCCGGAACTCCAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: IFSRVSRVSVFPIQA*FAIIACLSRNSRRA
Trigger: GGCCCTCCTGGAGTTCCGGGAAAGGCAGGCGATGATGGCAAACCAGGCCTGAATGGGAAAAACGGAGACCCTGGAGACCCTGGAGAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GACCCGGCTGAGACCCTGCCACCTCCAGGGACTGCTGGCCACCAAGCGCATCATGGAAGCATTAAGGATTaGCAGTTTCGACACACTGCC +
Preference number: 5 (lower is better)
Translates to: DPAETLPPPGTAGHQAHHGSIKD*QFRHTA
Trigger: GGCAGTGTGTCGAAACTGCAAATCCTTAATGCTTCC...ATGATGCGCTTGGTGGCCAGCAGTCCCTGGAGGTGGCAGGGTCTCAGCCGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAAGCCCCTCTCGCCTTTaGCCTGGGTACTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PNSESSARKAGATMGICPSPSRL*PGYFQE
Trigger: CTCCTGGAAGTACCCAGGCAAAAGGCGAGAGGGGCT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGTCCTCGGGGACCTTCTaGTCCAGGCTCTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGSSGTF*SRLSLV
Trigger: GACAAGGGAGAGCCTGGACAAGAAGGTCCCCGAGGA...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACCCCTGGAGTCCAGGATaGCCAGGAGCTCCACGTTCA +
Preference number: 5 (lower is better)
Translates to: GITASGQGAGWTPVTSIHPWSPG*PGAPRS
Trigger: TGAACGTGGAGCTCCTGGCAATCCTGGACTCCAGGG...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCGCAGGGCCGACACCTaGATGCCAGCAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: NSESSARKAGATMGICPWRRADT*MPAVSS
Trigger: GCTGGAAACTGCTGGCATCAAGGTGTCGGCCCTGCG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTTCTCCCACATCGCCTTaGATGCCTGGTACACCCCTG +
Preference number: 5 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPSPTSP*MPGTPL
Trigger: CAGGGGTGTACCAGGCATCAAAGGCGATGTGGGAGA...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGCCCTGTCTCCCCCACTaGTCCGGGCAAACCTGGAGA +
Preference number: 5 (lower is better)
Translates to: NSESSARKAGATMGICPWPCLPH*SGQTWR
Trigger: TCTCCAGGTTTGCCCGGACAAGTGGGGGAGACAGGG...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCATCTCCCTTGTCTCCTTaGAGTCCAGAGGCGCCAGGT +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSSPLSP*SPEAPG
Trigger: ACCTGGCGCCTCTGGACTCAAAGGAGACAAGGGAGA...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGCTCCCGGGTCTCCCTaGTCTCCTTTGAGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GITASGQGAGWTPVTSIHAPGSP*SPLSPE
Trigger: CTCTGGACTCAAAGGAGACAAGGGAGACCCGGGAGC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp AACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGTCACCCTTGTCACCCTaGAGCCCTGCAGCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: NSESSARKAGATMGICPWSPLSP*SPAAPA
Trigger: TGCTGGCGCTGCAGGGCTCAAGGGTGACAAGGGTGA...CCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGGCACCTGGCTCTCCCTaGGGTCCTGTGAGTCCTCGA +
Preference number: 5 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLAPGSP*GPVSPR
Trigger: TCGAGGACTCACAGGACCCAAGGGAGAGCCAGGTGC...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAATTCCTTTTTCACCCTaGAGGCCCCTGGGACCCATG +
Preference number: 5 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPIPFSP*RPLGPM
Trigger: CATGGGTCCCAGGGGCCTCAAGGGTGAAAAAGGAAT...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp ACGAGCCATCGAGTAAGAACACGATGTCAGCAGCATAAAGGCGTGTaGAGGTCACTCTATCTCTGGGCTGGGCCCACACTTCCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: TSHRVRTRCQQHKGV*RSLYLWAGPTLPAL
Trigger: GAGCGCCGGAAGTGTGGGCCCAGCCCAGAGATAGAGTGACCTGCACACGCCTTTATGCTGCTGACATCGTGTTCTTACTCGATGGCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp GCAGCACCAGCCCCTCCAGGAATCCTCGCACTTCTCGAAAGTTGCTaGGGCCAATGGACGACGAGCCATCGAGTAAGAACACGATGTCAG +
Preference number: 5 (lower is better)
Translates to: AAPAPPGILALLESC*GQWTTSHRVRTRCQ
Trigger: CTGACATCGTGTTCTTACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACTTTCGAGAAGTGCGAGGATTCCTGGAGGGGCTGGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp GAAAGGAGGATGGATGTCGGGCTCAAGATGATGGGATGCAGGGTTTaGTCAACAGAAGATGCGGTGCGGGCAGTCAGAGAAGCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: ERRMDVGLKMMGCRV*STEDAVRAVREAAG
Trigger: GCCTGCCGCTTCTCTGACTGCCCGCACCGCATCTTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAGCCCGACATCCATCCTCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp TACTCAGTGGCCCCAGGGACTGGGTTCCAAGACACTCGCACCCGCTaGCCAGGTAGTTCTATGGCTTGTAAATTCATCACCGGGCTCACC +
Preference number: 5 (lower is better)
Translates to: YSVAPGTGFQDTRTR*PGSSMACKFITGLT
Trigger: GGTGAGCCCGGTGATGAATTTACAAGCCATAGAACTACCTGGGCAGCGGGTGCGAGTGTCTTGGAACCCAGTCCCTGGGGCCACTGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GGACTGGGTTCCAAGACACTCGCACCCGCTGCCCAGGTAGTTCTATaGCTTGTAAATTCATCACCGGGCTCACCAGCTGCTCTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GLGSKTLAPAAQVVL*LVNSSPGSPAALAL
Trigger: CAGGGCTAGAGCAGCTGGTGAGCCCGGTGATGAATTTACAAGCCATAGAACTACCTGGGCAGCGGGTGCGAGTGTCTTGGAACCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp TCGCAAGATGATGCCAAGATCATGGGAACTATTCAGTGGGAACAGTaGGGAGGGCCGGTGGCTGTAAGTCAGCAGGCCGACCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SQDDAKIMGTIQWEQ*GGPVAVSQQADLSS
Trigger: GCTGCTCAGGTCGGCCTGCTGACTTACAGCCACCGGCCCTCCCCACTGTTCCCACTGAATAGTTCCCATGATCTTGGCATCATCTTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCACCCGCTCTGCACAACTaGAAGAGTCTCCAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSPALHN*KSLQKC
Trigger: GCACTTCTGGAGACTCTTCAAGTTGTGCAGAGCGGG...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATCCCCCTTCTGGCCCTTaGGACAGTGCACAGCACAAG +
Preference number: 5 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHPPSGP*DSAQHK
Trigger: CTTGTGCTGTGCACTGTCCAAAGGGCCAGAAGGGGG...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGCGCCCTGCTCTCCTTaGCTTCCAGAAGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHAPCSP*LPEAPL
Trigger: CAGAGGAGCTTCTGGAAGCAAAGGAGAGCAGGGCGC...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGTCCTCGGGGACCTTCTaGTCCAGGCTCTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLSSGTF*SRLSLV
Trigger: GACAAGGGAGAGCCTGGACAAGAAGGTCCCCGAGGA...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGTCTCCCCGAGGTCCTTaGTCACCATCTATGCCCCGA +
Preference number: 5 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGSPRGP*SPSMPR
Trigger: TCGGGGCATAGATGGTGACAAAGGACCTCGGGGAGA...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTATTCCTTTTTCACCCTaGAGGCCCCTGGGACCCATG +
Preference number: 5 (lower is better)
Translates to: TTLAPNGAQQDPAETLPPIPFSP*RPLGPM
Trigger: CATGGGTCCCAGGGGCCTCAAGGGTGAAAAAGGAAT...AGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACCGGGTTCCAAAACGATaGGCATTCCCTCCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GITASGQGAGWTPVTSIHRVPKR*AFPPQP
Trigger: TGGCTGCGGAGGGAATGCCAATCGTTTTGGAACCCG...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp CAGGCACCAAGTTCCAGGAAAGGAGGATGGATGTCGGGCTCAAGATaGTGGGATGCAGGGTTTGCTCAACAGAAGATGCGGTGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: QAPSSRKGGWMSGSR*WDAGFAQQKMRCGQ
Trigger: CTGCCCGCACCGCATCTTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAGCCCGACATCCATCCTCCTTTCCTGGAACTTGGTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp TACAGCGTGAGACGGTACTCAGTGCCTGGCTGCAAACCATCCAGCTaGTGGCGGGTCACATCAGGGGGCAGTTCCACTTTCTGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: YSVRRYSVPGCKPSS*WRVTSGGSSTFCGV
Trigger: AACACCACAGAAAGTGGAACTGCCCCCTGATGTGACCCGCCATCAGCTGGATGGTTTGCAGCCAGGCACTGAGTACCGTCTCACGCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp CTCTCCCTTGGGTCCTGTGAGTCCTCGAACTCCAATCGATCCAGCTaGGCCTTTGTCACCTGGCTCTCCTTTGGAACCCTTGTCACCAGG +
Preference number: 5 (lower is better)
Translates to: LSLGSCESSNSNRSS*AFVTWLSFGTLVTR
Trigger: CCTGGTGACAAGGGTTCCAAAGGAGAGCCAGGTGACAAAGGCTCAGCTGGATCGATTGGAGTTCGAGGACTCACAGGACCCAAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp AAGGCAGCACCAGCCCCTCCAGGAATCCTCGCACTTCTCGAAAGTTaGTGCGGCCAATGGACGACGAGCCATCGAGTAAGAACACGATGT +
Preference number: 5 (lower is better)
Translates to: KAAPAPPGILALLES*CGQWTTSHRVRTRC
Trigger: ACATCGTGTTCTTACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACTTTCGAGAAGTGCGAGGATTCCTGGAGGGGCTGGTGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp TCAGCTCCCACCAAACTCAGTGCCATCACCTTAAGCCCAGAAGTCTaGGCCTCACGAATGGGGCTGAGTATGTCCCCTCTCAGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SAPTKLSAITLSPEV*ASRMGLSMSPLRGS
Trigger: TGAGCCTCTGAGAGGGGACATACTCAGCCCCATTCGTGAGGCCCAGACTTCTGGGCTTAAGGTGATGGCACTGAGTTTGGTGGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAAGAAGAAATCGCTGGTaGGCTGTGAGGCCACACGCT +
Preference number: 5 (lower is better)
Translates to: PNSESSARKAGATMGICPRRNRW*AVRPHA
Trigger: AGCGTGTGGCCTCACAGCCAACCAGCGATTTCTTCT...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGAGAAGAAATCGCTGGTaGGCTGTGAGGCCACACGCT +
Preference number: 5 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGRRNRW*AVRPHA
Trigger: AGCGTGTGGCCTCACAGCCAACCAGCGATTTCTTCT...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCAGCAAGGATTGGCTACTaGGCTCAGAGAGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: PNSESSARKAGATMGICPARIGY*AQRAPG
Trigger: ACCTGGTGCTCTCTGAGCCAAGTAGCCAATCCTTGC...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATGGGCCCGCTCTGCACAACTaGAAGAGTCTCCAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: TVSHLPGKRAPQWGFVHGPALHN*KSLQKC
Trigger: GCACTTCTGGAGACTCTTCAAGTTGTGCAGAGCGGG...CCCATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGTCACTCTGTGGGAGCTaGAGGTCCCTGGCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLSLCGS*RSLAVS
Trigger: AGACACTGCCAGGGACCTCAAGCTCCCACAGAGTGA...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCACGGCGACCAGGAGCATaGGATGCTAAGAGGTATCTG +
Preference number: 5 (lower is better)
Translates to: PNSESSARKAGATMGICPRRPGA*DAKRYL
Trigger: CAGATACCTCTTAGCATCCAATGCTCCTGGTCGCCG...TGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCATGTCCAGGCTCTCCCTaGTCTCTGGATTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSCPGSP*SLDSMP
Trigger: AGGCATTGAATCCAGAGACAAGGGAGAGCCTGGACA...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACCCATTCAGGCCTGGTTaGCCATCATCGCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: GITASGQGAGWTPVTSIHPFRPG*PSSPAF
Trigger: AAAGGCAGGCGATGATGGCAAACCAGGCCTGAATGG...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGTCTCCCTTGTCTCCTTaGAGTCCAGAGGCGCCAGGT +
Preference number: 5 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLSPLSP*SPEAPG
Trigger: ACCTGGCGCCTCTGGACTCAAAGGAGACAAGGGAGA...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp CACCCTCTCGGTCTCCAACAAGCGCCGTCACTCTCACGGAGTAGCTaGCTCCTCCTTCGAGATCCCGTATCTCTGCAGACTCTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: HPLGLQQAPSLSRSS*LLLRDPVSLQTLCF
Trigger: GAAACAAAGAGTCTGCAGAGATACGGGATCTCGAAGGAGGAGTCAGCTACTCCGTGAGAGTGACGGCGCTTGTTGGAGACCGAGAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CCAGGTAGTTCTATGGCTTGTAAATTCATCACCGGGCTCACCAGCTaGTCTAGCCCTGTAGGAACCACGGTTGCAGGAGTGGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: PGSSMACKFITGLTS*SSPVGTTVAGVATS
Trigger: TGAGGTGGCCACTCCTGCAACCGTGGTTCCTACAGGGCTAGAGCAGCTGGTGAGCCCGGTGATGAATTTACAAGCCATAGAACTACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp ACGGATCTTTCGCAAGATGATGCCAAGATCATGGGAACTATTCAGTaGGAACAGTGGGGAGGGCCGGTGGCTGTAAGTCAGCAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: TDLSQDDAKIMGTIQ*EQWGGPVAVSQQAD
Trigger: GTCGGCCTGCTGACTTACAGCCACCGGCCCTCCCCACTGTTCCCACTGAATAGTTCCCATGATCTTGGCATCATCTTGCGAAAGATCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp CAGGAGCCCTCATCCAAGGGTAGGGAGCAGAGATCTGAACCTCTCTaGTCCCAGCCCTTAATCTCGGCTTCACCATCCCATGGAACTTCA +
Preference number: 5 (lower is better)
Translates to: QEPSSKGREQRSEPL*SQPLISASPSHGTS
Trigger: TGAAGTTCCATGGGATGGTGAAGCCGAGATTAAGGGCTGGGACCAGAGAGGTTCAGATCTCTGCTCCCTACCCTTGGATGAGGGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGATCAGGATGCAGACCTaGGGGACACCAGGACGTGTT +
Preference number: 5 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLIRMQT*GTPGRV
Trigger: AACACGTCCTGGTGTCCCCAAGGTCTGCATCCTGAT...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAGACAGTCAGCCATACTaGGTACTTTGTTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSDSQPY*VLCCWL
Trigger: GAGCCAGCAACAAAGTACCAAGTATGGCTGACTGTC...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCATCCCCACGATCACCTTaGTCACCCTTCACTGATATT +
Preference number: 5 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPSPRSP*SPFTDI
Trigger: AATATCAGTGAAGGGTGACAAAGGTGATCGTGGGGA...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGTCTCCCTTTTCTCCTTaGGCTCCAGCACCACCAGGA +
Preference number: 5 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLSPFSP*APAPPG
Trigger: TCCTGGTGGTGCTGGAGCCAAAGGAGAAAAGGGAGA...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp GAGTCAATAGAGGTATCCACCACGCGTAGTTCAGTGCTCGGGATGTaGGAGGGCTCAGTGTATGCAGTCACCTTCCTAGGGGGACCTTCT +
Preference number: 5 (lower is better)
Translates to: ESIEVSTTRSSVLGM*EGSVYAVTFLGGPS
Trigger: AGAAGGTCCCCCTAGGAAGGTGACTGCATACACTGAGCCCTCTCACATCCCGAGCACTGAACTACGCGTGGTGGATACCTCTATTGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CCAAGTGTATCCAGACCAAATTCTGTCTGTGGATCATCACTGTACTaGACTGTGGCAAACCGGACGCCCTGTGCACTGGCTGCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: PSVSRPNSVCGSSLY*TVANRTPCALAAPE
Trigger: CTCAGGAGCAGCCAGTGCACAGGGCGTCCGGTTTGCCACAGTGCAGTACAGTGATGATCCACAGACAGAATTTGGTCTGGATACACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CAGAGGTGTGTACTGAACCTTGTAGCCAGTCACAGGGCCACTGGCTaGTGTCCATTGTACTCGCAAGGATTGGCTACTTGGCTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: QRCVLNLVASHRATG*CPLYSQGLATWLRE
Trigger: CTCTCTGAGCCAAGTAGCCAATCCTTGCGAGTACAATGGACAGCAGCCAGTGGCCCTGTGACTGGCTACAAGGTTCAGTACACACCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GCCCCTCCAGGAATCCTCGCACTTCTCGAAAGTTGCTGCGGCCAATaGACGACGAGCCATCGAGTAAGAACACGATGTCAGCAGCATAAA +
Preference number: 5 (lower is better)
Translates to: APPGILALLESCCGQ*TTSHRVRTRCQQHK
Trigger: TTTATGCTGCTGACATCGTGTTCTTACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACTTTCGAGAAGTGCGAGGATTCCTGGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp CTGTCAGAGGTGTGTACTGAACCTTGTAGCCAGTCACAGGGCCACTaGCTGCTGTCCATTGTACTCGCAAGGATTGGCTACTTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: LSEVCTEPCSQSQGH*LLSIVLARIGYLAQ
Trigger: CTGAGCCAAGTAGCCAATCCTTGCGAGTACAATGGACAGCAGCCAGTGGCCCTGTGACTGGCTACAAGGTTCAGTACACACCTCTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp TTGTCTCGAGTGGCATGCAAGAGGAACACCACGTCCACTGGGCCATaGGAACACGCTGGTGTTTGTGTGACAGAGATCTCAGAACCTCGT +
Preference number: 5 (lower is better)
Translates to: LSRVACKRNTTSTGP*EHAGVCVTEISEPR
Trigger: ACGAGGTTCTGAGATCTCTGTCACACAAACACCAGCGTGTTCCCATGGCCCAGTGGACGTGGTGTTCCTCTTGCATGCCACTCGAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GTGAGCATTGTCTCGAGTGGCATGCAAGAGGAACACCACGTCCACTaGGCCATGGGAACACGCTGGTGTTTGTGTGACAGAGATCTCAGA +
Preference number: 5 (lower is better)
Translates to: VSIVSSGMQEEHHVH*AMGTRWCLCDRDLR
Trigger: TCTGAGATCTCTGTCACACAAACACCAGCGTGTTCCCATGGCCCAGTGGACGTGGTGTTCCTCTTGCATGCCACTCGAGACAATGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCACACACAACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGGGAAGCATTAAGGATTaGCAGTTTCGACACACTGCC +
Preference number: 5 (lower is better)
Translates to: AHTTLAPNGAQQDPAETLGSIKD*QFRHTA
Trigger: GGCAGTGTGTCGAAACTGCAAATCCTTAATGCTTCC...CAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GGTATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACGCCATACTTGGTACTTaGTTGCTGGCTCCAGACCAA +
Preference number: 5 (lower is better)
Translates to: GITASGQGAGWTPVTSIHAILGT*LLAPDQ
Trigger: TTGGTCTGGAGCCAGCAACAAAGTACCAAGTATGGC...GTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp TATCACAGCCTCGGGTCAAGGGGCAGGTTGGACACCAGTCACATCCATTCACTGTGTCCAGGCTCTCCCTaGTCTCTGGATTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: YHSLGSRGRLDTSHIHSLCPGSP*SLDSMP
Trigger: AGGCATTGAATCCAGAGACAAGGGAGAGCCTGGACA...CAGTGAATGGATGTGACTGGTGTCCAACCTGCCCCTTGACCCGAGGCTGTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp AAGTTCCAGGAAAGGAGGATGGATGTCGGGCTCAAGATGATGGGATaGAGGGTTTGCTCAACAGAAGATGCGGTGCGGGCAGTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: KFQERRMDVGLKMMG*RVCSTEDAVRAVRE
Trigger: TTCTCTGACTGCCCGCACCGCATCTTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAGCCCGACATCCATCCTCCTTTCCTGGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CACTCTCACGGAGTAGCTGACTCCTCCTTCGAGATCCCGTATCTCTaGAGACTCTTTGTTTCCTGGGAGTATCCGGTGTTTCATAGGGCC +
Preference number: 5 (lower is better)
Translates to: HSHGVADSSFEIPYL*RLFVSWEYPVFHRA
Trigger: GGCCCTATGAAACACCGGATACTCCCAGGAAACAAAGAGTCTGCAGAGATACGGGATCTCGAAGGAGGAGTCAGCTACTCCGTGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp TATCCAGACCAAATTCTGTCTGTGGATCATCACTGTACTGCACTGTaGCAAACCGGACGCCCTGTGCACTGGCTGCTCCTGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: YPDQILSVDHHCTAL*QTGRPVHWLLLRKA
Trigger: TGCCTTTCTCAGGAGCAGCCAGTGCACAGGGCGTCCGGTTTGCCACAGTGCAGTACAGTGATGATCCACAGACAGAATTTGGTCTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp GACTCCTCCTTCGAGATCCCGTATCTCTGCAGACTCTTTGTTTCCTaGGAGTATCCGGTGTTTCATAGGGCCACCTTCACTACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: DSSFEIPYLCRLFVS*EYPVFHRATFTTSP
Trigger: TGGGGACGTAGTGAAGGTGGCCCTATGAAACACCGGATACTCCCAGGAAACAAAGAGTCTGCAGAGATACGGGATCTCGAAGGAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp GCTTTTGGGCAGCTGTGTCCACTAAATCTTGGGATTTCCCATCTGTaGTCAGGATGCAGACCTTGGGGACACCAGGACGTGTTAGACGAG +
Preference number: 5 (lower is better)
Translates to: AFGQLCPLNLGISHL*SGCRPWGHQDVLDE
Trigger: CTCGTCTAACACGTCCTGGTGTCCCCAAGGTCTGCATCCTGATCACAGATGGGAAATCCCAAGATTTAGTGGACACAGCTGCCCAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp TACCACTTGGGTCCACGTAGGGGATGTCACGGATCTTTCGCAAGATaGTGCCAAGATCATGGGAACTATTCAGTGGGAACAGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: YHLGPRRGCHGSFAR*CQDHGNYSVGTVGR
Trigger: CCTCCCCACTGTTCCCACTGAATAGTTCCCATGATCTTGGCATCATCTTGCGAAAGATCCGTGACATCCCCTACGTGGACCCAAGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp TCAGGGTCGGCATTCTTGATTCCCACAGCAAACAGCTTGACTCCCTaGCCCTTCAGCTTTTGGGCAGCTGTGTCCACTAAATCTTGGGAT +
Preference number: 5 (lower is better)
Translates to: SGSAFLIPTANSLTP*PFSFWAAVSTKSWD
Trigger: ATCCCAAGATTTAGTGGACACAGCTGCCCAAAAGCTGAAGGGGCAGGGAGTCAAGCTGTTTGCTGTGGGAATCAAGAATGCCGACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 90 bp CCTACCCAAGTGACCCGTAGAACATCACTGGAAGCATTAAGGATTTaGAGTTTCGACACACTGCCCACAGGCTCAGGAGCAGTCCTCACA +
Preference number: 5 (lower is better)
Translates to: PTQVTRRTSLEALRI*SFDTLPTGSGAVLT
Trigger: TGTGAGGACTGCTCCTGAGCCTGTGGGCAGTGTGTCGAAACTGCAAATCCTTAATGCTTCCAGTGATGTTCTACGGGTCACTTGGGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp ACTCTAGCACCAAATGGAGCACAGCAGGACCCGGCTGAGACCCTGCCACCTCCAAAGATGCTGAAGTCATaGACGAAGAAGAAGAAATCG +
Preference number: 5 (lower is better)
Translates to: TLAPNGAQQDPAETLPPPKMLKS*TKKKKS
Trigger: CGATTTCTTCTTCTTCGTCAATGACTTCAGCATCTT...TGGAGGTGGCAGGGTCTCAGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp CCAACAGTGAGTCATCTGCCAGGAAAGCGGGCGCCACAATGGGGATTTGTCCATTCCCCACGATCACCTTaGTCACCCTTCACTGATATT +
Preference number: 5 (lower is better)
Translates to: PTVSHLPGKRAPQWGFVHSPRSP*SPFTDI
Trigger: AATATCAGTGAAGGGTGACAAAGGTGATCGTGGGGA...ATGGACAAATCCCCATTGTGGCGCCCGCTTTCCTGGCAGATGACTCACTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 90 bp GATGCTGAAGTCATTGACGAAGAAGAAGAAATCGCTGGTTGGCTGTaGGGCCACACGCTTCAGTTCCTCAGGGTCGGCATTCTTGATTCC +
Preference number: 5 (lower is better)
Translates to: DAEVIDEEEEIAGWL*GHTLQFLRVGILDS
Trigger: GGAATCAAGAATGCCGACCCTGAGGAACTGAAGCGTGTGGCCTCACAGCCAACCAGCGATTTCTTCTTCTTCGTCAATGACTTCAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS-3UTR CAA 90 bp GCTTTAATGCCCCGTCCCCTCCCATCAGCACCATGGTATCACAGCCTCGGGTCAAAGATGCTGAAGTCATaGACGAAGAAGAAGAAATCG +
Preference number: 5 (lower is better)
Translates to: ALMPRPLPSAPWYHSLGSKMLKS*TKKKKS
Trigger: CGATTTCTTCTTCTTCGTCAATGACTTCAGCATCTT...TGACCCGAGGCTGTGATACCATGGTGCTGATGGGAGGGGACGGGGCATTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 90 bp TTGATTCCCACAGCAAACAGCTTGACTCCCTGCCCCTTCAGCTTTTaGGCAGCTGTGTCCACTAAATCTTGGGATTTCCCATCTGTGATC +
Preference number: 5 (lower is better)
Translates to: LIPTANSLTPCPFSF*AAVSTKSWDFPSVI
Trigger: GATCACAGATGGGAAATCCCAAGATTTAGTGGACACAGCTGCCCAAAAGCTGAAGGGGCAGGGAGTCAAGCTGTTTGCTGTGGGAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GGGACACCAGGGAAACCCTGGCCGGGAGGACCGACCTaGCCTGGGAGACCCGGAGGACCCTGGAGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: GTPGKPWPGGPT*PGRPGGPWSPG
Trigger: TCCTGGACTCCAGGGTCCTCCGGGTCTCCCAGGGCAGGTCGGTCCTCCCGGCCAGGGTTTCCCTGGTGTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CCCCTGAACCACCAGCCCGGCCTGGGAGTCCAGGAATaGCAGGCTTTCCGGGTTCCCCCGCAAGGCCGGGTG +
Preference number: 6 (lower is better)
Translates to: PLNHQPGLGVQE*QAFRVPPQGRV
Trigger: CACCCGGCCTTGCGGGGGAACCCGGAAAGCCTGGCATTCCTGGACTCCCAGGCCGGGCTGGTGGTTCAGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CCTTGCCTGGAGGGCCTCGGTCACCAGGGTCCCCCTTaGGGCCAGGTCTCCGCTCAGGCACCGGTAGGAAGC +
Preference number: 6 (lower is better)
Translates to: PCLEGLGHQGPP*GQVSAQAPVGS
Trigger: GCTTCCTACCGGTGCCTGAGCGGAGACCTGGCCCCAAGGGGGACCCTGGTGACCGAGGCCCTCCAGGCAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp GGCCCTGGCTGGCCCGTCTCTCCTCGAGGTCCTGTCTaGCCAGGGAACCCAACAACACCAGGAGCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: GPGWPVSPRGPV*PGNPTTPGAPG
Trigger: CCCCGGGGCTCCTGGTGTTGTTGGGTTCCCTGGTCAGACAGGACCTCGAGGAGAGACGGGCCAGCCAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GGGTTTCCCATCCAGCCCACTCCGGCCATCCAGCCCTaGGGGTCCCCGATCACCCTTGTCTCCTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GFPIQPTPAIQP*GSPITLVSCWA
Trigger: GGCCCAGCAGGAGACAAGGGTGATCGGGGACCCCCAGGGCTGGATGGCCGGAGTGGGCTGGATGGGAAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp ACCAGGGAAACCCTGGCCGGGAGGACCGACCTGCCCTaGGAGACCCGGAGGACCCTGGAGTCCAGGATTGCC +
Preference number: 6 (lower is better)
Translates to: TRETLAGRTDLP*ETRRTLESRIA
Trigger: GGCAATCCTGGACTCCAGGGTCCTCCGGGTCTCCCAGGGCAGGTCGGTCCTCCCGGCCAGGGTTTCCCTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp TCCTTGCCTGGAGGGCCTCGGTCACCAGGGTCCCCCTaGGGGCCAGGTCTCCGCTCAGGCACCGGTAGGAAG +
Preference number: 6 (lower is better)
Translates to: SLPGGPRSPGSP*GPGLRSGTGRK
Trigger: CTTCCTACCGGTGCCTGAGCGGAGACCTGGCCCCAAGGGGGACCCTGGTGACCGAGGCCCTCCAGGCAAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp TGGCTTCCCTGTCTCCCCCACTTGTCCGGGCAAACCTGGAGAGCCTaGTGGACCCACGAGGCCGGAAGGGCCAGGAGGGCCAGGGAGTCC +
Preference number: 6 (lower is better)
Translates to: WLPCLPHLSGQTWRA*WTHEAGRARRARES
Trigger: GGACTCCCTGGCCCTCCTGGCCCTTCCGGCCTCGTGGGTCCACAAGGCTCTCCAGGTTTGCCCGGACAAGTGGGGGAGACAGGGAAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CTGGGCCCACACTTCCGGCGCTCCCATCAGGATCTCTaGAGCGCAGAGCGCAGCGACCAGGAGTCGCAGCCT +
Preference number: 6 (lower is better)
Translates to: LGPHFRRSHQDL*SAERSDQESQP
Trigger: AGGCTGCGACTCCTGGTCGCTGCGCTCTGCGCTGCAGAGATCCTGATGGGAGCGCCGGAAGTGTGGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp AGGTGGTCCCAAGGGACCTGGGGCACCTTCTCTCCCTaGAGGGCCTGCCAGACCCCTCTCTCCAACAGGCCC +
Preference number: 6 (lower is better)
Translates to: RWSQGTWGTFSP*RACQTPLSNRP
Trigger: GGGCCTGTTGGAGAGAGGGGTCTGGCAGGCCCTCCAGGGAGAGAAGGTGCCCCAGGTCCCTTGGGACCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GGCCCCACAAGTCCACGAGGTCCTTCCTGGCCAGGGTaGCCATCTTCACCCCGGACACCTGGCTCACCACGC +
Preference number: 6 (lower is better)
Translates to: GPTSPRGPSWPG*PSSPRTPGSPR
Trigger: GCGTGGTGAGCCAGGTGTCCGGGGTGAAGATGGCCACCCTGGCCAGGAAGGACCTCGTGGACTTGTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TGGGGCTCCCGGCTCACCGGGGATCCCTGCAGCACCTaGCTCTCCCTTGGGTCCTGTGAGTCCTCGAACTCC +
Preference number: 6 (lower is better)
Translates to: WGSRLTGDPCST*LSLGSCESSNS
Trigger: GGAGTTCGAGGACTCACAGGACCCAAGGGAGAGCCAGGTGCTGCAGGGATCCCCGGTGAGCCGGGAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp TGTCTCCCCCACTTGTCCGGGCAAACCTGGAGAGCCTaGTGGACCCACGAGGCCGGAAGGGCCAGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: CLPHLSGQTWRA*WTHEAGRARRA
Trigger: GGCCCTCCTGGCCCTTCCGGCCTCGTGGGTCCACAAGGCTCTCCAGGTTTGCCCGGACAAGTGGGGGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp GGCCCGGGAGGTCCCTCAATCACAGCTGAGTCACCCTaGTCACCCTTGAGCCCTGCAGCGCCAGCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: GPGGPSITAESP*SPLSPAAPAAP
Trigger: GGGCGCTGCTGGCGCTGCAGGGCTCAAGGGTGACAAGGGTGACTCAGCTGTGATTGAGGGACCTCCCGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp GGCCCGGGAGGTCCCTCAATCACAGCTGAGTCACCCTTGTCACCCTaGAGCCCTGCAGCGCCAGCAGCGCCCTTCTCTCCTTGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: GPGGPSITAESPLSP*SPAAPAAPFSPCSP
Trigger: GGGAGAGCAAGGAGAGAAGGGCGCTGCTGGCGCTGCAGGGCTCAAGGGTGACAAGGGTGACTCAGCTGTGATTGAGGGACCTCCCGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp GCACCTCGTGGCCCGGGAGGTCCCTCAATCACAGCTGAGTCACCCTaGTCACCCTTGAGCCCTGCAGCGCCAGCAGCGCCCTTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: APRGPGGPSITAESP*SPLSPAAPAAPFSP
Trigger: AGGAGAGAAGGGCGCTGCTGGCGCTGCAGGGCTCAAGGGTGACAAGGGTGACTCAGCTGTGATTGAGGGACCTCCCGGGCCACGAGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GCCACCCTCAGGTTGCCAGTGCAGGCGGAAGCCTGGTaGTCCGGGTACTGGTTCCCATCGCAGCCTCAAGGA +
Preference number: 6 (lower is better)
Translates to: ATLRLPVQAEAW*SGYWFPSQPQG
Trigger: TCCTTGAGGCTGCGATGGGAACCAGTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GTCAGGGACTGTTCCTGGCCACCCTCAGGTTGCCAGTaGAGGCGGAAGCCTGGTGCTCCGGGTACTGGTTCC +
Preference number: 6 (lower is better)
Translates to: VRDCSWPPSGCQ*RRKPGAPGTGS
Trigger: GGAACCAGTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGCCAGGAACAGTCCCTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CCCAAGGTCAGGGACTGTTCCTGGCCACCCTCAGGTTaGCAGTGCAGGCGGAAGCCTGGTGCTCCGGGTACT +
Preference number: 6 (lower is better)
Translates to: PKVRDCSWPPSG*QCRRKPGAPGT
Trigger: AGTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGCCAGGAACAGTCCCTGACCTTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TTGCCAGTGCAGGCGGAAGCCTGGTGCTCCGGGTACTaGTTCCCATCGCAGCCTCAAGGAGTGCTCCCCGCT +
Preference number: 6 (lower is better)
Translates to: LPVQAEAWCSGY*FPSQPQGVLPA
Trigger: AGCGGGGAGCACTCCTTGAGGCTGCGATGGGAACCAGTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CTGGCCACCCTCAGGTTGCCAGTGCAGGCGGAAGCCTaGTGCTCCGGGTACTGGTTCCCATCGCAGCCTCAA +
Preference number: 6 (lower is better)
Translates to: LATLRLPVQAEA*CSGYWFPSQPQ
Trigger: TTGAGGCTGCGATGGGAACCAGTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TTAGGACCCGTAATTCCTGGGACACCAGGGAAACCCTaGCCGGGAGGACCGACCTGCCCTGGGAGACCCGGA +
Preference number: 6 (lower is better)
Translates to: LGPVIPGTPGKP*PGGPTCPGRPG
Trigger: TCCGGGTCTCCCAGGGCAGGTCGGTCCTCCCGGCCAGGGTTTCCCTGGTGTCCCAGGAATTACGGGTCCTAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp TCCCAAGGTCAGGGACTGTTCCTGGCCACCCTCAGGTaGCCAGTGCAGGCGGAAGCCTGGTGCTCCGGGTAC +
Preference number: 6 (lower is better)
Translates to: SQGQGLFLATLR*PVQAEAWCSGY
Trigger: GTACCCGGAGCACCAGGCTTCCGCCTGCACTGGCAACCTGAGGGTGGCCAGGAACAGTCCCTGACCTTGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp GAGGCCCTTCTGGGCCAGGAAAGCCCCTCTCGCCTTTaGCCTGGGTACTTCCAGGAGGACCTTGCGGGCCTG +
Preference number: 6 (lower is better)
Translates to: EALLGQESPSRL*PGYFQEDLAGL
Trigger: CAGGCCCGCAAGGTCCTCCTGGAAGTACCCAGGCAAAAGGCGAGAGGGGCTTTCCTGGCCCAGAAGGGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp CTTTCTCCAGAGACTCCAGGGGGCCCAGGGTCACCCTaGGGTCCTCGGGGACCTTCTTGTCCAGGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LSPETPGGPGSP*GPRGPSCPGSP
Trigger: GGGAGAGCCTGGACAAGAAGGTCCCCGAGGACCCAAGGGTGACCCTGGGCCCCCTGGAGTCTCTGGAGAAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp GTCCCCTTTCTTTCCAGGAAACCCTGGCCCTCCACCGCCAGTGATTaGCCCAGGCTCACCCGGCTCCCCCTTTGGACCTTGAGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: VPFLSRKPWPSTASD*PRLTRLPLWTLRPS
Trigger: CGAGGGCCTCAAGGTCCAAAGGGGGAGCCGGGTGAGCCTGGGCAAATCACTGGCGGTGGAGGGCCAGGGTTTCCTGGAAAGAAAGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp GGAGGACCCTGGAGTCCAGGATTGCCAGGAGCTCCACGTTCACCCTaGGGGCCATCAGGGCCTTCTCTTCCAGGGGCACCCGAATCTCCC +
Preference number: 6 (lower is better)
Translates to: GGPWSPGLPGAPRSP*GPSGPSLPGAPESP
Trigger: GGGAGATTCGGGTGCCCCTGGAAGAGAAGGCCCTGATGGCCCCAAGGGTGAACGTGGAGCTCCTGGCAATCCTGGACTCCAGGGTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp GAGGCCCTGAGTCACCTGTGGGTCCTGCCCTTCCAGTaGGGCCAATGGGACCCCTGTCTCCAGGGTCTCCTT +
Preference number: 6 (lower is better)
Translates to: EALSHLWVLPFQ*GQWDPCLQGLL
Trigger: AAGGAGACCCTGGAGACAGGGGTCCCATTGGCCTCACTGGAAGGGCAGGACCCACAGGTGACTCAGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp GCTCTCCCTTCAGTCCACGTTCTCCAGGAAAGCCGATaGGGCCCTCCTTGCCTGGAGGGCCTCGGTCACCAG +
Preference number: 6 (lower is better)
Translates to: ALPSVHVLQESR*GPPCLEGLGHQ
Trigger: CTGGTGACCGAGGCCCTCCAGGCAAGGAGGGCCTCATCGGCTTTCCTGGAGAACGTGGACTGAAGGGAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp TTCTCCTTTAGGTCCAACAGGGCCGGGCAGACCTGGTaGCCCCGGCACACCAGGACTTCCCCGATCTCCGTC +
Preference number: 6 (lower is better)
Translates to: FSFRSNRAGQTW*PRHTRTSPISV
Trigger: GACGGAGATCGGGGAAGTCCTGGTGTGCCGGGGTCACCAGGTCTGCCCGGCCCTGTTGGACCTAAAGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GGTAGTCCGTTAGTGGCCGGAGACCCTGGAGACGCGTaGTGGTCTCACCAGCCGGGATGTTCACCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: GSPLVAGDPGDA*WSHQPGCSPPV
Trigger: GACAGGAGGTGAACATCCCGGCTGGTGAGACCAGCACGCGTCTCCAGGGTCTCCGGCCACTAACGGACTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp TGGATGGGGTCCGTGCCTGGTGCCAAGCGACGCAGCTaGTCTGGGTCAGCTCCCACCAAACTCAGTGCCATC +
Preference number: 6 (lower is better)
Translates to: WMGSVPGAKRRS*SGSAPTKLSAI
Trigger: GATGGCACTGAGTTTGGTGGGAGCTGACCCAGAGCAGCTGCGTCGCTTGGCACCAGGCACGGACCCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp TGGGGCCAGGTCTCCGCTCAGGCACCGGTAGGAAGCTaGCAGAACTCTCATCCCAGGTGTCCACGATCTCCC +
Preference number: 6 (lower is better)
Translates to: WGQVSAQAPVGS*QNSHPRCPRSP
Trigger: GGGAGATCGTGGACACCTGGGATGAGAGTTCTGGCAGCTTCCTACCGGTGCCTGAGCGGAGACCTGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GGGGTCCGTGCCTGGTGCCAAGCGACGCAGCTGCTCTaGGTCAGCTCCCACCAAACTCAGTGCCATCACCTT +
Preference number: 6 (lower is better)
Translates to: GVRAWCQATQLL*VSSHQTQCHHL
Trigger: AAGGTGATGGCACTGAGTTTGGTGGGAGCTGACCCAGAGCAGCTGCGTCGCTTGGCACCAGGCACGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CTATGCCCCGAGGCCCTCGTTCACCCATATCCCCTTTaGCACCTCGTGGCCCGGGAGGTCCCTCAATCACAG +
Preference number: 6 (lower is better)
Translates to: LCPEALVHPYPL*HLVAREVPQSQ
Trigger: CTGTGATTGAGGGACCTCCCGGGCCACGAGGTGCCAAAGGGGATATGGGTGAACGAGGGCCTCGGGGCATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TTCGGGTCCCTTGGGACCAACACCACCAGGTGGCCCTaGGGGACCACTAGAGCCATCGTTTCCTCTGGGACC +
Preference number: 6 (lower is better)
Translates to: FGSLGTNTTRWP*GTTRAIVSSGT
Trigger: GGTCCCAGAGGAAACGATGGCTCTAGTGGTCCCCCAGGGCCACCTGGTGGTGTTGGTCCCAAGGGACCCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp CTTTCCAGGAAACCCTGGCCCTCCACCGCCAGTGATTaGCCCAGGCTCACCCGGCTCCCCCTTTGGACCTTG +
Preference number: 6 (lower is better)
Translates to: LSRKPWPSTASD*PRLTRLPLWTL
Trigger: CAAGGTCCAAAGGGGGAGCCGGGTGAGCCTGGGCAAATCACTGGCGGTGGAGGGCCAGGGTTTCCTGGAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp TTAGGTCCAGGGTCACCATCACTGCCTGGCTCCCCCTTGGCACCCTaGAGTCCAGGAGGTCCTTGCTCTCTAGCCAGTCCAGGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: LGPGSPSLPGSPLAP*SPGGPCSLASPGPG
Trigger: GCCAGGCCCTGGACTGGCTAGAGAGCAAGGACCTCCTGGACTCAAGGGTGCCAAGGGGGAGCCAGGCAGTGATGGTGACCCTGGACCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp CGCAGCCTCAAGGAGTGCTCCCCGCTCTGCACAACTTaGAGAGTCTCCAGAAGTGCTGGGGTCGCAGGCGGT +
Preference number: 6 (lower is better)
Translates to: RSLKECSPLCTT*RVSRSAGVAGG
Trigger: ACCGCCTGCGACCCCAGCACTTCTGGAGACTCTTCAAGTTGTGCAGAGCGGGGAGCACTCCTTGAGGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp TCTGTGGGGCCCTCGGCACTTCCTGGCCAGTTCCTCTaGGCGGCCGCCAGGACAAGATATAACTGGATGCCC +
Preference number: 6 (lower is better)
Translates to: SVGPSALPGQFL*AAARTRYNWMP
Trigger: GGGCATCCAGTTATATCTTGTCCTGGCGGCCGCTCAGAGGAACTGGCCAGGAAGTGCCGAGGGCCCCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp AGAAACACTGACCCCTGTCCAGGGCTCAGGTCCTGCTaGTGGGTTGGCCCACCACTGAGGTCCCGCCATGTT +
Preference number: 6 (lower is better)
Translates to: RNTDPCPGLRSC*WVGPPLRSRHV
Trigger: AACATGGCGGGACCTCAGTGGTGGGCCAACCCAGCAGCAGGACCTGAGCCCTGGACAGGGGTCAGTGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp TCTAGAAACACTGACCCCTGTCCAGGGCTCAGGTCCTaGTGCTGGGTTGGCCCACCACTGAGGTCCCGCCAT +
Preference number: 6 (lower is better)
Translates to: SRNTDPCPGLRS*CWVGPPLRSRH
Trigger: ATGGCGGGACCTCAGTGGTGGGCCAACCCAGCAGCAGGACCTGAGCCCTGGACAGGGGTCAGTGTTTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GGCTCCCCCTTGGCACCCTTGAGTCCAGGAGGTCCTTaGTCTCTAGCCAGTCCAGGGCCTGGCTCTTCAATG +
Preference number: 6 (lower is better)
Translates to: GSPLAPLSPGGP*SLASPGPGSSM
Trigger: CATTGAAGAGCCAGGCCCTGGACTGGCTAGAGAGCAAGGACCTCCTGGACTCAAGGGTGCCAAGGGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CTCCGCAGCCACCATAGACAAAGGGATGACAGGCTGTaGCACCAGGCACAGCTCGATGGTACCAGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: LRSHHRQRDDRL*HQAQLDGTSAG
Trigger: CCCTGCGCTGGTACCATCGAGCTGTGCCTGGTGGCACAGCCTGTCATCCCTTTGTCTATGGTGGCTGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp AACACTGACCCCTGTCCAGGGCTCAGGTCCTGCTGCTaGGTTGGCCCACCACTGAGGTCCCGCCATGTTACA +
Preference number: 6 (lower is better)
Translates to: NTDPCPGLRSCC*VGPPLRSRHVT
Trigger: TGTAACATGGCGGGACCTCAGTGGTGGGCCAACCCAGCAGCAGGACCTGAGCCCTGGACAGGGGTCAGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GACAGTGGAGTCTGGGGTCAGCGTCCGGCTGGACTCTaGACCACTGCCTGTCCTCCAGCTGATCCGAAATCC +
Preference number: 6 (lower is better)
Translates to: DSGVWGQRPAGL*TTACPPADPKS
Trigger: GGATTTCGGATCAGCTGGAGGACAGGCAGTGGTCCAGAGTCCAGCCGGACGCTGACCCCAGACTCCACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CAGTCCCGTTACTCCAGGCTCCCCCTTCTGGCCCTTTaGACAGTGCACAGCACAAGGCCCTGTTTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: QSRYSRLPLLAL*TVHSTRPCLRL
Trigger: GAGCCGCAAACAGGGCCTTGTGCTGTGCACTGTCCAAAGGGCCAGAAGGGGGAGCCTGGAGTAACGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp AGTCTCTCCACGGTCACCCTTAGGACCCGTAATTCCTaGGACACCAGGGAAACCCTGGCCGGGAGGACCGAC +
Preference number: 6 (lower is better)
Translates to: SLSTVTLRTRNS*DTRETLAGRTD
Trigger: GTCGGTCCTCCCGGCCAGGGTTTCCCTGGTGTCCCAGGAATTACGGGTCCTAAGGGTGACCGTGGAGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp AAGCCCTTCGGGTCCCTTGGGACCAACACCACCAGGTaGCCCTGGGGGACCACTAGAGCCATCGTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: KPFGSLGTNTTR*PWGTTRAIVSS
Trigger: AGAGGAAACGATGGCTCTAGTGGTCCCCCAGGGCCACCTGGTGGTGTTGGTCCCAAGGGACCCGAAGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp GGGTCACCATCACTGCCTGGCTCCCCCTTGGCACCCTaGAGTCCAGGAGGTCCTTGCTCTCTAGCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: GSPSLPGSPLAP*SPGGPCSLASP
Trigger: TGGACTGGCTAGAGAGCAAGGACCTCCTGGACTCAAGGGTGCCAAGGGGGAGCCAGGCAGTGATGGTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp GGTCCCTCAATCACAGCTGAGTCACCCTTGTCACCCTaGAGCCCTGCAGCGCCAGCAGCGCCCTTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: GPSITAESPLSP*SPAAPAAPFSP
Trigger: AGGAGAGAAGGGCGCTGCTGGCGCTGCAGGGCTCAAGGGTGACAAGGGTGACTCAGCTGTGATTGAGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp TCTATGCCCCGAGGCCCTCGTTCACCCATATCCCCTTaGGCACCTCGTGGCCCGGGAGGTCCCTCAATCACA +
Preference number: 6 (lower is better)
Translates to: SMPRGPRSPISP*APRGPGGPSIT
Trigger: TGTGATTGAGGGACCTCCCGGGCCACGAGGTGCCAAAGGGGATATGGGTGAACGAGGGCCTCGGGGCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp CTCCCCCTTCTGGCCCTTTGGACAGTGCACAGCACAAGGCCCTGTTaGCGGCTCTATGGTCACAGCTGCCTGACACAGGGCTACAGCCAG +
Preference number: 6 (lower is better)
Translates to: LPLLALWTVHSTRPC*RLYGHSCLTQGYSQ
Trigger: CTGGCTGTAGCCCTGTGTCAGGCAGCTGTGACCATAGAGCCGCAAACAGGGCCTTGTGCTGTGCACTGTCCAAAGGGCCAGAAGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp ATCACTGCCTGGCTCCCCCTTGGCACCCTTGAGTCCAGGAGGTCCTaGCTCTCTAGCCAGTCCAGGGCCTGGCTCTTCAATGGCCACCTT +
Preference number: 6 (lower is better)
Translates to: ITAWLPLGTLESRRS*LSSQSRAWLFNGHL
Trigger: AAGGTGGCCATTGAAGAGCCAGGCCCTGGACTGGCTAGAGAGCAAGGACCTCCTGGACTCAAGGGTGCCAAGGGGGAGCCAGGCAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp GAGCGGCCCCCGTGCGAGTGTTACCACCTTTATAGCTaGGCTCACGGATGGCTCGGATGGTGTCACTCCCAG +
Preference number: 6 (lower is better)
Translates to: ERPPCECYHLYS*AHGWLGWCHSQ
Trigger: CTGGGAGTGACACCATCCGAGCCATCCGTGAGCTCAGCTATAAAGGTGGTAACACTCGCACGGGGGCCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp ACACCACGCTCTCCCGGGAGACCTGGGTTGCCATCATaGCCCCTCTTTCCAGGCTCTCCCACATCGCCTTTG +
Preference number: 6 (lower is better)
Translates to: TPRSPGRPGLPS*PLFPGSPTSPL
Trigger: CAAAGGCGATGTGGGAGAGCCTGGAAAGAGGGGTCATGATGGCAACCCAGGTCTCCCGGGAGAGCGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CCAGGATCTCCAGGAAGAGCCAATCCAGGTGCGCCCTaGTCTCCTTTGCTTCCAGAAGCTCCTCTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: PGSPGRANPGAP*SPLLPEAPLGP
Trigger: TGGGCCCAGAGGAGCTTCTGGAAGCAAAGGAGAGCAGGGCGCACCTGGATTGGCTCTTCCTGGAGATCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CTTCTTGTCCAGGCTCTCCCTTGTCTCTGGATTCAATaGCTGCATCCACCAGCCGTCCAGGGGGACCTGGGG +
Preference number: 6 (lower is better)
Translates to: LLVQALPCLWIQ*LHPPAVQGDLG
Trigger: CCCCAGGTCCCCCTGGACGGCTGGTGGATGCAGGCATTGAATCCAGAGACAAGGGAGAGCCTGGACAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CAGCAGCATAAAGGCGTGTGCAGGTCACTCTATCTCTaGGCTGGGCCCACACTTCCGGCGCTCCCATCAGGA +
Preference number: 6 (lower is better)
Translates to: QQHKGVCRSLYL*AGPTLPALPSG
Trigger: TCCTGATGGGAGCGCCGGAAGTGTGGGCCCAGCCCAGAGATAGAGTGACCTGCACACGCCTTTATGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TGTTCTGGAGGCTCAATTCTAGCCCTTCCTTGGCAGTaGTCCGAGCTGTCCCACTCACGGCCTCCCCGATGC +
Preference number: 6 (lower is better)
Translates to: CSGGSILALPWQ*SELSHSRPPRC
Trigger: GCATCGGGGAGGCCGTGAGTGGGACAGCTCGGACCACTGCCAAGGAAGGGCTAGAATTGAGCCTCCAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TGGCTCCCAGGAAGCAATAGAGTCCGCTCGACCCCCTaGGTGGTGCGTACAGTGAAACGGTACTCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: WLPGSNRVRSTP*VVRTVKRYSVA
Trigger: GGCCACTGAGTACCGTTTCACTGTACGCACCACCCAGGGGGTCGAGCGGACTCTATTGCTTCCTGGGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp AGCCTGAGTCAAGTGGACTCTCCTCACTGGGCCCAGTaGATCAGTTCTAGCCACGATGACCACAGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SLSQVDSPHWAQ*ISSSHDDHRGP
Trigger: GGGCCCCCTGTGGTCATCGTGGCTAGAACTGATCCACTGGGCCCAGTGAGGAGAGTCCACTTGACTCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CTCGGGGACCTTCTTGTCCAGGCTCTCCCTTGTCTCTaGATTCAATGCCTGCATCCACCAGCCGTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: LGDLLVQALPCL*IQCLHPPAVQG
Trigger: CCCCTGGACGGCTGGTGGATGCAGGCATTGAATCCAGAGACAAGGGAGAGCCTGGACAAGAAGGTCCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp TGGCTGCTGTCCATTGTACTCGCAAGGATTGGCTACTaGGCTCAGAGAGCACCAGGTCCCGGGGCCCAGACG +
Preference number: 6 (lower is better)
Translates to: WLLSIVLARIGY*AQRAPGPGAQT
Trigger: CGTCTGGGCCCCGGGACCTGGTGCTCTCTGAGCCAAGTAGCCAATCCTTGCGAGTACAATGGACAGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp CTGGCCCTTTGGACAGTGCACAGCACAAGGCCCTGTTaGCGGCTCTATGGTCACAGCTGCCTGACACAGGGC +
Preference number: 6 (lower is better)
Translates to: LALWTVHSTRPC*RLYGHSCLTQG
Trigger: GCCCTGTGTCAGGCAGCTGTGACCATAGAGCCGCAAACAGGGCCTTGTGCTGTGCACTGTCCAAAGGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp CGTAGGCCACGTTCTCCAGGAAGGCCCTGTTCCCCTTaGGATCCAGTCTCTCCACGGTCACCCTTAGGACCC +
Preference number: 6 (lower is better)
Translates to: RRPRSPGRPCSP*DPVSPRSPLGP
Trigger: GGGTCCTAAGGGTGACCGTGGAGAGACTGGATCCAAAGGGGAACAGGGCCTTCCTGGAGAACGTGGCCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp AGGCTGTGCGATGTGATGTTCTGGAGGCTCAATTCTAGCCCTTCCTaGGCAGTGGTCCGAGCTGTCCCACTCACGGCCTCCCCGATGCTG +
Preference number: 6 (lower is better)
Translates to: RLCDVMFWRLNSSPS*AVVRAVPLTASPML
Trigger: CAGCATCGGGGAGGCCGTGAGTGGGACAGCTCGGACCACTGCCAAGGAAGGGCTAGAATTGAGCCTCCAGAACATCACATCGCACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp TGGCCACCTCACGGCCCTCCAGCAGAGTATACAGCGTaGGACGGTACTCAGTGCCTGGCTGCAAACCATCCA +
Preference number: 6 (lower is better)
Translates to: WPPHGPPAEYTA*DGTQCLAANHP
Trigger: TGGATGGTTTGCAGCCAGGCACTGAGTACCGTCTCACGCTGTATACTCTGCTGGAGGGCCGTGAGGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp ACCAGCTGTATCCGCAGCATAACCGGGGAGGGGTCGTaGTCCAGACGCAATAAACTGGCCCTGGCAGGCACA +
Preference number: 6 (lower is better)
Translates to: TSCIRSITGEGS*SRRNKLALAGT
Trigger: TGTGCCTGCCAGGGCCAGTTTATTGCGTCTGGATCACGACCCCTCCCCGGTTATGCTGCGGATACAGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CAAGATGATGGGATGCAGGGTTTGCTCAACAGAAGATaGGGTGCGGGCAGTCAGAGAAGCGGCAGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: QDDGMQGLLNRR*GAGSQRSGRPH
Trigger: GTGGGGCCTGCCGCTTCTCTGACTGCCCGCACCGCATCTTCTGTTGAGCAAACCCTGCATCCCATCATCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp ACGCAGCTGCTCTGGGTCAGCTCCCACCAAACTCAGTaGCATCACCTTAAGCCCAGAAGTCTGGGCCTCACG +
Preference number: 6 (lower is better)
Translates to: TQLLWVSSHQTQ*HHLKPRSLGLT
Trigger: CGTGAGGCCCAGACTTCTGGGCTTAAGGTGATGGCACTGAGTTTGGTGGGAGCTGACCCAGAGCAGCTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GTTACTCCAGGCTCCCCCTTCTGGCCCTTTGGACAGTaGACAGCACAAGGCCCTGTTTGCGGCTCTATGGTC +
Preference number: 6 (lower is better)
Translates to: VTPGSPFWPFGQ*TAQGPVCGSMV
Trigger: GACCATAGAGCCGCAAACAGGGCCTTGTGCTGTGCACTGTCCAAAGGGCCAGAAGGGGGAGCCTGGAGTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp ACCACAGAGGCGGGGGCTCCATCCACACCAGCTACGTaGGTTCTCACACGCACTATATACTCTGTGTCCGGC +
Preference number: 6 (lower is better)
Translates to: TTEAGAPSTPAT*VLTRTIYSVSG
Trigger: GCCGGACACAGAGTATATAGTGCGTGTGAGAACCCACGTAGCTGGTGTGGATGGAGCCCCCGCCTCTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp AGCCTGGGCCATTATCCACAGCAAAGAAGTTCTGGATaGGGTCCGTGCCTGGTGCCAAGCGACGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SLGHYPQQRSSG*GPCLVPSDAAA
Trigger: AGCAGCTGCGTCGCTTGGCACCAGGCACGGACCCCATCCAGAACTTCTTTGCTGTGGATAATGGCCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TCCAAGCCTGGGCCATTATCCACAGCAAAGAAGTTCTaGATGGGGTCCGTGCCTGGTGCCAAGCGACGCAGC +
Preference number: 6 (lower is better)
Translates to: SKPGPLSTAKKF*MGSVPGAKRRS
Trigger: GCTGCGTCGCTTGGCACCAGGCACGGACCCCATCCAGAACTTCTTTGCTGTGGATAATGGCCCAGGCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp GGAAAGGAGGATGGATGTCGGGCTCAAGATGATGGGATGCAGGGTTaGCTCAACAGAAGATGCGGTGCGGGCAGTCAGAGAAGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: GKEDGCRAQDDGMQG*LNRRCGAGSQRSGR
Trigger: CCTGCCGCTTCTCTGACTGCCCGCACCGCATCTTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAGCCCGACATCCATCCTCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp GGTTCTCCTCGTAGGCCACGTTCTCCAGGAAGGCCCTGTTCCCCTTaGGATCCAGTCTCTCCACGGTCACCCTTAGGACCCGTAATTCCT +
Preference number: 6 (lower is better)
Translates to: GSPRRPRSPGRPCSP*DPVSPRSPLGPVIP
Trigger: AGGAATTACGGGTCCTAAGGGTGACCGTGGAGAGACTGGATCCAAAGGGGAACAGGGCCTTCCTGGAGAACGTGGCCTACGAGGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp AGACGGTACTCAGTGCCTGGCTGCAAACCATCCAGCTaGTGGCGGGTCACATCAGGGGGCAGTTCCACTTTC +
Preference number: 6 (lower is better)
Translates to: RRYSVPGCKPSS*WRVTSGGSSTF
Trigger: GAAAGTGGAACTGCCCCCTGATGTGACCCGCCATCAGCTGGATGGTTTGCAGCCAGGCACTGAGTACCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp CAAGGCCCTGTTTGCGGCTCTATGGTCACAGCTGCCTaGCACAGGGCTACAGCCAGATCACTGACTGCTCTG +
Preference number: 6 (lower is better)
Translates to: QGPVCGSMVTAA*HRATARSLTAL
Trigger: CAGAGCAGTCAGTGATCTGGCTGTAGCCCTGTGTCAGGCAGCTGTGACCATAGAGCCGCAAACAGGGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CCAGCCCCTCCAGGAATCCTCGCACTTCTCGAAAGTTaGTGCGGCCAATGGACGACGAGCCATCGAGTAAGA +
Preference number: 6 (lower is better)
Translates to: PAPPGILALLES*CGQWTTSHRVR
Trigger: TCTTACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACTTTCGAGAAGTGCGAGGATTCCTGGAGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CAAGTGGGGCTTCTGGATCTCTGTGGATCGTTAGGATaGTGGCATCACCCTCCTGAGCACCCACTCGAGCAG +
Preference number: 6 (lower is better)
Translates to: QVGLLDLCGSLG*WHHPPEHPLEQ
Trigger: CTGCTCGAGTGGGTGCTCAGGAGGGTGATGCCAGCATCCTAACGATCCACAGAGATCCAGAAGCCCCACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp AGCACAAGGCCCTGTTTGCGGCTCTATGGTCACAGCTaGCTGACACAGGGCTACAGCCAGATCACTGACTGC +
Preference number: 6 (lower is better)
Translates to: STRPCLRLYGHS*LTQGYSQITDC
Trigger: GCAGTCAGTGATCTGGCTGTAGCCCTGTGTCAGGCAGCTGTGACCATAGAGCCGCAAACAGGGCCTTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp CTCCAGGGTCTCCGTTTTTCCCATTCAGGCCTGGTTTaGCATCATCGCCTGCCTTTCCCGGAACTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: LQGLRFSHSGLV*HHRLPFPELQE
Trigger: CTCCTGGAGTTCCGGGAAAGGCAGGCGATGATGGCAAACCAGGCCTGAATGGGAAAAACGGAGACCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp TCCCACTTTCTCCCCGAGGTCCTTTGTCACCATCTATaGCCCGAGGCCCTCGTTCACCCATATCCCCTTTGG +
Preference number: 6 (lower is better)
Translates to: SHFLPEVLCHHL*PEALVHPYPLW
Trigger: CCAAAGGGGATATGGGTGAACGAGGGCCTCGGGGCATAGATGGTGACAAAGGACCTCGGGGAGAAAGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TCACGCCTGGCACTTGCTGACGGCGACCAGGAGCATTaGATGCTAAGAGGTATCTGTGAGCTGTGGTCACGG +
Preference number: 6 (lower is better)
Translates to: SRLALADGDQEH*MLRGICELWSR
Trigger: CCGTGACCACAGCTCACAGATACCTCTTAGCATCCAATGCTCCTGGTCGCCGTCAGCAAGTGCCAGGCGTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CCTCTTTCCAGGCTCTCCCACATCGCCTTTGATGCCTaGTACACCCCTGTCTCCTTTAGGTCCAGGGTCACC +
Preference number: 6 (lower is better)
Translates to: PLSRLSHIAFDA*YTPVSFRSRVT
Trigger: GGTGACCCTGGACCTAAAGGAGACAGGGGTGTACCAGGCATCAAAGGCGATGTGGGAGAGCCTGGAAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp ACCAGCCCCTCCAGGAATCCTCGCACTTCTCGAAAGTaGCTGCGGCCAATGGACGACGAGCCATCGAGTAAG +
Preference number: 6 (lower is better)
Translates to: TSPSRNPRTSRK*LRPMDDEPSSK
Trigger: CTTACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACTTTCGAGAAGTGCGAGGATTCCTGGAGGGGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp GATGTGATGTTCTGGAGGCTCAATTCTAGCCCTTCCTaGGCAGTGGTCCGAGCTGTCCCACTCACGGCCTCC +
Preference number: 6 (lower is better)
Translates to: DVMFWRLNSSPS*AVVRAVPLTAS
Trigger: GGAGGCCGTGAGTGGGACAGCTCGGACCACTGCCAAGGAAGGGCTAGAATTGAGCCTCCAGAACATCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp GAGCTGTGGTCACGGCTGTGCCGAGGTTGTTACCACTaGGGTCCACGTAGGGGATGTCACGGATCTTTCGCA +
Preference number: 6 (lower is better)
Translates to: ELWSRLCRGCYH*GPRRGCHGSFA
Trigger: TGCGAAAGATCCGTGACATCCCCTACGTGGACCCAAGTGGTAACAACCTCGGCACAGCCGTGACCACAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp AAAGGCAGCACCAGCCCCTCCAGGAATCCTCGCACTTCTCGAAAGTaGCTGCGGCCAATGGACGACGAGCCATCGAGTAAGAACACGATG +
Preference number: 6 (lower is better)
Translates to: KGSTSPSRNPRTSRK*LRPMDDEPSSKNTM
Trigger: CATCGTGTTCTTACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACTTTCGAGAAGTGCGAGGATTCCTGGAGGGGCTGGTGCTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp GACCACAGGGGGCCCCTCTTCTCTCCCTCTAAGTGCTaGGACAGCGACTTGATAAGAGGTGCTAGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: DHRGPLFSPSKC*DSDLIRGARLQ
Trigger: TTGCAGCCTAGCACCTCTTATCAAGTCGCTGTCTCAGCACTTAGAGGGAGAGAAGAGGGGCCCCCTGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp GGTCTCCAACAAGCGCCGTCACTCTCACGGAGTAGCTaGCTCCTCCTTCGAGATCCCGTATCTCTGCAGACT +
Preference number: 6 (lower is better)
Translates to: GLQQAPSLSRSS*LLLRDPVSLQT
Trigger: AGTCTGCAGAGATACGGGATCTCGAAGGAGGAGTCAGCTACTCCGTGAGAGTGACGGCGCTTGTTGGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp GAGGTATCCACCACGCGTAGTTCAGTGCTCGGGATGTaGGAGGGCTCAGTGTATGCAGTCACCTTCCTAGGG +
Preference number: 6 (lower is better)
Translates to: EVSTTRSSVLGM*EGSVYAVTFLG
Trigger: CCCTAGGAAGGTGACTGCATACACTGAGCCCTCTCACATCCCGAGCACTGAACTACGCGTGGTGGATACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp CGTCCACTGGGCCATGGGAACACGCTGGTGTTTGTGTaGCAGAGATCTCAGAACCTCGTACACCGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: RPLGHGNTLVFV*QRSQNLVHRSG
Trigger: TCCAGAGCGGTGTACGAGGTTCTGAGATCTCTGTCACACAAACACCAGCGTGTTCCCATGGCCCAGTGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp CGGCGACCAGGAGCATTGGATGCTAAGAGGTATCTGTaGGCTGTGGTCACGGCTGTGCCGAGGTTGTTACCA +
Preference number: 6 (lower is better)
Translates to: RRPGALDAKRYL*AVVTAVPRLLP
Trigger: TGGTAACAACCTCGGCACAGCCGTGACCACAGCTCACAGATACCTCTTAGCATCCAATGCTCCTGGTCGCCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GCCCCTCCAGGAATCCTCGCACTTCTCGAAAGTTGCTaGGGCCAATGGACGACGAGCCATCGAGTAAGAACA +
Preference number: 6 (lower is better)
Translates to: APPGILALLESC*GQWTTSHRVRT
Trigger: TGTTCTTACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACTTTCGAGAAGTGCGAGGATTCCTGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GCCCCAGGGACTGGGTTCCAAGACACTCGCACCCGCTaGCCAGGTAGTTCTATGGCTTGTAAATTCATCACC +
Preference number: 6 (lower is better)
Translates to: APGTGFQDTRTR*PGSSMACKFIT
Trigger: GGTGATGAATTTACAAGCCATAGAACTACCTGGGCAGCGGGTGCGAGTGTCTTGGAACCCAGTCCCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CAGCAGAGTATACAGCGTGAGACGGTACTCAGTGCCTaGCTGCAAACCATCCAGCTGATGGCGGGTCACATC +
Preference number: 6 (lower is better)
Translates to: QQSIQRETVLSA*LQTIQLMAGHI
Trigger: GATGTGACCCGCCATCAGCTGGATGGTTTGCAGCCAGGCACTGAGTACCGTCTCACGCTGTATACTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GTCTCGAGTGGCATGCAAGAGGAACACCACGTCCACTaGGCCATGGGAACACGCTGGTGTTTGTGTGACAGA +
Preference number: 6 (lower is better)
Translates to: VSSGMQEEHHVH*AMGTRWCLCDR
Trigger: TCTGTCACACAAACACCAGCGTGTTCCCATGGCCCAGTGGACGTGGTGTTCCTCTTGCATGCCACTCGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TCCTCACAGCCTCTGCGTTGTGAGCATTGTCTCGAGTaGCATGCAAGAGGAACACCACGTCCACTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: SSQPLRCEHCLE*HARGTPRPLGH
Trigger: ATGGCCCAGTGGACGTGGTGTTCCTCTTGCATGCCACTCGAGACAATGCTCACAACGCAGAGGCTGTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp AGCTGTGGTCACGGCTGTGCCGAGGTTGTTACCACTTaGGTCCACGTAGGGGATGTCACGGATCTTTCGCAA +
Preference number: 6 (lower is better)
Translates to: SCGHGCAEVVTT*VHVGDVTDLSQ
Trigger: TTGCGAAAGATCCGTGACATCCCCTACGTGGACCCAAGTGGTAACAACCTCGGCACAGCCGTGACCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp CACCACGTCCACTGGGCCATGGGAACACGCTGGTGTTaGTGTGACAGAGATCTCAGAACCTCGTACACCGCT +
Preference number: 6 (lower is better)
Translates to: HHVHWAMGTRWC*CDRDLRTSYTA
Trigger: AGCGGTGTACGAGGTTCTGAGATCTCTGTCACACAAACACCAGCGTGTTCCCATGGCCCAGTGGACGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp TCTCCAGGGTCTCCGTTTTTCCCATTCAGGCCTGGTTaGCCATCATCGCCTGCCTTTCCCGGAACTCCAGGA +
Preference number: 6 (lower is better)
Translates to: SPGSPFFPFRPG*PSSPAFPGTPG
Trigger: TCCTGGAGTTCCGGGAAAGGCAGGCGATGATGGCAAACCAGGCCTGAATGGGAAAAACGGAGACCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp CCTAGGGGGACCTTCTCCAGTCTGGCCCAGGACAGTCAGCCATACTaGGTACTTTGTTGCTGGCTCCAGACCAACCAGGTTGTAGCTGTT +
Preference number: 6 (lower is better)
Translates to: PRGTFSSLAQDSQPY*VLCCWLQTNQVVAV
Trigger: AACAGCTACAACCTGGTTGGTCTGGAGCCAGCAACAAAGTACCAAGTATGGCTGACTGTCCTGGGCCAGACTGGAGAAGGTCCCCCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp GGGTCCTGTGAGTCCTCGAACTCCAATCGATCCAGCTaGGCCTTTGTCACCTGGCTCTCCTTTGGAACCCTT +
Preference number: 6 (lower is better)
Translates to: GSCESSNSNRSS*AFVTWLSFGTL
Trigger: AAGGGTTCCAAAGGAGAGCCAGGTGACAAAGGCTCAGCTGGATCGATTGGAGTTCGAGGACTCACAGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GAAAGGAGGATGGATGTCGGGCTCAAGATGATGGGATaGAGGGTTTGCTCAACAGAAGATGCGGTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: ERRMDVGLKMMG*RVCSTEDAVRA
Trigger: TGCCCGCACCGCATCTTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAGCCCGACATCCATCCTCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CAAATTCTGTCTGTGGATCATCACTGTACTGCACTGTaGCAAACCGGACGCCCTGTGCACTGGCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: QILSVDHHCTAL*QTGRPVHWLLL
Trigger: CAGGAGCAGCCAGTGCACAGGGCGTCCGGTTTGCCACAGTGCAGTACAGTGATGATCCACAGACAGAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TCCAAGACACTCGCACCCGCTGCCCAGGTAGTTCTATaGCTTGTAAATTCATCACCGGGCTCACCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SKTLAPAAQVVL*LVNSSPGSPAA
Trigger: AGCAGCTGGTGAGCCCGGTGATGAATTTACAAGCCATAGAACTACCTGGGCAGCGGGTGCGAGTGTCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CCTTCTCCAGTCTGGCCCAGGACAGTCAGCCATACTTaGTACTTTGTTGCTGGCTCCAGACCAACCAGGTTG +
Preference number: 6 (lower is better)
Translates to: PSPVWPRTVSHT*YFVAGSRPTRL
Trigger: CAACCTGGTTGGTCTGGAGCCAGCAACAAAGTACCAAGTATGGCTGACTGTCCTGGGCCAGACTGGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GAGGAACACCACGTCCACTGGGCCATGGGAACACGCTaGTGTTTGTGTGACAGAGATCTCAGAACCTCGTAC +
Preference number: 6 (lower is better)
Translates to: EEHHVHWAMGTR*CLCDRDLRTSY
Trigger: GTACGAGGTTCTGAGATCTCTGTCACACAAACACCAGCGTGTTCCCATGGCCCAGTGGACGTGGTGTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp TCAGGGTCGGCATTCTTGATTCCCACAGCAAACAGCTaGACTCCCTGCCCCTTCAGCTTTTGGGCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: SGSAFLIPTANS*TPCPFSFWAAV
Trigger: CACAGCTGCCCAAAAGCTGAAGGGGCAGGGAGTCAAGCTGTTTGCTGTGGGAATCAAGAATGCCGACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp ATCGATCCAGCTGAGCCTTTGTCACCTGGCTCTCCTTTGGAACCCTaGTCACCAGGATTCCCACTTTCTCCCCGAGGTCCTTTGTCACCA +
Preference number: 6 (lower is better)
Translates to: IDPAEPLSPGSPLEP*SPGFPLSPRGPLSP
Trigger: TGGTGACAAAGGACCTCGGGGAGAAAGTGGGAATCCTGGTGACAAGGGTTCCAAAGGAGAGCCAGGTGACAAAGGCTCAGCTGGATCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp TTGGGTCCTGTGAGTCCTCGAACTCCAATCGATCCAGCTGAGCCTTaGTCACCTGGCTCTCCTTTGGAACCCTTGTCACCAGGATTCCCA +
Preference number: 6 (lower is better)
Translates to: LGPVSPRTPIDPAEP*SPGSPLEPLSPGFP
Trigger: TGGGAATCCTGGTGACAAGGGTTCCAAAGGAGAGCCAGGTGACAAAGGCTCAGCTGGATCGATTGGAGTTCGAGGACTCACAGGACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp TCCAGACCAAATTCTGTCTGTGGATCATCACTGTACTaGACTGTGGCAAACCGGACGCCCTGTGCACTGGCT +
Preference number: 6 (lower is better)
Translates to: SRPNSVCGSSLY*TVANRTPCALA
Trigger: AGCCAGTGCACAGGGCGTCCGGTTTGCCACAGTGCAGTACAGTGATGATCCACAGACAGAATTTGGTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp ATGGATGTCGGGCTCAAGATGATGGGATGCAGGGTTTaGTCAACAGAAGATGCGGTGCGGGCAGTCAGAGAA +
Preference number: 6 (lower is better)
Translates to: MDVGLKMMGCRV*STEDAVRAVRE
Trigger: TTCTCTGACTGCCCGCACCGCATCTTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAGCCCGACATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GGAATCCTCGCACTTCTCGAAAGTTGCTGCGGCCAATaGACGACGAGCCATCGAGTAAGAACACGATGTCAG +
Preference number: 6 (lower is better)
Translates to: GILALLESCCGQ*TTSHRVRTRCQ
Trigger: CTGACATCGTGTTCTTACTCGATGGCTCGTCGTCCATTGGCCGCAGCAACTTTCGAGAAGTGCGAGGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GTGTGTACTGAACCTTGTAGCCAGTCACAGGGCCACTaGCTGCTGTCCATTGTACTCGCAAGGATTGGCTAC +
Preference number: 6 (lower is better)
Translates to: VCTEPCSQSQGH*LLSIVLARIGY
Trigger: GTAGCCAATCCTTGCGAGTACAATGGACAGCAGCCAGTGGCCCTGTGACTGGCTACAAGGTTCAGTACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp TCGCAAGATGATGCCAAGATCATGGGAACTATTCAGTaGGAACAGTGGGGAGGGCCGGTGGCTGTAAGTCAG +
Preference number: 6 (lower is better)
Translates to: SQDDAKIMGTIQ*EQWGGPVAVSQ
Trigger: CTGACTTACAGCCACCGGCCCTCCCCACTGTTCCCACTGAATAGTTCCCATGATCTTGGCATCATCTTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CAGGAGCATTGGATGCTAAGAGGTATCTGTGAGCTGTaGTCACGGCTGTGCCGAGGTTGTTACCACTTGGGT +
Preference number: 6 (lower is better)
Translates to: QEHWMLRGICEL*SRLCRGCYHLG
Trigger: ACCCAAGTGGTAACAACCTCGGCACAGCCGTGACCACAGCTCACAGATACCTCTTAGCATCCAATGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GGCTACAGCCAGATCACTGACTGCTCTGTCCAAGCCTaGGCCATTATCCACAGCAAAGAAGTTCTGGATGGG +
Preference number: 6 (lower is better)
Translates to: GYSQITDCSVQA*AIIHSKEVLDG
Trigger: CCCATCCAGAACTTCTTTGCTGTGGATAATGGCCCAGGCTTGGACAGAGCAGTCAGTGATCTGGCTGTAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp ACCTTCTCCAGTCTGGCCCAGGACAGTCAGCCATACTaGGTACTTTGTTGCTGGCTCCAGACCAACCAGGTT +
Preference number: 6 (lower is better)
Translates to: TFSSLAQDSQPY*VLCCWLQTNQV
Trigger: AACCTGGTTGGTCTGGAGCCAGCAACAAAGTACCAAGTATGGCTGACTGTCCTGGGCCAGACTGGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp ATCGATCCAGCTGAGCCTTTGTCACCTGGCTCTCCTTaGGAACCCTTGTCACCAGGATTCCCACTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: IDPAEPLSPGSP*EPLSPGFPLSP
Trigger: GGGAGAAAGTGGGAATCCTGGTGACAAGGGTTCCAAAGGAGAGCCAGGTGACAAAGGCTCAGCTGGATCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp GTGAGTCCTCGAACTCCAATCGATCCAGCTGAGCCTTaGTCACCTGGCTCTCCTTTGGAACCCTTGTCACCA +
Preference number: 6 (lower is better)
Translates to: VSPRTPIDPAEP*SPGSPLEPLSP
Trigger: TGGTGACAAGGGTTCCAAAGGAGAGCCAGGTGACAAAGGCTCAGCTGGATCGATTGGAGTTCGAGGACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp CTCTCTCCGTCACGGCCACAGGTTCCCTTTATTCCTTTTTCACCCTaGAGGCCCCTGGGACCCATGAAGCCAATATCTCCTTTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: LSPSRPQVPFIPFSP*RPLGPMKPISPLSP
Trigger: AGGAGACAAAGGAGATATTGGCTTCATGGGTCCCAGGGGCCTCAAGGGTGAAAAAGGAATAAAGGGAACCTGTGGCCGTGACGGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp CAGCTGTGTCCACTAAATCTTGGGATTTCCCATCTGTaGTCAGGATGCAGACCTTGGGGACACCAGGACGTG +
Preference number: 6 (lower is better)
Translates to: QLCPLNLGISHL*SGCRPWGHQDV
Trigger: CACGTCCTGGTGTCCCCAAGGTCTGCATCCTGATCACAGATGGGAAATCCCAAGATTTAGTGGACACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp AGTTCCAGGAAAGGAGGATGGATGTCGGGCTCAAGATaGTGGGATGCAGGGTTTGCTCAACAGAAGATGCGG +
Preference number: 6 (lower is better)
Translates to: SSRKGGWMSGSR*WDAGFAQQKMR
Trigger: CCGCATCTTCTGTTGAGCAAACCCTGCATCCCATCATCTTGAGCCCGACATCCATCCTCCTTTCCTGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp GCCCAGGACAGTCAGCCATACTTGGTACTTTGTTGCTaGCTCCAGACCAACCAGGTTGTAGCTGTTAGACTC +
Preference number: 6 (lower is better)
Translates to: AQDSQPYLVLCC*LQTNQVVAVRL
Trigger: GAGTCTAACAGCTACAACCTGGTTGGTCTGGAGCCAGCAACAAAGTACCAAGTATGGCTGACTGTCCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp ATGTCACGGATCTTTCGCAAGATGATGCCAAGATCATaGGAACTATTCAGTGGGAACAGTGGGGAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: MSRIFRKMMPRS*ELFSGNSGEGR
Trigger: CCGGCCCTCCCCACTGTTCCCACTGAATAGTTCCCATGATCTTGGCATCATCTTGCGAAAGATCCGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp TCACGGCCACAGGTTCCCTTTATTCCTTTTTCACCCTaGAGGCCCCTGGGACCCATGAAGCCAATATCTCCT +
Preference number: 6 (lower is better)
Translates to: SRPQVPFIPFSP*RPLGPMKPISP
Trigger: AGGAGATATTGGCTTCATGGGTCCCAGGGGCCTCAAGGGTGAAAAAGGAATAAAGGGAACCTGTGGCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 90 bp CTCCTGGAAATGAGAGGCAACAGGGTCCTCAAGATGCTGAAGTCATaGACGAAGAAGAAGAAATCGCTGGTTGGCTGTGAGGCCACACGC +
Preference number: 6 (lower is better)
Translates to: LLEMRGNRVLKMLKS*TKKKKSLVGCEATR
Trigger: GCGTGTGGCCTCACAGCCAACCAGCGATTTCTTCTTCTTCGTCAATGACTTCAGCATCTTGAGGACCCTGTTGCCTCTCATTTCCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS GCA 72 bp GGAGTAGCTGACTCCTCCTTCGAGATCCCGTATCTCTaGAGACTCTTTGTTTCCTGGGAGTATCCGGTGTTT +
Preference number: 6 (lower is better)
Translates to: GVADSSFEIPYL*RLFVSWEYPVF
Trigger: AAACACCGGATACTCCCAGGAAACAAAGAGTCTGCAGAGATACGGGATCTCGAAGGAGGAGTCAGCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS TCA 72 bp GGTCCACGTAGGGGATGTCACGGATCTTTCGCAAGATaGTGCCAAGATCATGGGAACTATTCAGTGGGAACA +
Preference number: 6 (lower is better)
Translates to: GPRRGCHGSFAR*CQDHGNYSVGT
Trigger: TGTTCCCACTGAATAGTTCCCATGATCTTGGCATCATCTTGCGAAAGATCCGTGACATCCCCTACGTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CCA 72 bp CCCTTCAGCTTTTGGGCAGCTGTGTCCACTAAATCTTaGGATTTCCCATCTGTGATCAGGATGCAGACCTTG +
Preference number: 6 (lower is better)
Translates to: PFSFWAAVSTKS*DFPSVIRMQTL
Trigger: CAAGGTCTGCATCCTGATCACAGATGGGAAATCCCAAGATTTAGTGGACACAGCTGCCCAAAAGCTGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8
CDS CAA 72 bp ATGAGAGGCAACAGGGTCCTCAAGATGCTGAAGTCATaGACGAAGAAGAAGAAATCGCTGGTTGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: MRGNRVLKMLKS*TKKKKSLVGCE
Trigger: CTCACAGCCAACCAGCGATTTCTTCTTCTTCGTCAATGACTTCAGCATCTTGAGGACCCTGTTGCCTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026740.6
ENSMUST00000112070.8