RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL6A5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091345

Ensembl transcript IDs: ENSMUST00000165165.3, ENSMUST00000190193.8

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTaGGAGATGAAACCCGGTCCTAGTTTTGAAGGTCTGTTCCTTGAT +
Preference number: 1 (lower is better)
Translates to: RGRLLPLLAQWSHSS*EMKPGPSFEGLFLD
Trigger: ATCAAGGAACAGACCTTCAAAACTAGGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR TCA 90 bp TCAACACGAACGCCTACGGTTCTGTCCATCTTCCCACAAGTCACATaGCTTTACTCTTCTTTATGCCTAAACAGTACTCCACTGCCTGCA +
Preference number: 1 (lower is better)
Translates to: STRTPTVLSIFPQVT*LYSSLCLNSTPLPA
Trigger: TGCAGGCAGTGGAGTACTGTTTAGGCATAAAGAAGAGTAAAGTCATGTGACTTGTGGGAAGATGGACAGAACCGTAGGCGTTCGTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR TCA 90 bp AACCCGGTCCTAGTTTTGAAGGTCTGTTCCTTGATGTCTCTATCCTaGAGAGTCTCTCCCTCAGGTTTGGGACTGAGAAGCAAATTTAGT +
Preference number: 1 (lower is better)
Translates to: NPVLVLKVCSLMSLS*RVSPSGLGLRSKFS
Trigger: ACTAAATTTGCTTCTCAGTCCCAAACCTGAGGGAGAGACTCTTCAGGATAGAGACATCAAGGAACAGACCTTCAAAACTAGGACCGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR GCA 90 bp CACATGACTTTACTCTTCTTTATGCCTAAACAGTACTCCACTGCCTaGATACTCCATGTTAAACTGACCGAGTGTATAACAAATTCACTA +
Preference number: 1 (lower is better)
Translates to: HMTLLFFMPKQYSTA*ILHVKLTECITNSL
Trigger: TAGTGAATTTGTTATACACTCGGTCAGTTTAACATGGAGTATGCAGGCAGTGGAGTACTGTTTAGGCATAAAGAAGAGTAAAGTCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR-3UTR GCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCCAGGGGAGTCCCATCTaGCAGCGAGCACTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: VASSCSVVPFLLRDETRSQGSPI*QRALFS
Trigger: AGAGAAGAGTGCTCGCTGGCAGATGGGACTCCCCTG...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR-3UTR TCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCGACCCTTCTAATAAATaGTTGGCATTTTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: VASSCSVVPFLLRDETRSDPSNK*LAFSGW
Trigger: CCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTC...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR-3UTR GCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTTCTGGCTGGAACTACTaGCGCAGGGGAGTCCCATCT +
Preference number: 2 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTSGWNY*RRGVPS
Trigger: AGATGGGACTCCCCTGCGGCAGTAGTTCCAGCCAGA...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR-3UTR TCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCCCTCAGGTTTGGGACTaGGAAGCAAATTTAGTTCTA +
Preference number: 2 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSPQVWD*EANLVL
Trigger: TAGAACTAAATTTGCTTCTCAGTCCCAAACCTGAGG...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR-3UTR GCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATTTTAGTTCTAGTTCCTaGCCCGACCCTTCTAATAAA +
Preference number: 2 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDFSSSS*PDPSNK
Trigger: TTTATTAGAAGGGTCGGGGCAGGAACTAGAACTAAA...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR-3UTR CCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCTTCTAATAAATGATTaGCATTTTCTGGCTGGAACT +
Preference number: 2 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDLLIND*HFLAGT
Trigger: AGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR CAA 90 bp ATTGGGACATTCCAATTACAAACTGTTTTTACTCAAGGGTCTAATTaGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTG +
Preference number: 2 (lower is better)
Translates to: IGTFQLQTVFTQGSN*RCRCDGDHDKHLLL
Trigger: CAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTGTAATTGGAATGTCCCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR GCA 72 bp AAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTaGCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: KASEPSCHGEGC*LFLLSGPIPPE
Trigger: CTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR TCA 72 bp CTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATaGAACCCGGTCCTAGTTTTGAAGGTCTGTTCCTTG +
Preference number: 3 (lower is better)
Translates to: LFLLSGPIPPER*NPVLVLKVCSL
Trigger: CAAGGAACAGACCTTCAAAACTAGGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR-3UTR CAA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGGTCTCTCCCTCAGGTTaGGGACTGAGAAGCAAATTT +
Preference number: 3 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGVSPSG*GLRSKF
Trigger: AAATTTGCTTCTCAGTCCCAAACCTGAGGGAGAGAC...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR TCA 72 bp TTTAGTTCTAGTTCCTGCCCCGACCCTTCTAATAAATaGTTGGCATTTTCTGGCTGGAACTACTGCCGCAGG +
Preference number: 3 (lower is better)
Translates to: FSSSSCPDPSNK*LAFSGWNYCRR
Trigger: CCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTCGGGGCAGGAACTAGAACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR TCA 72 bp CTAGTTTTGAAGGTCTGTTCCTTGATGTCTCTATCCTaGAGAGTCTCTCCCTCAGGTTTGGGACTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: LVLKVCSLMSLS*RVSPSGLGLRS
Trigger: GCTTCTCAGTCCCAAACCTGAGGGAGAGACTCTTCAGGATAGAGACATCAAGGAACAGACCTTCAAAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR TCA 72 bp ACGCCTACGGTTCTGTCCATCTTCCCACAAGTCACATaGCTTTACTCTTCTTTATGCCTAAACAGTACTCCA +
Preference number: 3 (lower is better)
Translates to: TPTVLSIFPQVT*LYSSLCLNSTP
Trigger: TGGAGTACTGTTTAGGCATAAAGAAGAGTAAAGTCATGTGACTTGTGGGAAGATGGACAGAACCGTAGGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR CCA 72 bp GTAGATGTGATGGCGATCATGACAAACATCTTCTTTTaGCAGGCACTCACCAAAGTGATCAAAGCGAGTGAA +
Preference number: 3 (lower is better)
Translates to: VDVMAIMTNIFF*QALTKVIKASE
Trigger: TTCACTCGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR-3UTR CAA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGAAATTCACTACTGCTTaGTCTTGTCCTGTATGTGTG +
Preference number: 3 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWKFTTA*SCPVCV
Trigger: CACACATACAGGACAAGACAAAGCAGTAGTGAATTT...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGTCACACTTTTGCTCCTaGGAGCCGTGGCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLSHFCS*EPWLGP
Trigger: GGGGCCCAGCCACGGCTCTCAGGAGCAAAAGTGTGA...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGGCTCACCTGCGCCTCTaGACCTGCACCACAGCTCAC +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLAHLRL*TCTTAH
Trigger: GTGAGCTGTGGTGCAGGTGCAGAGGCGCAGGTGAGC...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCTGCGTACTCGGGGCCTaGCCCTGGGCTCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFCVLGA*PWALVC
Trigger: GCAGACCAGAGCCCAGGGCCAGGCCCCGAGTACGCA...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGGTTGCTGTCTTTTCCTaGGTCACCGGGATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLVAVFS*VTGIPW
Trigger: CCAGGGGATCCCGGTGACCCAGGAAAAGACAGCAAC...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCCCTGGGCCTTCCTGCTaGCACTGGACTCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VASSCSVVPFLLRDETRSPGPSC*HWTLRS
Trigger: GCTTCTCAGAGTCCAGTGGCAGCAGGAAGGCCCAGG...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGTGGAGCTGGGGTCTCTaGGGAACAAGGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLWSWGL*GTRLFL
Trigger: AAGGAAGAGCCTTGTTCCGCAGAGACCCCAGCTCCA...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCTGCCCTGAGGGACCCTaGGGCCCCCTCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSCPEGP*GPLWPS
Trigger: GGAGGGCCAGAGGGGGCCCCAGGGTCCCTCAGGGCA...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCGTCAGGCGGCTGCCATaGTCTTCTGTGAACAGGACG +
Preference number: 4 (lower is better)
Translates to: VASSCSVVPFLLRDETRSVRRLP*SSVNRT
Trigger: CGTCCTGTTCACAGAAGAGCATGGCAGCCGCCTGAC...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCCTGCGCCTCTGCACCTaGACCACAGCTCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFLRLCT*TTAHPS
Trigger: AGAGGGGTGAGCTGTGGTGCAGGTGCAGAGGCGCAG...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCATCCCCTCTGGGTCCTaGTGGCCCAGGAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFIPSGS*WPRRTL
Trigger: CAGGGTTCTCCTGGGCCAGCAGGACCCAGAGGGGAT...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGCCTTCCTGCTGCCACTaGACTCTGAGAAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLPSCCH*TLRSLL
Trigger: AAGAAGGCTTCTCAGAGTCCAGTGGCAGCAGGAAGG...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCGCATCCCCAGGCTCATaGGCAAGACCCAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VASSCSVVPFLLRDETRSASPGS*ARPSSS
Trigger: AGAAGAACTGGGTCTTGCTCATGAGCCTGGGGATGC...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCCCCTGGGCTCTGGTCTaGCAGGGTTTCAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFPWALV*QGFSPE
Trigger: CTCTGGACTGAAACCCTGGCAGACCAGAGCCCAGGG...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CCGACCCTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGCGCCCTGGGCCTTCCTaGTGCCACTGGACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PTLLINDWHFLAGTTAAGRPGPS*CHWTLR
Trigger: TCTCAGAGTCCAGTGGCAGCAGGAAGGCCCAGGGCG...CCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCGACCCTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGCCTGGCCCTGGGCTCTaGTCTGCCAGGGTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PTLLINDWHFLAGTTAAGPGPGL*SARVSV
Trigger: GACTGAAACCCTGGCAGACCAGAGCCCAGGGCCAGG...CCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGTGTAGGAGCTGTGTGTaGAAATGCTCTGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLCRSCV*KCSAWK
Trigger: CTTCCAGGCAGAGCATTTCCACACACAGCTCCTACA...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGCATCCACAAAGCAATTaGCTTTCCCACAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLHPQSN*LSHSSG
Trigger: GCCAGAGCTGTGGGAAAGCCAATTGCTTTGTGGATG...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGGGTTCCATGAGGTCCTaGAATCCCCGGACATTTACA +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLGSMRS*NPRTFT
Trigger: TGTAAATGTCCGGGGATTCCAGGACCTCATGGAACC...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGCTCCTGAAAATCCTTTaGCTCCCTTTTGACCTCGAG +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLLLKIL*LPFDLE
Trigger: CTCGAGGTCAAAAGGGAGTCAAAGGATTTTCAGGAG...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGGTTGAGAAGCATCTATaGGGAAAGCCACGTCCATGT +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLVEKHL*GKPRPC
Trigger: ACATGGACGTGGCTTTCCTCATAGATGCTTCTCAAC...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGAGGTGTGGCTGGGGCTaGAGGTGTGGTTGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGRCGWG*RCGWGY
Trigger: GTAGCCCCAACCACACCTGCAGCCCCAGCCACACCT...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCAAGGCCAGGCTCACCTaGGCCTCTGCACCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LLINDWHFLAGTTAAGESKARLT*ASAPAP
Trigger: TGGTGCAGGTGCAGAGGCGCAGGTGAGCCTGGCCTT...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCCCCTCTGGGTCCTGCTaGCCCAGGAGAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSPSGSC*PRRTLR
Trigger: CCTCAGGGTTCTCCTGGGCCAGCAGGACCCAGAGGG...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAAAGACCAGCTCTGTTaGATACACAGGGCACTTGTC +
Preference number: 4 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLKDQLC*IHRALV
Trigger: GACAAGTGCCCTGTGTATCCAACAGAGCTGGTCTTT...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCAGATTGAAATGGAACTaGGAGGTGGCCATCGCCTTC +
Preference number: 4 (lower is better)
Translates to: VASSCSVVPFLLRDETRSRLKWN*EVAIAF
Trigger: GAAGGCGATGGCCACCTCTCAGTTCCATTTCAATCT...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCTGGACCTATGCTGCCTaGGTGGTCCAGCACAAACAC +
Preference number: 4 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFWTYAA*VVQHKH
Trigger: GTGTTTGTGCTGGACCACTCAGGCAGCATAGGTCCA...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGAGTCCCCGGGTTCCATaGGGTCCTGGAATCCCCGGA +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKASPRVP*GPGIPG
Trigger: TCCGGGGATTCCAGGACCTCATGGAACCCGGGGACT...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCAGGTATGGTTGGGGCTaGAGGTGTGGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSRYGWG*RCGWGC
Trigger: GCAGCCCCAGCCACACCTGCAGCCCCAACCATACCT...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCCTGATGCTCTGTGGGTaGCCAGCACAGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: LLINDWHFLAGTTAAGESLMLCG*PAQQSG
Trigger: CCCAGATTGCTGTGCTGGTCACCCACAGAGCATCAG...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGACCGTCTGAGAAGATaGGCAGAACCTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWDRLRR*AEPGPW
Trigger: CCAGGGGCCAGGTTCTGCTCATCTTCTCAGACGGTC...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CCGACCCTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGACCCTGGAGACCGTCTaGGAAGATGAGCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: PTLLINDWHFLAGTTAAGTLETV*EDEQNL
Trigger: CAGGTTCTGCTCATCTTCTCAGACGGTCTCCAGGGT...CCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGGGTCCTTGTGTACCTTaGGGTCCTGGGTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGGPCVP*GPGFPA
Trigger: GGCAGGAAACCCAGGACCTCAAGGTACACAAGGACC...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCGAAGCTGTCAATCACTaGGCTCACCAGCGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFEAVNH*AHQRFH
Trigger: GTGAAAGCGCTGGTGAGCTCAGTGATTGACAGCTTC...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCCTCCAACACAAAAGATaGGTCTTTCCCAGCGTTCAG +
Preference number: 4 (lower is better)
Translates to: VASSCSVVPFLLRDETRSLQHKR*VFPSVQ
Trigger: CTGAACGCTGGGAAAGACTCATCTTTTGTGTTGGAG...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGGTGAGCGCTCCAATCTaGACTCGGTCCCTACCAACG +
Preference number: 4 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGVSAPI*TRSLPT
Trigger: CGTTGGTAGGGACCGAGTGCAGATTGGAGCGCTCAC...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCGGCCACAAACCTCATTaGATTGCCAATGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFGHKPH*IANVPG
Trigger: GCCAGGGACATTGGCAATGCAATGAGGTTTGTGGCC...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCCCCTCCGGTGTCCCTaGGCCTCCTCAGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTPLRCP*ASSDAQ
Trigger: CTGAGCATCTGAGGAGGCCCAGGGACACCGGAGGGG...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGGTCACCCTTCTGCCCTaGGTCCCCAGGGAATCCTGT +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKAVTLLP*VPRESC
Trigger: ACAGGATTCCCTGGGGACCCAGGGCAGAAGGGTGAC...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCGACCCTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGTTCCAACAGGGGCTGTaGTCCCTCAGGAACTGGATC +
Preference number: 4 (lower is better)
Translates to: PTLLINDWHFLAGTTAAGFQQGL*SLRNWI
Trigger: GATCCAGTTCCTGAGGGACCACAGCCCCTGTTGGAA...CCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGTTCTCTGAGCCTGTCTaGCTGCCGCTCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKAFSEPV*LPLQQG
Trigger: ACCTTGCTGGAGCGGCAGTCAGACAGGCTCAGAGAA...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGACTCCATGGTGGCCGTaGGGATGGATGCTCTACTGG +
Preference number: 4 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWTPWWP*GWMLYW
Trigger: CCAGTAGAGCATCCATCCTCACGGCCACCATGGAGT...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCACTATGTCTTCTAATTaGGTGTTGTTGGCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: VASSCSVVPFLLRDETRSTMSSN*VLLAPS
Trigger: CGAAGGGGCCAACAACACGCAATTAGAAGACATAGT...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCAGAGTTCGATCCTCTTaGAATCATGCAGAGCACACA +
Preference number: 4 (lower is better)
Translates to: VASSCSVVPFLLRDETRSRVRSS*NHAEHT
Trigger: TGTGTGCTCTGCATGATTGCAAGAGGATCGAACTCT...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTGGCCGTGAGGATGGATaGTCTACTGGCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTGREDG*STGCLA
Trigger: GGCCAGGCAGCCAGTAGAGCATCCATCCTCACGGCC...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCTGTCATAGCAAAGTGTaGAGCGCCGAAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFCHSKV*SAEASP
Trigger: TGGAGAAGCTTCGGCGCTGCACACTTTGCTATGACA...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCGATTCTAAGCGGGGATaGCCCTGGAACAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLINDWHFLAGTTAAGESDSKRG*PWNKGW
Trigger: CCAGCCTTTGTTCCAGGGCCATCCCCGCTTAGAATC...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTGTCACCGGGATCCCCTaGGAAGCCCTTCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTVTGIP*EALLAI
Trigger: GATGGCGAGAAGGGCTTCCCAGGGGATCCCGGTGAC...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTTCCAGGGGGCCCCACTaGTCCTGGGCCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLSRGPH*SWASRN
Trigger: GTTCCTGGAGGCCCAGGACCAGTGGGGCCCCCTGGA...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCCCCTGCCCTTCCTTCTaGAGCTCTCTGAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LLINDWHFLAGTTAAGESPCPSF*SSLREN
Trigger: ATTCTCCCTCAGAGAGCTCCAGAAGGAAGGGCAGGG...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGCATCAGTCAGCACGATaGGGTAACAGGGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKAHQSAR*GNRGLC
Trigger: ACAGAGCCCCCTGTTACCTCATCGTGCTGACTGATG...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTGCCGCTCCAGCAAGGTaGTGCTTTCACCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTAAPAR*CFHPGD
Trigger: GTCTCCAGGGTGAAAGCATCACCTTGCTGGAGCGGC...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CCGACCCTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGTTCCCCCTGAGCTCCTaGAAATCCTTTGACTCCCTT +
Preference number: 4 (lower is better)
Translates to: PTLLINDWHFLAGTTAAGFPLSS*KSFDSL
Trigger: AAGGGAGTCAAAGGATTTTCAGGAGCTCAGGGGGAA...CCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGAGATAGCTGGTGTCTaGGTCATAGGAGACCACGGC +
Preference number: 4 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWEIAGV*VIGDHG
Trigger: GCCGTGGTCTCCTATGACTCAGACACCAGCTATCTC...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGCAGGAATTCCAGGATTaGCAGCGTCACCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWQEFQD*QRHPSA
Trigger: GGCAGAAGGGTGACGCTGGCAATCCTGGAATTCCTG...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCTTAGAGCTGCAGGTATaGTTGGGGCTGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSLELQV*LGLQVW
Trigger: CCACACCTGCAGCCCCAACCATACCTGCAGCTCTAA...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGTGTGCCAGCATTCTCTaGGCCAGGGAAGGTGAGATT +
Preference number: 4 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGCASIL*AREGEI
Trigger: AATCTCACCTTCCCTGGCCCAGAGAATGCTGGCACA...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCCATCCACAGAGCTGGTaGCATTCTCCAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLINDWHFLAGTTAAGESHPQSW*HSPGSS
Trigger: AGAACTTCCTGGAGAATGTCACCAGCTCTGTGGATG...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGAGACTGGTTGGCGCTTaGCCTCAGGGAAGAAATAGT +
Preference number: 4 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGRLVGA*PQGRNS
Trigger: ACTATTTCTTCCCTGAGGTCAAGCGCCAACCAGTCT...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGGCTGCCACTGGACTCTaGGAAGCCTTCTTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKAAATGL*EAFFPH
Trigger: ATGAGGAAAGAAGGCTTCTCAGAGTCCAGTGGCAGC...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCCGCACCATGTCATCTaGTGCTCTGTGGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTPHHVI*CSVGDQ
Trigger: CTGGTCACCCACAGAGCATCAGATGACATGGTGCGG...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCAGAGAGTCAGTCCCTTaGATCCTTTGGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSRESVP*ILWVQV
Trigger: GACCTGGACCCAAAGGATTCAAGGGACTGACTCTCT...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGCTGCCTTTCAAGCCTTaGGAGAGAGTCAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKALPFKP*ERVSPL
Trigger: CAAGGGACTGACTCTCTCTCAAGGCTTGAAAGGCAG...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCCTGGGCCAGGGAAGGTaGGATTATCACACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSLGQGR*DYHTWL
Trigger: AAGCCAAGTGTGATAATCTCACCTTCCCTGGCCCAG...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCGAGAGTTTCTGGATTTaGTGCTGGAATTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFESFWI*CWNSDW
Trigger: CCAGTCTGAATTCCAGCAGCAAATCCAGAAACTCTC...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCGTCCCTACCAACGTCTaGCTTCTTCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: LLINDWHFLAGTTAAGESVPTNV*LLHQVD
Trigger: ATCCACTTGGTGAAGAAGGCAGACGTTGGTAGGGAC...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTCCAGCGTCACCCTTCTaGCCTGGGTCCCCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLPASPF*PGSPGN
Trigger: ATTCCCTGGGGACCCAGGGCAGAAGGGTGACGCTGG...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCAAAGAAAGGCTCTTCTaGACAGGTGTTTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: VASSCSVVPFLLRDETRSKERLF*TGVWKT
Trigger: TGTTTTCCAAACACCTGTGCAGAAGAGCCTTTCTTT...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGCTTCGCCATCTTGTTTaGTGTTCACTGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWLRHLV*CSLELG
Trigger: CCCCAGCTCCAGTGAACAGCAAACAAGATGGCGAAG...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCGTGGTTGGCAGCTGTaGTTAGAGCTGCAGGTATGG +
Preference number: 4 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDRGWQL*LELQVW
Trigger: CCATACCTGCAGCTCTAACCACAGCTGCCAACCACG...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATATCTGGGGGACGCCCTaGGCCTTCCTGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHIWGTP*AFLLPL
Trigger: CAGTGGCAGCAGGAAGGCCCAGGGCGTCCCCCAGAT...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCCTAATTGCGTGTTGTTaGCCCCTTCGATGCCCATTG +
Preference number: 4 (lower is better)
Translates to: LLINDWHFLAGTTAAGESLIACC*PLRCPL
Trigger: CAATGGGCATCGAAGGGGCCAACAACACGCAATTAG...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTTTCCAATATCCCCTCTaGGTCCTGCTGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTFQYPL*VLLAQE
Trigger: CTCCTGGGCCAGCAGGACCCAGAGGGGATATTGGAA...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGCTCATAATCTCCAACTaGGGGGACTGGAATCACCTG +
Preference number: 4 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGLIISN*GDWNHL
Trigger: CAGGTGATTCCAGTCCCCCCAGTTGGAGATTATGAG...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCGCACTCTTCAGTGTTTaGCAGATAGCCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSALFSV*QIAWGR
Trigger: TCTCCCCCAGGCTATCTGCCAAACACTGAAGAGTGC...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCAAATTTAGTTCTAGTTCCTGCCCCGACCCTTCTAATAAATGATTGGCATTTTTCTGAGCCCTGTCGCTaGAGCTCATCAGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ANLVLVPAPTLLINDWHFSEPCR*SSSAQA
Trigger: GGCTTGGGCTGATGAGCTTCAGCGACAGGGCTCAGA...AAAATGCCAATCATTTATTAGAAGGGTCGGGGCAGGAACTAGAACTAAATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCTGCCATGCTCTTCTGTaGACAGGACGTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSCHALL*TGRWNA
Trigger: AGCATTCCAACGTCCTGTTCACAGAAGAGCATGGCA...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCGAGGTCACTGACAATTaGAGTGATGGTGTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LLINDWHFLAGTTAAGESEVTDN*SDGVPC
Trigger: ACAAGGGACACCATCACTTCAATTGTCAGTGACCTC...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATGGCGTGGCAACCCCTTaGTCTGGGCCACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHGVATP*SGPHCG
Trigger: TCCACAGTGTGGCCCAGAGCAAGGGGTTGCCACGCC...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CCGACCCTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGTATAAACATCCCCTATaGCCAAAGCCAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: PTLLINDWHFLAGTTAAGYKHPL*PKPGHR
Trigger: TCTGTGTCCTGGCTTTGGGCATAGGGGATGTTTATA...CCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GCAAATTTAGTTCTAGTTCCTGCCCCGACCCTTCTAATAAATGATTGGCATTTTGACCACGGCAACCCGTaGTCCCACGGGACAGTTGTT +
Preference number: 4 (lower is better)
Translates to: ANLVLVPAPTLLINDWHFDHGNP*SHGTVV
Trigger: AACAACTGTCCCGTGGGAGCACGGGTTGCCGTGGTC...AAAATGCCAATCATTTATTAGAAGGGTCGGGGCAGGAACTAGAACTAAATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATGTCCCTTCCCTGTACTaGGTCACATCCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDVPSLY*VTSLMI
Trigger: GATCATCAAGGATGTGACTCAGTACAGGGAAGGGAC...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATATAACAACCAGAGTCTaGGGGACACCAGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDITTRV*GTPAFL
Trigger: AAGGAACGCTGGTGTCCCTCAGACTCTGGTTGTTAT...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGTTTCTGAATTGCCTGTaGTGGGCAGAAGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKAFLNCL*WAEAVP
Trigger: AGGAACAGCTTCTGCCCATCACAGGCAATTCAGAAA...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTCAAGTCCTGCTTCTCTaGGCCTGTCTGACTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLQVLLL*ACLTAA
Trigger: AGCGGCAGTCAGACAGGCTCAGAGAAGCAGGACTTG...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATGGGACTGGAATCACCTaGAATGTCCCAGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDGTGIT*NVPVSS
Trigger: TGATGACACTGGGACATTTCAGGTGATTCCAGTCCC...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGCGTCCTCCTACTCGTTaGGAAGCATCTATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWRPPTR*EASMRK
Trigger: TTTCCTCATAGATGCTTCTCAACGAGTAGGAGGACG...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGATCAGCAGTGCTTTCTaGATGGTTGCCATGACTGTT +
Preference number: 4 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGISSAF*MVAMTV
Trigger: AACAGTCATGGCAACCATTCAGAAAGCACTGCTGAT...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATAGCTGTGTGTGGAAATaGTCTGCCTGGAAGGGTATG +
Preference number: 4 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDSCVWK*SAWKGM
Trigger: CATACCCTTCCAGGCAGAGCATTTCCACACACAGCT...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCTCCTTCCCAGCAATCTaGCGCAGCTGTGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSSFPAI*RSCVLF
Trigger: AAACAAAACACAGCTGCGGCAGATTGCTGGGAAGGA...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGAACCTGGCCCCTGGATaGAGATCTTTCCTCAAACAT +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKANLAPG*RSFLKH
Trigger: ATGTTTGAGGAAAGATCTGCATCCAGGGGCCAGGTT...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TGTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATCTGAGCCTGTCTGACTaGCGCTCCAGCAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: CFDTLFENSSVSRFTCWHLSLSD*RSSKVM
Trigger: CATCACCTTGCTGGAGCGGCAGTCAGACAGGCTCAG...ATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCTCCCCTGTGTCCTCTaGTACCTTTTGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTLPCVL*YLLDLK
Trigger: CTTCAGGTCCAAAAGGTAGCAGAGGACACAGGGGAG...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCTGGGTAACCCTGATTaGCAGGGTCACCTTTTTGTC +
Preference number: 4 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDLGNPD*QGHLFV
Trigger: GACAAAAAGGTGACCCTGGCAATCAGGGTTACCCAG...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGTCTCCAGTTCATCTTaGTTGGCATTTCCTACACCC +
Preference number: 4 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWVSSSS*LAFPTP
Trigger: GGGTGTAGGAAATGCCAACCAAGATGAACTGGAGAC...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCGATCTGGAACTTGGCTaGGAACTCTTGGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSDLELG*ELLVTV
Trigger: AACAGTGACCAAGAGTTCCCAGCCAAGTTCCAGATC...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGGCCTTCCGGGGCACTTaGTATTTTATCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKAAFRGT*YFIWER
Trigger: TCTTTCCCAGATAAAATACCAAGTGCCCCGGAAGGC...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCGGGTTTGAAGTGATGTaGAAGCTGTCAATCACTGAG +
Preference number: 4 (lower is better)
Translates to: LLINDWHFLAGTTAAGESGFEVM*KLSITE
Trigger: CTCAGTGATTGACAGCTTCCACATCACTTCAAACCC...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTGGAAGAGACCTTCCATaGCCCACTGTAGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLGRDLP*PTVGQG
Trigger: GCCTTGCCCTACAGTGGGCCATGGAAGGTCTCTTCC...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCGAATTCCAGGTAGACTaGGCACTCTTCAGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSEFQVD*ALFSVW
Trigger: CCAAACACTGAAGAGTGCCCAGTCTACCTGGAATTC...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTTGGGGTTCCTGTTCTTaGAGGTGCCCAGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLWGSCS*RCPAGT
Trigger: AGTTCCAGCTGGGCACCTTCAAGAACAGGAACCCCA...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATAAACATGTCCCAAAGTaGCTGCAAGAACGGTGCATC +
Preference number: 4 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDKHVPK*LQERCI
Trigger: GATGCACCGTTCTTGCAGTCACTTTGGGACATGTTT...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTCTGCCTGGCCATTGCTaGAAAACACAGCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLLPGHC*KTQPLS
Trigger: GGAGAGTGGCTGTGTTTTTCAGCAATGGCCAGGCAG...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGGGGTCCAGATTTCATTaGGGATCTTCTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKAGSRFH*GSSSGS
Trigger: ACTTCCTGAAGAAGATCCGCAATGAAATCTGGACCC...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCTTCATCATGCTTTCTTaGTCACGTGGACCTATGCTG +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSFIMLS*SRGPML
Trigger: CAGCATAGGTCCACGTGAGCAAGAAAGCATGATGAA...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATGGCAGCAAGCCCTTTCTaGGATGTTTCCCAGGTACTG +
Preference number: 4 (lower is better)
Translates to: VLIHCLRIALFPGSHVGMAASPF*DVSQVL
Trigger: CAGTACCTGGGAAACATCGCAGAAAGGGCTTGCTGC...CATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTGCAAGGGAGTCCTTCTaGCAAGAGGTGGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLARESF*QEVGKG
Trigger: TCCCTTTCCCACCTCTTGCCAGAAGGACTCCCTTGC...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGTTGGCTGGGAACTCTTaGTCACTGTTCACCTTAAAG +
Preference number: 4 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWLAGNS*SLFTLK
Trigger: CTTTAAGGTGAACAGTGACCAAGAGTTCCCAGCCAA...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTGTGATGCTTTCACCCTaGAGACCGTCTGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTVMLSP*RPSEKM
Trigger: CATCTTCTCAGACGGTCTCCAGGGTGAAAGCATCAC...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGTCTCATCTCTTTGTGTaGAGCCCAGAGATATCACAA +
Preference number: 4 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGSHLFV*SPEISQ
Trigger: TTGTGATATCTCTGGGCTCCACACAAAGAGATGAGA...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGGATCGAGTGGGTAGCTaGCTAATTCTTCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: AIMTNIFFWQALTKVIKADRVGS*LILPSH
Trigger: ATGAGATGGAAGAATTAGCCAGCTACCCACTCGATC...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATATCCTCAGACTCTGCTaGAGCCAGCACCACCAGGAT +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHILRLC*SQHHQD
Trigger: ATCCTGGTGGTGCTGGCTTCAGCAGAGTCTGAGGAT...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TGTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATAGTCAGAGCCACGGATaGGATAGCTGGTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: CFDTLFENSSVSRFTCWHSQSHG*DSWCLS
Trigger: ACTCAGACACCAGCTATCTCATCCGTGGCTCTGACT...ATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATGGCCCCAACATTAGATaGCCCAGTCTGGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHGPNIR*PSLERE
Trigger: CTCTCTCTCCAGACTGGGGCATCTAATGTTGGGGCC...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTCAGCTGTGTTTTGTTTaGCTCGCCAATCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLQLCFV*LANPDG
Trigger: GCCATCGGGATTGGCGAGGCAAACAAAACACAGCTG...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTTTATCACACTTGGCTTaGAGGTCTCTGCCGGGATAT +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTLSHLA*RSLPGY
Trigger: ATATCCCGGCAGAGACCTGCAAGCCAAGTGTGATAA...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTATGCACTGTCTTCTGTaGCAGCATTCTCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLMHCLL*QHSLGQ
Trigger: CTGGCCCAGAGAATGCTGGCACAGAAGACAGTGCAT...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GCAAATTTAGTTCTAGTTCCTGCCCCGACCCTTCTAATAAATGATTGGCATTTTAGGAGCAGGTACAACTaGCGCATCAGATCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ANLVLVPAPTLLINDWHFRSRYN*RIRSAV
Trigger: CACTGCTGATCTGATGCGGCAGTTGTACCTGCTCCT...AAAATGCCAATCATTTATTAGAAGGGTCGGGGCAGGAACTAGAACTAAATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTCCCTCAGATTCTGTGTaGTCCCCACTGACTCATCCA +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLPSDSV*SPLTHP
Trigger: TGGATGAGTCAGTGGGGACCACACAGAATCTGAGGG...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCTCTATGGCCTTCAGATaGTCAAAGTTCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSSMAFR*SKFSTW
Trigger: CCATGTTGAGAACTTTGACCATCTGAAGGCCATAGA...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTTGTGTTTTCTTGGATTaGGGGTTCCCAGGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTCVFLD*GFPGRD
Trigger: GTCTCTTCCTGGGAACCCCCAATCCAAGAAAACACA...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR CAA 72 bp GCTCTGTTTCCAGGTTCACATGTTGGCATGATTTCTTaGGCAGCAAAACTCAAGTCCACACAATGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: ALFPGSHVGMIS*AAKLKSTQCKA
Trigger: TGCTTTGCATTGTGTGGACTTGAGTTTTGCTGCCAAAGAAATCATGCCAACATGTGAACCTGGAAACAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TGTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATTTGGGGCTACAGCTGTaGTTAAGTCCACAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CFDTLFENSSVSRFTCWHLGLQL*LSPQLS
Trigger: GGACAACTGTGGACTTAATCACAGCTGTAGCCCCAA...ATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATTCAGAGTGTTTCTGTTaGTGGGAGACATCCTATCTA +
Preference number: 4 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDSECFC*WETSYL
Trigger: TAGATAGGATGTCTCCCATCAACAGAAACACTCTGA...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATCGCCCTTCTGGCCTTTaGTGTTGCTGTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHRPSGL*CCCLFL
Trigger: CAGGAAAAGACAGCAACATCAAAGGCCAGAAGGGCG...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTTTGTCAACTGTCCACTaGAGGGCATGCCCAATAAAA +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTLSTVH*RACPIK
Trigger: TTTTATTGGGCATGCCCTTCAGTGGACAGTTGACAA...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATTCAGCCCAAGCCGCATaGAGTTGTCCTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHSAQAA*SCPSHP
Trigger: TGGATGTGAAGGACAACTGCATGCGGCTTGGGCTGA...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCCTTTTTCAAGTCAATaGCATCCGTGTAGCGAGAGA +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTPFSSQ*HPCSER
Trigger: TCTCTCGCTACACGGATGGCATTGACTTGAAAAAGG...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTAAGCCAGGACACAGATaGCAAGGTCTTTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLKPGHR*QGLSGP
Trigger: AGGTCCTGAAAGACCTTGGCATCTGTGTCCTGGCTT...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATGGGGGAATATATAGGTTaGCCTGCTGTGCCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: VLIHCLRIALFPGSHVGMGEYIG*PAVPLG
Trigger: TCCTAAAGGCACAGCAGGGCAACCTATATATTCCCC...CATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGACTTGGTATTTTATCTaGGAAAGAAGCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGTWYFI*ERSCRR
Trigger: TCTCCTACAGCTTCTTTCCCAGATAAAATACCAAGT...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TGTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATGAGAACGCTGTCATTTaGCTTTCCATCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: CFDTLFENSSVSRFTCWHENAVI*LSISQH
Trigger: GTGCTGACTGATGGAAAGTCAAATGACAGCGTTCTC...ATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCAAGCTGTCAAACGCTaGTTTCTGATAGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTQAVKR*FLIDLE
Trigger: TTCCAGATCTATCAGAAAGCAGCGTTTGACAGCTTG...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTCTTTCTTCCCTGCCATaGTCTCCAGTTCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLLSSLP*SPVHLG
Trigger: ACCAAGATGAACTGGAGACCATGGCAGGGAAGAAAG...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCTGTCACATCATAGCGTaGAGAACTAGATGTTATAAC +
Preference number: 4 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSCHIIA*RTRCYN
Trigger: GTTATAACATCTAGTTCTCCACGCTATGATGTGACA...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATGGTCTAGCATCCCAATaGTCAGCTGAGTCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHGLASQ*SAESCS
Trigger: ACTACAGGACTCAGCTGACCATTGGGATGCTAGACC...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATCATAGCCTTGACATTTaGCCCTCAAAGCCACCGTCT +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHHSLDI*PSKPPS
Trigger: AGACGGTGGCTTTGAGGGCCAAATGTCAAGGCTATG...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTAGTAATTATCTTTTCTaGATTGCCTGTGATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTSNYLF*IACDGQ
Trigger: CTGCCCATCACAGGCAATTCAGAAAAGATAATTACT...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTGCACGTCTGATCGAATaGACAAATGGCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLARLIE*TNGLMN
Trigger: GTTCATCAAGCCATTTGTTCATTCGATCAGACGTGC...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATGTAAGACCTTTGAGTTaGTTGATGTTAAAAACAGCC +
Preference number: 4 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDVRPLS*LMLKTA
Trigger: GGCTGTTTTTAACATCAAGCAACTCAAAGGTCTTAC...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTTCAAAGTTCTCAACATaGAAAACCAGACTGCCATCT +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTSKFST*KTRLPS
Trigger: AGATGGCAGTCTGGTTTTCCATGTTGAGAACTTTGA...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTTTCTGCACAGGTGTTTaGAAAACACTTGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTFCTGV*KTLVIA
Trigger: TGCTATGACAAGTGTTTTCCAAACACCTGTGCAGAA...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTGTTACAAGTCTCTTGTaGATTATTACACAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTVTSLL*IITQSL
Trigger: GAGACTCTGTGTAATAATTCACAAGAGACTTGTAAC...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp TGTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATAGTTTCTGGATTTGCTaGTGGAATTCAGACTGGTTG +
Preference number: 4 (lower is better)
Translates to: CFDTLFENSSVSRFTCWHSFWIC*WNSDWL
Trigger: CAACCAGTCTGAATTCCAGCAGCAAATCCAGAAACT...ATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp GCAAATTTAGTTCTAGTTCCTGCCCCGACCCTTCTAATAAATGATTGGCATTTTATTTCCTACACCCACTaGAAAGATGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: ANLVLVPAPTLLINDWHFISYTH*KDGDAF
Trigger: AAAGGCATCACCATCTTTGCAGTGGGTGTAGGAAAT...AAAATGCCAATCATTTATTAGAAGGGTCGGGGCAGGAACTAGAACTAAATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp GTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATGTTCCAAATTCAAAGCTaGAAAACTCATCGTGACCGA +
Preference number: 4 (lower is better)
Translates to: VLIHCLRIALFPGSHVGMFQIQS*KTHRDR
Trigger: TCGGTCACGATGAGTTTTCCAGCTTTGAATTTGGAA...CATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTCGCTGGCGATGTTTTTaGAATTGTCTAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLRWRCF*NCLRGM
Trigger: CATTCCTCTTAGACAATTCCAAAAACATCGCCAGCG...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR TCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTATGGTTTTCTCCAGCTaGAATCACAATGATGACCTT +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLMVFSS*NHNDDL
Trigger: AAGGTCATCATTGTGATTTCAGCTGGAGAAAACCAT...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTAATATAATTCAGATCTaGCTTGTACATTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTNIIQI*LVHSPK
Trigger: CTTGGGAGAATGTACAAGCCAGATCTGAATTATATT...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp TGTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATTGTTTTTCCTCAGATTaGGGGTTCCTACAAAGACAT +
Preference number: 4 (lower is better)
Translates to: CFDTLFENSSVSRFTCWHCFSSD*GFLQRH
Trigger: ATGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACA...ATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATCTTTGTCTAAAGGGTTaGTTTCACCTGCAGTTACTA +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHLCLKG*FHLQLL
Trigger: TAGTAACTGCAGGTGAAACCAACCCTTTAGACAAAG...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR GCA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATAGGGTTGGTTTCACCTaGAGTTACTATAAAGATAAC +
Preference number: 4 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHRVGFT*SYYKDN
Trigger: GTTATCTTTATAGTAACTGCAGGTGAAACCAACCCT...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CCA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTTCAAAGTTGTCTACATaGACAGTGTTTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLSKLST*TVFSFF
Trigger: GAAGAAAGAAAACACTGTCCATGTAGACAACTTTGA...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
3UTR CAA 72 bp TTCCAATTACAAACTGTTTTTACTCAAGGGTCTAATTaGAGATGTAGATGTGATGGCGATCATGACAAACAT +
Preference number: 4 (lower is better)
Translates to: FQLQTVFTQGSN*RCRCDGDHDKH
Trigger: ATGTTTGTCATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTGTAATTGGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS CCA 90 bp CGCACCATGTCATCTGATGCTCTGTGGGTGACCAGCACAGCAATCTaGGGGACGCCCTGGGCCTTCCTGCTGCCACTGGACTCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: RTMSSDALWVTSTAI*GTPWAFLLPLDSEK
Trigger: CTTCTCAGAGTCCAGTGGCAGCAGGAAGGCCCAGGGCGTCCCCCAGATTGCTGTGCTGGTCACCCACAGAGCATCAGATGACATGGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp TGGGAAGCCCTTCTCGCCATCTTCCCCAGCAGCGCCTCTGATGCCTaGGTAACCCTGATTGCCAGGGTCACCTTTTTGTCCCTTTCCCCC +
Preference number: 5 (lower is better)
Translates to: WEALLAIFPSSASDA*VTLIARVTFLSLSP
Trigger: GGGGGAAAGGGACAAAAAGGTGACCCTGGCAATCAGGGTTACCCAGGCATCAGAGGCGCTGCTGGGGAAGATGGCGAGAAGGGCTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CTGAGCCTGTCTGACTGCCGCTCCAGCAAGGTGATGCTTTCACCCTaGAGACCGTCTGAGAAGATGAGCAGAACCTGGCCCCTGGATGCA +
Preference number: 5 (lower is better)
Translates to: LSLSDCRSSKVMLSP*RPSEKMSRTWPLDA
Trigger: TGCATCCAGGGGCCAGGTTCTGCTCATCTTCTCAGACGGTCTCCAGGGTGAAAGCATCACCTTGCTGGAGCGGCAGTCAGACAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGTCCCTTGAATCCTTaGGGTCCAGGTCCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLSPLNP*GPGPPG
Trigger: TCCTGGGGGACCTGGACCCAAAGGATTCAAGGGACT...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS GCA 90 bp CTCTTGGTCACTGTTCACCTTAAAGGCCAGGCTCACCTGCGCCTCTaGACCTGCACCACAGCTCACCCCTCTGATAGAGGTGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: LLVTVHLKGQAHLRL*TCTTAHPSDRGDVL
Trigger: GAGGACATCACCTCTATCAGAGGGGTGAGCTGTGGTGCAGGTGCAGAGGCGCAGGTGAGCCTGGCCTTTAAGGTGAACAGTGACCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp ATTGCCAGCGTCACCCTTCTGCCCTGGGTCCCCAGGGAATCCTGTTaGGCCCTTAACTCCTTTTCTTCCTGTCTGACCATAGCCCGGGAT +
Preference number: 5 (lower is better)
Translates to: IASVTLLPWVPRESC*ALNSFSSCLTIARD
Trigger: ATCCCGGGCTATGGTCAGACAGGAAGAAAAGGAGTTAAGGGCCCAACAGGATTCCCTGGGGACCCAGGGCAGAAGGGTGACGCTGGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGCCAAGCCGCATGCAGTaGTCCTTCACATCCACAGAG +
Preference number: 5 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLPSRMQ*SFTSTE
Trigger: CTCTGTGGATGTGAAGGACAACTGCATGCGGCTTGG...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp GCAGCTGTGTTTTGTTTGCCTCGCCAATCCCGATGGCGTGAATGGTaGTCTGCTCAGCCCGCAGTCTGTTGGCAGGTTCGAGAACGCTGT +
Preference number: 5 (lower is better)
Translates to: AAVFCLPRQSRWREW*SAQPAVCWQVRERC
Trigger: ACAGCGTTCTCGAACCTGCCAACAGACTGCGGGCTGAGCAGATCACCATTCACGCCATCGGGATTGGCGAGGCAAACAAAACACAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp ATCTGCCGCAGCTGTGTTTTGTTTGCCTCGCCAATCCCGATGGCGTaGATGGTGATCTGCTCAGCCCGCAGTCTGTTGGCAGGTTCGAGA +
Preference number: 5 (lower is better)
Translates to: ICRSCVLFASPIPMA*MVICSARSLLAGSR
Trigger: TCTCGAACCTGCCAACAGACTGCGGGCTGAGCAGATCACCATTCACGCCATCGGGATTGGCGAGGCAAACAAAACACAGCTGCGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp TCAGCTGCCTCACGTTCTGCGTCAGGCGGCTGCCATGCTCTTCTGTaGACAGGACGTTGGAATGCTGAAGAGCCTTGGCAGTGTAGGTCT +
Preference number: 5 (lower is better)
Translates to: SAASRSASGGCHALL*TGRWNAEEPWQCRS
Trigger: AGACCTACACTGCCAAGGCTCTTCAGCATTCCAACGTCCTGTTCACAGAAGAGCATGGCAGCCGCCTGACGCAGAACGTGAGGCAGCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp GCCTTCCTGCTGCCACTGGACTCTGAGAAGCCTTCTTTCCTCATCTaGTCAATGGCGGCCCCAACATTAGATGCCCCAGTCTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: AFLLPLDSEKPSFLI*SMAAPTLDAPVWRE
Trigger: CTCTCTCCAGACTGGGGCATCTAATGTTGGGGCCGCCATTGAGCAGATGAGGAAAGAAGGCTTCTCAGAGTCCAGTGGCAGCAGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp AACCCTTTCGTCCTTCCCAGCAATCTGCCGCAGCTGTGTTTTGTTTaGCTCGCCAATCCCGATGGCGTGAATGGTGATCTGCTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: NPFVLPSNLPQLCFV*LANPDGVNGDLLSP
Trigger: CGGGCTGAGCAGATCACCATTCACGCCATCGGGATTGGCGAGGCAAACAAAACACAGCTGCGGCAGATTGCTGGGAAGGACGAAAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp GTCACTGTTCACCTTAAAGGCCAGGCTCACCTGCGCCTCTGCACCTaGACCACAGCTCACCCCTCTGATAGAGGTGATGTCCTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: VTVHLKGQAHLRLCT*TTAHPSDRGDVLQD
Trigger: ATCTTGGAGGACATCACCTCTATCAGAGGGGTGAGCTGTGGTGCAGGTGCAGAGGCGCAGGTGAGCCTGGCCTTTAAGGTGAACAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp ACCACCAACAGAGCATCAAGTCCTGCTTCTCTGAGCCTGTCTGACTaGCGCTCCAGCAAGGTGATGCTTTCACCCTGGAGACCGTCTGAG +
Preference number: 5 (lower is better)
Translates to: TTNRASSPASLSLSD*RSSKVMLSPWRPSE
Trigger: CTCAGACGGTCTCCAGGGTGAAAGCATCACCTTGCTGGAGCGGCAGTCAGACAGGCTCAGAGAAGCAGGACTTGATGCTCTGTTGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp GGCACTCAACTCCATGGTGGCCGTGAGGATGGATGCTCTACTGGCTaGCTGGCCATTGCTGAAAAACACAGCCACTCTCCTGGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: GTQLHGGREDGCSTG*LAIAEKHSHSPGVG
Trigger: ACCAACACCAGGAGAGTGGCTGTGTTTTTCAGCAATGGCCAGGCAGCCAGTAGAGCATCCATCCTCACGGCCACCATGGAGTTGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp AAGAGGTGGGAAAGGGAACTGTCTTATCAACGTGGTTGGCAGCTGTaGTTAGAGCTGCAGGTATGGTTGGGGCTGCAGGTGTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KRWERELSYQRGWQL*LELQVWLGLQVWLG
Trigger: CCCCAGCCACACCTGCAGCCCCAACCATACCTGCAGCTCTAACCACAGCTGCCAACCACGTTGATAAGACAGTTCCCTTTCCCACCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CTCAACTCCATGGTGGCCGTGAGGATGGATGCTCTACTGGCTGCCTaGCCATTGCTGAAAAACACAGCCACTCTCCTGGTGTTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: LNSMVAVRMDALLAA*PLLKNTATLLVLVP
Trigger: GGGAACCAACACCAGGAGAGTGGCTGTGTTTTTCAGCAATGGCCAGGCAGCCAGTAGAGCATCCATCCTCACGGCCACCATGGAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCGCTCCCACGGGACAGTaGTTCTCCCTGATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VASSCSVVPFLLRDETRSAPTGQ*FSLMLR
Trigger: CCTCAACATCAGGGAGAACAACTGTCCCGTGGGAGC...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp CTGCTCAGCCCGCAGTCTGTTGGCAGGTTCGAGAACGCTGTCATTTaGCTTTCCATCAGTCAGCACGATGAGGTAACAGGGGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LLSPQSVGRFENAVI*LSISQHDEVTGGSV
Trigger: GACAGAGCCCCCTGTTACCTCATCGTGCTGACTGATGGAAAGTCAAATGACAGCGTTCTCGAACCTGCCAACAGACTGCGGGCTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp ACCCACTGCAAAGATGGTGATGCCTTTGTCTCTGAGTTCCCGTGCTaGCTCGTCGAGTTTATCTCGGTCGTGGGACACGCCATCCGTGAT +
Preference number: 5 (lower is better)
Translates to: THCKDGDAFVSEFPC*LVEFISVVGHAIRD
Trigger: ATCACGGATGGCGTGTCCCACGACCGAGATAAACTCGACGAGGCAGCACGGGAACTCAGAGACAAAGGCATCACCATCTTTGCAGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp TACACCCACTGCAAAGATGGTGATGCCTTTGTCTCTGAGTTCCCGTaGTGCCTCGTCGAGTTTATCTCGGTCGTGGGACACGCCATCCGT +
Preference number: 5 (lower is better)
Translates to: YTHCKDGDAFVSEFP*CLVEFISVVGHAIR
Trigger: ACGGATGGCGTGTCCCACGACCGAGATAAACTCGACGAGGCAGCACGGGAACTCAGAGACAAAGGCATCACCATCTTTGCAGTGGGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp ATTCCCCTGCTTCCTTTGGAGCTAGGACGGCCATGTGTCCCCTTCTaGCCAGTTATCCCTTGTCTTCCTCGTTCTCCTTTCTCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: IPLLPLELGRPCVPF*PVIPCLPRSPFSPF
Trigger: GAAGGGCGAGAAAGGAGAACGAGGAAGACAAGGGATAACTGGGCAGAAGGGGACACATGGCCGTCCTAGCTCCAAAGGAAGCAGGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp GCTGATATCGAGGGCACTCAACTCCATGGTGGCCGTGAGGATGGATaGTCTACTGGCTGCCTGGCCATTGCTGAAAAACACAGCCACTCT +
Preference number: 5 (lower is better)
Translates to: ADIEGTQLHGGREDG*STGCLAIAEKHSHS
Trigger: AGAGTGGCTGTGTTTTTCAGCAATGGCCAGGCAGCCAGTAGAGCATCCATCCTCACGGCCACCATGGAGTTGAGTGCCCTCGATATCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CCTTCTGGCAAGAGGTGGGAAAGGGAACTGTCTTATCAACGTGGTTaGCAGCTGTGGTTAGAGCTGCAGGTATGGTTGGGGCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: PSGKRWERELSYQRG*QLWLELQVWLGLQV
Trigger: CACCTGCAGCCCCAACCATACCTGCAGCTCTAACCACAGCTGCCAACCACGTTGATAAGACAGTTCCCTTTCCCACCTCTTGCCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CTAAGCGGGGATGGCCCTGGAACAAAGGCTGGCCCTGACGGTGAGTaGAAATGTCGAACCCGACCACTACATCCACAAAGCAATTGGCTT +
Preference number: 5 (lower is better)
Translates to: LSGDGPGTKAGPDGE*KCRTRPLHPQSNWL
Trigger: AAGCCAATTGCTTTGTGGATGTAGTGGTCGGGTTCGACATTTCCACTCACCGTCAGGGCCAGCCTTTGTTCCAGGGCCATCCCCGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp TGGAATTCAGACTGGTTGGCGCTTGACCTCAGGGAAGAAATAGTCTaGGCCCTGTCGCTGAAGCTCATCAGCCCAAGCCGCATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: WNSDWLALDLREEIV*ALSLKLISPSRMQL
Trigger: CAACTGCATGCGGCTTGGGCTGATGAGCTTCAGCGACAGGGCTCAGACTATTTCTTCCCTGAGGTCAAGCGCCAACCAGTCTGAATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp GCACTCGGTCCCTACCAACGTCTGCCTTCTTCACCAAGTGGATGGTaGGGTTCATCATGCTTTCTTGCTCACGTGGACCTATGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: ALGPYQRLPSSPSGW*GSSCFLAHVDLCCL
Trigger: CAGGCAGCATAGGTCCACGTGAGCAAGAAAGCATGATGAACCTCACCATCCACTTGGTGAAGAAGGCAGACGTTGGTAGGGACCGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp CTTCTTGTTATGGTAGTCAGAGCCACGGATGAGATAGCTGGTGTCTaGGTCATAGGAGACCACGGCAACCCGTGCTCCCACGGGACAGTT +
Preference number: 5 (lower is better)
Translates to: LLVMVVRATDEIAGV*VIGDHGNPCSHGTV
Trigger: AACTGTCCCGTGGGAGCACGGGTTGCCGTGGTCTCCTATGACTCAGACACCAGCTATCTCATCCGTGGCTCTGACTACCATAACAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp CAGACAGCTCATTCTCTCCTGCCTCGATTCTGTACACCTCGGGGATaGGTAATGCACTGTCTTCTGTGCCAGCATTCTCTGGGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: QTAHSLLPRFCTPRG*VMHCLLCQHSLGQG
Trigger: TCCCTGGCCCAGAGAATGCTGGCACAGAAGACAGTGCATTACTCATCCCCGAGGTGTACAGAATCGAGGCAGGAGAGAATGAGCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp GAGTCCTTCTGGCAAGAGGTGGGAAAGGGAACTGTCTTATCAACGTaGTTGGCAGCTGTGGTTAGAGCTGCAGGTATGGTTGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ESFWQEVGKGTVLST*LAAVVRAAGMVGAA
Trigger: TGCAGCCCCAACCATACCTGCAGCTCTAACCACAGCTGCCAACCACGTTGATAAGACAGTTCCCTTTCCCACCTCTTGCCAGAAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp ATGGCGGCCCCAACATTAGATGCCCCAGTCTGGAGAGAGAGTTTCTaGATTTGCTGCTGGAATTCAGACTGGTTGGCGCTTGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: MAAPTLDAPVWRESF*ICCWNSDWLALDLR
Trigger: CCTGAGGTCAAGCGCCAACCAGTCTGAATTCCAGCAGCAAATCCAGAAACTCTCTCTCCAGACTGGGGCATCTAATGTTGGGGCCGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp GCAACCCTGTCACCAGACTCTGAGGCTGAAGGGTTTGAAGTGATGTaGAAGCTGTCAATCACTGAGCTCACCAGCGCTTTCACGGCTTGG +
Preference number: 5 (lower is better)
Translates to: ATLSPDSEAEGFEVM*KLSITELTSAFTAW
Trigger: CCAAGCCGTGAAAGCGCTGGTGAGCTCAGTGATTGACAGCTTCCACATCACTTCAAACCCTTCAGCCTCAGAGTCTGGTGACAGGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp CTCCAGGAAGTTCTGCAGGTCCCTCAGATTCTGTGTGGTCCCCACTaGCTCATCCACCAAGAATATAAGGTCGGCAAGGGAGTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LQEVLQVPQILCGPH*LIHQEYKVGKGVLL
Trigger: CAGAAGGACTCCCTTGCCGACCTTATATTCTTGGTGGATGAGTCAGTGGGGACCACACAGAATCTGAGGGACCTGCAGAACTTCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp CCAGAGCAAAGACCAGCTCTGTTGGATACACAGGGCACTTGTCTGTaGAATCACGGCTGTGGTCCCTCAGGAACTGGATCAGTTCACAGG +
Preference number: 5 (lower is better)
Translates to: PEQRPALLDTQGTCL*NHGCGPSGTGSVHR
Trigger: CCTGTGAACTGATCCAGTTCCTGAGGGACCACAGCCGTGATTTCACAGACAAGTGCCCTGTGTATCCAACAGAGCTGGTCTTTGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165165.3
CDS TCA 90 bp AAAACACAGCCACTCTCCTGGTGTTGGTTCCCGCAGACATCCGCTTaGAAACGTTGCGGGCCACAAACCTCATTGCATTGCCAATGTCCC +
Preference number: 5 (lower is better)
Translates to: KTQPLSWCWFPQTSA*KRCGPQTSLHCQCP
Trigger: GGGACATTGGCAATGCAATGAGGTTTGTGGCCCGCAACGTTTTCAAGCGGATGTCTGCGGGAACCAACACCAGGAGAGTGGCTGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp GCAAAGCAACCCTGTCACCAGACTCTGAGGCTGAAGGGTTTGAAGTaGTGTGGAAGCTGTCAATCACTGAGCTCACCAGCGCTTTCACGG +
Preference number: 5 (lower is better)
Translates to: AKQPCHQTLRLKGLK*CGSCQSLSSPALSR
Trigger: CCGTGAAAGCGCTGGTGAGCTCAGTGATTGACAGCTTCCACATCACTTCAAACCCTTCAGCCTCAGAGTCTGGTGACAGGGTTGCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp TTGTCCTTCACATCCACAGAGCTGGTGACATTCTCCAGGAAGTTCTaGAGGTCCCTCAGATTCTGTGTGGTCCCCACTGACTCATCCACC +
Preference number: 5 (lower is better)
Translates to: LSFTSTELVTFSRKF*RSLRFCVVPTDSST
Trigger: GGTGGATGAGTCAGTGGGGACCACACAGAATCTGAGGGACCTGCAGAACTTCCTGGAGAATGTCACCAGCTCTGTGGATGTGAAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp AGCAAGCCCTTTCTGCGATGTTTCCCAGGTACTGTGAGAGCGTCTTaGCCAGGTCTAGCATCCCAATGGTCAGCTGAGTCCTGTAGTCAA +
Preference number: 5 (lower is better)
Translates to: SKPFLRCFPGTVRAS*PGLASQWSAESCSQ
Trigger: TTGACTACAGGACTCAGCTGACCATTGGGATGCTAGACCTGGGCAAGACGCTCTCACAGTACCTGGGAAACATCGCAGAAAGGGCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp CCCCGGAGGAGAGGAGCAGGTACAACTGCCGCATCAGATCAGCAGTaGTTTCTGAATGGTTGCCATGACTGTTCCCTAGGAGGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: PRRRGAGTTAASDQQ*FLNGCHDCSLGGRN
Trigger: ATTTCTTCCTCCTAGGGAACAGTCATGGCAACCATTCAGAAAGCACTGCTGATCTGATGCGGCAGTTGTACCTGCTCCTCTCCTCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp TGGATCAAACATGTCACTCACATGCTTGAGAGCAAAGTCAAGGCGTaGCAACCCCTTGCTCTGGGCCACACTGTGGACCTGAGACTTCCA +
Preference number: 5 (lower is better)
Translates to: WIKHVTHMLESKVKA*QPLALGHTVDLRLP
Trigger: TGGAAGTCTCAGGTCCACAGTGTGGCCCAGAGCAAGGGGTTGCCACGCCTTGACTTTGCTCTCAAGCATGTGAGTGACATGTTTGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp AAGTGTGCAGCGCCGAAGCTTCTCCAGTGGCTCATAATCTCCAACTaGGGGGACTGGAATCACCTGAAATGTCCCAGTGTCATCAAACCC +
Preference number: 5 (lower is better)
Translates to: KCAAPKLLQWLIISN*GDWNHLKCPSVIKP
Trigger: GGGTTTGATGACACTGGGACATTTCAGGTGATTCCAGTCCCCCCAGTTGGAGATTATGAGCCACTGGAGAAGCTTCGGCGCTGCACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp AGTGACCAAATCGAATTCCAGGTAGACTGGGCACTCTTCAGTGTTTaGCAGATAGCCTGGGGGAGAGTAGGTCAGGACAGCCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: SDQIEFQVDWALFSV*QIAWGRVGQDSHSV
Trigger: GACAGAGTGGCTGTCCTGACCTACTCTCCCCCAGGCTATCTGCCAAACACTGAAGAGTGCCCAGTCTACCTGGAATTCGATTTGGTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp TTCTGTGATACCAGAGGACTGGTCCAGAGCAAAGACCAGCTCTGTTaGATACACAGGGCACTTGTCTTTCCAACAGGGGCTGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: FCDTRGLVQSKDQLC*IHRALVFPTGAVVP
Trigger: AGGGACCACAGCCCCTGTTGGAAAGACAAGTGCCCTGTGTATCCAACAGAGCTGGTCTTTGCTCTGGACCAGTCCTCTGGTATCACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCGCCAGGGTCACCTTTTaGTCCCTTTCCCCCACGAAA +
Preference number: 5 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFARVTF*SLSPTK
Trigger: TTTCGTGGGGGAAAGGGACAAAAAGGTGACCCTGGC...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp AACCTGGCCCCTGGATGCAGATCTTTCCTCAAACATGTCCCAAAGTaGCTGCAAGAACGGTGCATCCAGATGAGTTGGTCCACGGACTGT +
Preference number: 5 (lower is better)
Translates to: NLAPGCRSFLKHVPK*LQERCIQMSWSTDC
Trigger: ACAGTCCGTGGACCAACTCATCTGGATGCACCGTTCTTGCAGTCACTTTGGGACATGTTTGAGGAAAGATCTGCATCCAGGGGCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp TCTGCCTTCTTCACCAAGTGGATGGTGAGGTTCATCATGCTTTCTTaGTCACGTGGACCTATGCTGCCTGAGTGGTCCAGCACAAACACG +
Preference number: 5 (lower is better)
Translates to: SAFFTKWMVRFIMLS*SRGPMLPEWSSTNT
Trigger: CGTGTTTGTGCTGGACCACTCAGGCAGCATAGGTCCACGTGAGCAAGAAAGCATGATGAACCTCACCATCCACTTGGTGAAGAAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp GGAGTATGTGAGCGCTCCAATCTGCACTCGGTCCCTACCAACGTCTaGCTTCTTCACCAAGTGGATGGTGAGGTTCATCATGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: GVCERSNLHSVPTNV*LLHQVDGEVHHAFL
Trigger: CAAGAAAGCATGATGAACCTCACCATCCACTTGGTGAAGAAGGCAGACGTTGGTAGGGACCGAGTGCAGATTGGAGCGCTCACATACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp TGCCATGGTCTCCAGTTCATCTTGGTTGGCATTTCCTACACCCACTaGAAAGATGGTGATGCCTTTGTCTCTGAGTTCCCGTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: CHGLQFILVGISYTH*KDGDAFVSEFPCCL
Trigger: GAGGCAGCACGGGAACTCAGAGACAAAGGCATCACCATCTTTGCAGTGGGTGTAGGAAATGCCAACCAAGATGAACTGGAGACCATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CCAATCTGCACTCGGTCCCTACCAACGTCTGCCTTCTTCACCAAGTaGATGGTGAGGTTCATCATGCTTTCTTGCTCACGTGGACCTATG +
Preference number: 5 (lower is better)
Translates to: PICTRSLPTSAFFTK*MVRFIMLSCSRGPM
Trigger: CATAGGTCCACGTGAGCAAGAAAGCATGATGAACCTCACCATCCACTTGGTGAAGAAGGCAGACGTTGGTAGGGACCGAGTGCAGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp TTCTGTGATACCAGAGGACTGGTCCAGAGCAAAGACCAGCTCTGTTaGATACACAGGGCACTTGTCTGTGAAATCACGGCTGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: FCDTRGLVQSKDQLC*IHRALVCEITAVVP
Trigger: AGGGACCACAGCCGTGATTTCACAGACAAGTGCCCTGTGTATCCAACAGAGCTGGTCTTTGCTCTGGACCAGTCCTCTGGTATCACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165165.3
CDS-3UTR CAA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCCGACCAGGAGGGCCTaGAGACCCCTGAAGTCCACT +
Preference number: 5 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDPTRRA*RPLKST
Trigger: AGTGGACTTCAGGGGTCTCAAGGCCCTCCTGGTCGG...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGAGAGATGAAACCCGGTCCACGTCCTCCTACTCGTaGAGAAGCATCTATGAGGAA +
Preference number: 5 (lower is better)
Translates to: VASSCSVVPFLLRDETRSTSSYS*RSIYEE
Trigger: TTCCTCATAGATGCTTCTCAACGAGTAGGAGGACGT...GGACCGGGTTTCATCTCTCAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGTTGTTTTTCCTCAGATaGGGGGTTCCTACAAAGACA +
Preference number: 5 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLLFFLR*GVPTKT
Trigger: TGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACAA...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp GTGACTGCAAGAACGGTGCATCCAGATGAGTTGGTCCACGGACTGTaGCGTGCAACAAGCTGTCAAACGCTGCTTTCTGATAGATCTGGA +
Preference number: 5 (lower is better)
Translates to: VTARTVHPDELVHGL*RATSCQTLLSDRSG
Trigger: TCCAGATCTATCAGAAAGCAGCGTTTGACAGCTTGTTGCACGTCACAGTCCGTGGACCAACTCATCTGGATGCACCGTTCTTGCAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp TCCTCAAACATGTCCCAAAGTGACTGCAAGAACGGTGCATCCAGATaGGTTGGTCCACGGACTGTGACGTGCAACAAGCTGTCAAACGCT +
Preference number: 5 (lower is better)
Translates to: SSNMSQSDCKNGASR*VGPRTVTCNKLSNA
Trigger: AGCGTTTGACAGCTTGTTGCACGTCACAGTCCGTGGACCAACTCATCTGGATGCACCGTTCTTGCAGTCACTTTGGGACATGTTTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp GTAATGCACTGTCTTCTGTGCCAGCATTCTCTGGGCCAGGGAAGGTaGGATTATCACACTTGGCTTGCAGGTCTCTGCCGGGATATTTGT +
Preference number: 5 (lower is better)
Translates to: VMHCLLCQHSLGQGR*DYHTWLAGLCRDIC
Trigger: ACAAATATCCCGGCAGAGACCTGCAAGCCAAGTGTGATAATCTCACCTTCCCTGGCCCAGAGAATGCTGGCACAGAAGACAGTGCATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp CCAGCATTCTCTGGGCCAGGGAAGGTGAGATTATCACACTTGGCTTaGAGGTCTCTGCCGGGATATTTGTTGATAGCACGTCTGATCGAA +
Preference number: 5 (lower is better)
Translates to: PAFSGPGKVRLSHLA*RSLPGYLLIARLIE
Trigger: TTCGATCAGACGTGCTATCAACAAATATCCCGGCAGAGACCTGCAAGCCAAGTGTGATAATCTCACCTTCCCTGGCCCAGAGAATGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp GCAGGTACAACTGCCGCATCAGATCAGCAGTGCTTTCTGAATGGTTaGCATGACTGTTCCCTAGGAGGAAGAAATGCTGCTCCTGAGATC +
Preference number: 5 (lower is better)
Translates to: AGTTAASDQQCFLNG*HDCSLGGRNAAPEI
Trigger: GATCTCAGGAGCAGCATTTCTTCCTCCTAGGGAACAGTCATGGCAACCATTCAGAAAGCACTGCTGATCTGATGCGGCAGTTGTACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCTGTCACGGGGAAGGCTGTTGCCTCTTCTTGCTCAGTGGTCCCATTCCTCCTGCTCAGTTTGTCAAAGTaGTCTACATGGACAGTGTTT +
Preference number: 5 (lower is better)
Translates to: AVTGKAVASSCSVVPFLLLSLSK*STWTVF
Trigger: AAACACTGTCCATGTAGACAACTTTGACAAACTGAG...CAGGAGGAATGGGACCACTGAGCAAGAAGAGGCAACAGCCTTCCCCGTGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCACATCCACAAAGCAATaGGCTTTCCCACAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFTSTKQ*AFPQLW
Trigger: CCAGAGCTGTGGGAAAGCCAATTGCTTTGTGGATGT...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGCCAGGAATTCCAGGATaGCCAGCGTCACCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWPGIPG*PASPFC
Trigger: GCAGAAGGGTGACGCTGGCAATCCTGGAATTCCTGG...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGGGCACTCTTCAGTGTTaGGCAGATAGCCTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: AIMTNIFFWQALTKVIKAGTLQC*ADSLGE
Trigger: CTCCCCCAGGCTATCTGCCAAACACTGAAGAGTGCC...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp GCCATCCGTGTAGCGAGAGACAGGAAATTCCACTTCATTCTTATGTaGATACTGCACAACTCCGACCCGAACTTTGTTGGGGCCGATAGG +
Preference number: 5 (lower is better)
Translates to: AIRVARDRKFHFILM*ILHNSDPNFVGADR
Trigger: CCTATCGGCCCCAACAAAGTTCGGGTCGGAGTTGTGCAGTATTCACATAAGAATGAAGTGGAATTTCCTGTCTCTCGCTACACGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp GCTGTTCCTTATAAACATCCCCTATGCCCAAAGCCAGGACACAGATaGCAAGGTCTTTCAGGACCTTTACCGCGTCTGTCACATCATAGC +
Preference number: 5 (lower is better)
Translates to: AVPYKHPLCPKPGHR*QGLSGPLPRLSHHS
Trigger: GCTATGATGTGACAGACGCGGTAAAGGTCCTGAAAGACCTTGGCATCTGTGTCCTGGCTTTGGGCATAGGGGATGTTTATAAGGAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp ATGAGTTGGTCCACGGACTGTGACGTGCAACAAGCTGTCAAACGCTaGTTTCTGATAGATCTGGAACTTGGCTGGGAACTCTTGGTCACT +
Preference number: 5 (lower is better)
Translates to: MSWSTDCDVQQAVKR*FLIDLELGWELLVT
Trigger: AGTGACCAAGAGTTCCCAGCCAAGTTCCAGATCTATCAGAAAGCAGCGTTTGACAGCTTGTTGCACGTCACAGTCCGTGGACCAACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp ACTGACTCATCCACCAAGAATATAAGGTCGGCAAGGGAGTCCTTCTaGCAAGAGGTGGGAAAGGGAACTGTCTTATCAACGTGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: TDSSTKNIRSARESF*QEVGKGTVLSTWLA
Trigger: TGCCAACCACGTTGATAAGACAGTTCCCTTTCCCACCTCTTGCCAGAAGGACTCCCTTGCCGACCTTATATTCTTGGTGGATGAGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp GCCAAGGTCTTTCAGGACCTTTACCGCGTCTGTCACATCATAGCGTaGAGAACTAGATGTTATAACAACCAGAGTCTGAGGGACACCAGC +
Preference number: 5 (lower is better)
Translates to: AKVFQDLYRVCHIIA*RTRCYNNQSLRDTS
Trigger: GCTGGTGTCCCTCAGACTCTGGTTGTTATAACATCTAGTTCTCCACGCTATGATGTGACAGACGCGGTAAAGGTCCTGAAAGACCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CAACAAGCTGTCAAACGCTGCTTTCTGATAGATCTGGAACTTGGCTaGGAACTCTTGGTCACTGTTCACCTTAAAGGCCAGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: QQAVKRCFLIDLELG*ELLVTVHLKGQAHL
Trigger: CAGGTGAGCCTGGCCTTTAAGGTGAACAGTGACCAAGAGTTCCCAGCCAAGTTCCAGATCTATCAGAAAGCAGCGTTTGACAGCTTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp AGCTCTGTTGGATACACAGGGCACTTGTCTGTGAAATCACGGCTGTaGTCCCTCAGGAACTGGATCAGTTCACAGGGGGAATATATAGGT +
Preference number: 5 (lower is better)
Translates to: SSVGYTGHLSVKSRL*SLRNWISSQGEYIG
Trigger: ACCTATATATTCCCCCTGTGAACTGATCCAGTTCCTGAGGGACCACAGCCGTGATTTCACAGACAAGTGCCCTGTGTATCCAACAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165165.3
CDS-3UTR CAA 90 bp CCGACCCTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGTCCTCTGCTACCTTTaGGACCTGAAGAACCCTTTG +
Preference number: 5 (lower is better)
Translates to: PTLLINDWHFLAGTTAAGVLCYL*DLKNPL
Trigger: CAAAGGGTTCTTCAGGTCCAAAAGGTAGCAGAGGAC...CCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCTCTTCGCCATCTTGTTaGCTGTTCACTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LLINDWHFLAGTTAAGESSSPSC*LFTGAG
Trigger: CCCAGCTCCAGTGAACAGCAAACAAGATGGCGAAGA...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp GAGCAAGACCCAGTTCTTCTCTGCCATGACTTTCATGTTCAGAAGTaGGACTCGCCATTGCTACAGATTCCCGGTCATTTCCATAGTGGC +
Preference number: 5 (lower is better)
Translates to: EQDPVLLCHDFHVQK*DSPLLQIPGHFHSG
Trigger: GCCACTATGGAAATGACCGGGAATCTGTAGCAATGGCGAGTCTCACTTCTGAACATGAAAGTCATGGCAGAGAAGAACTGGGTCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp ACATTAGATGCCCCAGTCTGGAGAGAGAGTTTCTGGATTTGCTGCTaGAATTCAGACTGGTTGGCGCTTGACCTCAGGGAAGAAATAGTC +
Preference number: 5 (lower is better)
Translates to: TLDAPVWRESFWICC*NSDWLALDLREEIV
Trigger: GACTATTTCTTCCCTGAGGTCAAGCGCCAACCAGTCTGAATTCCAGCAGCAAATCCAGAAACTCTCTCTCCAGACTGGGGCATCTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp AGGTTCATCATGCTTTCTTGCTCACGTGGACCTATGCTGCCTGAGTaGTCCAGCACAAACACGATGTCTAAGAGTTCGATCCTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: RFIMLSCSRGPMLPE*SSTNTMSKSSILLQ
Trigger: TTGCAAGAGGATCGAACTCTTAGACATCGTGTTTGTGCTGGACCACTCAGGCAGCATAGGTCCACGTGAGCAAGAAAGCATGATGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp AAAGTGATCAAAGCGAGTGAACCAAGCTGTCACGGGGAAGGCTGTTGCCTCTTCAGAGAGTTTCTGGATTaGCTGCTGGAATTCAGACTG +
Preference number: 5 (lower is better)
Translates to: KVIKASEPSCHGEGCCLFREFLD*LLEFRL
Trigger: CAGTCTGAATTCCAGCAGCAAATCCAGAAACTCTCT...GAAGAGGCAACAGCCTTCCCCGTGACAGCTTGGTTCACTCGCTTTGATCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATAGGCGTGGCAACCCCTaGCTCTGGGCCACACTGTGG +
Preference number: 5 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHRRGNP*LWATLW
Trigger: CCACAGTGTGGCCCAGAGCAAGGGGTTGCCACGCCT...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCACAAACCTCATTGCATaGCCAATGTCCCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LLINDWHFLAGTTAAGESTNLIA*PMSLAF
Trigger: GAAGGCCAGGGACATTGGCAATGCAATGAGGTTTGT...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATGGATACACAGGGCACTaGTCTTTCCAACAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: CDGDHDKHLLLAGTHQSDGYTGH*SFQQGL
Trigger: CAGCCCCTGTTGGAAAGACAAGTGCCCTGTGTATCC...ATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp AACGTAAACCAAATGGTCGCCTCTGTGATCCTCCAACACAAAAGATaGGTCTTTCCCAGCGTTCAGCTCTTGATCAGCCAGGCTGATTGT +
Preference number: 5 (lower is better)
Translates to: NVNQMVASVILQHKR*VFPSVQLLISQADC
Trigger: ACAATCAGCCTGGCTGATCAAGAGCTGAACGCTGGGAAAGACTCATCTTTTGTGTTGGAGGATCACAGAGGCGACCATTTGGTTTACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CAGCCGGTTTTATCCAGCTCCATTTGTTCAGCACGAGTAGAAACTTaGGTCCAGATTTCATTGCGGATCTTCTTCAGGAAGTTCCCACTG +
Preference number: 5 (lower is better)
Translates to: QPVLSSSICSARVET*VQISLRIFFRKFPL
Trigger: CAGTGGGAACTTCCTGAAGAAGATCCGCAATGAAATCTGGACCCAAGTTTCTACTCGTGCTGAACAAATGGAGCTGGATAAAACCGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp GGTGAGTGGAAATGTCGAACCCGACCACTACATCCACAAAGCAATTaGCTTTCCCACAGCTCTGGCAAATTTCACGAACCATTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GEWKCRTRPLHPQSN*LSHSSGKFHEPFSS
Trigger: AGAAGAGAATGGTTCGTGAAATTTGCCAGAGCTGTGGGAAAGCCAATTGCTTTGTGGATGTAGTGGTCGGGTTCGACATTTCCACTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CAATCACTGAGCTCACCAGCGCTTTCACGGCTTGGAAGTCATCGCTaGCGATGTTTTTGGAATTGTCTAAGAGGAATGCAACATCCATGT +
Preference number: 5 (lower is better)
Translates to: QSLSSPALSRLGSHR*RCFWNCLRGMQHPC
Trigger: ACATGGATGTTGCATTCCTCTTAGACAATTCCAAAAACATCGCCAGCGATGACTTCCAAGCCGTGAAAGCGCTGGTGAGCTCAGTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp ATGTGGAAGCTGTCAATCACTGAGCTCACCAGCGCTTTCACGGCTTaGAAGTCATCGCTGGCGATGTTTTTGGAATTGTCTAAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: MWKLSITELTSAFTA*KSSLAMFLELSKRN
Trigger: ATTCCTCTTAGACAATTCCAAAAACATCGCCAGCGATGACTTCCAAGCCGTGAAAGCGCTGGTGAGCTCAGTGATTGACAGCTTCCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp GTGTGGAGCCCAGAGATATCACAAATACGACATAGCCTTGACATTTaGCCCTCAAAGCCACCGTCTTCACAAATTCCTTCTCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: VWSPEISQIRHSLDI*PSKPPSSQIPSPHG
Trigger: ACCATGAGGAGAAGGAATTTGTGAAGACGGTGGCTTTGAGGGCCAAATGTCAAGGCTATGTCGTATTTGTGATATCTCTGGGCTCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCGTCTTATCAACGTGGTaGGCAGCTGTGGTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSVLSTW*AAVVRA
Trigger: AGCTCTAACCACAGCTGCCAACCACGTTGATAAGAC...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CCGACCCTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGTCAGAGTGTTTCTGTaGATGGGAGACATCCTATCT +
Preference number: 5 (lower is better)
Translates to: PTLLINDWHFLAGTTAAGVRVFL*MGDILS
Trigger: AGATAGGATGTCTCCCATCAACAGAAACACTCTGAC...CCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAGGGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGAAGATGGTGATGCCTTaGTCTCTGAGTTCCCGTGCT +
Preference number: 5 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWKMVMP*SLSSRA
Trigger: AGCACGGGAACTCAGAGACAAAGGCATCACCATCTT...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCTCCAGTTCATCTTGGTaGGCATTTCCTACACCCACT +
Preference number: 5 (lower is better)
Translates to: LLINDWHFLAGTTAAGESSSSSW*AFPTPT
Trigger: AGTGGGTGTAGGAAATGCCAACCAAGATGAACTGGA...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TTGAGATGTAGATGTGATGGCGATCATGACAAACATCTTCTTTTGGCAGGCACTAGGTCCTTGTGTACCTaGAGGTCCTGGGTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LRCRCDGDHDKHLLLAGTRSLCT*RSWVSC
Trigger: GCAGGAAACCCAGGACCTCAAGGTACACAAGGACCT...AGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGCCATCACATCTACATCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp GGATTTGCTCAAACTCTTTCTTACGGATGCTGGACGACCCATCAATaGGAAAATAGATGTCGGCCTCCTTTGTATCCACACAGCCGGTTT +
Preference number: 5 (lower is better)
Translates to: GFAQTLSYGCWTTHQ*ENRCRPPLYPHSRF
Trigger: AAACCGGCTGTGTGGATACAAAGGAGGCCGACATCTATTTTCTCATTGATGGGTCGTCCAGCATCCGTAAGAAAGAGTTTGAGCAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp ACAAACCTCATTGCATTGCCAATGTCCCTGGCCTTCCGGGGCACTTaGTATTTTATCTGGGAAAGAAGCTGTAGGAGATGCTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: TNLIALPMSLAFRGT*YFIWERSCRRCFLL
Trigger: TAACAAGAAGCATCTCCTACAGCTTCTTTCCCAGATAAAATACCAAGTGCCCCGGAAGGCCAGGGACATTGGCAATGCAATGAGGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp TCACCAGCGCTTTCACGGCTTGGAAGTCATCGCTGGCGATGTTTTTaGAATTGTCTAAGAGGAATGCAACATCCATGTAGGAATTCTCAG +
Preference number: 5 (lower is better)
Translates to: SPALSRLGSHRWRCF*NCLRGMQHPCRNSQ
Trigger: CTGAGAATTCCTACATGGATGTTGCATTCCTCTTAGACAATTCCAAAAACATCGCCAGCGATGACTTCCAAGCCGTGAAAGCGCTGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGCTTGGCTGGGAACTCTaGGTCACTGTTCACCTTAAA +
Preference number: 5 (lower is better)
Translates to: AIMTNIFFWQALTKVIKALGWEL*VTVHLK
Trigger: TTTAAGGTGAACAGTGACCAAGAGTTCCCAGCCAAG...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGTTGTGTTTTCTTGGATaGGGGGTTCCCAGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: AIMTNIFFWQALTKVIKALCFLG*GVPRKR
Trigger: TCTCTTCCTGGGAACCCCCAATCCAAGAAAACACAA...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCAAATACGACATAGCCTaGACATTTGGCCCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: LLINDWHFLAGTTAAGESKYDIA*TFGPQS
Trigger: GCTTTGAGGGCCAAATGTCAAGGCTATGTCGTATTT...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTTCTAATAAATGATTGGCATTTTCTGGCTGGAACTACTGCCGCAGGGGAGTCCGTCCATGTAATATTCTaGAAGAGAAGCATCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LLINDWHFLAGTTAAGESVHVIF*KRSIPR
Trigger: CCTGGGGATGCTTCTCTTCAAGAATATTACATGGAC...GGACTCCCCTGCGGCAGTAGTTCCAGCCAGAAAATGCCAATCATTTATTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCGATCCAGAGGGTGGCTaGCTAATTCTTCTAACTCCA +
Preference number: 5 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSDPEGG*LILLTP
Trigger: TGGAGTTAGAAGAATTAGCAAGCCACCCTCTGGATC...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS GCA 90 bp CAGTTTGTCAAAGTTGTCTACATGGACAGTGTTTTCTTTCTTCCCTaGCATGGTCTCCAGTTCATCTTGGTTGGCATTTCCTACACCCAC +
Preference number: 5 (lower is better)
Translates to: QFVKVVYMDSVFFLP*HGLQFILVGISYTH
Trigger: GTGGGTGTAGGAAATGCCAACCAAGATGAACTGGAGACCATGGCAGGGAAGAAAGAAAACACTGTCCATGTAGACAACTTTGACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATGAAGATGGTCACACTTTaGCTCCTGAGAGCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: VLIHCLRIALFPGSHVGMKMVTL*LLRAVA
Trigger: AGCCACGGCTCTCAGGAGCAAAAGTGTGACCATCTT...CATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGCTTCTGCACAGGTGTTaGGAAAACACTTGTCATAGC +
Preference number: 5 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWLLHRC*ENTCHS
Trigger: GCTATGACAAGTGTTTTCCAAACACCTGTGCAGAAG...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGATCTCCATTGAGCTGTaGAAGGGAAGTGTAGATGTA +
Preference number: 5 (lower is better)
Translates to: LLYFLILLIPQSWNSTYGISIEL*KGSVDV
Trigger: TACATCTACACTTCCCTTCAACAGCTCAATGGAGAT...CCCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGCTGCTGAAGAGACTCTaGGAGATGATGCTTCATTTG +
Preference number: 5 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWLLKRL*EMMLHL
Trigger: CAAATGAAGCATCATCTCCAAGAGTCTCTTCAGCAG...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp TCCCACGGGACAGTTGTTCTCCCTGATGTTGAGGTCACTGACAATTaGAGTGATGGTGTCCCTTGTTTCATTAAATCTCCTTTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: SHGTVVLPDVEVTDN*SDGVPCFIKSPFCD
Trigger: ATCACAGAAAGGAGATTTAATGAAACAAGGGACACCATCACTTCAATTGTCAGTGACCTCAACATCAGGGAGAACAACTGTCCCGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 90 bp GAATGCAACATCCATGTAGGAATTCTCAGGAAAGAAAGGCTCTTCTaGACAGGTGTTTGGAAAACACTTGTCATAGCAAAGTGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: ECNIHVGILRKERLF*TGVWKTLVIAKCAA
Trigger: CGCTGCACACTTTGCTATGACAAGTGTTTTCCAAACACCTGTGCAGAAGAGCCTTTCTTTCCTGAGAATTCCTACATGGATGTTGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp AACCCGACCACTACATCCACAAAGCAATTGGCTTTCCCACAGCTCTaGCAAATTTCACGAACCATTCTCTTCTTCACATCCACATTCTTT +
Preference number: 5 (lower is better)
Translates to: NPTTTSTKQLAFPQL*QISRTILFFTSTFF
Trigger: AAAGAATGTGGATGTGAAGAAGAGAATGGTTCGTGAAATTTGCCAGAGCTGTGGGAAAGCCAATTGCTTTGTGGATGTAGTGGTCGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTAGATGTCGGCCTCCTTaGTATCCACACAGCCGGTTT +
Preference number: 5 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLRCRPP*YPHSRF
Trigger: AAACCGGCTGTGTGGATACAAAGGAGGCCGACATCT...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATGGGTCTCCAGTTCATCTaGGTTGGCATTTCCTACACC +
Preference number: 5 (lower is better)
Translates to: VLIHCLRIALFPGSHVGMGLQFI*VGISYT
Trigger: GGTGTAGGAAATGCCAACCAAGATGAACTGGAGACC...CATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCGATCATGACAAACATCTTCTTTTGGCAGGCACTCACCAAAGTGATCAAAGCGATTACACAGAGTCTCTaGCAGAGGCAGGTAAATATC +
Preference number: 5 (lower is better)
Translates to: AIMTNIFFWQALTKVIKAITQSL*QRQVNI
Trigger: GATATTTACCTGCCTCTGCAAGAGACTCTGTGTAAT...CGCTTTGATCACTTTGGTGAGTGCCTGCCAAAAGAAGATGTTTGTCATGATCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCAAATTTAGTTCTAGTTCCTGCCCCGACCCTTCTAATAAATGATTGGCATTTTCCTGCCTTTCAAGCCTaGAGAGAGAGTCAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: ANLVLVPAPTLLINDWHFPAFQA*RESQSL
Trigger: AAGGGACTGACTCTCTCTCAAGGCTTGAAAGGCAGG...AAAATGCCAATCATTTATTAGAAGGGTCGGGGCAGGAACTAGAACTAAATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTGGGGGAATATATAGGTaGCCCTGCTGTGCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLGGIYR*PCCAFR
Trigger: CCTAAAGGCACAGCAGGGCAACCTATATATTCCCCC...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATGGGCCACAAACCTCATaGCATTGCCAATGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHGPQTS*HCQCPW
Trigger: CCAGGGACATTGGCAATGCAATGAGGTTTGTGGCCC...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGATCACAATGATGACCTaGTGTTTTCTTGGATTGGGG +
Preference number: 5 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWITMMT*CFLGLG
Trigger: CCCCAATCCAAGAAAACACAAGGTCATCATTGTGAT...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp AGAGTTCGATCCTCTTGCAATCATGCAGAGCACACACTCGAAAGATaGGTTTACTCTCTATGGCCTTCAGATGGTCAAAGTTCTCAACAT +
Preference number: 5 (lower is better)
Translates to: RVRSSCNHAEHTLER*VYSLWPSDGQSSQH
Trigger: ATGTTGAGAACTTTGACCATCTGAAGGCCATAGAGAGTAAACTCATCTTTCGAGTGTGTGCTCTGCATGATTGCAAGAGGATCGAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp GAGACTCTTGGAGATGATGCTTCATTTGATGTACAGTGTTGTAAGTaGCCAAATCGAATTCCAGGTAGACTGGGCACTCTTCAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: ETLGDDASFDVQCCK*PNRIPGRLGTLQCL
Trigger: CAAACACTGAAGAGTGCCCAGTCTACCTGGAATTCGATTTGGTCACTTACAACACTGTACATCAAATGAAGCATCATCTCCAAGAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CATTTGGCCCTCAAAGCCACCGTCTTCACAAATTCCTTCTCCTCATaGTTTTCTCCAGCTGAAATCACAATGATGACCTTGTGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: HLALKATVFTNSFSS*FSPAEITMMTLCFL
Trigger: AAGAAAACACAAGGTCATCATTGTGATTTCAGCTGGAGAAAACCATGAGGAGAAGGAATTTGTGAAGACGGTGGCTTTGAGGGCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGCTGCTGATCATCCTGTaGAGAAAAGTTCTCACAAAT +
Preference number: 5 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWLLIIL*RKVLTN
Trigger: ATTTGTGAGAACTTTTCTCAACAGGATGATCAGCAG...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATGAGAGAGTCAGTCCCTaGAATCCTTTGGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHERVSP*NPLGPG
Trigger: ACCTGGACCCAAAGGATTCAAGGGACTGACTCTCTC...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCACGTATGGGCGATGTTTTTGGAATaGTCTAAGAGGAATGCAACA +
Preference number: 5 (lower is better)
Translates to: SALLSHPLNPPVLEFHVWAMFLE*SKRNAT
Trigger: TGTTGCATTCCTCTTAGACAATTCCAAAAACATCGC...CCATACGTGGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GCAAATTTAGTTCTAGTTCCTGCCCCGACCCTTCTAATAAATGATTGGCATTTTTGCATCTTCGCCATCTaGTTTGCTGTTCACTGGAGC +
Preference number: 5 (lower is better)
Translates to: ANLVLVPAPTLLINDWHFCIFAI*FAVHWS
Trigger: GCTCCAGTGAACAGCAAACAAGATGGCGAAGATGCA...AAAATGCCAATCATTTATTAGAAGGGTCGGGGCAGGAACTAGAACTAAATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp GACCCGAACTTTGTTGGGGCCGATAGGAAACATGTCTATCACAGATaGCATAAATATCTGGATTTGCTCAAACTCTTTCTTACGGATGCT +
Preference number: 5 (lower is better)
Translates to: DPNFVGADRKHVYHR*HKYLDLLKLFLTDA
Trigger: AGCATCCGTAAGAAAGAGTTTGAGCAAATCCAGATATTTATGTCATCTGTGATAGACATGTTTCCTATCGGCCCCAACAAAGTTCGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp ATTCATTTACAAAGGTTAGTGCTCCTCCTGTCAGAGTGTTTCTGTTaGTGGGAGACATCCTATCTATGGCTGCATAAATTTCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: IHLQRLVLLLSECFC*WETSYLWLHKFPHA
Trigger: CGCATGAGGAAATTTATGCAGCCATAGATAGGATGTCTCCCATCAACAGAAACACTCTGACAGGAGGAGCACTAACCTTTGTAAATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 90 bp TCCATTGAGCTGTTGAAGGGAAGTGTAGATGTAGTTCTTCATGATTaGTTGGTTGTCGTAGGTTGTAAAGGCAAACTCTGTCTTCACCCT +
Preference number: 5 (lower is better)
Translates to: SIELLKGSVDVVLHD*LVVVGCKGKLCLHP
Trigger: AGGGTGAAGACAGAGTTTGCCTTTACAACCTACGACAACCAATCAATCATGAAGAACTACATCTACACTTCCCTTCAACAGCTCAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CCTCCAAATCTGCTTTACTTTCTCATCCTCTTAATCCCCCAGTCCTGGAATTCCTGTAAGACCTTTGAGTaGCTTGATGTTAAAAACAGC +
Preference number: 5 (lower is better)
Translates to: PPNLLYFLILLIPQSWNSCKTFE*LDVKNS
Trigger: GCTGTTTTTAACATCAAGCAACTCAAAGGTCTTACA...GGAATTCCAGGACTGGGGGATTAAGAGGATGAGAAAGTAAAGCAGATTTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTATGTCACTCACATGCTaGAGAGCAAAGTCAAGGCGT +
Preference number: 5 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLMSLTC*RAKSRR
Trigger: ACGCCTTGACTTTGCTCTCAAGCATGTGAGTGACAT...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp GTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATGAGGTCCCTGATAACCTaGACTTCCTTTGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VLIHCLRIALFPGSHVGMRSLIT*TSFVSF
Trigger: AAAGGAGACAAAGGAAGTCAAGGTTATCAGGGACCT...CATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATCAAAGACCAGCTCTGTaGGATACACAGGGCACTTGT +
Preference number: 5 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHQRPAL*DTQGTC
Trigger: ACAAGTGCCCTGTGTATCCAACAGAGCTGGTCTTTG...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATATCCGCTTGAAAACGTaGCGGGCCACAAACCTCATT +
Preference number: 5 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHIRLKT*RATNLI
Trigger: AATGAGGTTTGTGGCCCGCAACGTTTTCAAGCGGAT...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TGTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATGCTCTAGCATCTGGCTaGGAACGTAAACCAAATGGT +
Preference number: 5 (lower is better)
Translates to: CFDTLFENSSVSRFTCWHALASG*ERKPNG
Trigger: ACCATTTGGTTTACGTTCCAAGCCAGATGCTAGAGC...ATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS GCA 90 bp TCCTGTCAGAGTGTTTCTGTTGATGGGAGACATCCTATCTATGGCTaGATAAATTTCCTCATGCGTGGAGTATTTATTAAGCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: SCQSVSVDGRHPIYG*INFLMRGVFIKLEF
Trigger: GAATTCCAGCTTAATAAATACTCCACGCATGAGGAAATTTATGCAGCCATAGATAGGATGTCTCCCATCAACAGAAACACTCTGACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp GTATCGGACCAAAGGAAAATACAAATATGGAGTAGCCTTGGCACTTaGCTCTCAGAGATGCATTCCTTAAAACTTCTTTGTCTAAAGGGT +
Preference number: 5 (lower is better)
Translates to: VSDQRKIQIWSSLGT*LSEMHSLKLLCLKG
Trigger: ACCCTTTAGACAAAGAAGTTTTAAGGAATGCATCTCTGAGAGCCAAGTGCCAAGGCTACTCCATATTTGTATTTTCCTTTGGTCCGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CAAACTGTTTTTACTCAAGGGTCTAATTTGAGATGTAGATGTGATGGCGATCATCGAGAACGCTGTCATTaGACTTTCCATCAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: QTVFTQGSNLRCRCDGDHRERCH*TFHQSA
Trigger: TGCTGACTGATGGAAAGTCAAATGACAGCGTTCTCG...ATGATCGCCATCACATCTACATCTCAAATTAGACCCTTGAGTAAAAACAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS TCA 90 bp ACAAAGGAAAATCACATCAGCTTCCGGAAGGTTACAAGTCTCTTGTaGATTATTACACAGAGTCTCTTGCAGAGGCAGGTAAATATCTCT +
Preference number: 5 (lower is better)
Translates to: TKENHISFRKVTSLL*IITQSLLQRQVNIS
Trigger: AGAGATATTTACCTGCCTCTGCAAGAGACTCTGTGTAATAATTCACAAGAGACTTGTAACCTTCCGGAAGCTGATGTGATTTTCCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 90 bp CGAGTATATAAAGGGCTTCAGAAATTTCACAATATAATTCAGATCTaGCTTGTACATTCTCCCAAGCTGTATCAGATGGTGATCGAGTGG +
Preference number: 5 (lower is better)
Translates to: RVYKGLQKFHNIIQI*LVHSPKLYQMVIEW
Trigger: CCACTCGATCACCATCTGATACAGCTTGGGAGAATGTACAAGCCAGATCTGAATTATATTGTGAAATTTCTGAAGCCCTTTATATACTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp CTACTGCTTTGTCTTGTCCTGTATGTGTGTTTCCTAAGTAGGTTTAATGTGCTTTCTTTGTCTAAAGGGTaGGTTTCACCTGCAGTTACT +
Preference number: 5 (lower is better)
Translates to: LLLCLVLYVCFLSRFNVLSLSKG*VSPAVT
Trigger: AGTAACTGCAGGTGAAACCAACCCTTTAGACAAAGA...AAGCACATTAAACCTACTTAGGAAACACACATACAGGACAAGACAAAGCAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS-3UTR CAA 90 bp TGTTTTGATACACTGTTTGAGAATAGCTCTGTTTCCAGGTTCACATGTTGGCATGAGATGATGCTTCATTaGATGTACAGTGTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: CFDTLFENSSVSRFTCWHEMMLH*MYSVVS
Trigger: ACTTACAACACTGTACATCAAATGAAGCATCATCTC...ATGCCAACATGTGAACCTGGAAACAGAGCTATTCTCAAACAGTGTATCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS GCA 72 bp ATCCTTTGGGTCCAGGTCCCCCAGGAATTCCAGGATTaGCAGCGTCACCCTTCTGCCCTGGGTCCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: ILWVQVPQEFQD*QRHPSALGPQG
Trigger: TCCCTGGGGACCCAGGGCAGAAGGGTGACGCTGGCAATCCTGGAATTCCTGGGGGACCTGGACCCAAAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp TCATCTGATGCTCTGTGGGTGACCAGCACAGCAATCTaGGGGACGCCCTGGGCCTTCCTGCTGCCACTGGAC +
Preference number: 6 (lower is better)
Translates to: SSDALWVTSTAI*GTPWAFLLPLD
Trigger: GTCCAGTGGCAGCAGGAAGGCCCAGGGCGTCCCCCAGATTGCTGTGCTGGTCACCCACAGAGCATCAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp AGTGCAGCCTCCCGCACCATGTCATCTGATGCTCTGTaGGTGACCAGCACAGCAATCTGGGGGACGCCCTGG +
Preference number: 6 (lower is better)
Translates to: SAASRTMSSDAL*VTSTAIWGTPW
Trigger: CCAGGGCGTCCCCCAGATTGCTGTGCTGGTCACCCACAGAGCATCAGATGACATGGTGCGGGAGGCTGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp ACCACGTCTGCGTACTCGGGGCCTGGCCCTGGGCTCTaGTCTGCCAGGGTTTCAGTCCAGAGGATTAAGACA +
Preference number: 6 (lower is better)
Translates to: TTSAYSGPGPGL*SARVSVQRIKT
Trigger: TGTCTTAATCCTCTGGACTGAAACCCTGGCAGACCAGAGCCCAGGGCCAGGCCCCGAGTACGCAGACGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp CACCTTAAAGGCCAGGCTCACCTGCGCCTCTGCACCTaGACCACAGCTCACCCCTCTGATAGAGGTGATGTC +
Preference number: 6 (lower is better)
Translates to: HLKGQAHLRLCT*TTAHPSDRGDV
Trigger: GACATCACCTCTATCAGAGGGGTGAGCTGTGGTGCAGGTGCAGAGGCGCAGGTGAGCCTGGCCTTTAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp AGGAATTCCAGGATTGCCAGCGTCACCCTTCTGCCCTaGGTCCCCAGGGAATCCTGTTGGGCCCTTAACTCC +
Preference number: 6 (lower is better)
Translates to: RNSRIASVTLLP*VPRESCWALNS
Trigger: GGAGTTAAGGGCCCAACAGGATTCCCTGGGGACCCAGGGCAGAAGGGTGACGCTGGCAATCCTGGAATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TGCTGTGCCTTTAGGACCTCTCCGACCAGGAGGGCCTaGAGACCCCTGAAGTCCACTCCTGCCTTTCAAGCC +
Preference number: 6 (lower is better)
Translates to: CCAFRTSPTRRA*RPLKSTPAFQA
Trigger: GGCTTGAAAGGCAGGAGTGGACTTCAGGGGTCTCAAGGCCCTCCTGGTCGGAGAGGTCCTAAAGGCACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp CTTTTGACCTCGAGTCCCCGGGCATCCCACGACTCCTCTGTCTCCTaGAAGCCCAATTTCTCCTCGTCTTCCAGGGTCTCCGTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LLTSSPRASHDSSVS*KPNFSSSSRVSVLS
Trigger: GGAGAGGACGGAGACCCTGGAAGACGAGGAGAAATTGGGCTTCAAGGAGACAGAGGAGTCGTGGGATGCCCGGGGACTCGAGGTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp AGGTTGCCCTGCTGTGCCTTTAGGACCTCTCCGACCAGGAGGGCCTaGAGACCCCTGAAGTCCACTCCTGCCTTTCAAGCCTTGAGAGAG +
Preference number: 6 (lower is better)
Translates to: RLPCCAFRTSPTRRA*RPLKSTPAFQALRE
Trigger: CTCTCTCAAGGCTTGAAAGGCAGGAGTGGACTTCAGGGGTCTCAAGGCCCTCCTGGTCGGAGAGGTCCTAAAGGCACAGCAGGGCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp GACTGGTTGGCGCTTGACCTCAGGGAAGAAATAGTCTaGGCCCTGTCGCTGAAGCTCATCAGCCCAAGCCGC +
Preference number: 6 (lower is better)
Translates to: DWLALDLREEIV*ALSLKLISPSR
Trigger: GCGGCTTGGGCTGATGAGCTTCAGCGACAGGGCTCAGACTATTTCTTCCCTGAGGTCAAGCGCCAACCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp TGTGAGCCTTGTAGTCCTTCAGGTCCTTGTGTACCTTaGGGTCCTGGGTTTCCTGCCTGCCCTGAGGGACCC +
Preference number: 6 (lower is better)
Translates to: CEPCSPSGPCVP*GPGFPACPEGP
Trigger: GGGTCCCTCAGGGCAGGCAGGAAACCCAGGACCTCAAGGTACACAAGGACCTGAAGGACTACAAGGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp ACTGTTCACCTTAAAGGCCAGGCTCACCTGCGCCTCTaGACCTGCACCACAGCTCACCCCTCTGATAGAGGT +
Preference number: 6 (lower is better)
Translates to: TVHLKGQAHLRL*TCTTAHPSDRG
Trigger: ACCTCTATCAGAGGGGTGAGCTGTGGTGCAGGTGCAGAGGCGCAGGTGAGCCTGGCCTTTAAGGTGAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp CAATCTGGGGGACGCCCTGGGCCTTCCTGCTGCCACTaGACTCTGAGAAGCCTTCTTTCCTCATCTGCTCAA +
Preference number: 6 (lower is better)
Translates to: QSGGRPGPSCCH*TLRSLLSSSAQ
Trigger: TTGAGCAGATGAGGAAAGAAGGCTTCTCAGAGTCCAGTGGCAGCAGGAAGGCCCAGGGCGTCCCCCAGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp TCTGACTGCCGCTCCAGCAAGGTGATGCTTTCACCCTaGAGACCGTCTGAGAAGATGAGCAGAACCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SDCRSSKVMLSP*RPSEKMSRTWP
Trigger: GGGCCAGGTTCTGCTCATCTTCTCAGACGGTCTCCAGGGTGAAAGCATCACCTTGCTGGAGCGGCAGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp CTTCTCGCCATCTTCCCCAGCAGCGCCTCTGATGCCTaGGTAACCCTGATTGCCAGGGTCACCTTTTTGTCC +
Preference number: 6 (lower is better)
Translates to: LLAIFPSSASDA*VTLIARVTFLS
Trigger: GGACAAAAAGGTGACCCTGGCAATCAGGGTTACCCAGGCATCAGAGGCGCTGCTGGGGAAGATGGCGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp CCTCGTTCTCCTTTCTCGCCCTTCTGGCCTTTGATGTaGCTGTCTTTTCCTGGGTCACCGGGATCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: PRSPFSPFWPLM*LSFPGSPGSPG
Trigger: CCCAGGGGATCCCGGTGACCCAGGAAAAGACAGCAACATCAAAGGCCAGAAGGGCGAGAAAGGAGAACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp GCCACTCTCCTGGTGTTGGTTCCCGCAGACATCCGCTTGAAAACGTaGCGGGCCACAAACCTCATTGCATTGCCAATGTCCCTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: ATLLVLVPADIRLKT*RATNLIALPMSLAF
Trigger: GAAGGCCAGGGACATTGGCAATGCAATGAGGTTTGTGGCCCGCAACGTTTTCAAGCGGATGTCTGCGGGAACCAACACCAGGAGAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp CTGGCTGCCTGGCCATTGCTGAAAAACACAGCCACTCTCCTGGTGTaGGTTCCCGCAGACATCCGCTTGAAAACGTTGCGGGCCACAAAC +
Preference number: 6 (lower is better)
Translates to: LAAWPLLKNTATLLV*VPADIRLKTLRATN
Trigger: GTTTGTGGCCCGCAACGTTTTCAAGCGGATGTCTGCGGGAACCAACACCAGGAGAGTGGCTGTGTTTTTCAGCAATGGCCAGGCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp TCACGTTCTGCGTCAGGCGGCTGCCATGCTCTTCTGTaGACAGGACGTTGGAATGCTGAAGAGCCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: SRSASGGCHALL*TGRWNAEEPWQ
Trigger: CTGCCAAGGCTCTTCAGCATTCCAACGTCCTGTTCACAGAAGAGCATGGCAGCCGCCTGACGCAGAACGTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp GTCCAGCCCGTCCTCTCCATGTTCCCCCTGAGCTCCTaGAAATCCTTTGACTCCCTTTTGACCTCGAGTCCC +
Preference number: 6 (lower is better)
Translates to: VQPVLSMFPLSS*KSFDSLLTSSP
Trigger: GGGACTCGAGGTCAAAAGGGAGTCAAAGGATTTTCAGGAGCTCAGGGGGAACATGGAGAGGACGGGCTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp ATGGTAGTCAGAGCCACGGATGAGATAGCTGGTGTCTaGGTCATAGGAGACCACGGCAACCCGTGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: MVVRATDEIAGV*VIGDHGNPCSH
Trigger: GTGGGAGCACGGGTTGCCGTGGTCTCCTATGACTCAGACACCAGCTATCTCATCCGTGGCTCTGACTACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp CCATCCGTGATGACAATCATCAGCTGCCTCACGTTCTaGGTCAGGCGGCTGCCATGCTCTTCTGTGAACAGG +
Preference number: 6 (lower is better)
Translates to: PSVMTIISCLTF*VRRLPCSSVNR
Trigger: CCTGTTCACAGAAGAGCATGGCAGCCGCCTGACGCAGAACGTGAGGCAGCTGATGATTGTCATCACGGATGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp CATCCGCTTGAAAACGTTGCGGGCCACAAACCTCATTaGATTGCCAATGTCCCTGGCCTTCCGGGGCACTTG +
Preference number: 6 (lower is better)
Translates to: HPLENVAGHKPH*IANVPGLPGHL
Trigger: CAAGTGCCCCGGAAGGCCAGGGACATTGGCAATGCAATGAGGTTTGTGGCCCGCAACGTTTTCAAGCGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp CTCCATGGTGGCCGTGAGGATGGATGCTCTACTGGCTaGCTGGCCATTGCTGAAAAACACAGCCACTCTCCT +
Preference number: 6 (lower is better)
Translates to: LHGGREDGCSTG*LAIAEKHSHSP
Trigger: AGGAGAGTGGCTGTGTTTTTCAGCAATGGCCAGGCAGCCAGTAGAGCATCCATCCTCACGGCCACCATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp GAGGGCACTCAACTCCATGGTGGCCGTGAGGATGGATaGTCTACTGGCTGCCTGGCCATTGCTGAAAAACAC +
Preference number: 6 (lower is better)
Translates to: EGTQLHGGREDG*STGCLAIAEKH
Trigger: GTGTTTTTCAGCAATGGCCAGGCAGCCAGTAGAGCATCCATCCTCACGGCCACCATGGAGTTGAGTGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp GATGGCCCTGGAACAAAGGCTGGCCCTGACGGTGAGTaGAAATGTCGAACCCGACCACTACATCCACAAAGC +
Preference number: 6 (lower is better)
Translates to: DGPGTKAGPDGE*KCRTRPLHPQS
Trigger: GCTTTGTGGATGTAGTGGTCGGGTTCGACATTTCCACTCACCGTCAGGGCCAGCCTTTGTTCCAGGGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp ATGGTGGCCGTGAGGATGGATGCTCTACTGGCTGCCTaGCCATTGCTGAAAAACACAGCCACTCTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: MVAVRMDALLAA*PLLKNTATLLV
Trigger: CACCAGGAGAGTGGCTGTGTTTTTCAGCAATGGCCAGGCAGCCAGTAGAGCATCCATCCTCACGGCCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp GTAGACTGGGCACTCTTCAGTGTTTGGCAGATAGCCTaGGGGAGAGTAGGTCAGGACAGCCACTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: VDWALFSVWQIA*GRVGQDSHSVS
Trigger: GGAGACAGAGTGGCTGTCCTGACCTACTCTCCCCCAGGCTATCTGCCAAACACTGAAGAGTGCCCAGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp GTCTTCCTCGTTCTCCTTTCTCGCCCTTCTGGCCTTTaGTGTTGCTGTCTTTTCCTGGGTCACCGGGATCCC +
Preference number: 6 (lower is better)
Translates to: VFLVLLSRPSGL*CCCLFLGHRDP
Trigger: GGGATCCCGGTGACCCAGGAAAAGACAGCAACATCAAAGGCCAGAAGGGCGAGAAAGGAGAACGAGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CCACTCTCCTGGTGTTGGTTCCCGCAGACATCCGCTTaGAAACGTTGCGGGCCACAAACCTCATTGCATTGC +
Preference number: 6 (lower is better)
Translates to: PLSWCWFPQTSA*KRCGPQTSLHC
Trigger: GCAATGCAATGAGGTTTGTGGCCCGCAACGTTTTCAAGCGGATGTCTGCGGGAACCAACACCAGGAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp TGTCTTCTGTGCCAGCATTCTCTGGGCCAGGGAAGGTaGGATTATCACACTTGGCTTGCAGGTCTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: CLLCQHSLGQGR*DYHTWLAGLCR
Trigger: CCGGCAGAGACCTGCAAGCCAAGTGTGATAATCTCACCTTCCCTGGCCCAGAGAATGCTGGCACAGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp CTGCCACTGGACTCTGAGAAGCCTTCTTTCCTCATCTaGTCAATGGCGGCCCCAACATTAGATGCCCCAGTC +
Preference number: 6 (lower is better)
Translates to: LPLDSEKPSFLI*SMAAPTLDAPV
Trigger: GACTGGGGCATCTAATGTTGGGGCCGCCATTGAGCAGATGAGGAAAGAAGGCTTCTCAGAGTCCAGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp GTCCTTCCCAGCAATCTGCCGCAGCTGTGTTTTGTTTaGCTCGCCAATCCCGATGGCGTGAATGGTGATCTG +
Preference number: 6 (lower is better)
Translates to: VLPSNLPQLCFV*LANPDGVNGDL
Trigger: CAGATCACCATTCACGCCATCGGGATTGGCGAGGCAAACAAAACACAGCTGCGGCAGATTGCTGGGAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp TGCCCGAAGTTAACCCTTTCGTCCTTCCCAGCAATCTaGCGCAGCTGTGTTTTGTTTGCCTCGCCAATCCCG +
Preference number: 6 (lower is better)
Translates to: CPKLTLSSFPAI*RSCVLFASPIP
Trigger: CGGGATTGGCGAGGCAAACAAAACACAGCTGCGGCAGATTGCTGGGAAGGACGAAAGGGTTAACTTCGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp ATCTCGGGATGGTTGGAGTATGTGAGCGCTCCAATCTaGACTCGGTCCCTACCAACGTCTGCCTTCTTCACC +
Preference number: 6 (lower is better)
Translates to: ISGWLEYVSAPI*TRSLPTSAFFT
Trigger: GGTGAAGAAGGCAGACGTTGGTAGGGACCGAGTGCAGATTGGAGCGCTCACATACTCCAACCATCCCGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp AGAGCATCAAGTCCTGCTTCTCTGAGCCTGTCTGACTaGCGCTCCAGCAAGGTGATGCTTTCACCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: RASSPASLSLSD*RSSKVMLSPWR
Trigger: TCTCCAGGGTGAAAGCATCACCTTGCTGGAGCGGCAGTCAGACAGGCTCAGAGAAGCAGGACTTGATGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp GGGGCAGTGTGTCTCCCCTCTCTAACTCAACAAGTCTaGAGTCGTCCTTCAGCGTGGGTGGTGGGTATTGAT +
Preference number: 6 (lower is better)
Translates to: GAVCLPSLTQQV*SRPSAWVVGID
Trigger: ATCAATACCCACCACCCACGCTGAAGGACGACTGCAGACTTGTTGAGTTAGAGAGGGGAGACACACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp GCGCCGAAGCTTCTCCAGTGGCTCATAATCTCCAACTaGGGGGACTGGAATCACCTGAAATGTCCCAGTGTC +
Preference number: 6 (lower is better)
Translates to: APKLLQWLIISN*GDWNHLKCPSV
Trigger: GACACTGGGACATTTCAGGTGATTCCAGTCCCCCCAGTTGGAGATTATGAGCCACTGGAGAAGCTTCGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp GGATACACAGGGCACTTGTCTTTCCAACAGGGGCTGTaGTCCCTCAGGAACTGGATCAGTTCACAGGGGGAA +
Preference number: 6 (lower is better)
Translates to: GYTGHLSFQQGL*SLRNWISSQGE
Trigger: TTCCCCCTGTGAACTGATCCAGTTCCTGAGGGACCACAGCCCCTGTTGGAAAGACAAGTGCCCTGTGTATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS CAA 72 bp GCCACTCTCCTGGTGTTGGTTCCCGCAGACATCCGCTaGAAAACGTTGCGGGCCACAAACCTCATTGCATTG +
Preference number: 6 (lower is better)
Translates to: ATLLVLVPADIR*KTLRATNLIAL
Trigger: CAATGCAATGAGGTTTGTGGCCCGCAACGTTTTCAAGCGGATGTCTGCGGGAACCAACACCAGGAGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp TCCTTCTGGCAAGAGGTGGGAAAGGGAACTGTCTTATCAACGTGGTaGGCAGCTGTGGTTAGAGCTGCAGGTATGGTTGGGGCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: SFWQEVGKGTVLSTW*AAVVRAAGMVGAAG
Trigger: ACCTGCAGCCCCAACCATACCTGCAGCTCTAACCACAGCTGCCAACCACGTTGATAAGACAGTTCCCTTTCCCACCTCTTGCCAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp ACATCCACAGAGCTGGTGACATTCTCCAGGAAGTTCTaGAGGTCCCTCAGATTCTGTGTGGTCCCCACTGAC +
Preference number: 6 (lower is better)
Translates to: TSTELVTFSRKF*RSLRFCVVPTD
Trigger: GTCAGTGGGGACCACACAGAATCTGAGGGACCTGCAGAACTTCCTGGAGAATGTCACCAGCTCTGTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp GAGCGCTCCAATCTGCACTCGGTCCCTACCAACGTCTaGCTTCTTCACCAAGTGGATGGTGAGGTTCATCAT +
Preference number: 6 (lower is better)
Translates to: ERSNLHSVPTNV*LLHQVDGEVHH
Trigger: ATGATGAACCTCACCATCCACTTGGTGAAGAAGGCAGACGTTGGTAGGGACCGAGTGCAGATTGGAGCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp TTTCTGCGATGTTTCCCAGGTACTGTGAGAGCGTCTTaGCCAGGTCTAGCATCCCAATGGTCAGCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: FLRCFPGTVRAS*PGLASQWSAES
Trigger: GGACTCAGCTGACCATTGGGATGCTAGACCTGGGCAAGACGCTCTCACAGTACCTGGGAAACATCGCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp CTTCCTTTGGAGCTAGGACGGCCATGTGTCCCCTTCTaGCCAGTTATCCCTTGTCTTCCTCGTTCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: LPLELGRPCVPF*PVIPCLPRSPF
Trigger: GAAAGGAGAACGAGGAAGACAAGGGATAACTGGGCAGAAGGGGACACATGGCCGTCCTAGCTCCAAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp ACCATCAGTTCCCCGGAGGAGAGGAGCAGGTACAACTaGCGCATCAGATCAGCAGTGCTTTCTGAATGGTTG +
Preference number: 6 (lower is better)
Translates to: TISSPEERSRYN*RIRSAVLSEWL
Trigger: CAACCATTCAGAAAGCACTGCTGATCTGATGCGGCAGTTGTACCTGCTCCTCTCCTCCGGGGAACTGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp GGAACCTCACGCAGCTTAGCAGTCAATCTGAGGCCATaGGGCAGTGTGTCTCCCCTCTCTAACTCAACAAGT +
Preference number: 6 (lower is better)
Translates to: GTSRSLAVNLRP*GSVSPLSNSTS
Trigger: ACTTGTTGAGTTAGAGAGGGGAGACACACTGCCCCATGGCCTCAGATTGACTGCTAAGCTGCGTGAGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp CCTTCCCCCTCCTCCTTGTTTGCTGTTCACTGGAGCTaGGGTCTCTGCGGAACAAGGCTCTTCCTTATCATT +
Preference number: 6 (lower is better)
Translates to: PSPSSLFAVHWS*GLCGTRLFLII
Trigger: AATGATAAGGAAGAGCCTTGTTCCGCAGAGACCCCAGCTCCAGTGAACAGCAAACAAGGAGGAGGGGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165165.3
CDS CCA 72 bp ACCAGAGGACTGGTCCAGAGCAAAGACCAGCTCTGTTaGATACACAGGGCACTTGTCTTTCCAACAGGGGCT +
Preference number: 6 (lower is better)
Translates to: TRGLVQSKDQLC*IHRALVFPTGA
Trigger: AGCCCCTGTTGGAAAGACAAGTGCCCTGTGTATCCAACAGAGCTGGTCTTTGCTCTGGACCAGTCCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS CAA 72 bp CTGGTGTTGGTTCCCGCAGACATCCGCTTGAAAACGTaGCGGGCCACAAACCTCATTGCATTGCCAATGTCC +
Preference number: 6 (lower is better)
Translates to: LVLVPADIRLKT*RATNLIALPMS
Trigger: GGACATTGGCAATGCAATGAGGTTTGTGGCCCGCAACGTTTTCAAGCGGATGTCTGCGGGAACCAACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TGGCCATTGCTGAAAAACACAGCCACTCTCCTGGTGTaGGTTCCCGCAGACATCCGCTTGAAAACGTTGCGG +
Preference number: 6 (lower is better)
Translates to: WPLLKNTATLLV*VPADIRLKTLR
Trigger: CCGCAACGTTTTCAAGCGGATGTCTGCGGGAACCAACACCAGGAGAGTGGCTGTGTTTTTCAGCAATGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp GTCAAACGCTGCTTTCTGATAGATCTGGAACTTGGCTGGGAACTCTaGGTCACTGTTCACCTTAAAGGCCAGGCTCACCTGCGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: VKRCFLIDLELGWEL*VTVHLKGQAHLRLC
Trigger: GCAGAGGCGCAGGTGAGCCTGGCCTTTAAGGTGAACAGTGACCAAGAGTTCCCAGCCAAGTTCCAGATCTATCAGAAAGCAGCGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp TTTGGAGCTAGGACGGCCATGTGTCCCCTTCTGCCCAGTTATCCCTaGTCTTCCTCGTTCTCCTTTCTCGCCCTTCTGGCCTTTGATGTT +
Preference number: 6 (lower is better)
Translates to: FGARTAMCPLLPSYP*SSSFSFLALLAFDV
Trigger: AACATCAAAGGCCAGAAGGGCGAGAAAGGAGAACGAGGAAGACAAGGGATAACTGGGCAGAAGGGGACACATGGCCGTCCTAGCTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp GACTGGTCCAGAGCAAAGACCAGCTCTGTTGGATACACAGGGCACTaGTCTGTGAAATCACGGCTGTGGTCCCTCAGGAACTGGATCAGT +
Preference number: 6 (lower is better)
Translates to: DWSRAKTSSVGYTGH*SVKSRLWSLRNWIS
Trigger: ACTGATCCAGTTCCTGAGGGACCACAGCCGTGATTTCACAGACAAGTGCCCTGTGTATCCAACAGAGCTGGTCTTTGCTCTGGACCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165165.3
CDS TCA 72 bp GTTCTGCAGGTCCCTCAGATTCTGTGTGGTCCCCACTaGCTCATCCACCAAGAATATAAGGTCGGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: VLQVPQILCGPH*LIHQEYKVGKG
Trigger: TCCCTTGCCGACCTTATATTCTTGGTGGATGAGTCAGTGGGGACCACACAGAATCTGAGGGACCTGCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CCGCAGTCTGTTGGCAGGTTCGAGAACGCTGTCATTTaGCTTTCCATCAGTCAGCACGATGAGGTAACAGGG +
Preference number: 6 (lower is better)
Translates to: PQSVGRFENAVI*LSISQHDEVTG
Trigger: CCCTGTTACCTCATCGTGCTGACTGATGGAAAGTCAAATGACAGCGTTCTCGAACCTGCCAACAGACTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp TTCACCAAGTGGATGGTGAGGTTCATCATGCTTTCTTaGTCACGTGGACCTATGCTGCCTGAGTGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: FTKWMVRFIMLS*SRGPMLPEWSS
Trigger: GCTGGACCACTCAGGCAGCATAGGTCCACGTGAGCAAGAAAGCATGATGAACCTCACCATCCACTTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp AGGAACTGGATCAGTTCACAGGGGGAATATATAGGTTaGCCTGCTGTGCCTTTAGGACCTCTCCGACCAGGA +
Preference number: 6 (lower is better)
Translates to: RNWISSQGEYIG*PAVPLGPLRPG
Trigger: TCCTGGTCGGAGAGGTCCTAAAGGCACAGCAGGGCAACCTATATATTCCCCCTGTGAACTGATCCAGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp AAGAGGTGGGAAAGGGAACTGTCTTATCAACGTGGTTaGCAGCTGTGGTTAGAGCTGCAGGTATGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: KRWERELSYQRG*QLWLELQVWLG
Trigger: CCCCAACCATACCTGCAGCTCTAACCACAGCTGCCAACCACGTTGATAAGACAGTTCCCTTTCCCACCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp ACCAGAGGACTGGTCCAGAGCAAAGACCAGCTCTGTTaGATACACAGGGCACTTGTCTGTGAAATCACGGCT +
Preference number: 6 (lower is better)
Translates to: TRGLVQSKDQLC*IHRALVCEITA
Trigger: AGCCGTGATTTCACAGACAAGTGCCCTGTGTATCCAACAGAGCTGGTCTTTGCTCTGGACCAGTCCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165165.3
CDS CCA 72 bp TGCGGGCCACAAACCTCATTGCATTGCCAATGTCCCTaGCCTTCCGGGGCACTTGGTATTTTATCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: CGPQTSLHCQCP*PSGALGILSGK
Trigger: TTTCCCAGATAAAATACCAAGTGCCCCGGAAGGCCAGGGACATTGGCAATGCAATGAGGTTTGTGGCCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp CAAGAGGTGGGAAAGGGAACTGTCTTATCAACGTGGTaGGCAGCTGTGGTTAGAGCTGCAGGTATGGTTGGG +
Preference number: 6 (lower is better)
Translates to: QEVGKGTVLSTW*AAVVRAAGMVG
Trigger: CCCAACCATACCTGCAGCTCTAACCACAGCTGCCAACCACGTTGATAAGACAGTTCCCTTTCCCACCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TTGAGACCCCTGAAGTCCACTCCTGCCTTTCAAGCCTaGAGAGAGAGTCAGTCCCTTGAATCCTTTGGGTCC +
Preference number: 6 (lower is better)
Translates to: LRPLKSTPAFQA*RESQSLESFGS
Trigger: GGACCCAAAGGATTCAAGGGACTGACTCTCTCTCAAGGCTTGAAAGGCAGGAGTGGACTTCAGGGGTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp AGAGCAAAGACCAGCTCTGTTGGATACACAGGGCACTaGTCTGTGAAATCACGGCTGTGGTCCCTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RAKTSSVGYTGH*SVKSRLWSLRN
Trigger: GTTCCTGAGGGACCACAGCCGTGATTTCACAGACAAGTGCCCTGTGTATCCAACAGAGCTGGTCTTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165165.3
CDS CAA 72 bp AATCGAATTCCAGGTAGACTGGGCACTCTTCAGTGTTaGGCAGATAGCCTGGGGGAGAGTAGGTCAGGACAG +
Preference number: 6 (lower is better)
Translates to: NRIPGRLGTLQC*ADSLGESRSGQ
Trigger: CTGTCCTGACCTACTCTCCCCCAGGCTATCTGCCAAACACTGAAGAGTGCCCAGTCTACCTGGAATTCGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp CTCTGGGCCAGGGAAGGTGAGATTATCACACTTGGCTaGCAGGTCTCTGCCGGGATATTTGTTGATAGCACG +
Preference number: 6 (lower is better)
Translates to: LWAREGEIITLG*QVSAGIFVDST
Trigger: CGTGCTATCAACAAATATCCCGGCAGAGACCTGCAAGCCAAGTGTGATAATCTCACCTTCCCTGGCCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp TCTTGGTTGGCATTTCCTACACCCACTGCAAAGATGGTGATGCCTTaGTCTCTGAGTTCCCGTGCTGCCTCGTCGAGTTTATCTCGGTCG +
Preference number: 6 (lower is better)
Translates to: SWLAFPTPTAKMVMP*SLSSRAASSSLSRS
Trigger: CGACCGAGATAAACTCGACGAGGCAGCACGGGAACTCAGAGACAAAGGCATCACCATCTTTGCAGTGGGTGTAGGAAATGCCAACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp AAAAACACAGCCACTCTCCTGGTGTTGGTTCCCGCAGACATCCGCTaGAAAACGTTGCGGGCCACAAACCTCATTGCATTGCCAATGTCC +
Preference number: 6 (lower is better)
Translates to: KNTATLLVLVPADIR*KTLRATNLIALPMS
Trigger: GGACATTGGCAATGCAATGAGGTTTGTGGCCCGCAACGTTTTCAAGCGGATGTCTGCGGGAACCAACACCAGGAGAGTGGCTGTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp GCCAGCATTCTCTGGGCCAGGGAAGGTGAGATTATCACACTTGGCTaGCAGGTCTCTGCCGGGATATTTGTTGATAGCACGTCTGATCGA +
Preference number: 6 (lower is better)
Translates to: ASILWAREGEIITLG*QVSAGIFVDSTSDR
Trigger: TCGATCAGACGTGCTATCAACAAATATCCCGGCAGAGACCTGCAAGCCAAGTGTGATAATCTCACCTTCCCTGGCCCAGAGAATGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp TCTGTGCCAGCATTCTCTGGGCCAGGGAAGGTGAGATTATCACACTaGGCTTGCAGGTCTCTGCCGGGATATTTGTTGATAGCACGTCTG +
Preference number: 6 (lower is better)
Translates to: SVPAFSGPGKVRLSH*ACRSLPGYLLIARL
Trigger: CAGACGTGCTATCAACAAATATCCCGGCAGAGACCTGCAAGCCAAGTGTGATAATCTCACCTTCCCTGGCCCAGAGAATGCTGGCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp ACCACGGCAACCCGTGCTCCCACGGGACAGTTGTTCTCCCTGATGTaGAGGTCACTGACAATTGAAGTGATGGTGTCCCTTGTTTCATTA +
Preference number: 6 (lower is better)
Translates to: TTATRAPTGQLFSLM*RSLTIEVMVSLVSL
Trigger: TAATGAAACAAGGGACACCATCACTTCAATTGTCAGTGACCTCAACATCAGGGAGAACAACTGTCCCGTGGGAGCACGGGTTGCCGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CCCTACCAACGTCTGCCTTCTTCACCAAGTGGATGGTaGGGTTCATCATGCTTTCTTGCTCACGTGGACCTA +
Preference number: 6 (lower is better)
Translates to: PYQRLPSSPSGW*GSSCFLAHVDL
Trigger: TAGGTCCACGTGAGCAAGAAAGCATGATGAACCTCACCATCCACTTGGTGAAGAAGGCAGACGTTGGTAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp AGAACGGTGCATCCAGATGAGTTGGTCCACGGACTGTaGCGTGCAACAAGCTGTCAAACGCTGCTTTCTGAT +
Preference number: 6 (lower is better)
Translates to: RTVHPDELVHGL*RATSCQTLLSD
Trigger: ATCAGAAAGCAGCGTTTGACAGCTTGTTGCACGTCACAGTCCGTGGACCAACTCATCTGGATGCACCGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CATTCTCTCCTGCCTCGATTCTGTACACCTCGGGGATaGGTAATGCACTGTCTTCTGTGCCAGCATTCTCTG +
Preference number: 6 (lower is better)
Translates to: HSLLPRFCTPRG*VMHCLLCQHSL
Trigger: CAGAGAATGCTGGCACAGAAGACAGTGCATTACTCATCCCCGAGGTGTACAGAATCGAGGCAGGAGAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp TTAGATGCCCCAGTCTGGAGAGAGAGTTTCTGGATTTaGTGCTGGAATTCAGACTGGTTGGCGCTTGACCTC +
Preference number: 6 (lower is better)
Translates to: LDAPVWRESFWI*CWNSDWLALDL
Trigger: GAGGTCAAGCGCCAACCAGTCTGAATTCCAGCAGCAAATCCAGAAACTCTCTCTCCAGACTGGGGCATCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp TTTCCTCATCTGCTCAATGGCGGCCCCAACATTAGATaGCCCAGTCTGGAGAGAGAGTTTCTGGATTTGCTG +
Preference number: 6 (lower is better)
Translates to: FPHLLNGGPNIR*PSLEREFLDLL
Trigger: CAGCAAATCCAGAAACTCTCTCTCCAGACTGGGGCATCTAATGTTGGGGCCGCCATTGAGCAGATGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp TCCACGGACTGTGACGTGCAACAAGCTGTCAAACGCTaGTTTCTGATAGATCTGGAACTTGGCTGGGAACTC +
Preference number: 6 (lower is better)
Translates to: STDCDVQQAVKR*FLIDLELGWEL
Trigger: GAGTTCCCAGCCAAGTTCCAGATCTATCAGAAAGCAGCGTTTGACAGCTTGTTGCACGTCACAGTCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp TCTGGGCCAGGGAAGGTGAGATTATCACACTTGGCTTaGAGGTCTCTGCCGGGATATTTGTTGATAGCACGT +
Preference number: 6 (lower is better)
Translates to: SGPGKVRLSHLA*RSLPGYLLIAR
Trigger: ACGTGCTATCAACAAATATCCCGGCAGAGACCTGCAAGCCAAGTGTGATAATCTCACCTTCCCTGGCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp AGAGGAGCAGGTACAACTGCCGCATCAGATCAGCAGTaGTTTCTGAATGGTTGCCATGACTGTTCCCTAGGA +
Preference number: 6 (lower is better)
Translates to: RGAGTTAASDQQ*FLNGCHDCSLG
Trigger: TCCTAGGGAACAGTCATGGCAACCATTCAGAAAGCACTGCTGATCTGATGCGGCAGTTGTACCTGCTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp TGCTCAATGGCGGCCCCAACATTAGATGCCCCAGTCTaGAGAGAGAGTTTCTGGATTTGCTGCTGGAATTCA +
Preference number: 6 (lower is better)
Translates to: CSMAAPTLDAPV*RESFWICCWNS
Trigger: TGAATTCCAGCAGCAAATCCAGAAACTCTCTCTCCAGACTGGGGCATCTAATGTTGGGGCCGCCATTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp ACTCGGTCCCTACCAACGTCTGCCTTCTTCACCAAGTaGATGGTGAGGTTCATCATGCTTTCTTGCTCACGT +
Preference number: 6 (lower is better)
Translates to: TRSLPTSAFFTK*MVRFIMLSCSR
Trigger: ACGTGAGCAAGAAAGCATGATGAACCTCACCATCCACTTGGTGAAGAAGGCAGACGTTGGTAGGGACCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp TTGTCTTTCCAACAGGGGCTGTGGTCCCTCAGGAACTaGATCAGTTCACAGGGGGAATATATAGGTTGCCCT +
Preference number: 6 (lower is better)
Translates to: LSFQQGLWSLRN*ISSQGEYIGCP
Trigger: AGGGCAACCTATATATTCCCCCTGTGAACTGATCCAGTTCCTGAGGGACCACAGCCCCTGTTGGAAAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS CCA 72 bp TCATCTTGCATCTTCGCCATCTTGTTTGCTGTTCACTaGAGCTGGGGTCTCTGCGGAACAAGGCTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: SSCIFAILFAVH*SWGLCGTRLFL
Trigger: AAGGAAGAGCCTTGTTCCGCAGAGACCCCAGCTCCAGTGAACAGCAAACAAGATGGCGAAGATGCAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190193.8
CDS CAA 90 bp TGTGTACCCGGCCAAGCCGGACTAAGTGATGATCCAGAGGGTGGCTaGCTAATTCTTCTAACTCCATGTCATTGTGTATCGGACCAAAGG +
Preference number: 6 (lower is better)
Translates to: CVPGQAGLSDDPEGG*LILLTPCHCVSDQR
Trigger: CCTTTGGTCCGATACACAATGACATGGAGTTAGAAGAATTAGCAAGCCACCCTCTGGATCATCACTTAGTCCGGCTTGGCCGGGTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CCTGGATGCAGATCTTTCCTCAAACATGTCCCAAAGTaGCTGCAAGAACGGTGCATCCAGATGAGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: PGCRSFLKHVPK*LQERCIQMSWS
Trigger: GGACCAACTCATCTGGATGCACCGTTCTTGCAGTCACTTTGGGACATGTTTGAGGAAAGATCTGCATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CAAATGGTCGCCTCTGTGATCCTCCAACACAAAAGATaGGTCTTTCCCAGCGTTCAGCTCTTGATCAGCCAG +
Preference number: 6 (lower is better)
Translates to: QMVASVILQHKR*VFPSVQLLISQ
Trigger: CTGGCTGATCAAGAGCTGAACGCTGGGAAAGACTCATCTTTTGTGTTGGAGGATCACAGAGGCGACCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp GGTTCATCATGCTTTCTTGCTCACGTGGACCTATGCTaGCTGAGTGGTCCAGCACAAACACGATGTCTAAGA +
Preference number: 6 (lower is better)
Translates to: GSSCFLAHVDLC*LSGPAQTRCLR
Trigger: TCTTAGACATCGTGTTTGTGCTGGACCACTCAGGCAGCATAGGTCCACGTGAGCAAGAAAGCATGATGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp TATAAACATCCCCTATGCCCAAAGCCAGGACACAGATaGCAAGGTCTTTCAGGACCTTTACCGCGTCTGTCA +
Preference number: 6 (lower is better)
Translates to: YKHPLCPKPGHR*QGLSGPLPRLS
Trigger: TGACAGACGCGGTAAAGGTCCTGAAAGACCTTGGCATCTGTGTCCTGGCTTTGGGCATAGGGGATGTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp CTGTCAATCACTGAGCTCACCAGCGCTTTCACGGCTTaGAAGTCATCGCTGGCGATGTTTTTGGAATTGTCT +
Preference number: 6 (lower is better)
Translates to: LSITELTSAFTA*KSSLAMFLELS
Trigger: AGACAATTCCAAAAACATCGCCAGCGATGACTTCCAAGCCGTGAAAGCGCTGGTGAGCTCAGTGATTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TGCTTTCTGATAGATCTGGAACTTGGCTGGGAACTCTaGGTCACTGTTCACCTTAAAGGCCAGGCTCACCTG +
Preference number: 6 (lower is better)
Translates to: CFLIDLELGWEL*VTVHLKGQAHL
Trigger: CAGGTGAGCCTGGCCTTTAAGGTGAACAGTGACCAAGAGTTCCCAGCCAAGTTCCAGATCTATCAGAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp GACTTCCTTTGTCTCCTTTCCCTCCACGATTTCCACTaGATCCCTGTGAGCCTTGTAGTCCTTCAGGTCCTT +
Preference number: 6 (lower is better)
Translates to: DFLCLLSLHDFH*IPVSLVVLQVL
Trigger: AAGGACCTGAAGGACTACAAGGCTCACAGGGATCAAGTGGAAATCGTGGAGGGAAAGGAGACAAAGGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp AAGTCTGCAGTCGTCCTTCAGCGTGGGTGGTGGGTATaGATTAAATCCGCGTCTGACCGAGTATATAAAGGG +
Preference number: 6 (lower is better)
Translates to: KSAVVLQRGWWV*IKSASDRVYKG
Trigger: CCCTTTATATACTCGGTCAGACGCGGATTTAATCAATACCCACCACCCACGCTGAAGGACGACTGCAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp GCATTCTCTGGGCCAGGGAAGGTGAGATTATCACACTaGGCTTGCAGGTCTCTGCCGGGATATTTGTTGATA +
Preference number: 6 (lower is better)
Translates to: AFSGPGKVRLSH*ACRSLPGYLLI
Trigger: TATCAACAAATATCCCGGCAGAGACCTGCAAGCCAAGTGTGATAATCTCACCTTCCCTGGCCCAGAGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp GTCGGCCTCCTTTGTATCCACACAGCCGGTTTTATCCAGCTCCATTaGTTCAGCACGAGTAGAAACTTGGGTCCAGATTTCATTGCGGAT +
Preference number: 6 (lower is better)
Translates to: VGLLCIHTAGFIQLH*FSTSRNLGPDFIAD
Trigger: ATCCGCAATGAAATCTGGACCCAAGTTTCTACTCGTGCTGAACAAATGGAGCTGGATAAAACCGGCTGTGTGGATACAAAGGAGGCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp AACACAAAAGATGAGTCTTTCCCAGCGTTCAGCTCTTaGTCAGCCAGGCTGATTGTGCTCTCAGGAACCTCA +
Preference number: 6 (lower is better)
Translates to: NTKDESFPAFSS*SARLIVLSGTS
Trigger: TGAGGTTCCTGAGAGCACAATCAGCCTGGCTGATCAAGAGCTGAACGCTGGGAAAGACTCATCTTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp CACAGGTGTTTGGAAAACACTTGTCATAGCAAAGTGTaGAGCGCCGAAGCTTCTCCAGTGGCTCATAATCTC +
Preference number: 6 (lower is better)
Translates to: HRCLENTCHSKV*SAEASPVAHNL
Trigger: GAGATTATGAGCCACTGGAGAAGCTTCGGCGCTGCACACTTTGCTATGACAAGTGTTTTCCAAACACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp GCCATGACTTTCATGTTCAGAAGTGAGACTCGCCATTaGTACAGATTCCCGGTCATTTCCATAGTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: AMTFMFRSETRH*YRFPVISIVAH
Trigger: GTGAGCCACTATGGAAATGACCGGGAATCTGTAGCAATGGCGAGTCTCACTTCTGAACATGAAAGTCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp GTCAAACGCTGCTTTCTGATAGATCTGGAACTTGGCTaGGAACTCTTGGTCACTGTTCACCTTAAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: VKRCFLIDLELG*ELLVTVHLKGQ
Trigger: CTGGCCTTTAAGGTGAACAGTGACCAAGAGTTCCCAGCCAAGTTCCAGATCTATCAGAAAGCAGCGTTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp ATGTCCCTGGCCTTCCGGGGCACTTGGTATTTTATCTaGGAAAGAAGCTGTAGGAGATGCTTCTTGTTATGG +
Preference number: 6 (lower is better)
Translates to: MSLAFRGTWYFI*ERSCRRCFLLW
Trigger: CCATAACAAGAAGCATCTCCTACAGCTTCTTTCCCAGATAAAATACCAAGTGCCCCGGAAGGCCAGGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TTCCCTGTTATAGTCACTGAATTGAACAACACCGACTaGGGATCTGTCGGCGCCAATCTGAATCTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: FPVIVTELNNTD*GSVGANLNLPH
Trigger: GTGGGGAAGATTCAGATTGGCGCCGACAGATCCCAAGTCGGTGTTGTTCAATTCAGTGACTATAACAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TCTTTCTTCCCTGCCATGGTCTCCAGTTCATCTTGGTaGGCATTTCCTACACCCACTGCAAAGATGGTGATG +
Preference number: 6 (lower is better)
Translates to: SFFPAMVSSSSW*AFPTPTAKMVM
Trigger: CATCACCATCTTTGCAGTGGGTGTAGGAAATGCCAACCAAGATGAACTGGAGACCATGGCAGGGAAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp GAAATGTCGAACCCGACCACTACATCCACAAAGCAATaGGCTTTCCCACAGCTCTGGCAAATTTCACGAACC +
Preference number: 6 (lower is better)
Translates to: EMSNPTTTSTKQ*AFPQLWQISRT
Trigger: GGTTCGTGAAATTTGCCAGAGCTGTGGGAAAGCCAATTGCTTTGTGGATGTAGTGGTCGGGTTCGACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp AGTGGCTCACTAACTTATGTGGCTCTAGCATCTGGCTaGGAACGTAAACCAAATGGTCGCCTCTGTGATCCT +
Preference number: 6 (lower is better)
Translates to: SGSLTYVALASG*ERKPNGRLCDP
Trigger: AGGATCACAGAGGCGACCATTTGGTTTACGTTCCAAGCCAGATGCTAGAGCCACATAAGTTAGTGAGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp GGCCAAGCCGGACTAAGTGATGATCCAGAGGGTGGCTaGCTAATTCTTCTAACTCCATGTCATTGTGTATCG +
Preference number: 6 (lower is better)
Translates to: GQAGLSDDPEGG*LILLTPCHCVS
Trigger: CGATACACAATGACATGGAGTTAGAAGAATTAGCAAGCCACCCTCTGGATCATCACTTAGTCCGGCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp ACAGCCGGTTTTATCCAGCTCCATTTGTTCAGCACGAGTAGAAACTaGGGTCCAGATTTCATTGCGGATCTTCTTCAGGAAGTTCCCACT +
Preference number: 6 (lower is better)
Translates to: TAGFIQLHLFSTSRN*GPDFIADLLQEVPT
Trigger: AGTGGGAACTTCCTGAAGAAGATCCGCAATGAAATCTGGACCCAAGTTTCTACTCGTGCTGAACAAATGGAGCTGGATAAAACCGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp CATTTCCATAGTGGCTCACTAACTTATGTGGCTCTAGCATCTGGCTaGGAACGTAAACCAAATGGTCGCCTCTGTGATCCTCCAACACAA +
Preference number: 6 (lower is better)
Translates to: HFHSGSLTYVALASG*ERKPNGRLCDPPTQ
Trigger: TTGTGTTGGAGGATCACAGAGGCGACCATTTGGTTTACGTTCCAAGCCAGATGCTAGAGCCACATAAGTTAGTGAGCCACTATGGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp TCGTTGAGAAGCATCTATGAGGAAAGCCACGTCCATGTAATATTCTaGAAGAGAAGCATCCCCAGGCTCATGAGCAAGACCCAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SLRSIYEESHVHVIF*KRSIPRLMSKTQFF
Trigger: GAAGAACTGGGTCTTGCTCATGAGCCTGGGGATGCTTCTCTTCAAGAATATTACATGGACGTGGCTTTCCTCATAGATGCTTCTCAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CCAGTTCTTCTCTGCCATGACTTTCATGTTCAGAAGTaGGACTCGCCATTGCTACAGATTCCCGGTCATTTC +
Preference number: 6 (lower is better)
Translates to: PVLLCHDFHVQK*DSPLLQIPGHF
Trigger: GAAATGACCGGGAATCTGTAGCAATGGCGAGTCTCACTTCTGAACATGAAAGTCATGGCAGAGAAGAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp AAATGTCGAACCCGACCACTACATCCACAAAGCAATTaGCTTTCCCACAGCTCTGGCAAATTTCACGAACCA +
Preference number: 6 (lower is better)
Translates to: KCRTRPLHPQSN*LSHSSGKFHEP
Trigger: TGGTTCGTGAAATTTGCCAGAGCTGTGGGAAAGCCAATTGCTTTGTGGATGTAGTGGTCGGGTTCGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp ATTCTCAGGAAAGAAAGGCTCTTCTGCACAGGTGTTTaGAAAACACTTGTCATAGCAAAGTGTGCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: ILRKERLFCTGV*KTLVIAKCAAP
Trigger: CGGCGCTGCACACTTTGCTATGACAAGTGTTTTCCAAACACCTGTGCAGAAGAGCCTTTCTTTCCTGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TGTGGAGCCCAGAGATATCACAAATACGACATAGCCTaGACATTTGGCCCTCAAAGCCACCGTCTTCACAAA +
Preference number: 6 (lower is better)
Translates to: CGAQRYHKYDIA*TFGPQSHRLHK
Trigger: TTTGTGAAGACGGTGGCTTTGAGGGCCAAATGTCAAGGCTATGTCGTATTTGTGATATCTCTGGGCTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp CTGGAATTCTTCCCTGTTATAGTCACTGAATTGAACAACACCGACTaGGGATCTGTCGGCGCCAATCTGAATCTTCCCCACCAGATTTTT +
Preference number: 6 (lower is better)
Translates to: LEFFPVIVTELNNTD*GSVGANLNLPHQIF
Trigger: AAAAATCTGGTGGGGAAGATTCAGATTGGCGCCGACAGATCCCAAGTCGGTGTTGTTCAATTCAGTGACTATAACAGGGAAGAATTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp ATCTCTTTGTGTGGAGCCCAGAGATATCACAAATACGACATAGCCTaGACATTTGGCCCTCAAAGCCACCGTCTTCACAAATTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: ISLCGAQRYHKYDIA*TFGPQSHRLHKFLL
Trigger: GAGAAGGAATTTGTGAAGACGGTGGCTTTGAGGGCCAAATGTCAAGGCTATGTCGTATTTGTGATATCTCTGGGCTCCACACAAAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CAAACTCTTTCTTACGGATGCTGGACGACCCATCAATaGGAAAATAGATGTCGGCCTCCTTTGTATCCACAC +
Preference number: 6 (lower is better)
Translates to: QTLSYGCWTTHQ*ENRCRPPLYPH
Trigger: GTGTGGATACAAAGGAGGCCGACATCTATTTTCTCATTGATGGGTCGTCCAGCATCCGTAAGAAAGAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp GTAGCGAGAGACAGGAAATTCCACTTCATTCTTATGTaGATACTGCACAACTCCGACCCGAACTTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: VARDRKFHFILM*ILHNSDPNFVG
Trigger: CCCAACAAAGTTCGGGTCGGAGTTGTGCAGTATTCACATAAGAATGAAGTGGAATTTCCTGTCTCTCGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp GAGACAGGAAATTCCACTTCATTCTTATGTGAATACTaGACAACTCCGACCCGAACTTTGTTGGGGCCGATA +
Preference number: 6 (lower is better)
Translates to: ETGNSTSFLCEY*TTPTRTLLGPI
Trigger: TATCGGCCCCAACAAAGTTCGGGTCGGAGTTGTGCAGTATTCACATAAGAATGAAGTGGAATTTCCTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp CTTTCACGGCTTGGAAGTCATCGCTGGCGATGTTTTTaGAATTGTCTAAGAGGAATGCAACATCCATGTAGG +
Preference number: 6 (lower is better)
Translates to: LSRLGSHRWRCF*NCLRGMQHPCR
Trigger: CCTACATGGATGTTGCATTCCTCTTAGACAATTCCAAAAACATCGCCAGCGATGACTTCCAAGCCGTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TTATGTGAATACTGCACAACTCCGACCCGAACTTTGTaGGGGCCGATAGGAAACATGTCTATCACAGATGAC +
Preference number: 6 (lower is better)
Translates to: LCEYCTTPTRTL*GPIGNMSITDD
Trigger: GTCATCTGTGATAGACATGTTTCCTATCGGCCCCAACAAAGTTCGGGTCGGAGTTGTGCAGTATTCACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TCCAGCACAAACACGATGTCTAAGAGTTCGATCCTCTaGCAATCATGCAGAGCACACACTCGAAAGATGAGT +
Preference number: 6 (lower is better)
Translates to: SSTNTMSKSSIL*QSCRAHTRKMS
Trigger: ACTCATCTTTCGAGTGTGTGCTCTGCATGATTGCAAGAGGATCGAACTCTTAGACATCGTGTTTGTGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp AATTCTCAGGAAAGAAAGGCTCTTCTGCACAGGTGTTaGGAAAACACTTGTCATAGCAAAGTGTGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: NSQERKALLHRC*ENTCHSKVCSA
Trigger: GGCGCTGCACACTTTGCTATGACAAGTGTTTTCCAAACACCTGTGCAGAAGAGCCTTTCTTTCCTGAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TCTCACTTCCTTAAACTCGTTACGTCCTCCTACTCGTaGAGAAGCATCTATGAGGAAAGCCACGTCCATGTA +
Preference number: 6 (lower is better)
Translates to: SHFLKLVTSSYS*RSIYEESHVHV
Trigger: TACATGGACGTGGCTTTCCTCATAGATGCTTCTCAACGAGTAGGAGGACGTAACGAGTTTAAGGAAGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp TCCTCTTGCAATCATGCAGAGCACACACTCGAAAGATaGGTTTACTCTCTATGGCCTTCAGATGGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: SSCNHAEHTLER*VYSLWPSDGQS
Trigger: ACTTTGACCATCTGAAGGCCATAGAGAGTAAACTCATCTTTCGAGTGTGTGCTCTGCATGATTGCAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp ACTCGTTACGTCCTCCTACTCGTTGAGAAGCATCTATaGGGAAAGCCACGTCCATGTAATATTCTTGAAGAG +
Preference number: 6 (lower is better)
Translates to: TRYVLLLVEKHL*GKPRPCNILEE
Trigger: CTCTTCAAGAATATTACATGGACGTGGCTTTCCTCATAGATGCTTCTCAACGAGTAGGAGGACGTAACGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp AAAGTTGTCTACATGGACAGTGTTTTCTTTCTTCCCTaGCATGGTCTCCAGTTCATCTTGGTTGGCATTTCC +
Preference number: 6 (lower is better)
Translates to: KVVYMDSVFFLP*HGLQFILVGIS
Trigger: GGAAATGCCAACCAAGATGAACTGGAGACCATGGCAGGGAAGAAAGAAAACACTGTCCATGTAGACAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp TTATCCAGCTCCATTTGTTCAGCACGAGTAGAAACTTaGGTCCAGATTTCATTGCGGATCTTCTTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LSSSICSARVET*VQISLRIFFRK
Trigger: CTTCCTGAAGAAGATCCGCAATGAAATCTGGACCCAAGTTTCTACTCGTGCTGAACAAATGGAGCTGGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp CCAGAGATATCACAAATACGACATAGCCTTGACATTTaGCCCTCAAAGCCACCGTCTTCACAAATTCCTTCT +
Preference number: 6 (lower is better)
Translates to: PEISQIRHSLDI*PSKPPSSQIPS
Trigger: AGAAGGAATTTGTGAAGACGGTGGCTTTGAGGGCCAAATGTCAAGGCTATGTCGTATTTGTGATATCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TGTTCAGCACGAGTAGAAACTTGGGTCCAGATTTCATaGCGGATCTTCTTCAGGAAGTTCCCACTGTATGAT +
Preference number: 6 (lower is better)
Translates to: CSARVETWVQIS*RIFFRKFPLYD
Trigger: ATCATACAGTGGGAACTTCCTGAAGAAGATCCGCAATGAAATCTGGACCCAAGTTTCTACTCGTGCTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TTCTTATGTGAATACTGCACAACTCCGACCCGAACTTaGTTGGGGCCGATAGGAAACATGTCTATCACAGAT +
Preference number: 6 (lower is better)
Translates to: FLCEYCTTPTRT*LGPIGNMSITD
Trigger: ATCTGTGATAGACATGTTTCCTATCGGCCCCAACAAAGTTCGGGTCGGAGTTGTGCAGTATTCACATAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp ATTAAGCTGGAATTCTTCCCTGTTATAGTCACTGAATaGAACAACACCGACTTGGGATCTGTCGGCGCCAAT +
Preference number: 6 (lower is better)
Translates to: IKLEFFPVIVTE*NNTDLGSVGAN
Trigger: ATTGGCGCCGACAGATCCCAAGTCGGTGTTGTTCAATTCAGTGACTATAACAGGGAAGAATTCCAGCTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CAAAGGTTAGTGCTCCTCCTGTCAGAGTGTTTCTGTTaGTGGGAGACATCCTATCTATGGCTGCATAAATTT +
Preference number: 6 (lower is better)
Translates to: QRLVLLLSECFC*WETSYLWLHKF
Trigger: AAATTTATGCAGCCATAGATAGGATGTCTCCCATCAACAGAAACACTCTGACAGGAGGAGCACTAACCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp AATCCTTTTCCAAATTCAAAGCTGGAAAACTCATCGTaGCCGAATGTGTTAAGGGACACCACCAACAGAGCA +
Preference number: 6 (lower is better)
Translates to: NPFPNSKLENSS*PNVLRDTTNRA
Trigger: TGCTCTGTTGGTGGTGTCCCTTAACACATTCGGTCACGATGAGTTTTCCAGCTTTGAATTTGGAAAAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CAGTGGAGCTGGGGCAATGTGAAAGTAATCCAGTACTaGCGTTATCAAAGTTCTCACTTCCTTAAACTCGTT +
Preference number: 6 (lower is better)
Translates to: QWSWGNVKVIQY*RYQSSHFLKLV
Trigger: AACGAGTTTAAGGAAGTGAGAACTTTGATAACGTCAGTACTGGATTACTTTCACATTGCCCCAGCTCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp GGAGATGATGCTTCATTTGATGTACAGTGTTGTAAGTaGCCAAATCGAATTCCAGGTAGACTGGGCACTCTT +
Preference number: 6 (lower is better)
Translates to: GDDASFDVQCCK*PNRIPGRLGTL
Trigger: AAGAGTGCCCAGTCTACCTGGAATTCGATTTGGTCACTTACAACACTGTACATCAAATGAAGCATCATCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp ACTCGAAAGATGAGTTTACTCTCTATGGCCTTCAGATaGTCAAAGTTCTCAACATGGAAAACCAGACTGCCA +
Preference number: 6 (lower is better)
Translates to: TRKMSLLSMAFR*SKFSTWKTRLP
Trigger: TGGCAGTCTGGTTTTCCATGTTGAGAACTTTGACCATCTGAAGGCCATAGAGAGTAAACTCATCTTTCGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TTTATCCAGCTCCATTTGTTCAGCACGAGTAGAAACTaGGGTCCAGATTTCATTGCGGATCTTCTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: FIQLHLFSTSRN*GPDFIADLLQE
Trigger: TTCCTGAAGAAGATCCGCAATGAAATCTGGACCCAAGTTTCTACTCGTGCTGAACAAATGGAGCTGGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp TCCACTTCATTCTTATGTGAATACTGCACAACTCCGACCCGAACTTaGTTGGGGCCGATAGGAAACATGTCTATCACAGATGACATAAAT +
Preference number: 6 (lower is better)
Translates to: STSFLCEYCTTPTRT*LGPIGNMSITDDIN
Trigger: ATTTATGTCATCTGTGATAGACATGTTTCCTATCGGCCCCAACAAAGTTCGGGTCGGAGTTGTGCAGTATTCACATAAGAATGAAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp GGAGTATTTATTAAGCTGGAATTCTTCCCTGTTATAGTCACTGAATaGAACAACACCGACTTGGGATCTGTCGGCGCCAATCTGAATCTT +
Preference number: 6 (lower is better)
Translates to: GVFIKLEFFPVIVTE*NNTDLGSVGANLNL
Trigger: AAGATTCAGATTGGCGCCGACAGATCCCAAGTCGGTGTTGTTCAATTCAGTGACTATAACAGGGAAGAATTCCAGCTTAATAAATACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp AGGGCTTTCCCGGTGAATGTAAGACCTTTGAGTTGCTaGATGTTAAAAACAGCCTTTTTCAAGTCAATGCCA +
Preference number: 6 (lower is better)
Translates to: RAFPVNVRPLSC*MLKTAFFKSMP
Trigger: TGGCATTGACTTGAAAAAGGCTGTTTTTAACATCAAGCAACTCAAAGGTCTTACATTCACCGGGAAAGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp TTCCAACTCAATAATTTCCTGATACCGGCTCCCGTATaGAGCCATCCCAATCTTCATTCTTTGAGACTCAAT +
Preference number: 6 (lower is better)
Translates to: FQLNNFLIPAPV*SHPNLHSLRLN
Trigger: ATTGAGTCTCAAAGAATGAAGATTGGGATGGCTCAATACGGGAGCCGGTATCAGGAAATTATTGAGTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp ACTTCATTCTTATGTGAATACTGCACAACTCCGACCCGAACTTTGTaGGGGCCGATAGGAAACATGTCTATCACAGATGACATAAATATC +
Preference number: 6 (lower is better)
Translates to: TSFLCEYCTTPTRTL*GPIGNMSITDDINI
Trigger: GATATTTATGTCATCTGTGATAGACATGTTTCCTATCGGCCCCAACAAAGTTCGGGTCGGAGTTGTGCAGTATTCACATAAGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp CAATATGAAATCCAGGGCTTTCCCGGTGAATGTAAGACCTTTGAGTaGCTTGATGTTAAAAACAGCCTTTTTCAAGTCAATGCCATCCGT +
Preference number: 6 (lower is better)
Translates to: QYEIQGFPGECKTFE*LDVKNSLFQVNAIR
Trigger: ACGGATGGCATTGACTTGAAAAAGGCTGTTTTTAACATCAAGCAACTCAAAGGTCTTACATTCACCGGGAAAGCCCTGGATTTCATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp AGAGGCAATATGAAATCCAGGGCTTTCCCGGTGAATGTAAGACCTTaGAGTTGCTTGATGTTAAAAACAGCCTTTTTCAAGTCAATGCCA +
Preference number: 6 (lower is better)
Translates to: RGNMKSRAFPVNVRP*SCLMLKTAFFKSMP
Trigger: TGGCATTGACTTGAAAAAGGCTGTTTTTAACATCAAGCAACTCAAAGGTCTTACATTCACCGGGAAAGCCCTGGATTTCATATTGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp CAGAGAGCTTTCCAACTCAATAATTTCCTGATACCGGCTCCCGTATaGAGCCATCCCAATCTTCATTCTTTGAGACTCAATGTCAAAATT +
Preference number: 6 (lower is better)
Translates to: QRAFQLNNFLIPAPV*SHPNLHSLRLNVKI
Trigger: AATTTTGACATTGAGTCTCAAAGAATGAAGATTGGGATGGCTCAATACGGGAGCCGGTATCAGGAAATTATTGAGTTGGAAAGCTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp TATCAAAGTTCTCACTTCCTTAAACTCGTTACGTCCTCCTACTCGTaGAGAAGCATCTATGAGGAAAGCCACGTCCATGTAATATTCTTG +
Preference number: 6 (lower is better)
Translates to: YQSSHFLKLVTSSYS*RSIYEESHVHVIFL
Trigger: CAAGAATATTACATGGACGTGGCTTTCCTCATAGATGCTTCTCAACGAGTAGGAGGACGTAACGAGTTTAAGGAAGTGAGAACTTTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS TCA 72 bp CTGTTGAAGGGAAGTGTAGATGTAGTTCTTCATGATTaGTTGGTTGTCGTAGGTTGTAAAGGCAAACTCTGT +
Preference number: 6 (lower is better)
Translates to: LLKGSVDVVLHD*LVVVGCKGKLC
Trigger: ACAGAGTTTGCCTTTACAACCTACGACAACCAATCAATCATGAAGAACTACATCTACACTTCCCTTCAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp ATGAAATCCAGGGCTTTCCCGGTGAATGTAAGACCTTaGAGTTGCTTGATGTTAAAAACAGCCTTTTTCAAG +
Preference number: 6 (lower is better)
Translates to: MKSRAFPVNVRP*SCLMLKTAFFK
Trigger: CTTGAAAAAGGCTGTTTTTAACATCAAGCAACTCAAAGGTCTTACATTCACCGGGAAAGCCCTGGATTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp CACTTGGCTCTCAGAGATGCATTCCTTAAAACTTCTTaGTCTAAAGGGTTGGTTTCACCTGCAGTTACTATA +
Preference number: 6 (lower is better)
Translates to: HLALRDAFLKTS*SKGLVSPAVTI
Trigger: TATAGTAACTGCAGGTGAAACCAACCCTTTAGACAAAGAAGTTTTAAGGAATGCATCTCTGAGAGCCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 72 bp AGAGGGTGGCTTGCTAATTCTTCTAACTCCATGTCATaGTGTATCGGACCAAAGGAAAATACAAATATGGAG +
Preference number: 6 (lower is better)
Translates to: RGWLANSSNSMS*CIGPKENTNME
Trigger: CTCCATATTTGTATTTTCCTTTGGTCCGATACACAATGACATGGAGTTAGAAGAATTAGCAAGCCACCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS GCA 72 bp AGTGTTTCTGTTGATGGGAGACATCCTATCTATGGCTaGATAAATTTCCTCATGCGTGGAGTATTTATTAAG +
Preference number: 6 (lower is better)
Translates to: SVSVDGRHPIYG*INFLMRGVFIK
Trigger: CTTAATAAATACTCCACGCATGAGGAAATTTATGCAGCCATAGATAGGATGTCTCCCATCAACAGAAACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp AAAGGGCTTCAGAAATTTCACAATATAATTCAGATCTaGCTTGTACATTCTCCCAAGCTGTATCAGATGGTG +
Preference number: 6 (lower is better)
Translates to: KGLQKFHNIIQI*LVHSPKLYQMV
Trigger: CACCATCTGATACAGCTTGGGAGAATGTACAAGCCAGATCTGAATTATATTGTGAAATTTCTGAAGCCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CCA 72 bp ATATTTGTTGATAGCACGTCTGATCGAATGAACAAATaGCTTGATGAACTTGATGACATAGTCCAAATCTGG +
Preference number: 6 (lower is better)
Translates to: IFVDSTSDRMNK*LDELDDIVQIW
Trigger: CCAGATTTGGACTATGTCATCAAGTTCATCAAGCCATTTGTTCATTCGATCAGACGTGCTATCAACAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8
CDS CAA 90 bp TTGGCTCTCAGAGATGCATTCCTTAAAACTTCTTTGTCTAAAGGGTaGGTTTCACCTGCAGTTACTATAAAGATAACTTTGTTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: LALRDAFLKTSLSKG*VSPAVTIKITLFFL
Trigger: GAGGAAAAACAAAGTTATCTTTATAGTAACTGCAGGTGAAACCAACCCTTTAGACAAAGAAGTTTTAAGGAATGCATCTCTGAGAGCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165165.3
ENSMUST00000190193.8