Pregenerated sensors for COL6A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001119Ensembl transcript IDs: ENSMUST00000001147.5
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGATCCAGCCCAGATGGGGGAGGGGTCAGCAAGATGGCCACCATaGTGTACAAACCAAGGGCGGGATCTAGATAGGAGCTCAGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LDPAQMGEGSARWPP*CTNQGRDLDRSSGE Trigger: CTCACCTGAGCTCCTATCTAGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCCATCTGGGCTGGATCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR CCA 90 bp | GACAAGCACCTGATGAAGAGGAGGGGTCTCCTCCAAGTTTGTGTTTaGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: DKHLMKRRGLLQVCV*NSSCVQFPKSHNPA Trigger: TGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCTCCTCTTCATCAGGTGCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR TCA 90 bp | AAGCAAAGAGTGTGCATCTCAGCGTTCCCTTTAAGACAGTTGAGTTaGCCAGTTGGGTCACATTTCCTATTCCTGTTTTGTCAGTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: KQRVCISAFPLRQLS*PVGSHFLFLFCQWE Trigger: TTCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGGTCAACTCAACTGTCTTAAAGGGAACGCTGAGATGCACACTCTTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR TCA 90 bp | AACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCAAGCTaGACTCATGAGAAGGTCTGCTTCATGTTGAGCATGGAAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: NSSCVQFPKSHNPAS*THEKVCFMLSMEDR Trigger: TCTGTCTTCCATGCTCAACATGAAGCAGACCTTCTCATGAGTTCAGCTTGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR CAA 90 bp | CATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGCCTGTaGAAATGTGTCTCCATGCCATGTGTGTCCAGCCACGTGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: HFLFLFCQWEGREGL*KCVSMPCVSSHVCG Trigger: GCCACACACGTGGCTGGACACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR-3UTR CCA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTTTCCTGTTTTGTCAGTaGGAAGGGCGGGAAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DSDRTLECELSKLSLWVCFLFCQ*EGREGL Trigger: CAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAA...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR-3UTR TCA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTAGGTCTGCTTCATGTTaGGCATGGAAGACAGAACAC | + |
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Preference number: 2 (lower is better) Translates to: DSDRTLECELSKLSLWVCRSASC*AWKTEH Trigger: GTGTTCTGTCTTCCATGCTCAACATGAAGCAGACCT...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR TCA 72 bp | GCCCAGATGGGGGAGGGGTCAGCAAGATGGCCACCATaGTGTACAAACCAAGGGCGGGATCTAGATAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: AQMGEGSARWPP*CTNQGRDLDRS Trigger: GCTCCTATCTAGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCCATCTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR TCA 72 bp | TCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGCCTGTTaGAATGTGTCTCCATGCCATGTGTGTCCAGCCACG | + |
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Preference number: 3 (lower is better) Translates to: SCFVSGKGGKAC*NVSPCHVCPAT Trigger: CGTGGCTGGACACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR TCA 72 bp | GCCACTAAGGACCAGACCAAGATGCATGTAGGTCACTaGCAAGCACCTGATGAAGAGGAGGGGTCTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: ATKDQTKMHVGH*QAPDEEEGSPP Trigger: TGGAGGAGACCCCTCCTCTTCATCAGGTGCTTGTCAGTGACCTACATGCATCTTGGTCTGGTCCTTAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR-3UTR CAA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTGGGCGGGAAGGCCTGTaGAAATGTGTCTCCATGCCA | + |
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Preference number: 3 (lower is better) Translates to: DSDRTLECELSKLSLWVCGREGL*KCVSMP Trigger: TGGCATGGAGACACATTTCAACAGGCCTTCCCGCCC...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR CCA 72 bp | CCAGTTGGGTCACATTTCCTATTCCTGTTTTGTCAGTaGGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: PVGSHFLFLFCQ*EGREGLLKCVS Trigger: GGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR TCA 72 bp | CAGCAAGCTGAACTCATGAGAAGGTCTGCTTCATGTTaGGCATGGAAGACAGAACACAGACGGAAACTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QQAELMRRSASC*AWKTEHRRKLQ Trigger: CTGCAGTTTCCGTCTGTGTTCTGTCTTCCATGCTCAACATGAAGCAGACCTTCTCATGAGTTCAGCTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR CCA 72 bp | CTCAGCGTTCCCTTTAAGACAGTTGAGTTGACCAGTTaGGTCACATTTCCTATTCCTGTTTTGTCAGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: LSVPFKTVELTS*VTFPIPVLSVG Trigger: TCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGGTCAACTCAACTGTCTTAAAGGGAACGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR TCA 72 bp | GTGTGCATCTCAGCGTTCCCTTTAAGACAGTTGAGTTaGCCAGTTGGGTCACATTTCCTATTCCTGTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: VCISAFPLRQLS*PVGSHFLFLFC Trigger: ACAAAACAGGAATAGGAAATGTGACCCAACTGGTCAACTCAACTGTCTTAAAGGGAACGCTGAGATGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| 3UTR TCA 72 bp | TGTGTTCAATTTCCTAAAAGCCATAATCCAGCAAGCTaGACTCATGAGAAGGTCTGCTTCATGTTGAGCATG | + |
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Preference number: 3 (lower is better) Translates to: CVQFPKSHNPAS*THEKVCFMLSM Trigger: CATGCTCAACATGAAGCAGACCTTCTCATGAGTTCAGCTTGCTGGATTATGGCTTTTAGGAAATTGAACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTTCTGCATCGCGGCTATaGCCCCAGTCAGCTGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GGGVSKMATMMYKPRAGSSASRL*PQSAAV Trigger: CACGGCAGCTGACTGGGGGCATAGCCGCGATGCAGA...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTAGGGCCTCTGTTGCCTaGATACCCAGGGAAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GGGVSKMATMMYKPRAGSRASVA*IPREAG Trigger: CCCGGCTTCCCTGGGTATCCAGGCAACAGAGGCCCT...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTTGGGGCTCGTTCACCTaGGGTCCCACCACCACCACA | + |
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Preference number: 4 (lower is better) Translates to: GGGVSKMATMMYKPRAGSWGSFT*GPTTTT Trigger: TGTGGTGGTGGTGGGACCCCAGGTGAACGAGCCCCA...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | CAGCCCAGATGGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGAGGACCAACAGGTCCTaGGGCTCCTCTGAGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: QPRWGRGQQDGHHDVQTKRTNRS*GSSEAL Trigger: GAGGGCCTCAGAGGAGCCCCAGGACCTGTTGGTCCT...CTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCCATCTGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR TCA 90 bp | GACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTAGAGAGGTCCTGGGGCTCCTCTaGGGCCCTCAGGACCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: DRTLECELSKLSLWVCREVLGLL*GPQDLE Trigger: CTCCAGGTCCTGAGGGCCTCAGAGGAGCCCCAGGAC...CTCTCTACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | AGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGTCCAGCCACGTGTGTGGCCCGCCCTGGAGGTCCTCTaGCAGCCTGGCACTCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RPVEMCLHAMCVQPRVWPALEVL*QPGTQK Trigger: CTTTTGAGTGCCAGGCTGCCAGAGGACCTCCAGGGC...GGGCCACACACGTGGCTGGACACACATGGCATGGAGACACATTTCAACAGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTGGCTGTTGCTGCCCCTaGCCACTATACTGTACCACG | + |
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Preference number: 4 (lower is better) Translates to: GGGVSKMATMMYKPRAGSGCCCP*PLYCTT Trigger: CGTGGTACAGTATAGTGGCCAGGGGCAGCAACAGCC...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTCCAGGTGGTCAGGTGTaGTGGCCACAGAAAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: GGGVSKMATMMYKPRAGSPGGQV*WPQKRP Trigger: AGGTCTTTTCTGTGGCCATCACACCTGACCACCTGG...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR GCA 90 bp | AGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGTCCAGCCACGTGTGTGGCCCGCTGATGACCTCTTCTaGATCGCGGCTATGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RPVEMCLHAMCVQPRVWPADDLF*IAAMPP Trigger: TGGGGGCATAGCCGCGATGCAGAAGAGGTCATCAGC...GGGCCACACACGTGGCTGGACACACATGGCATGGAGACACATTTCAACAGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTGGCCACGTCGTACTCTaGAGTCTTGCCAGTGACAAG | + |
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Preference number: 4 (lower is better) Translates to: GGGVSKMATMMYKPRAGSGHVVL*SLASDK Trigger: CTTGTCACTGGCAAGACTGCAGAGTACGACGTGGCC...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGGTCGCCTCGGGGCCCTaGAGGTCCTCTGGCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TFPIPVLSVGRAGRPVEMVASGP*RSSGSL Trigger: CAGGCTGCCAGAGGACCTCCAGGGCCCCGAGGCGAC...CATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR GCA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTCCGAGTCTCCAGGGATaGCGACGGGCCCCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: DSDRTLECELSKLSLWVCPSLQG*RRAPLF Trigger: GAAGAGAGGGGCCCGTCGGCATCCCTGGAGACTCGG...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGCCTGGATGTCCTGTGTaGCCACCCAGCAGGCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: CQWEGREGLLKCVSMPCVPGCPV*PPSRLV Trigger: TACAAGCCTGCTGGGTGGCCACACAGGACATCCAGG...CACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | CAGCCCAGATGGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGTTGTTCTCCTTCAGGTaGGAGCCCCCTATGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QPRWGRGQQDGHHDVQTKLFSFR*EPPMSS Trigger: GCTGCTCATAGGGGGCTCCCACCTGAAGGAGAACAA...CTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCCATCTGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGCGTGCCGTTTCCTGGTaGTCCATCCTCACCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CQWEGREGLLKCVSMPCVRAVSW*SILTSL Trigger: GAGAGAGGTGAGGATGGACCACCAGGAAACGGCACG...CACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTGAAATGACATTGAGCTaGTCGGAGCCCGCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: GGGVSKMATMMYKPRAGSEMTLS*SEPATK Trigger: CTTTGTGGCGGGCTCCGACCAGCTCAATGTCATTTC...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTTGGCGAAGACCTTGGTaGTTTCGAAGTTGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GGGVSKMATMMYKPRAGSWRRPW*FRSCGC Trigger: GCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCA...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTCCAGTGCCACCTTCCTaGAGACTGTCTGGTAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: GGGVSKMATMMYKPRAGSPVPPS*RLSGRV Trigger: TACTCTACCAGACAGTCTCCAGGAAGGTGGCACTGG...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR TCA 90 bp | GACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTAGAGAGCACCCTCATCCCCCTTaGGGCCAGGGTAGCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: DRTLECELSKLSLWVCREHPHPP*GQGSLL Trigger: CAAAAGGCTACCCTGGCCTCAAGGGGGATGAGGGTG...CTCTCTACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR TCA 90 bp | GGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGTCCAGCCACCCACAGAAACTACCTaGATGTCTGCACCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GRAGRPVEMCLHAMCVQPPTETT*MSAPQS Trigger: GCTCTGTGGTGCAGACATTCAGGTAGTTTCTGTGGG...TGGCTGGACACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR GCA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTGCCTCGGTATCCCTTTaGCCCTTTGACCCCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: DSDRTLECELSKLSLWVCASVSL*PFDPTG Trigger: CCCCGTGGGGTCAAAGGGGCAAAGGGATACCGAGGC...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGTCCAGCCATCTTGCATCTGGTTGTaGCTGTACTGTACCACGCCC | + |
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Preference number: 4 (lower is better) Translates to: GRAGRPVEMCLHAMCVQPSCIWL*LYCTTP Trigger: GGGCGTGGTACAGTACAGCCACAACCAGATGCAAGA...TGGCTGGACACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR TCA 90 bp | CAGCCCAGATGGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGTTTGACCCCACGGGGTaGAATGTCGTTGTTATCCTC | + |
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Preference number: 4 (lower is better) Translates to: QPRWGRGQQDGHHDVQTKFDPTG*NVVVIL Trigger: GAGGATAACAACGACATTTCACCCCGTGGGGTCAAA...CTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCCATCTGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGTGGCCCCCTGAGAGTTaGCGTCTGAAAACAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: CQWEGREGLLKCVSMPCVWPPES*RLKTTA Trigger: TGCTGTTGTTTTCAGACGGCAACTCTCAGGGGGCCA...CACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR GCA 90 bp | GGTCTGCTTCATGTTGAGCATGGAAGACAGAACACAGACGGAAACTGCAGTGATGCACGCTGGGCCTCCTaGACAGCCTTCTCAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLLHVEHGRQNTDGNCSDARWAS*TAFSMA Trigger: GGCCATTGAGAAGGCTGTGCAGGAGGCCCAGCGTGC...ATCACTGCAGTTTCCGTCTGTGTTCTGTCTTCCATGCTCAACATGAAGCAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTAGAGAGTCCAGGGGCACCGTCTaGGCCAGCATTTCCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: DRTLECELSKLSLWVCRESRGTV*ASISFI Trigger: GATGAAGGAAATGCTGGCCCAGACGGTGCCCCTGGA...CTCTCTACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GAGTTGACCAGTTGGGTCACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGTCCTTGGTCACCCTGTaGTCCAGCTTCACCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ELTSWVTFPIPVLSVGRASLVTL*SSFTRV Trigger: GACCCGGGTGAAGCTGGACCACAGGGTGACCAAGGA...CGCCCTTCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGGTCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGGAGGCCCTCAGGACCTaGAGGACCCTCATCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: TFPIPVLSVGRAGRPVEMEALRT*RTLITS Trigger: CGAGGTGATGAGGGTCCTCCAGGTCCTGAGGGCCTC...CATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTTGGTCCCACATGTCCTaGAGGTCCCTGGGGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: DSDRTLECELSKLSLWVCWSHMS*RSLGSF Trigger: GAAGGACCCCAGGGACCTCCAGGACATGTGGGACCA...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTCTCATCTGGCCCAGGTaGTCCCACATGTCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: DSDRTLECELSKLSLWVCLIWPR*SHMSWR Trigger: CCTCCAGGACATGTGGGACCACCTGGGCCAGATGAG...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | CAGCCCAGATGGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGACGTGCTCTTGCATCTaGTTGTGGCTGTACTGTACC | + |
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Preference number: 4 (lower is better) Translates to: QPRWGRGQQDGHHDVQTKTCSCI*LWLYCT Trigger: GGTACAGTACAGCCACAACCAGATGCAAGAGCACGT...CTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCCATCTGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGGCTTGGCGAAGACCTTaGTGGTTTCGAAGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQWEGREGLLKCVSMPCVAWRRP*WFRSCG Trigger: GCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGC...CACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGTCCAGCCATGCTGTCCACAGAGCTaGCCAGCACTGTGTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRAGRPVEMCLHAMCVQPCCPQS*PALCNS Trigger: AGAATTACACAGTGCTGGCCAGCTCTGTGGACAGCA...TGGCTGGACACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | GACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTAGAGAGGCACTCTCTTCTTGGTaGCACCTGACGAGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DRTLECELSKLSLWVCREALSSW*HLTRLP Trigger: GGGAAGCCTCGTCAGGTGCCACCAAGAAGAGAGTGC...CTCTCTACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| 3UTR CAA 72 bp | TTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGCCTGTaGAAATGTGTCTCCATGCCATGTGTGTCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLFCQWEGREGL*KCVSMPCVSSH Trigger: GTGGCTGGACACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR TCA 90 bp | GAGTTGACCAGTTGGGTCACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGCCCAGTCAGCTGCCGTaGAATTGCGCCGGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELTSWVTFPIPVLSVGRAPSQLP*NCAGMC Trigger: ACACATACCGGCGCAATTTCACGGCAGCTGACTGGG...CGCCCTTCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGGTCAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR GCA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTATGCCCCCAGTCAGCTaGCGTGAAATTGCGCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DSDRTLECELSKLSLWVCMPPVS*REIAPV Trigger: TACCGGCGCAATTTCACGGCAGCTGACTGGGGGCAT...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR GCA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTCCGGGGGTCCTTGAATaGCATCAAATCCTGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSDRTLECELSKLSLWVCPGVLE*HQILGS Trigger: GCTCCCCAGGATTTGATGGCATTCAAGGACCCCCGG...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | AGGGGTCTCCTCCAAGTTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAATGTCCTGGAGGTCCCTaGGGTCCTTCTGGGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLLQVCVWNSSCVQFPKCPGGP*GPSGPR Trigger: CCGAGGCCCAGAAGGACCCCAGGGACCTCCAGGACA...TTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | ACCAGTTGGGTCACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGGTGGTTTCGAAGTTGTaGCTGCCGACACTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSWVTFPIPVLSVGRAGRVVSKL*LPTLAE Trigger: CTCAGCCAGTGTCGGCAGCCACAACTTCGAAACCAC...CCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCTTCATGTTGAGCATGGAAGACAGAACACAGACGGAAACTGCAGTGATTGTCTAGCAGGATGGTaGTGTCAGCCGGGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLLHVEHGRQNTDGNCSDCLAGW*CQPGRR Trigger: TCTCCTCCCCGGCTGACATCACCATCCTGCTAGACA...ATCACTGCAGTTTCCGTCTGTGTTCTGTCTTCCATGCTCAACATGAAGCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR GCA 90 bp | AGGGGTCTCCTCCAAGTTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAAATCCTGGGGAGCCCTTaGAGCCCGGTAGTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGLLQVCVWNSSCVQFPKILGSP*SPVVLG Trigger: ACCCAGGACTACCGGGCTGCAAGGGCTCCCCAGGAT...TTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR GCA 90 bp | GGTCTGCTTCATGTTGAGCATGGAAGACAGAACACAGACGGAAACTGCAGTGATCCCAGCCTCACCGTCTaGTCCAGCTTCACCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLHVEHGRQNTDGNCSDPSLTV*SSFTLF Trigger: GAAAAGGGTGAAGCTGGAGCAGACGGTGAGGCTGGG...ATCACTGCAGTTTCCGTCTGTGTTCTGTCTTCCATGCTCAACATGAAGCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR GCA 90 bp | GACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTAGAGAGAGTTCTGTAGGCCAATaGTCTCCGAGCTGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DRTLECELSKLSLWVCRESSVGQ*SPSCPA Trigger: TGCTGGACAGCTCGGAGAGCATTGGCCTACAGAACT...CTCTCTACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCTTCATGTTGAGCATGGAAGACAGAACACAGACGGAAACTGCAGTGATAGACGTGGCTCCAGGTaGTCAGGTGTGATGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GLLHVEHGRQNTDGNCSDRRGSR*SGVMAT Trigger: TGTGGCCATCACACCTGACCACCTGGAGCCACGTCT...ATCACTGCAGTTTCCGTCTGTGTTCTGTCTTCCATGCTCAACATGAAGCAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | TGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGTTGCGCCGGTATGTGTaGTCTGTGGCAATGATACTT | + |
|
Preference number: 4 (lower is better) Translates to: CQWEGREGLLKCVSMPCVLRRYV*SVAMIL Trigger: AAGTATCATTGCCACAGACCACACATACCGGCGCAA...CACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | GAGTTGACCAGTTGGGTCACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGTCCACAGGGCAGTCTTaGAAGGCAATCGCTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELTSWVTFPIPVLSVGRASTGQS*KAIALE Trigger: CTCCAAAGCGATTGCCTTCCAAGACTGCCCTGTGGA...CGCCCTTCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGGTCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | AGGGGTCTCCTCCAAGTTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAAACCCTGGTACCCGACTaGTCCAAGATCCCCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGLLQVCVWNSSCVQFPKTLVPD*SKIPRS Trigger: CGACCTGGGGATCTTGGACCAGTCGGGTACCAGGGT...TTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | ACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGGATCTCACACTCATCTaGCCCAGGTGGTCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: TFPIPVLSVGRAGRPVEMDLTLI*PRWSHM Trigger: CATGTGGGACCACCTGGGCCAGATGAGTGTGAGATC...CATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | GACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTAGAGAGCGAAGAGGATGTCAATaGGTCCACATGTGCACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DRTLECELSKLSLWVCRERRGCQ*VHMCTH Trigger: GTGAGTGCACATGTGGACCCATTGACATCCTCTTCG...CTCTCTACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR GCA 90 bp | GGTCTGCTTCATGTTGAGCATGGAAGACAGAACACAGACGGAAACTGCAGTGATCAATGGGTCCACATGTaGACTCACAGCAGGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GLLHVEHGRQNTDGNCSDQWVHM*THSRST Trigger: TGTGCTCCTGCTGTGAGTGCACATGTGGACCCATTG...ATCACTGCAGTTTCCGTCTGTGTTCTGTCTTCCATGCTCAACATGAAGCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR GCA 90 bp | AGGGGTCTCCTCCAAGTTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAACGACCTGGCTGTTGCTaGCCCTGGCCACTATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGLLQVCVWNSSCVQFPKRPGCC*PWPLYC Trigger: ACAGTATAGTGGCCAGGGGCAGCAACAGCCAGGTCG...TTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCAAACCCGGGTCTCCCCTTaGTCCTCTCACACCAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FVFGTPPVFNFLKAIIQQTRVSP*SSHTRG Trigger: ACCCCTGGTGTGAGAGGACCAAGGGGAGACCCGGGT...TTGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | TTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCAAGCTGAAGCACAGCCTTCTCAATaGCCTCTGCTGTGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPVFNFLKAIIQQAEAQPSQ*PLLWPP Trigger: AGGGGGCCACAGCAGAGGCCATTGAGAAGGCTGTGC...TTCAGCTTGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR TCA 90 bp | CAAGTTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCATGTACCACGCCCGCGTaGGACTGCCCTGGCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVCVWNSSCVQFPKSHNPCTTPA*DCPGSN Trigger: ATTTGAGCCAGGGCAGTCTCACGCGGGCGTGGTACA...TGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR TCA 90 bp | TTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCAAGCTGAACACCACAGAGCACACTaGGAGGTGTCGTGTCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPVFNFLKAIIQQAEHHRAH*EVSCPV Trigger: AACGGGACACGACACCTCTCAGTGTGCTCTGTGGTG...TTCAGCTTGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR GCA 90 bp | GGTCTGCTTCATGTTGAGCATGGAAGACAGAACACAGACGGAAACTGCAGTGATAACTACCTGAATGTCTaGACCACAGAGCACACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLHVEHGRQNTDGNCSDNYLNV*TTEHTE Trigger: CTCAGTGTGCTCTGTGGTGCAGACATTCAGGTAGTT...ATCACTGCAGTTTCCGTCTGTGTTCTGTCTTCCATGCTCAACATGAAGCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCAACACCAGCATCACCCTTaGGACCCGGGGGTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FVFGTPPVFNFLKAIIQQHQHHP*DPGVLE Trigger: TTCAAGGACCCCCGGGTCCCAAGGGTGATGCTGGTG...TTGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | CTGATGAAGAGGAGGGGTCTCCTCCAAGTTTGTGTTTGGAACTCCTCCTGTGTTGGAGGAGAATGTGATTaGACAGGTATAATCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LMKRRGLLQVCVWNSSCVGGECD*TGIIRT Trigger: TGTCCGGATTATACCTGTCCAATCACATTCTCCTCC...AACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCTCCTCTTCATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | TTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCAAGCTGAAGGTCCTCTGGCAGCCTaGCACTCAAAAGAACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPVFNFLKAIIQQAEGPLAA*HSKEQH Trigger: GTGTTGTTCTTTTGAGTGCCAGGCTGCCAGAGGACC...TTCAGCTTGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR GCA 90 bp | TTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCAAGCTGAAATGTCCACGTGCTCTTaGATCTGGTTGTGGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPVFNFLKAIIQQAEMSTCS*IWLWLY Trigger: GTACAGCCACAACCAGATGCAAGAGCACGTGGACAT...TTCAGCTTGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | CTGATGAAGAGGAGGGGTCTCCTCCAAGTTTGTGTTTGGAACTCCTCCTGTGTTTTATCTATACAGATCTaGGCTGTTATGTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMKRRGLLQVCVWNSSCVLSIQI*AVMFFR Trigger: TCTGAAGAACATAACAGCCCAGATCTGTATAGATAA...AACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCTCCTCTTCATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCACCTTGCGATAAGCCTTaGCAGGAAATGACATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVCVWNSSCVQFPKSHNPPCDKP*QEMTLS Trigger: GCTCAATGTCATTTCCTGCCAAGGCTTATCGCAAGG...TGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | GCCTCACCCGAGTCTCCAGGGATGCCGACGGGCCCCTCTCTTCCTTaGTCACCCTGTGGTCCAGCTTCACCCGGGTCTCCCCTTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASPESPGMPTGPSLP*SPCGPASPGSPLGP Trigger: AGGACCAAGGGGAGACCCGGGTGAAGCTGGACCACAGGGTGACCAAGGAAGAGAGGGGCCCGTCGGCATCCCTGGAGACTCGGGTGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS TCA 90 bp | GGTGGCGCTCGCCAAAGGCCACGTCGTACTCTGCAGTCTTGCCAGTaGCAAGCACACGGATGTGGGGCTCGTTCACCTGGGGTCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GGARQRPRRTLQSCQ*QAHGCGARSPGVPP Trigger: TGGTGGGACCCCAGGTGAACGAGCCCCACATCCGTGTGCTTGTCACTGGCAAGACTGCAGAGTACGACGTGGCCTTTGGCGAGCGCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | GGCAGTCTTGGAAGGCAATCGCTTTGGAGCCCTGGATGTCCTGTGTaGCCACCCAGCAGGCTTGTAGCAGCAGGGGCAGCAGAGCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLGRQSLWSPGCPV*PPSRLVAAGAAERG Trigger: CCCACGCTCTGCTGCCCCTGCTGCTACAAGCCTGCTGGGTGGCCACACAGGACATCCAGGGCTCCAAAGCGATTGCCTTCCAAGACTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | TGCTGCCCCTGGCCACTATACTGTACCACGGCCACCCGCACATCCTaGGAAGGATCCGCCCTGCCTGCTGACAGGAATCGCTCAGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCPWPLYCTTATRTS*EGSALPADRNRSAR Trigger: CCTAGCTGAGCGATTCCTGTCAGCAGGCAGGGCGGATCCTTCCCAGGATGTGCGGGTGGCCGTGGTACAGTATAGTGGCCAGGGGCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | ACCTGGGGTCCCACCACCACCACAAAGATCTCAATGCCTGCACGCTaGGCCTCCTGCACAGCCTTCTCAATGGCCTCTGCTGTGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TWGPTTTTKISMPAR*ASCTAFSMASAVAP Trigger: GGGGGCCACAGCAGAGGCCATTGAGAAGGCTGTGCAGGAGGCCCAGCGTGCAGGCATTGAGATCTTTGTGGTGGTGGTGGGACCCCAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 90 bp | GGGGCTCGTTCACCTGGGGTCCCACCACCACCACAAAGATCTCAATaGCTGCACGCTGGGCCTCCTGCACAGCCTTCTCAATGGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GARSPGVPPPPQRSQ*LHAGPPAQPSQWPL Trigger: CAGAGGCCATTGAGAAGGCTGTGCAGGAGGCCCAGCGTGCAGGCATTGAGATCTTTGTGGTGGTGGTGGGACCCCAGGTGAACGAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 90 bp | GGCCTCTGTTGCCTGGATACCCAGGGAAGCCGGGGAAACCTTCCGTaGCGTTTCCTGGTGGTCCATCCTCACCTCTCTCACCCATCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLCCLDTQGSRGNLP*RFLVVHPHLSHPSV Trigger: GACTGATGGGTGAGAGAGGTGAGGATGGACCACCAGGAAACGGCACGGAAGGTTTCCCCGGCTTCCCTGGGTATCCAGGCAACAGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 90 bp | GGCCAGGGTAGCCTTTTGTGCCATTTAGCCCAGGAGGGCCTCTGTTaGCTGGATACCCAGGGAAGCCGGGGAAACCTTCCGTGCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQGSLLCHLAQEGLC*LDTQGSRGNLPCRF Trigger: GAAACGGCACGGAAGGTTTCCCCGGCTTCCCTGGGTATCCAGGCAACAGAGGCCCTCCTGGGCTAAATGGCACAAAAGGCTACCCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 90 bp | TATACTGTACCACGGCCACCCGCACATCCTGGGAAGGATCCGCCCTaGCTGCTGACAGGAATCGCTCAGCTAGGCGCTTGGCGAAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: YTVPRPPAHPGKDPP*LLTGIAQLGAWRRP Trigger: AGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGTCAGCAGGCAGGGCGGATCCTTCCCAGGATGTGCGGGTGGCCGTGGTACAGTATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 90 bp | ACCCCGTCTCTCCCTTCATGCCGTCGACCCCGTCGATTCCGCGCTTaGCTTTCTCGCCCTTGTAACCTTTCGGTCCTCTGGAACCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TPSLPSCRRPRRFRA*LSRPCNLSVLWNPS Trigger: AGAAGGGTTCCAGAGGACCGAAAGGTTACAAGGGCGAGAAAGGCAAGCGCGGAATCGACGGGGTCGACGGCATGAAGGGAGAGACGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | AAGGATCCGCCCTGCCTGCTGACAGGAATCGCTCAGCTAGGCGCTTaGCGAAGACCTTGGTGGTTTCGAAGTTGTGGCTGCCGACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KDPPCLLTGIAQLGA*RRPWWFRSCGCRHW Trigger: CCAGTGTCGGCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGTCAGCAGGCAGGGCGGATCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | GCAGTCTTGCCAGTGACAAGCACACGGATGTGGGGCTCGTTCACCTaGGGTCCCACCACCACCACAAAGATCTCAATGCCTGCACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVLPVTSTRMWGSFT*GPTTTTKISMPARW Trigger: CCAGCGTGCAGGCATTGAGATCTTTGTGGTGGTGGTGGGACCCCAGGTGAACGAGCCCCACATCCGTGTGCTTGTCACTGGCAAGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | AATAGATCCACAGGGCAGTCTTGGAAGGCAATCGCTTTGGAGCCCTaGATGTCCTGTGTGGCCACCCAGCAGGCTTGTAGCAGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NRSTGQSWKAIALEP*MSCVATQQACSSRG Trigger: GCCCCTGCTGCTACAAGCCTGCTGGGTGGCCACACAGGACATCCAGGGCTCCAAAGCGATTGCCTTCCAAGACTGCCCTGTGGATCTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | GCCACGTCGTACTCTGCAGTCTTGCCAGTGACAAGCACACGGATGTaGGGCTCGTTCACCTGGGGTCCCACCACCACCACAAAGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ATSYSAVLPVTSTRM*GSFTWGPTTTTKIS Trigger: TGAGATCTTTGTGGTGGTGGTGGGACCCCAGGTGAACGAGCCCCACATCCGTGTGCTTGTCACTGGCAAGACTGCAGAGTACGACGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS TCA 90 bp | TGGGCCTCCTGCACAGCCTTCTCAATGGCCTCTGCTGTGGCCCCCTaGGAGTTGCCGTCTGAAAACAACAGCACTCTCTTCTTGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WASCTAFSMASAVAP*ELPSENNSTLFLVA Trigger: TGCCACCAAGAAGAGAGTGCTGTTGTTTTCAGACGGCAACTCTCAGGGGGCCACAGCAGAGGCCATTGAGAAGGCTGTGCAGGAGGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | CTCTCCGAGGTGTCGAGCACGAAGAATAGATCCACAGGGCAGTCTTaGAAGGCAATCGCTTTGGAGCCCTGGATGTCCTGTGTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LSEVSSTKNRSTGQS*KAIALEPWMSCVAT Trigger: GGTGGCCACACAGGACATCCAGGGCTCCAAAGCGATTGCCTTCCAAGACTGCCCTGTGGATCTATTCTTCGTGCTCGACACCTCGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | CGGCTATGCCCCCAGTCAGCTGCCGTGAAATTGCGCCGGTATGTGTaGTCTGTGGCAATGATACTTAGACGTGGCTCCAGGTGGTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RLCPQSAAVKLRRYV*SVAMILRRGSRWSG Trigger: ACCTGACCACCTGGAGCCACGTCTAAGTATCATTGCCACAGACCACACATACCGGCGCAATTTCACGGCAGCTGACTGGGGGCATAGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | CTGCTGACAGGAATCGCTCAGCTAGGCGCTTGGCGAAGACCTTGGTaGTTTCGAAGTTGTGGCTGCCGACACTGGCTGAGCTGTCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLTGIAQLGAWRRPW*FRSCGCRHWLSCLA Trigger: TGCTAGACAGCTCAGCCAGTGTCGGCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGTCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | TGCCTGCTGACAGGAATCGCTCAGCTAGGCGCTTGGCGAAGACCTTaGTGGTTTCGAAGTTGTGGCTGCCGACACTGGCTGAGCTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CLLTGIAQLGAWRRP*WFRSCGCRHWLSCL Trigger: TAGACAGCTCAGCCAGTGTCGGCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGTCAGCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGTTGGGTCACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGGGGCCCCTCTCTTCCTaGGTCACCCTGTGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSWVTFPIPVLSVGRAGRGPLSS*VTLWSS Trigger: GCTGGACCACAGGGTGACCAAGGAAGAGAGGGGCCC...CCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAGATGGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGCAGGGCCTGGTAGTTaGGTACACGGAATAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QPRWGRGQQDGHHDVQTKAGPGS*VHGIGG Trigger: GCCACCTATTCCGTGTACCAAACTACCAGGCCCTGC...CTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCCATCTGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 90 bp | CTGGCTGATGACCTCTTCTGCATCGCGGCTATGCCCCCAGTCAGCTaGCGTGAAATTGCGCCGGTATGTGTGGTCTGTGGCAATGATACT | + |
|
Preference number: 5 (lower is better) Translates to: LADDLFCIAAMPPVS*REIAPVCVVCGNDT Trigger: AGTATCATTGCCACAGACCACACATACCGGCGCAATTTCACGGCAGCTGACTGGGGGCATAGCCGCGATGCAGAAGAGGTCATCAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | GCACGAAGAATAGATCCACAGGGCAGTCTTGGAAGGCAATCGCTTTaGAGCCCTGGATGTCCTGTGTGGCCACCCAGCAGGCTTGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARRIDPQGSLGRQSL*SPGCPVWPPSRLVA Trigger: TGCTACAAGCCTGCTGGGTGGCCACACAGGACATCCAGGGCTCCAAAGCGATTGCCTTCCAAGACTGCCCTGTGGATCTATTCTTCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | CGATTCCGCGCTTGCCTTTCTCGCCCTTGTAACCTTTCGGTCCTCTaGAACCCTTCTCTCCACGGCTCCCCTTTTCTCCCTTCATACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RFRACLSRPCNLSVL*NPSLHGSPFLPSYP Trigger: AGGGTATGAAGGGAGAAAAGGGGAGCCGTGGAGAGAAGGGTTCCAGAGGACCGAAAGGTTACAAGGGCGAGAAAGGCAAGCGCGGAATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | TTCTCCTTCACCAGGGAGATACCTGGCCGACCTTGCGATAAGCCTTaGCAGGAAATGACATTGAGCTGGTCGGAGCCCGCCACAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSFTREIPGRPCDKP*QEMTLSWSEPATKP Trigger: TGGCTTTGTGGCGGGCTCCGACCAGCTCAATGTCATTTCCTGCCAAGGCTTATCGCAAGGTCGGCCAGGTATCTCCCTGGTGAAGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | CTGATGAAGAGGAGGGGTCTCCTCCAAGTTTGTGTTTGGAACTCCTCCTGTGTTAATCCTGGGGAGCCCTaGCAGCCCGGTAGTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LMKRRGLLQVCVWNSSCVNPGEP*QPGSPG Trigger: CCCAGGACTACCGGGCTGCAAGGGCTCCCCAGGATT...AACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCTCCTCTTCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | ACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGCACCCGGGTCTCCCCTaGGTCCTCTCACACCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TFPIPVLSVGRAGRPVEMHPGLP*VLSHQG Trigger: CCCCTGGTGTGAGAGGACCAAGGGGAGACCCGGGTG...CATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGGGGTCAGCAAGATGGCCACCATGATGTACAAACCAAGGGCGGGATCTTGCTCTTGCATCTGGTaGTGGCTGTACTGTACCACG | + |
|
Preference number: 5 (lower is better) Translates to: GGGVSKMATMMYKPRAGSCSCIW*WLYCTT Trigger: CGTGGTACAGTACAGCCACAACCAGATGCAAGAGCA...AGATCCCGCCCTTGGTTTGTACATCATGGTGGCCATCTTGCTGACCCCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS TCA 90 bp | ACGTGCTCTTGCATCTGGTTGTGGCTGTACTGTACCACGCCCGCGTaGGACTGCCCTGGCTCAAATTTGACCAGCTCATCCTTGCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TCSCIWLWLYCTTPA*DCPGSNLTSSSLLN Trigger: GTTGAGCAAGGATGAGCTGGTCAAATTTGAGCCAGGGCAGTCTCACGCGGGCGTGGTACAGTACAGCCACAACCAGATGCAAGAGCACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 90 bp | AATCATGTCCACAATGGTGTCAATGGTCTGGCTGATGACCTCTTCTaGATCGCGGCTATGCCCCCAGTCAGCTGCCGTGAAATTGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NHVHNGVNGLADDLF*IAAMPPVSCREIAP Trigger: CGGCGCAATTTCACGGCAGCTGACTGGGGGCATAGCCGCGATGCAGAAGAGGTCATCAGCCAGACCATTGACACCATTGTGGACATGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | GCAGGAGCACATTTTCATGATGATATCCAGGATCTCACACTCATCTaGCCCAGGTGGTCCCACATGTCCTGGAGGTCCCTGGGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGAHFHDDIQDLTLI*PRWSHMSWRSLGSF Trigger: GAAGGACCCCAGGGACCTCCAGGACATGTGGGACCACCTGGGCCAGATGAGTGTGAGATCCTGGATATCATCATGAAAATGTGCTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | CCTGGCCGACCTTGCGATAAGCCTTGGCAGGAAATGACATTGAGCTaGTCGGAGCCCGCCACAAAGCCAAACACATCCTTGATTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PGRPCDKPWQEMTLS*SEPATKPNTSLIPT Trigger: TGTGGGAATCAAGGATGTGTTTGGCTTTGTGGCGGGCTCCGACCAGCTCAATGTCATTTCCTGCCAAGGCTTATCGCAAGGTCGGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGTCCAGCCAACGTCTGTGGCGTCGTaGATGAAATCCATGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRAGRPVEMCLHAMCVQPTSVAS*MKSMLS Trigger: GGACAGCATGGATTTCATCAACGACGCCACAGACGT...TGGCTGGACACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS TCA 90 bp | CCCGCCACAAAGCCAAACACATCCTTGATTCCCACAGAAACTACCTaGATGTCTGCACCACAGAGCACACTGAGAGGTGTCGTGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PATKPNTSLIPTETT*MSAPQSTLRGVVSR Trigger: ACGGGACACGACACCTCTCAGTGTGCTCTGTGGTGCAGACATTCAGGTAGTTTCTGTGGGAATCAAGGATGTGTTTGGCTTTGTGGCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | ACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGTGGCAGGAAATGACATaGAGCTGGTCGGAGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TFPIPVLSVGRAGRPVEMWQEMT*SWSEPA Trigger: GGCGGGCTCCGACCAGCTCAATGTCATTTCCTGCCA...CATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGTTGATGCCCAGGTGTTaGGCCTCATTTACTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: CQWEGREGLLKCVSMPCVLMPRC*ASFTAS Trigger: AGATGCAGTAAATGAGGCCAAACACCTGGGCATCAA...CACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | AGGGGTCTCCTCCAAGTTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAACCAGGAGGGCCTCTGTaGCCTGGATACCCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGLLQVCVWNSSCVQFPKPGGPL*PGYPGK Trigger: CTTCCCTGGGTATCCAGGCAACAGAGGCCCTCCTGG...TTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | GATTCTGACAGGACACTTGAGTGTGAACTGTCCAAGCTAAGCCTCTGGGTGTGTCGCTTGGCGAAGACCTaGGTGGTTTCGAAGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSDRTLECELSKLSLWVCRLAKT*VVSKLW Trigger: CCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCG...ACACACCCAGAGGCTTAGCTTGGACAGTTCACACTCAAGTGTCCTGTCAGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | GAGTTGACCAGTTGGGTCACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGTGCCCTGGCTCAAATTaGACCAGCTCATCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELTSWVTFPIPVLSVGRACPGSN*TSSSLL Trigger: GAGCAAGGATGAGCTGGTCAAATTTGAGCCAGGGCA...CGCCCTTCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGGTCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | CTGATGAAGAGGAGGGGTCTCCTCCAAGTTTGTGTTTGGAACTCCTCCTGTGTTTTCTTGACAGCTTCTTaGAAGTCCTGGGCGTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LMKRRGLLQVCVWNSSCVFLTAS*KSWALR Trigger: CCGCAACGCCCAGGACTTCAAAGAAGCTGTCAAGAA...AACACAGGAGGAGTTCCAAACACAAACTTGGAGGAGACCCCTCCTCTTCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGTGTCTCCATGCCATGTGTGAAGCCAAACACATCCTaGATTCCCACAGAAACTACC | + |
|
Preference number: 5 (lower is better) Translates to: CQWEGREGLLKCVSMPCVKPNTS*IPTETT Trigger: GGTAGTTTCTGTGGGAATCAAGGATGTGTTTGGCTT...CACACATGGCATGGAGACACATTTCAACAGGCCTTCCCGCCCTTCCCACTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 90 bp | TGTTCCACGTTATTTTTAATCATGTCCACAATGGTGTCAATGGTCTaGCTGATGACCTCTTCTGCATCGCGGCTATGCCCCCAGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSTLFLIMSTMVSMV*LMTSSASRLCPQSA Trigger: AGCTGACTGGGGGCATAGCCGCGATGCAGAAGAGGTCATCAGCCAGACCATTGACACCATTGTGGACATGATTAAAAATAACGTGGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | GGTCTGCTTCATGTTGAGCATGGAAGACAGAACACAGACGGAAACTGCAGTGATACCACGATCAAGTACTaGTTCTCCTTCAGGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLLHVEHGRQNTDGNCSDTTIKY*FSFRWE Trigger: CTCCCACCTGAAGGAGAACAAGTACTTGATCGTGGT...ATCACTGCAGTTTCCGTCTGTGTTCTGTCTTCCATGCTCAACATGAAGCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | ACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGGGAAGGCCTGTTGAAATGTACCTGTCTCTCAGGTaGTCAATGAAGCGCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFPIPVLSVGRAGRPVEMYLSLR*SMKRLV Trigger: CACTAAGCGCTTCATTGACAACCTGAGAGACAGGTA...CATTTCAACAGGCCTTCCCGCCCTTCCCACTGACAAAACAGGAATAGGAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | GAGTTGACCAGTTGGGTCACATTTCCTATTCCTGTTTTGTCAGTGGGAAGGGCGATCCATTGTAGCTTCTaGACAGCTTCTTTGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELTSWVTFPIPVLSVGRAIHCSF*TASLKS Trigger: GGACTTCAAAGAAGCTGTCAAGAAGCTACAATGGAT...CGCCCTTCCCACTGACAAAACAGGAATAGGAAATGTGACCCAACTGGTCAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | TTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCAATTGACCAGCTCATCCTaGCTCAACCGGTCAATGACC | + |
|
Preference number: 5 (lower is better) Translates to: FVFGTPPVFNFLKAIIQQLTSSS*LNRSMT Trigger: GGTCATTGACCGGTTGAGCAAGGATGAGCTGGTCAA...TTGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS-3UTR CAA 90 bp | TTTGTGTTTGGAACTCCTCCTGTGTTCAATTTCCTAAAAGCCATAATCCAGCAAAACCGGTCAATGACCTaGATGATGAAGTCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FVFGTPPVFNFLKAIIQQNRSMT*MMKSLA Trigger: TGCCAAGGACTTCATCATCAAGGTCATTGACCGGTT...TTGCTGGATTATGGCTTTTAGGAAATTGAACACAGGAGGAGTTCCAAACACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CAA 90 bp | AGCCTCACCCGAGTCTCCAGGGATGCCGACGGGCCCCTCTCTTCCTaGGTCACCCTGTGGTCCAGCTTCACCCGGGTCTCCCCTTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLTRVSRDADGPLSS*VTLWSSFTRVSPWS Trigger: GGACCAAGGGGAGACCCGGGTGAAGCTGGACCACAGGGTGACCAAGGAAGAGAGGGGCCCGTCGGCATCCCTGGAGACTCGGGTGAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 72 bp | CCACGGCCACCCGCACATCCTGGGAAGGATCCGCCCTaGCTGCTGACAGGAATCGCTCAGCTAGGCGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRPPAHPGKDPP*LLTGIAQLGAW Trigger: CCAAGCGCCTAGCTGAGCGATTCCTGTCAGCAGGCAGGGCGGATCCTTCCCAGGATGTGCGGGTGGCCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CAA 72 bp | CGAGTCTCCAGGGATGCCGACGGGCCCCTCTCTTCCTaGGTCACCCTGTGGTCCAGCTTCACCCGGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVSRDADGPLSS*VTLWSSFTRVS Trigger: GGAGACCCGGGTGAAGCTGGACCACAGGGTGACCAAGGAAGAGAGGGGCCCGTCGGCATCCCTGGAGACTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 72 bp | CTCACACTCATCTGGCCCAGGTGGTCCCACATGTCCTaGAGGTCCCTGGGGTCCTTCTGGGCCTCGGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: LTLIWPRWSHMS*RSLGSFWASVS Trigger: GGATACCGAGGCCCAGAAGGACCCCAGGGACCTCCAGGACATGTGGGACCACCTGGGCCAGATGAGTGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CAA 72 bp | CCTTTCCCGAAGTACTTGACCGCATCCACGCTGGCCTaGAGCTCATCGCGGCCACTGGGCATGCGCGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PFPKYLTASTLA*SSSRPLGMRVS Trigger: GCTCACGCGCATGCCCAGTGGCCGCGATGAGCTCAAGGCCAGCGTGGATGCGGTCAAGTACTTCGGGAAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CAA 90 bp | GTCCTGGGCGTTGCGGACGTTGGGGCTCCGCATGTCCACGTGCTCTaGCATCTGGTTGTGGCTGTACTGTACCACGCCCGCGTGAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: VLGVADVGAPHVHVL*HLVVAVLYHARVRL Trigger: CAGTCTCACGCGGGCGTGGTACAGTACAGCCACAACCAGATGCAAGAGCACGTGGACATGCGGAGCCCCAACGTCCGCAACGCCCAGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS TCA 72 bp | AAGGCACCAGCATCACCCTTGGGACCCGGGGGTCCTTaGATGCCATCAAATCCTGGGGAGCCCTTGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KAPASPLGPGGP*MPSNPGEPLQP Trigger: GGGCTGCAAGGGCTCCCCAGGATTTGATGGCATTCAAGGACCCCCGGGTCCCAAGGGTGATGCTGGTGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 72 bp | TTGCGGACGTTGGGGCTCCGCATGTCCACGTGCTCTTaGATCTGGTTGTGGCTGTACTGTACCACGCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LRTLGLRMSTCS*IWLWLYCTTPA Trigger: CGCGGGCGTGGTACAGTACAGCCACAACCAGATGCAAGAGCACGTGGACATGCGGAGCCCCAACGTCCGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CCA 72 bp | TGGCCACTATACTGTACCACGGCCACCCGCACATCCTaGGAAGGATCCGCCCTGCCTGCTGACAGGAATCGC | + |
|
Preference number: 6 (lower is better) Translates to: WPLYCTTATRTS*EGSALPADRNR Trigger: GCGATTCCTGTCAGCAGGCAGGGCGGATCCTTCCCAGGATGTGCGGGTGGCCGTGGTACAGTATAGTGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CAA 72 bp | GTTGCGGACGTTGGGGCTCCGCATGTCCACGTGCTCTaGCATCTGGTTGTGGCTGTACTGTACCACGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VADVGAPHVHVL*HLVVAVLYHAR Trigger: GCGGGCGTGGTACAGTACAGCCACAACCAGATGCAAGAGCACGTGGACATGCGGAGCCCCAACGTCCGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CAA 90 bp | CGGAATAGGTGGCGCTCGCCAAAGGCCACGTCGTACTCTGCAGTCTaGCCAGTGACAAGCACACGGATGTGGGGCTCGTTCACCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RNRWRSPKATSYSAV*PVTSTRMWGSFTWG Trigger: ACCCCAGGTGAACGAGCCCCACATCCGTGTGCTTGTCACTGGCAAGACTGCAGAGTACGACGTGGCCTTTGGCGAGCGCCACCTATTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS TCA 72 bp | CGCCAAAGGCCACGTCGTACTCTGCAGTCTTGCCAGTaGCAAGCACACGGATGTGGGGCTCGTTCACCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RQRPRRTLQSCQ*QAHGCGARSPG Trigger: CCCAGGTGAACGAGCCCCACATCCGTGTGCTTGTCACTGGCAAGACTGCAGAGTACGACGTGGCCTTTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 72 bp | GACCTCTTCTGCATCGCGGCTATGCCCCCAGTCAGCTaGCGTGAAATTGCGCCGGTATGTGTGGTCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DLFCIAAMPPVS*REIAPVCVVCG Trigger: GCCACAGACCACACATACCGGCGCAATTTCACGGCAGCTGACTGGGGGCATAGCCGCGATGCAGAAGAGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 72 bp | CTCCCTTCATGCCGTCGACCCCGTCGATTCCGCGCTTaGCTTTCTCGCCCTTGTAACCTTTCGGTCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSCRRPRRFRA*LSRPCNLSVLW Trigger: CCAGAGGACCGAAAGGTTACAAGGGCGAGAAAGGCAAGCGCGGAATCGACGGGGTCGACGGCATGAAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 72 bp | TGCCTGGATACCCAGGGAAGCCGGGGAAACCTTCCGTaGCGTTTCCTGGTGGTCCATCCTCACCTCTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CLDTQGSRGNLP*RFLVVHPHLSH Trigger: GTGAGAGAGGTGAGGATGGACCACCAGGAAACGGCACGGAAGGTTTCCCCGGCTTCCCTGGGTATCCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS GCA 72 bp | TGGGCGTTGCGGACGTTGGGGCTCCGCATGTCCACGTaGTCTTGCATCTGGTTGTGGCTGTACTGTACCACG | + |
|
Preference number: 6 (lower is better) Translates to: WALRTLGLRMST*SCIWLWLYCTT Trigger: CGTGGTACAGTACAGCCACAACCAGATGCAAGAGCACGTGGACATGCGGAGCCCCAACGTCCGCAACGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS GCA 72 bp | ACCACAAAGATCTCAATGCCTGCACGCTGGGCCTCCTaGACAGCCTTCTCAATGGCCTCTGCTGTGGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: TTKISMPARWAS*TAFSMASAVAP Trigger: GGGGGCCACAGCAGAGGCCATTGAGAAGGCTGTGCAGGAGGCCCAGCGTGCAGGCATTGAGATCTTTGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | TGGCGCTCGCCAAAGGCCACGTCGTACTCTGCAGTCTaGCCAGTGACAAGCACACGGATGTGGGGCTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WRSPKATSYSAV*PVTSTRMWGSF Trigger: GAACGAGCCCCACATCCGTGTGCTTGTCACTGGCAAGACTGCAGAGTACGACGTGGCCTTTGGCGAGCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 90 bp | GAAGGATCCGCCCTGCCTGCTGACAGGAATCGCTCAGCTAGGCGCTaGGCGAAGACCTTGGTGGTTTCGAAGTTGTGGCTGCCGACACTG | + |
|
Preference number: 6 (lower is better) Translates to: EGSALPADRNRSARR*AKTLVVSKLWLPTL Trigger: CAGTGTCGGCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGTCAGCAGGCAGGGCGGATCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS TCA 72 bp | CCTCTCCTGGGTCTCCCACTTCACCCTCATCCCCCTTaGGGCCAGGGTAGCCTTTTGTGCCATTTAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLGLPLHPHPP*GQGSLLCHLAQ Trigger: CTGGGCTAAATGGCACAAAAGGCTACCCTGGCCTCAAGGGGGATGAGGGTGAAGTGGGAGACCCAGGAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | ACAGGGCAGTCTTGGAAGGCAATCGCTTTGGAGCCCTaGATGTCCTGTGTGGCCACCCAGCAGGCTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TGQSWKAIALEP*MSCVATQQACS Trigger: GCTACAAGCCTGCTGGGTGGCCACACAGGACATCCAGGGCTCCAAAGCGATTGCCTTCCAAGACTGCCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | GGAATCGCTCAGCTAGGCGCTTGGCGAAGACCTTGGTaGTTTCGAAGTTGTGGCTGCCGACACTGGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GIAQLGAWRRPW*FRSCGCRHWLS Trigger: GCTCAGCCAGTGTCGGCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | CCCTGCCTGCTGACAGGAATCGCTCAGCTAGGCGCTTaGCGAAGACCTTGGTGGTTTCGAAGTTGTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PCLLTGIAQLGA*RRPWWFRSCGC Trigger: GCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGTCAGCAGGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | GGGCCTCCTGCACAGCCTTCTCAATGGCCTCTGCTGTaGCCCCCTGAGAGTTGCCGTCTGAAAACAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GPPAQPSQWPLL*PPESCRLKTTA Trigger: TGCTGTTGTTTTCAGACGGCAACTCTCAGGGGGCCACAGCAGAGGCCATTGAGAAGGCTGTGCAGGAGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | TACTCTGCAGTCTTGCCAGTGACAAGCACACGGATGTaGGGCTCGTTCACCTGGGGTCCCACCACCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: YSAVLPVTSTRM*GSFTWGPTTTT Trigger: TGTGGTGGTGGTGGGACCCCAGGTGAACGAGCCCCACATCCGTGTGCTTGTCACTGGCAAGACTGCAGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | GCCCTGCCTGCTGACAGGAATCGCTCAGCTAGGCGCTaGGCGAAGACCTTGGTGGTTTCGAAGTTGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALPADRNRSARR*AKTLVVSKLWL Trigger: CAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGTCAGCAGGCAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 90 bp | CTGCCTGCTGACAGGAATCGCTCAGCTAGGCGCTTGGCGAAGACCTaGGTGGTTTCGAAGTTGTGGCTGCCGACACTGGCTGAGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPADRNRSARRLAKT*VVSKLWLPTLAELS Trigger: AGACAGCTCAGCCAGTGTCGGCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGTCAGCAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 90 bp | TGGAGACTGTCTGGTAGAGTACGCCACGTAGCAGGGCCTGGTAGTTaGGTACACGGAATAGGTGGCGCTCGCCAAAGGCCACGTCGTACT | + |
|
Preference number: 6 (lower is better) Translates to: WRLSGRVRHVAGPGS*VHGIGGARQRPRRT Trigger: AGTACGACGTGGCCTTTGGCGAGCGCCACCTATTCCGTGTACCAAACTACCAGGCCCTGCTACGTGGCGTACTCTACCAGACAGTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | ATAGATCCACAGGGCAGTCTTGGAAGGCAATCGCTTTaGAGCCCTGGATGTCCTGTGTGGCCACCCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IDPQGSLGRQSL*SPGCPVWPPSR Trigger: CCTGCTGGGTGGCCACACAGGACATCCAGGGCTCCAAAGCGATTGCCTTCCAAGACTGCCCTGTGGATCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | GATGATATCCAGGATCTCACACTCATCTGGCCCAGGTaGTCCCACATGTCCTGGAGGTCCCTGGGGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DDIQDLTLIWPR*SHMSWRSLGSF Trigger: GAAGGACCCCAGGGACCTCCAGGACATGTGGGACCACCTGGGCCAGATGAGTGTGAGATCCTGGATATCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | GTGGCTGTACTGTACCACGCCCGCGTGAGACTGCCCTaGCTCAAATTTGACCAGCTCATCCTTGCTCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: VAVLYHARVRLP*LKFDQLILAQP Trigger: CGGTTGAGCAAGGATGAGCTGGTCAAATTTGAGCCAGGGCAGTCTCACGCGGGCGTGGTACAGTACAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | ACAGGAATCGCTCAGCTAGGCGCTTGGCGAAGACCTTaGTGGTTTCGAAGTTGTGGCTGCCGACACTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TGIAQLGAWRRP*WFRSCGCRHWL Trigger: CAGCCAGTGTCGGCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | TCAGAACGTCCATCCGTAATGACCAGGGCAATTCGGTaGTTCTGTGTGGGTGGGAGTAGCCGGTCCCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SERPSVMTRAIR*FCVGGSSRSRV Trigger: CACCCGGGACCGGCTACTCCCACCCACACAGAACAACCGAATTGCCCTGGTCATTACGGATGGACGTTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | GACAGGAATCGCTCAGCTAGGCGCTTGGCGAAGACCTaGGTGGTTTCGAAGTTGTGGCTGCCGACACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DRNRSARRLAKT*VVSKLWLPTLA Trigger: AGCCAGTGTCGGCAGCCACAACTTCGAAACCACCAAGGTCTTCGCCAAGCGCCTAGCTGAGCGATTCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | TCTGGTAGAGTACGCCACGTAGCAGGGCCTGGTAGTTaGGTACACGGAATAGGTGGCGCTCGCCAAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGRVRHVAGPGS*VHGIGGARQRP Trigger: TGGCCTTTGGCGAGCGCCACCTATTCCGTGTACCAAACTACCAGGCCCTGCTACGTGGCGTACTCTACCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 90 bp | AGCACGAAGAATAGATCCACAGGGCAGTCTTGGAAGGCAATCGCTTaGGAGCCCTGGATGTCCTGTGTGGCCACCCAGCAGGCTTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: STKNRSTGQSWKAIA*EPWMSCVATQQACS Trigger: GCTACAAGCCTGCTGGGTGGCCACACAGGACATCCAGGGCTCCAAAGCGATTGCCTTCCAAGACTGCCCTGTGGATCTATTCTTCGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 90 bp | ACCTCTTCTGCATCGCGGCTATGCCCCCAGTCAGCTGCCGTGAAATaGCGCCGGTATGTGTGGTCTGTGGCAATGATACTTAGACGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSASRLCPQSAAVK*RRYVWSVAMILRRG Trigger: GCCACGTCTAAGTATCATTGCCACAGACCACACATACCGGCGCAATTTCACGGCAGCTGACTGGGGGCATAGCCGCGATGCAGAAGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS TCA 72 bp | TGCATCTGGTTGTGGCTGTACTGTACCACGCCCGCGTaGGACTGCCCTGGCTCAAATTTGACCAGCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: CIWLWLYCTTPA*DCPGSNLTSSS Trigger: GGATGAGCTGGTCAAATTTGAGCCAGGGCAGTCTCACGCGGGCGTGGTACAGTACAGCCACAACCAGATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS TCA 72 bp | GCACCACAGAGCACACTGAGAGGTGTCGTGTCCCGTTaGGTGTCAGAACGTCCATCCGTAATGACCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: APQSTLRGVVSR*VSERPSVMTRA Trigger: TGCCCTGGTCATTACGGATGGACGTTCTGACACTCAACGGGACACGACACCTCTCAGTGTGCTCTGTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS GCA 72 bp | CACTGTAGTGCAGCGCACCCGCATTCCAAACCAGGTTaGGGTCACACCGGTAGTACCTGTCTCTCAGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HCSAAHPHSKPG*GHTGSTCLSGC Trigger: ACAACCTGAGAGACAGGTACTACCGGTGTGACCGCAACCTGGTTTGGAATGCGGGTGCGCTGCACTACAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS GCA 72 bp | CACAATGGTGTCAATGGTCTGGCTGATGACCTCTTCTaGATCGCGGCTATGCCCCCAGTCAGCTGCCGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HNGVNGLADDLF*IAAMPPVSCRE Trigger: TTCACGGCAGCTGACTGGGGGCATAGCCGCGATGCAGAAGAGGTCATCAGCCAGACCATTGACACCATTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | CCCCAGTCAGCTGCCGTGAAATTGCGCCGGTATGTGTaGTCTGTGGCAATGATACTTAGACGTGGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQSAAVKLRRYV*SVAMILRRGSR Trigger: CCTGGAGCCACGTCTAAGTATCATTGCCACAGACCACACATACCGGCGCAATTTCACGGCAGCTGACTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | AATAGATCCACAGGGCAGTCTTGGAAGGCAATCGCTTaGGAGCCCTGGATGTCCTGTGTGGCCACCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NRSTGQSWKAIA*EPWMSCVATQQ Trigger: CTGCTGGGTGGCCACACAGGACATCCAGGGCTCCAAAGCGATTGCCTTCCAAGACTGCCCTGTGGATCTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | TCTAGAGGATGCCCGTCGGTCACCACGATCAAGTACTaGTTCTCCTTCAGGTGGGAGCCCCCTATGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRGCPSVTTIKY*FSFRWEPPMSS Trigger: GCTGCTCATAGGGGGCTCCCACCTGAAGGAGAACAAGTACTTGATCGTGGTGACCGACGGGCATCCTCTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | GCATCGCGGCTATGCCCCCAGTCAGCTGCCGTGAAATaGCGCCGGTATGTGTGGTCTGTGGCAATGATACTT | + |
|
Preference number: 6 (lower is better) Translates to: ASRLCPQSAAVK*RRYVWSVAMIL Trigger: AAGTATCATTGCCACAGACCACACATACCGGCGCAATTTCACGGCAGCTGACTGGGGGCATAGCCGCGATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | TGCACCACAGAGCACACTGAGAGGTGTCGTGTCCCGTaGAGTGTCAGAACGTCCATCCGTAATGACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CTTEHTERCRVP*SVRTSIRNDQG Trigger: GCCCTGGTCATTACGGATGGACGTTCTGACACTCAACGGGACACGACACCTCTCAGTGTGCTCTGTGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS TCA 72 bp | TGCACAGCCTTCTCAATGGCCTCTGCTGTGGCCCCCTaGGAGTTGCCGTCTGAAAACAACAGCACTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CTAFSMASAVAP*ELPSENNSTLF Trigger: GAAGAGAGTGCTGTTGTTTTCAGACGGCAACTCTCAGGGGGCCACAGCAGAGGCCATTGAGAAGGCTGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS GCA 72 bp | CCTTCTCAATGGCCTCTGCTGTGGCCCCCTGAGAGTTaGCGTCTGAAAACAACAGCACTCTCTTCTTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSQWPLLWPPES*RLKTTALSSWW Trigger: CCACCAAGAAGAGAGTGCTGTTGTTTTCAGACGGCAACTCTCAGGGGGCCACAGCAGAGGCCATTGAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS TCA 72 bp | GCTGGTCGGAGCCCGCCACAAAGCCAAACACATCCTTaGTTCCCACAGAAACTACCTGAATGTCTGCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGRSPPQSQTHP*FPQKLPECLHH Trigger: GTGGTGCAGACATTCAGGTAGTTTCTGTGGGAATCAAGGATGTGTTTGGCTTTGTGGCGGGCTCCGACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | GTGTCGAGCACGAAGAATAGATCCACAGGGCAGTCTTaGAAGGCAATCGCTTTGGAGCCCTGGATGTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VSSTKNRSTGQS*KAIALEPWMSC Trigger: ACAGGACATCCAGGGCTCCAAAGCGATTGCCTTCCAAGACTGCCCTGTGGATCTATTCTTCGTGCTCGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 90 bp | TGGTCAGGTGTGATGGCCACAGAAAAGACCTTGATGCCCAGGTGTTaGGCCTCATTTACTGCATCTTCCAGACCCCCGCATGGTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WSGVMATEKTLMPRC*ASFTASSRPPHGSL Trigger: CAAGGAACCATGCGGGGGTCTGGAAGATGCAGTAAATGAGGCCAAACACCTGGGCATCAAGGTCTTTTCTGTGGCCATCACACCTGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 90 bp | GAGATACCTGGCCGACCTTGCGATAAGCCTTGGCAGGAAATGACATaGAGCTGGTCGGAGCCCGCCACAAAGCCAAACACATCCTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: EIPGRPCDKPWQEMT*SWSEPATKPNTSLI Trigger: AATCAAGGATGTGTTTGGCTTTGTGGCGGGCTCCGACCAGCTCAATGTCATTTCCTGCCAAGGCTTATCGCAAGGTCGGCCAGGTATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS TCA 72 bp | CAGAAACTACCTGAATGTCTGCACCACAGAGCACACTaGGAGGTGTCGTGTCCCGTTGAGTGTCAGAACGTC | + |
|
Preference number: 6 (lower is better) Translates to: QKLPECLHHRAH*EVSCPVECQNV Trigger: GACGTTCTGACACTCAACGGGACACGACACCTCTCAGTGTGCTCTGTGGTGCAGACATTCAGGTAGTTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS GCA 72 bp | CACATCCTTGATTCCCACAGAAACTACCTGAATGTCTaGACCACAGAGCACACTGAGAGGTGTCGTGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: HILDSHRNYLNV*TTEHTERCRVP Trigger: CGGGACACGACACCTCTCAGTGTGCTCTGTGGTGCAGACATTCAGGTAGTTTCTGTGGGAATCAAGGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | AGTTGCCGTCTGAAAACAACAGCACTCTCTTCTTGGTaGCACCTGACGAGGCTTCCCGGTAGAAACGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCRLKTTALSSW*HLTRLPGRNES Trigger: TGACTCGTTTCTACCGGGAAGCCTCGTCAGGTGCCACCAAGAAGAGAGTGCTGTTGTTTTCAGACGGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | TCCAGGTGGTCAGGTGTGATGGCCACAGAAAAGACCTaGATGCCCAGGTGTTTGGCCTCATTTACTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SRWSGVMATEKT*MPRCLASFTAS Trigger: AGATGCAGTAAATGAGGCCAAACACCTGGGCATCAAGGTCTTTTCTGTGGCCATCACACCTGACCACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS TCA 72 bp | AAGCCAAACACATCCTTGATTCCCACAGAAACTACCTaGATGTCTGCACCACAGAGCACACTGAGAGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KPNTSLIPTETT*MSAPQSTLRGV Trigger: GACACCTCTCAGTGTGCTCTGTGGTGCAGACATTCAGGTAGTTTCTGTGGGAATCAAGGATGTGTTTGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 90 bp | CCCTGGAGGTCCTCTGGCAGCCTGGCACTCAAAAGAACAACACACTaGTTCCACGTTATTTTTAATCATGTCCACAATGGTGTCAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: PWRSSGSLALKRTTH*FHVIFNHVHNGVNG Trigger: ACCATTGACACCATTGTGGACATGATTAAAAATAACGTGGAACAAGTGTGTTGTTCTTTTGAGTGCCAGGCTGCCAGAGGACCTCCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 90 bp | GGCTCAAATTTGACCAGCTCATCCTTGCTCAACCGGTCAATGACCTaGATGATGAAGTCCTTGGCAATCTCAAAGTTCTGTAGGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: GSNLTSSSLLNRSMT*MMKSLAISKFCRPM Trigger: CATTGGCCTACAGAACTTTGAGATTGCCAAGGACTTCATCATCAAGGTCATTGACCGGTTGAGCAAGGATGAGCTGGTCAAATTTGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CCA 72 bp | TTATTTTTAATCATGTCCACAATGGTGTCAATGGTCTaGCTGATGACCTCTTCTGCATCGCGGCTATGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LFLIMSTMVSMV*LMTSSASRLCP Trigger: GGGGCATAGCCGCGATGCAGAAGAGGTCATCAGCCAGACCATTGACACCATTGTGGACATGATTAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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| CDS CAA 72 bp | TTGACCAGCTCATCCTTGCTCAACCGGTCAATGACCTaGATGATGAAGTCCTTGGCAATCTCAAAGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LTSSSLLNRSMT*MMKSLAISKFC Trigger: ACAGAACTTTGAGATTGCCAAGGACTTCATCATCAAGGTCATTGACCGGTTGAGCAAGGATGAGCTGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
||
| CDS CAA 72 bp | TCCTCTGGCAGCCTGGCACTCAAAAGAACAACACACTaGTTCCACGTTATTTTTAATCATGTCCACAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSGSLALKRTTH*FHVIFNHVHNG Trigger: ACCATTGTGGACATGATTAAAAATAACGTGGAACAAGTGTGTTGTTCTTTTGAGTGCCAGGCTGCCAGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001147.5 |
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