Pregenerated sensors for COL5A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026042Ensembl transcript IDs: ENSMUST00000086430.5
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTGAAGGATAAGGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTaGTGCAGGACCAGCCATTACTTCAAGAGTCTCAGGATGAACTTT | + |
Preference number: 1 (lower is better) Translates to: LKDKVVRHFRSYVQS*CRTSHYFKSLRMNF Trigger: AAAGTTCATCCTGAGACTCTTGAAGTAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACCTTATCCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR CCA 90 bp | TTCAAGAGTCTCAGGATGAACTTTAAACAGTCACAGTTCTTGTGGTaGTCATTGATGGTAGTGCTCATTGTCGATATGTCTGGGCTTCTG | + |
Preference number: 1 (lower is better) Translates to: FKSLRMNFKQSQFLW*SLMVVLIVDMSGLL Trigger: CAGAAGCCCAGACATATCGACAATGAGCACTACCATCAATGACCACCACAAGAACTGTGACTGTTTAAAGTTCATCCTGAGACTCTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR CCA 90 bp | TACTTCAAGAGTCTCAGGATGAACTTTAAACAGTCACAGTTCTTGTaGTGGTCATTGATGGTAGTGCTCATTGTCGATATGTCTGGGCTT | + |
Preference number: 1 (lower is better) Translates to: YFKSLRMNFKQSQFL*WSLMVVLIVDMSGL Trigger: AAGCCCAGACATATCGACAATGAGCACTACCATCAATGACCACCACAAGAACTGTGACTGTTTAAAGTTCATCCTGAGACTCTTGAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR CCA 90 bp | TCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTaGGTCATATTTTCTTATGAATGTTCTAATTCCAATCCTCACATT | + |
Preference number: 1 (lower is better) Translates to: SIPACRDEVGHAKKC*VIFSYECSNSNPHI Trigger: AATGTGAGGATTGGAATTAGAACATTCATAAGAAAATATGACCCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR-3UTR TCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTATCAAGAGTCTCAGGATaGACTTTAAACAGTCACAGT | + |
Preference number: 2 (lower is better) Translates to: GGQALQIVCTKLMQDQPLSRVSG*TLNSHS Trigger: ACTGTGACTGTTTAAAGTTCATCCTGAGACTCTTGA...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR-3UTR TCA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTTATGCTTCAGGAAAATaGGACTGTGACTGTGGGAGA | + |
Preference number: 2 (lower is better) Translates to: IHDQSSMWALSFGMAQIIYASGK*DCDCGR Trigger: TCTCCCACAGTCACAGTCTCATTTTCCTGAAGCATA...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR-3UTR CCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCACAGTCACAGTTCTTGTaGTGGTCATTGATGGTAGTG | + |
Preference number: 2 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSQSQFL*WSLMVV Trigger: CACTACCATCAATGACCACCACAAGAACTGTGACTG...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR-3UTR CCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGTCACAGTTCTTGTGGTaGTCATTGATGGTAGTGCTC | + |
Preference number: 2 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLSQFLW*SLMVVL Trigger: GAGCACTACCATCAATGACCACCACAAGAACTGTGA...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR-3UTR TCA 90 bp | TTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTGTCCGTCTTCATTTGTCACTaGTGTTCTGACAATAAGAGG | + |
Preference number: 2 (lower is better) Translates to: LIRCFAEIHDQSSMWALSVFICH*CSDNKR Trigger: CCTCTTATTGTCAGAACATCAGTGACAAATGAAGAC...GGACAAGGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR-3UTR GCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGAAATCTATCCCAGCTTaGAGAGATGAGGTAGGTCAT | + |
Preference number: 2 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWKSIPA*RDEVGH Trigger: ATGACCTACCTCATCTCTGCAAGCTGGGATAGATTT...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR-3UTR CCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCGCCTATCTCCAGTCTTaGAATAACAACAGAAGCATA | + |
Preference number: 2 (lower is better) Translates to: MHLIRCFAEIHDQSSMWAAYLQS*NNNRSI Trigger: TATGCTTCTGTTGTTATTCCAAGACTGGAGATAGGC...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR TCA 72 bp | AAGGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTaGTGCAGGACCAGCCATTACTTCAAGAGTCTCAGG | + |
Preference number: 3 (lower is better) Translates to: KVVRHFRSYVQS*CRTSHYFKSLR Trigger: CCTGAGACTCTTGAAGTAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR TCA 72 bp | GATGCAGGACCAGCCATTACTTCAAGAGTCTCAGGATaGACTTTAAACAGTCACAGTTCTTGTGGTGGTCAT | + |
Preference number: 3 (lower is better) Translates to: DAGPAITSRVSG*TLNSHSSCGGH Trigger: ATGACCACCACAAGAACTGTGACTGTTTAAAGTTCATCCTGAGACTCTTGAAGTAATGGCTGGTCCTGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR CCA 72 bp | CTCAGGATGAACTTTAAACAGTCACAGTTCTTGTGGTaGTCATTGATGGTAGTGCTCATTGTCGATATGTCT | + |
Preference number: 3 (lower is better) Translates to: LRMNFKQSQFLW*SLMVVLIVDMS Trigger: AGACATATCGACAATGAGCACTACCATCAATGACCACCACAAGAACTGTGACTGTTTAAAGTTCATCCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR-3UTR CAA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGTTCTTGTGGTGGTCATaGATGGTAGTGCTCATTGTC | + |
Preference number: 3 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLFLWWS*MVVLIV Trigger: GACAATGAGCACTACCATCAATGACCACCACAAGAA...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTAGTGCCCAGGAGGCCCTaGAGCACCTGGCTGACCAGG | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLVPRRP*STWLTR Trigger: CCTGGTCAGCCAGGTGCTCCAGGGCCTCCTGGGCAC...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTAGGTCCAGGAAGTCCCTaGAAGCCAGTGGGGCCTGGA | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLGPGSP*KPVGPG Trigger: TCCAGGCCCCACTGGCTTTCAGGGACTTCCTGGACC...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCTTCTCCTGCGGGCCCTaGAGGTCCTGGAGCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSFSCGP*RSWSSS Trigger: GCTGGAGCTCCAGGACCTGCAGGGCCCGCAGGAGAA...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGGGTCCAGTACTGCCTTaGGGGCCAGGAGACCCAGGG | + |
Preference number: 4 (lower is better) Translates to: STHAEALHTPSCKLPARKGPVLP*GPGDPG Trigger: CCCTGGGTCTCCTGGCCCTCAAGGCAGTACTGGACC...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTAACCAGGTGGGCCAGCTaGTCCTCTATCTCCCACTCG | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLTRWAS*SSISHS Trigger: CGAGTGGGAGATAGAGGACCAGCTGGCCCACCTGGT...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGCACGAGAACCAGGATTaGCACGGGAGCCAGGAGGGC | + |
Preference number: 4 (lower is better) Translates to: STHAEALHTPSCKLPARKHENQD*HGSQEG Trigger: GCCCTCCTGGCTCCCGTGGCAATCCTGGTTCTCGTG...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCGCTACCTTTGGGGCCTaGAAGGCCCATGCTTCCAGG | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSATFGA*KAHASR Trigger: CCTGGAAGCATGGGCCTTCCAGGCCCCAAAGGTAGC...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCCCCTGTAGCACCAGGTaGACCCTGGGTTCCTCTACC | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSPCSTR*TLGSST Trigger: GGTAGAGGAACCCAGGGTCCACCTGGTGCTACAGGG...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCTCCTGGGCTACCAGGTaGGCCAGCTGGTCCTCTATC | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSSWATR*ASWSSI Trigger: GATAGAGGACCAGCTGGCCCACCTGGTAGCCCAGGA...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCAGGTCCCACAGGGCCTaGAGGACCAACTTCTCCATC | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSRSHRA*RTNFSI Trigger: GATGGAGAAGTTGGTCCTTCAGGCCCTGTGGGACCT...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGGGTCCAGGAAGACCCTaGAGGCCAGTGAACCCTCTG | + |
Preference number: 4 (lower is better) Translates to: STHAEALHTPSCKLPARKGPGRP*RPVNPL Trigger: CAGAGGGTTCACTGGCCTGCAGGGTCTTCCTGGACC...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTACTGACCAGGCACACCTaGCTCTCCATCAATTCCCTG | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLLTRHT*LSINSL Trigger: CAGGGAATTGATGGAGAGCCAGGTGTGCCTGGTCAG...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGACCCTGAGAGCCAGCTaGACCAGGTGGCCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: STHAEALHTPSCKLPARKTLRAS*TRWPSF Trigger: GAAACTGGGCCACCTGGTCCAGCTGGCTCTCAGGGT...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAGCCTGTGGGGCCTTTaGCGCCAGGTGTACCATCAG | + |
Preference number: 4 (lower is better) Translates to: STHAEALHTPSCKLPARKSLWGL*RQVYHQ Trigger: CTGATGGTACACCTGGCGCCAAAGGCCCCACAGGCT...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCAGGACCAACTGTGCCTaGATCACCCCGAGGACCTCT | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSRTNCA*ITPRTS Trigger: AGAGGTCCTCGGGGTGATCCAGGCACAGTTGGTCCT...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTAGCCCCTTTCTCCCATTaGTCCTGGAGGACCAACTGT | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLAPFSH*SWRTNC Trigger: ACAGTTGGTCCTCCAGGACCAATGGGAGAAAGGGGC...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTAAGCACCATCCCGTCCTaGGGTACCATCATTACCAGC | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLSTIPS*GTIITS Trigger: GCTGGTAATGATGGTACCCCAGGACGGGATGGTGCT...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCCCATCAGGTCCTGGGTaGGAGGGGTGCCCAGGAGGC | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWAPSGPG*EGCPGG Trigger: GCCTCCTGGGCACCCCTCTCACCCAGGACCTGATGG...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCAGACCCAGGGGGCCCTaGCAAGCCAGGAGGGCCAGA | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWARPRGP*QARRAR Trigger: TCTGGCCCTCCTGGCTTGGCAGGGCCCCCTGGGTCT...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGCCTGAGGTCCAGTACTaGCTTGAGGGCCAGGAGACC | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWPEVQY*LEGQET Trigger: GGTCTCCTGGCCCTCAAGGCAGTACTGGACCTCAGG...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCACTTCCCAGGTTCTCCTaGGGGCCCTGCAGGTCCTGG | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSLPRFS*GPCRSW Trigger: CCAGGACCTGCAGGGCCCGCAGGAGAACCTGGGAAG...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCAAGGCCCTGGAGCACCTaGCTGACCAGGCACACCTGG | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSRPWST*LTRHTW Trigger: CCAGGTGTGCCTGGTCAGCCAGGTGCTCCAGGGCCT...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCATCCGGGCTTCCCAGGTaGGCCCTCTGGTCCACGAGA | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSSGLPR*ALWSTR Trigger: TCTCGTGGACCAGAGGGCCCACCTGGGAAGCCCGGA...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGTCCAGGAGCACCCTGTaGCCCAAGTCTTCCCCTCTC | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWSRSTL*PKSSPL Trigger: GAGAGGGGAAGACTTGGGCCACAGGGTGCTCCTGGA...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCAAGCTCCAGCAGGGCCTaGAGGCCCAACTCTGCCAGC | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSSSSRA*RPNSAS Trigger: GCTGGCAGAGTTGGGCCTCCAGGCCCTGCTGGAGCT...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCACCAGGAGGTCCAATTaGTCCAAGTGGCCCAGGGTT | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSTRRSN*SKWPRV Trigger: AACCCTGGGCCACTTGGACCAATTGGACCTCCTGGT...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCACCAGGAGGACCCTCTaGTCCTGCTTCTCCTACACT | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSTRRTL*SCFSYT Trigger: AGTGTAGGAGAAGCAGGACCAGAGGGTCCTCCTGGT...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCTGTCCTTGTAAACCCTaGGGTCCTCTTGGGCCAACA | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSCPCKP*GPLGPT Trigger: TGTTGGCCCAAGAGGACCTCAGGGTTTACAAGGACA...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | TTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTGTCCTCTCCTGGCATGCCCTaGAGACCTGGTGGCCCTGTG | + |
Preference number: 4 (lower is better) Translates to: LIRCFAEIHDQSSMWALSSPGMP*RPGGPV Trigger: CACAGGGCCACCAGGTCTTCAGGGCATGCCAGGAGA...GGACAAGGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCGTTTCCTTCCTTTCCTaGAGGACCTACTGGTCCTGG | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSVSFLS*RTYWSW Trigger: CCAGGACCAGTAGGTCCTTCAGGAAAGGAAGGAAAC...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTAAATGAGGAGAGGTCTTaGTCCCACCCAGTTTGCCAT | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLNEERS*SHPVCH Trigger: ATGGCAAACTGGGTGGGAGCAAGACCTCTCCTCATT...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGAAGCCCAGGTTCTCCTaGACGTCCTGGATCTCCCTG | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWKPRFS*TSWISL Trigger: CAGGGAGATCCAGGACGTCCAGGAGAACCTGGGCTT...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGGCCCTGTGTCTCCAATaGTCCCAGTTGGACCTGGGT | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWALCLQ*SQLDLG Trigger: ACCCAGGTCCAACTGGGACCATTGGAGACACAGGGC...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGAGGGCCTGCAGGACCTaGAGGTCCCAAGGGACCTGG | + |
Preference number: 4 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWRACRT*RSQGTW Trigger: CCAGGTCCCTTGGGACCTCCAGGTCCTGCAGGCCCT...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTTCCAGCTCGACCAGGTaGTCCTACAGGGCCTCGAGA | + |
Preference number: 4 (lower is better) Translates to: IHDQSSMWALSFGMAQIISSSTR*SYRASR Trigger: TCTCGAGGCCCTGTAGGACCACCTGGTCGAGCTGGA...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTATCCAATTGGTCCAAGTaGCCCAGGGTTTCCTTCCTT | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLSNWSK*PRVSFL Trigger: AAGGAAGGAAACCCTGGGCCACTTGGACCAATTGGA...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCTGTCAGGGGATTTGCTaGCCCACCAGGTTTTACGTG | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSCQGIC*PTRFYV Trigger: CACGTAAAACCTGGTGGGCCAGCAAATCCCCTGACA...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGTCTCCCACTCGCCCATaGGAGCCAGGGTCACCACGA | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLSPTRP*EPGSPR Trigger: TCGTGGTGACCCTGGCTCTCATGGGCGAGTGGGAGA...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGGTTCCAGGGGCACCCTaGGAGCCTGGTAGACCAGCA | + |
Preference number: 4 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWVPGAP*EPGRPA Trigger: TGCTGGTCTACCAGGCTCTCAGGGTGCCCCTGGAAC...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCCTCACCAGGAGGTCCTaGGGGTCCCACACCACCTTG | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWALTRRS*GSHTTL Trigger: CAAGGTGGTGTGGGACCCGCAGGACCTCCTGGTGAG...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCCATTCCAGGATTTCCTaGAAAACCGGAAGAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSHSRIS*KTGRAR Trigger: CCTGGCTCTTCCGGTTTTCCAGGAAATCCTGGAATG...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTCCTGCAGAGCCTGTaGGGCCTTTGGCGCCAGGTG | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWAFLQSL*GLWRQV Trigger: CACCTGGCGCCAAAGGCCCCACAGGCTCTGCAGGAA...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGACCCTGAATACCATGTaGCCCTGGTTCTCCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: STHAEALHTPSCKLPARKTLNTM*PWFSLW Trigger: CCAAAGGGAGAACCAGGGCCACATGGTATTCAGGGT...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGTTCTCCTGGACGTCCTaGATCTCCCTGGCCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWFSWTS*ISLASF Trigger: AAAGGAGGCCAGGGAGATCCAGGACGTCCAGGAGAA...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCCAGACCCCGAGCACCTaGAAGCCCAGGTTCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWAQTPST*KPRFSW Trigger: CCAGGAGAACCTGGGCTTCCAGGTGCTCGGGGTCTG...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGTCCAATGGTCCCAGTTaGACCTGGGTTGCCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWSNGPS*TWVALW Trigger: CCAAAGGGCAACCCAGGTCCAACTGGGACCATTGGA...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGACCAGGAGGACCATCTaGACCAGGTTGTCCATCTTC | + |
Preference number: 4 (lower is better) Translates to: STHAEALHTPSCKLPARKTRRTI*TRLSIF Trigger: GAAGATGGACAACCTGGTCCAGATGGTCCTCCTGGT...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGAGGACCATTGGAACCTaGAGGTCCTACAGGTCCAGG | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWRTIGT*RSYRSR Trigger: CCTGGACCTGTAGGACCTCCAGGTTCCAATGGTCCT...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | TTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTGTCCAGAGCAGCAGTAAGATaGCCAGGGGGACCTGGAGGG | + |
Preference number: 4 (lower is better) Translates to: LIRCFAEIHDQSSMWALSRAAVR*PGGPGG Trigger: CCCTCCAGGTCCCCCTGGCCATCTTACTGCTGCTCT...GGACAAGGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTTCTCCATCAATTCCCTaGGGACCACGAGGACCAGGT | + |
Preference number: 4 (lower is better) Translates to: IHDQSSMWALSFGMAQIISPSIP*GPRGPG Trigger: ACCTGGTCCTCGTGGTCCTCAGGGAATTGATGGAGA...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTAGGCATGAGTCCTACTTaGCTTCCAAGTCCAGATTTT | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLGMSPT*LPSPDF Trigger: AAAATCTGGACTTGGAAGTCAAGTAGGACTCATGCC...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCGACCCTGCAGGCCAGTaGACCCTCTGTGGCCTTTCT | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWADPAGQ*TLCGLS Trigger: AGAAAGGCCACAGAGGGTTCACTGGCCTGCAGGGTC...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTCCCGAGGACCTCTTTTaGCTTCTTCACCAGGTGGAC | + |
Preference number: 4 (lower is better) Translates to: IHDQSSMWALSFGMAQIIPEDLF*LLHQVD Trigger: GTCCACCTGGTGAAGAAGGCAAAAGAGGTCCTCGGG...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGCTGGAGGACCAACTGTaGCTGGATCACCCCGAGGAC | + |
Preference number: 4 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWLEDQL*LDHPED Trigger: GTCCTCGGGGTGATCCAGGCACAGTTGGTCCTCCAG...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | TTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTCTCCAGTAGGGCCTaGAGGACCTGGAGGTCCCAA | + |
Preference number: 4 (lower is better) Translates to: LIRCFAEIHDQSSMWALSFSSRA*RTWRSQ Trigger: TTGGGACCTCCAGGTCCTGCAGGCCCTACTGGAGAA...GGACAAGGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGCTGCTTCTCCTACACTaGCCCGCACACCAGGAGGTC | + |
Preference number: 4 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWLLLLH*PAHQEV Trigger: GACCTCCTGGTGTGCGGGGCAGTGTAGGAGAAGCAG...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGAGGACCCTCTGGTCCTaGTTCTCCTACACTGCCCCG | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLRTLWS*FSYTAP Trigger: CGGGGCAGTGTAGGAGAAGCAGGACCAGAGGGTCCT...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGGCCCATAGCACCCATTaGACCAGTGGGGCCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWAHSTH*TSGASF Trigger: GAAGCTGGCCCCACTGGTCCAATGGGTGCTATGGGC...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCTTCTCCTTTGAAACCTaGAACTCCTGGATCACCCGA | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSFSFET*NSWITR Trigger: TCGGGTGATCCAGGAGTTCCAGGTTTCAAAGGAGAA...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGCACCACTGCTACCTTTaGGGCCTGGAAGGCCCATGC | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLHHCYL*GLEGPC Trigger: GCATGGGCCTTCCAGGCCCCAAAGGTAGCAGTGGTG...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGGATCCTGCTAGCCCTTaGGGTCCAGGAGACCCAGCA | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLDPASP*GPGDPA Trigger: TGCTGGGTCTCCTGGACCCCAAGGGCTAGCAGGATC...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGTCCTTGTTCACCATTTaGACCAGGAGGTCCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: STHAEALHTPSCKLPARKSLFTI*TRRSRK Trigger: CTTCCTGGACCTCCTGGTCCAAATGGTGAACAAGGA...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGCCCAGCCATCTGAGCTaGAAAAGGCCTGCTCATGCC | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLPSHLS*KRPAHA Trigger: GGCATGAGCAGGCCTTTTTCAGCTCAGATGGCTGGG...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCACTGGAAAACCACGATTaGCAGGAGCGCCCCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSLENHD*QERPFL Trigger: GAGAAAGGGGCGCTCCTGGCAATCGTGGTTTTCCAG...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | CTCTCAAATGGGATGTTTAACAGTTCTGTGTTCACAAATAGCATTGATGAAACAGGGCCTGGAGGTCCCTaGTCTCCTCTTTCCCCAGCT | + |
Preference number: 4 (lower is better) Translates to: LSNGMFNSSVFTNSIDETGPGGP*SPLSPA Trigger: AGCTGGGGAAAGAGGAGAGCAGGGACCTCCAGGCCC...TGTTTCATCAATGCTATTTGTGAACACAGAACTGTTAAACATCCCATTTGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGCTCTTTCTCCTGGCATaGCCTGAAGACCTGGTGGCC | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLLFLLA*PEDLVA Trigger: GGCCACCAGGTCTTCAGGGCATGCCAGGAGAAAGAG...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGCGAAAGGACCAGGAATaGCAGCACTTCCTTGTTCAC | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWRKDQE*QHFLVH Trigger: GTGAACAAGGAAGTGCTGGCATTCCTGGTCCTTTCG...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTCCTGGCATTCCTCTTaGTCCCAGAGGGCCCATAGC | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWASWHSS*SQRAHS Trigger: GCTATGGGCCCTCTGGGACCAAGAGGAATGCCAGGA...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTGAAACCTGGAACTCCTaGATCACCCGATTGTCCTCG | + |
Preference number: 4 (lower is better) Translates to: IHDQSSMWALSFGMAQIIETWNS*ITRLSS Trigger: CGAGGACAATCGGGTGATCCAGGAGTTCCAGGTTTC...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGACCTGGGTTGCCCTTTaGACCATCAGGGCCATGTCC | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLTWVAL*TIRAMS Trigger: GGACATGGCCCTGATGGTCCAAAGGGCAACCCAGGT...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCGGTCCCAGTTGGACCTaGGTTGCCCTTTGGACCATC | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWAGPSWT*VALWTI Trigger: GATGGTCCAAAGGGCAACCCAGGTCCAACTGGGACC...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTCCTCTTTGCCCAGTaGTACCAGCGGGACCAGGAG | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWAFLFAQ*YQRDQE Trigger: CTCCTGGTCCCGCTGGTACCACTGGGCAAAGAGGAA...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGCATCATAGTGTCCCATaGTATCACCAAGAGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWHHSVP*YHQEQQ Trigger: CTGCTGCTCTTGGTGATATCATGGGACACTATGATG...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | GATCTTAGTTTTCACTCCTGGAAACTAAAAGGACCTAATATGTTCAAAGGATTCAGGGCCAGAGGTTCCTaGAGAGCCTGTGGGGCCTTT | + |
Preference number: 4 (lower is better) Translates to: DLSFHSWKLKGPNMFKGFRARGS*RACGAF Trigger: AAAGGCCCCACAGGCTCTGCAGGAACCTCTGGCCCT...GAATCCTTTGAACATATTAGGTCCTTTTAGTTTCCAGGAGTGAAAACTAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCAAGGGCCAGGTGTTCCTaGAATTCCTCTTTCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSRARCS*NSSFSW Trigger: CCAGGAGAAAGAGGAATTGCAGGAACACCTGGCCCT...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTTGCCCCGTCATTTCCTaGTGTTCCTTCAGCACCTTT | + |
Preference number: 4 (lower is better) Translates to: IHDQSSMWALSFGMAQIICPVIS*CSFSTF Trigger: AAAGGTGCTGAAGGAACAGCAGGAAATGACGGGGCA...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGACAGTTGAGCACCTCTaGGCACTCTATCTTGTCACA | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWTVEHL*ALYLVT Trigger: TGTGACAAGATAGAGTGCCCAGAGGTGCTCAACTGT...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGTTTCCAGGCATACCGTaGGCACCCCGTTTTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLFPGIP*APRFPG Trigger: TCCTGGAAAACGGGGTGCCCACGGTATGCCTGGAAA...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GATCTTAGTTTTCACTCCTGGAAACTAAAAGGACCTAATATGTTCAAAGGATTCACCAGCCGGACCTTCTaGCCCAGGTTCTCCTACAGG | + |
Preference number: 4 (lower is better) Translates to: DLSFHSWKLKGPNMFKGFTSRTF*PRFSYR Trigger: CCTGTAGGAGAACCTGGGCCAGAAGGTCCGGCTGGT...GAATCCTTTGAACATATTAGGTCCTTTTAGTTTCCAGGAGTGAAAACTAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGTTTGTTTGTGTCATCTaGAGCTGCCTGGTCTTCCGT | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWFVCVI*SCLVFR Trigger: ACGGAAGACCAGGCAGCTCCAGATGACACAAACAAA...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTACTCTGCTTTGTGGGATaGCAAAGCTTTAAATCATCA | + |
Preference number: 4 (lower is better) Translates to: GGQALQIVCTKLMQDQPLLCFVG*QSFKSS Trigger: TGATGATTTAAAGCTTTGCCATCCCACAAAGCAGAG...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | GATCTTAGTTTTCACTCCTGGAAACTAAAAGGACCTAATATGTTCAAAGGATTCGGACCAATGGGACCCTaGATACCATGTGGCCCTGGT | + |
Preference number: 4 (lower is better) Translates to: DLSFHSWKLKGPNMFKGFGPMGP*IPCGPG Trigger: ACCAGGGCCACATGGTATTCAGGGTCCCATTGGTCC...GAATCCTTTGAACATATTAGGTCCTTTTAGTTTCCAGGAGTGAAAACTAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGTTCCAAGGTCACCACTaGTACCTTTGGGGCCTGGAA | + |
Preference number: 4 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWFQGHH*YLWGLE Trigger: TTCCAGGCCCCAAAGGTAGCAGTGGTGACCTTGGAA...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCTCATTCTCTTGTTCCTaGGCTTTTATTGAGACACAG | + |
Preference number: 4 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSSFSCS*AFIETQ Trigger: CTGTGTCTCAATAAAAGCCCAGGAACAAGAGAATGA...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GATCTTAGTTTTCACTCCTGGAAACTAAAAGGACCTAATATGTTCAAAGGATTCTGGTCCTACTTTTCCTaGTGTACCCGCTGGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: DLSFHSWKLKGPNMFKGFWSYFS*CTRWAR Trigger: CCTGGCCCAGCGGGTACACCAGGAAAAGTAGGACCA...GAATCCTTTGAACATATTAGGTCCTTTTAGTTTCCAGGAGTGAAAACTAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGCTCCTACAGGACCATTaGAACCTGGAGGTCCTACAG | + |
Preference number: 4 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWLLQDH*NLEVLQ Trigger: CTGTAGGACCTCCAGGTTCCAATGGTCCTGTAGGAG...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CTCTCAAATGGGATGTTTAACAGTTCTGTGTTCACAAATAGCATTGATGAAACAAGGGCCTCGAGAACCTaGCTCTCCTCTTTGTCCTGC | + |
Preference number: 4 (lower is better) Translates to: LSNGMFNSSVFTNSIDETRASRT*LSSLSC Trigger: GCAGGACAAAGAGGAGAGCCAGGTTCTCGAGGCCCT...TGTTTCATCAATGCTATTTGTGAACACAGAACTGTTAAACATCCCATTTGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTTCACAGACACAGATCTaGCATGGAGAAGGTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: IHDQSSMWALSFGMAQIISQTQI*HGEGFQ Trigger: TTGGAAACCTTCTCCATGTCAGATCTGTGTCTGTGA...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTGATTGCATCTTCAGCTaGTCCCTGGTTAGGATCAAT | + |
Preference number: 4 (lower is better) Translates to: IHDQSSMWALSFGMAQIIDCIFS*SLVRIN Trigger: ATTGATCCTAACCAGGGATCAGCTGAAGATGCAATC...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGACCCTTAGCACCAGGTaGTCCAATTTCACCTTTGGG | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLTLSTR*SNFTFG Trigger: CCCAAAGGTGAAATTGGAGCACCTGGTGCTAAGGGT...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | CTCTCAAATGGGATGTTTAACAGTTCTGTGTTCACAAATAGCATTGATGAAACAACCATCAGTCCCCACTaGACCAGGAAGACCCTGAGA | + |
Preference number: 4 (lower is better) Translates to: LSNGMFNSSVFTNSIDETTISPH*TRKTLR Trigger: TCTCAGGGTCTTCCTGGTGCAGTGGGGACTGATGGT...TGTTTCATCAATGCTATTTGTGAACACAGAACTGTTAAACATCCCATTTGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | CTCTCAAATGGGATGTTTAACAGTTCTGTGTTCACAAATAGCATTGATGAAACACTCTCCTCTTTGTCCTaGATCTCCAGGGGCACCAAC | + |
Preference number: 4 (lower is better) Translates to: LSNGMFNSSVFTNSIDETLSSLS*ISRGTN Trigger: GTTGGTGCCCCTGGAGATGCAGGACAAAGAGGAGAG...TGTTTCATCAATGCTATTTGTGAACACAGAACTGTTAAACATCCCATTTGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR GCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCATATTGTCAGGGGATTTaGTGGCCCACCAGGTTTTAC | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSYCQGI*WPTRFY Trigger: GTAAAACCTGGTGGGCCAGCAAATCCCCTGACAATA...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GATCTTAGTTTTCACTCCTGGAAACTAAAAGGACCTAATATGTTCAAAGGATTCCATGCCCTGAAGACCTaGTGGCCCTGTGTCTCCAAT | + |
Preference number: 4 (lower is better) Translates to: DLSFHSWKLKGPNMFKGFHALKT*WPCVSN Trigger: ATTGGAGACACAGGGCCACCAGGTCTTCAGGGCATG...GAATCCTTTGAACATATTAGGTCCTTTTAGTTTCCAGGAGTGAAAACTAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGAATTCCTCTTTCTCCTaGCATGCCCTGAAGACCTGG | + |
Preference number: 4 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWNSSFS*HALKTW Trigger: CCAGGTCTTCAGGGCATGCCAGGAGAAAGAGGAATT...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCAACCAACAGCTCCAGTTaGACCATTTTCACCACGAGA | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSTNSSS*TIFTTR Trigger: TCTCGTGGTGAAAATGGTCCAACTGGAGCTGTTGGT...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTCACCGCTCTGCTTTGTaGGATGGCAAAGCTTTAAAT | + |
Preference number: 4 (lower is better) Translates to: IHDQSSMWALSFGMAQIIHRSAL*DGKALN Trigger: ATTTAAAGCTTTGCCATCCCACAAAGCAGAGCGGTG...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | GATCTTAGTTTTCACTCCTGGAAACTAAAAGGACCTAATATGTTCAAAGGATTCCCTTTGTGTCCTCTGTaGCCTTTCAAGCCAGGGAGA | + |
Preference number: 4 (lower is better) Translates to: DLSFHSWKLKGPNMFKGFPLCPL*PFKPGR Trigger: TCTCCCTGGCTTGAAAGGTCACAGAGGACACAAAGG...GAATCCTTTGAACATATTAGGTCCTTTTAGTTTCCAGGAGTGAAAACTAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGTCTCCATATGTGAACTaGGATCCTCTATTCATGTCA | + |
Preference number: 4 (lower is better) Translates to: RKSIPACRDEVGHAKKCWSPYVN*DPLFMS Trigger: TGACATGAATAGAGGATCTCAGTTCACATATGGAGA...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CTCTCAAATGGGATGTTTAACAGTTCTGTGTTCACAAATAGCATTGATGAAACACCCAAGAGGACCCATTaGTCCAGGTTTTCCAGGCAT | + |
Preference number: 4 (lower is better) Translates to: LSNGMFNSSVFTNSIDETPKRTH*SRFSRH Trigger: ATGCCTGGAAAACCTGGACCAATGGGTCCTCTTGGG...TGTTTCATCAATGCTATTTGTGAACACAGAACTGTTAAACATCCCATTTGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | GATCTTAGTTTTCACTCCTGGAAACTAAAAGGACCTAATATGTTCAAAGGATTCCAGTCCAGTTATCCCTaGCTCTCCTCTTTCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: DLSFHSWKLKGPNMFKGFQSSYP*LSSFSR Trigger: CCTGGAGAAAGAGGAGAGCCAGGGATAACTGGACTG...GAATCCTTTGAACATATTAGGTCCTTTTAGTTTCCAGGAGTGAAAACTAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCATCAAGGCCAAATTCCTaGTCTGCATTGCCAATATCC | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSSRPNS*SALPIS Trigger: GGATATTGGCAATGCAGACCAGGAATTTGGCCTTGA...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR CAA 72 bp | ATGAACTTTAAACAGTCACAGTTCTTGTGGTGGTCATaGATGGTAGTGCTCATTGTCGATATGTCTGGGCTT | + |
Preference number: 4 (lower is better) Translates to: MNFKQSQFLWWS*MVVLIVDMSGL Trigger: AAGCCCAGACATATCGACAATGAGCACTACCATCAATGACCACCACAAGAACTGTGACTGTTTAAAGTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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3UTR CAA 72 bp | ACTAGCCTGAGTTTTCTAACGCATAGACTGTCTTCATaGATGTCAACATGCCTTTGCAGGCAATGTTACAGA | + |
Preference number: 4 (lower is better) Translates to: TSLSFLTHRLSS*MSTCLCRQCYR Trigger: TCTGTAACATTGCCTGCAAAGGCATGTTGACATCAATGAAGACAGTCTATGCGTTAGAAAACTCAGGCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | GATCTTAGTTTTCACTCCTGGAAACTAAAAGGACCTAATATGTTCAAAGGATTCGACCAGCTTCTCCTTTaGAACCTGGAACTCCTGGAT | + |
Preference number: 4 (lower is better) Translates to: DLSFHSWKLKGPNMFKGFDQLLL*NLELLD Trigger: ATCCAGGAGTTCCAGGTTTCAAAGGAGAAGCTGGTC...GAATCCTTTGAACATATTAGGTCCTTTTAGTTTCCAGGAGTGAAAACTAAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | TTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTTACGTGGAACACTaGCTGGGTTTGCTGAAATAC | + |
Preference number: 4 (lower is better) Translates to: LIRCFAEIHDQSSMWALSFYVEH*LGLLKY Trigger: GTATTTCAGCAAACCCAGCCAGTGTTCCACGTAAAA...GGACAAGGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGATAAAACAGAAAGAATaGGGAGAGGTCTTGCTCCCA | + |
Preference number: 4 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWIKQKE*GEVLLP Trigger: TGGGAGCAAGACCTCTCCTCATTCTTTCTGTTTTAT...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGGGTAATCTCCATATGTaGACTGAGATCCTCTATTCA | + |
Preference number: 4 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLGNLHM*TEILYS Trigger: TGAATAGAGGATCTCAGTTCACATATGGAGATTACC...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR TCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTAGAGCAGGTGTCTTaGAGAACTGTGTATCTGAAT | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWALEQVS*RTVYLN Trigger: ATTCAGATACACAGTTCTTCAAGACACCTGCTCTAA...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | CTCTCAAATGGGATGTTTAACAGTTCTGTGTTCACAAATAGCATTGATGAAACACTCCAATTTCACCTTTaGGGCCTTCAAGACCTTTGT | + |
Preference number: 4 (lower is better) Translates to: LSNGMFNSSVFTNSIDETLQFHL*GLQDLC Trigger: ACAAAGGTCTTGAAGGCCCCAAAGGTGAAATTGGAG...TGTTTCATCAATGCTATTTGTGAACACAGAACTGTTAAACATCCCATTTGAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTCTTCAGCTGATCCCTaGTTAGGATCAATCCAATAT | + |
Preference number: 4 (lower is better) Translates to: MHLIRCFAEIHDQSSMWASSADP*LGSIQY Trigger: ATATTGGATTGATCCTAACCAGGGATCAGCTGAAGA...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CCA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCATTACATGAAACAAACTaGCCCAATATCAAGGCCAAA | + |
Preference number: 4 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSLHETN*PNIKAK Trigger: TTTGGCCTTGATATTGGGCCAGTTTGTTTCATGTAA...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | GGGGCCCTGCCAAGCCAGGAGGGCCAGAGGTTCCTGCAGAGCCTGTaGGGCCTTTGGCGCCAGGTGTACCATCAGTCCCCACTGCACCAG | + |
Preference number: 5 (lower is better) Translates to: GALPSQEGQRFLQSL*GLWRQVYHQSPLHQ Trigger: CTGGTGCAGTGGGGACTGATGGTACACCTGGCGCCAAAGGCCCCACAGGCTCTGCAGGAACCTCTGGCCCTCCTGGCTTGGCAGGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | CCAAGCCAGGAGGGCCAGAGGTTCCTGCAGAGCCTGTGGGGCCTTTaGCGCCAGGTGTACCATCAGTCCCCACTGCACCAGGAAGACCCT | + |
Preference number: 5 (lower is better) Translates to: PSQEGQRFLQSLWGL*RQVYHQSPLHQEDP Trigger: AGGGTCTTCCTGGTGCAGTGGGGACTGATGGTACACCTGGCGCCAAAGGCCCCACAGGCTCTGCAGGAACCTCTGGCCCTCCTGGCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | GGGGTCTCCACGGTCACCCCGTTCTCCAACAGCACCATCCCGTCCTaGGGTACCATCATTACCAGCCGGACCTTCTGGCCCAGGTTCTCC | + |
Preference number: 5 (lower is better) Translates to: GVSTVTPFSNSTIPS*GTIITSRTFWPRFS Trigger: GGAGAACCTGGGCCAGAAGGTCCGGCTGGTAATGATGGTACCCCAGGACGGGATGGTGCTGTTGGAGAACGGGGTGACCGTGGAGACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | GGAACACCATGTGGACCATGGGGGCCAGGTGATCCTGCTAGCCCTTaGGGTCCAGGAGACCCAGCATCTCCCTTCTGTCCTGGCTCTCCA | + |
Preference number: 5 (lower is better) Translates to: GTPCGPWGPGDPASP*GPGDPASPFCPGSP Trigger: TGGAGAGCCAGGACAGAAGGGAGATGCTGGGTCTCCTGGACCCCAAGGGCTAGCAGGATCACCTGGCCCCCATGGTCCACATGGTGTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | TGGCCCTGTGTCTCCAATGGTCCCAGTTGGACCTGGGTTGCCCTTTaGACCATCAGGGCCATGTCCTCCAGCCATGCCTTTCTCCCCAGG | + |
Preference number: 5 (lower is better) Translates to: WPCVSNGPSWTWVAL*TIRAMSSSHAFLPR Trigger: CCTGGGGAGAAAGGCATGGCTGGAGGACATGGCCCTGATGGTCCAAAGGGCAACCCAGGTCCAACTGGGACCATTGGAGACACAGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | CTCTCCTGGCATTCCTCTTGGTCCCAGAGGGCCCATAGCACCCATTaGACCAGTGGGGCCAGCTTCACCCTTAGCACCAGGTGCTCCAAT | + |
Preference number: 5 (lower is better) Translates to: LSWHSSWSQRAHSTH*TSGASFTLSTRCSN Trigger: ATTGGAGCACCTGGTGCTAAGGGTGAAGCTGGCCCCACTGGTCCAATGGGTGCTATGGGCCCTCTGGGACCAAGAGGAATGCCAGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | ATCTGGACCAGGTTGTCCATCTTCTCCTGGGTCCCCTTTATCTCCTaGGCTACCAGGTGGGCCAGCTGGTCCTCTATCTCCCACTCGCCC | + |
Preference number: 5 (lower is better) Translates to: IWTRLSIFSWVPFIS*ATRWASWSSISHSP Trigger: GGGCGAGTGGGAGATAGAGGACCAGCTGGCCCACCTGGTAGCCCAGGAGATAAAGGGGACCCAGGAGAAGATGGACAACCTGGTCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | AGCCGGACCTTCTGGCCCAGGTTCTCCTACAGGACCATTGGAACCTaGAGGTCCTACAGGTCCAGGGGGACCTTTATCTCCTGTCGCACC | + |
Preference number: 5 (lower is better) Translates to: SRTFWPRFSYRTIGT*RSYRSRGTFISCRT Trigger: GGTGCGACAGGAGATAAAGGTCCCCCTGGACCTGTAGGACCTCCAGGTTCCAATGGTCCTGTAGGAGAACCTGGGCCAGAAGGTCCGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | TGCTTCTCCTGGTTTTCCAAGGTCACCACTGCTACCTTTGGGGCCTaGAAGGCCCATGCTTCCAGGCTGTCCTCTGATCCCAATGGAGCC | + |
Preference number: 5 (lower is better) Translates to: CFSWFSKVTTATFGA*KAHASRLSSDPNGA Trigger: GGCTCCATTGGGATCAGAGGACAGCCTGGAAGCATGGGCCTTCCAGGCCCCAAAGGTAGCAGTGGTGACCTTGGAAAACCAGGAGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | ATGTCCTCCAGCCATGCCTTTCTCCCCAGGCAGTCCAGTTATCCCTaGCTCTCCTCTTTCTCCAGGATTCCCTCTTTCTCCCCGAGGTCC | + |
Preference number: 5 (lower is better) Translates to: MSSSHAFLPRQSSYP*LSSFSRIPSFSPRS Trigger: GGACCTCGGGGAGAAAGAGGGAATCCTGGAGAAAGAGGAGAGCCAGGGATAACTGGACTGCCTGGGGAGAAAGGCATGGCTGGAGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | AGGTGTTCCTGCAATTCCTCTTTCTCCTGGCATGCCCTGAAGACCTaGTGGCCCTGTGTCTCCAATGGTCCCAGTTGGACCTGGGTTGCC | + |
Preference number: 5 (lower is better) Translates to: RCSCNSSFSWHALKT*WPCVSNGPSWTWVA Trigger: GGCAACCCAGGTCCAACTGGGACCATTGGAGACACAGGGCCACCAGGTCTTCAGGGCATGCCAGGAGAAAGAGGAATTGCAGGAACACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 90 bp | GTCCTGGAGGACCAACTGTGCCTGGATCACCCCGAGGACCTCTTTTaGCTTCTTCACCAGGTGGACCAATGGGACCCTGAATACCATGTG | + |
Preference number: 5 (lower is better) Translates to: VLEDQLCLDHPEDLF*LLHQVDQWDPEYHV Trigger: CACATGGTATTCAGGGTCCCATTGGTCCACCTGGTGAAGAAGGCAAAAGAGGTCCTCGGGGTGATCCAGGCACAGTTGGTCCTCCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGCCACGAGAACCAGGATaGCCACGGGAGCCAGGAGGG | + |
Preference number: 5 (lower is better) Translates to: STHAEALHTPSCKLPARKPREPG*PREPGG Trigger: CCCTCCTGGCTCCCGTGGCAATCCTGGTTCTCGTGG...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGCGCCCCTTTCTCCCATaGGTCCTGGAGGACCAACTG | + |
Preference number: 5 (lower is better) Translates to: STHAEALHTPSCKLPARKRPFLP*VLEDQL Trigger: CAGTTGGTCCTCCAGGACCAATGGGAGAAAGGGGCG...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGACCTGGCTCTCCTCTTaGTCCTGCATCTCCAGGGGC | + |
Preference number: 5 (lower is better) Translates to: STHAEALHTPSCKLPARKTWLSS*SCISRG Trigger: GCCCCTGGAGATGCAGGACAAAGAGGAGAGCCAGGT...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 90 bp | CACCGCTCTGCTTTGTGGGATGGCAAAGCTTTAAATCATCACAAGTaGGGGCTGGGTGTTTCTTGGAACCATCAGGGCTACGCATGGTTT | + |
Preference number: 5 (lower is better) Translates to: HRSALWDGKALNHHK*GLGVSWNHQGYAWF Trigger: AAACCATGCGTAGCCCTGATGGTTCCAAGAAACACCCAGCCCGCACTTGTGATGATTTAAAGCTTTGCCATCCCACAAAGCAGAGCGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 90 bp | TATTCATGTCAAGACCGTACCACACAGGCTTATTGTCAGGGGATTTaGTGGCCCACCAGGTTTTACGTGGAACACTGGCTGGGTTTGCTG | + |
Preference number: 5 (lower is better) Translates to: YSCQDRTTQAYCQGI*WPTRFYVEHWLGLL Trigger: CAGCAAACCCAGCCAGTGTTCCACGTAAAACCTGGTGGGCCAGCAAATCCCCTGACAATAAGCCTGTGTGGTACGGTCTTGACATGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | GCACTCCCCAGTGGGTGTTATAGGATTGGCACAGTTGAGCACCTCTaGGCACTCTATCTTGTCACAAAGAATGGCACCATTGTCACAGAC | + |
Preference number: 5 (lower is better) Translates to: ALPSGCYRIGTVEHL*ALYLVTKNGTIVTD Trigger: GTCTGTGACAATGGTGCCATTCTTTGTGACAAGATAGAGTGCCCAGAGGTGCTCAACTGTGCCAATCCTATAACACCCACTGGGGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | TCATGTCAAGACCGTACCACACAGGCTTATTGTCAGGGGATTTGCTaGCCCACCAGGTTTTACGTGGAACACTGGCTGGGTTTGCTGAAA | + |
Preference number: 5 (lower is better) Translates to: SCQDRTTQAYCQGIC*PTRFYVEHWLGLLK Trigger: TTTCAGCAAACCCAGCCAGTGTTCCACGTAAAACCTGGTGGGCCAGCAAATCCCCTGACAATAAGCCTGTGTGGTACGGTCTTGACATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCAGGCCTCGGTCCCCTCTaGGTCCTTGTGATCCTGGGG | + |
Preference number: 5 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSGLGPL*VLVILG Trigger: CCCCAGGATCACAAGGACCAAGAGGGGACCGAGGCC...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCCTCCCTGAGCACCCTTaGGTCCAGGTAAACCATCAG | + |
Preference number: 5 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSLPEHP*VQVNHQ Trigger: CTGATGGTTTACCTGGACCAAAGGGTGCTCAGGGAG...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | CTTCAGGGTAACATGGATCCCAGGGTCTGTTTTGTTTGTGTCATCTaGAGCTGCCTGGTCTTCCGTAAACTCTGGAAGTGGATCTGGCAT | + |
Preference number: 5 (lower is better) Translates to: LQGNMDPRVCFVCVI*SCLVFRKLWKWIWH Trigger: ATGCCAGATCCACTTCCAGAGTTTACGGAAGACCAGGCAGCTCCAGATGACACAAACAAAACAGACCCTGGGATCCATGTTACCCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGCCCCGAGGACCTCTTTaGCCTTCTTCACCAGGTGGA | + |
Preference number: 5 (lower is better) Translates to: RKSIPACRDEVGHAKKCWPRGPL*PSSPGG Trigger: TCCACCTGGTGAAGAAGGCAAAAGAGGTCCTCGGGG...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTGACCTGGAAGACCCCTaGCCCCGTCATTTCCTGCTG | + |
Preference number: 5 (lower is better) Translates to: IHDQSSMWALSFGMAQIIDLEDP*PRHFLL Trigger: CAGCAGGAAATGACGGGGCAAGGGGTCTTCCAGGTC...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | TTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTGTCCCCAGTTGGACCTGGGTaGCCCTTTGGACCATCAGGG | + |
Preference number: 5 (lower is better) Translates to: LIRCFAEIHDQSSMWALSPVGPG*PFGPSG Trigger: CCCTGATGGTCCAAAGGGCAACCCAGGTCCAACTGG...GGACAAGGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ATACATGATCAAAGTTCTATGTGGGCCTTGTCCTTTGGGATGGCCCAGATTATTCTCCAATGGTCCCAGTaGGACCTGGGTTGCCCTTTG | + |
Preference number: 5 (lower is better) Translates to: IHDQSSMWALSFGMAQIILQWSQ*DLGCPL Trigger: CAAAGGGCAACCCAGGTCCAACTGGGACCATTGGAG...AATAATCTGGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | AGGAAATCTATCCCAGCTTGCAGAGATGAGGTAGGTCATGCTAAGAAATGTTGGACCATCTGGACCAGGTaGTCCATCTTCTCCTGGGTC | + |
Preference number: 5 (lower is better) Translates to: RKSIPACRDEVGHAKKCWTIWTR*SIFSWV Trigger: GACCCAGGAGAAGATGGACAACCTGGTCCAGATGGT...CCAACATTTCTTAGCATGACCTACCTCATCTCTGCAAGCTGGGATAGATTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | TCAACACATGCTGAGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGTCTCCATTGTCACCCTaGTCACCTCGAGGTCCTTGT | + |
Preference number: 5 (lower is better) Translates to: STHAEALHTPSCKLPARKSPLSP*SPRGPC Trigger: ACAAGGACCTCGAGGTGACAAGGGTGACAATGGAGA...CTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCTCAGCATGTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCACGGGCTGGGTGTTTCTaGGAACCATCAGGGCTACGC | + |
Preference number: 5 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSRAGCF*EPSGLR Trigger: GCGTAGCCCTGATGGTTCCAAGAAACACCCAGCCCG...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | GTTTGTGTCATCTGGAGCTGCCTGGTCTTCCGTAAACTCTGGAAGTaGATCTGGCATGTTCTCATCATAGTGTCCCATGATATCACCAAG | + |
Preference number: 5 (lower is better) Translates to: VCVIWSCLVFRKLWK*IWHVLIIVSHDITK Trigger: CTTGGTGATATCATGGGACACTATGATGAGAACATGCCAGATCCACTTCCAGAGTTTACGGAAGACCAGGCAGCTCCAGATGACACAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGAACCCTGAGGTCCTCTaGGGCCAACAGGACCCACAG | + |
Preference number: 5 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLNPEVL*GQQDPQ Trigger: CTGTGGGTCCTGTTGGCCCAAGAGGACCTCAGGGTT...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCACCTGGAAAACCACGATaGCCAGGAGCGCCCCTTTCT | + |
Preference number: 5 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSPGKPR*PGAPLS Trigger: AGAAAGGGGCGCTCCTGGCAATCGTGGTTTTCCAGG...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCGACCTGGGTTGCCCTTaGGACCATCAGGGCCATGTC | + |
Preference number: 5 (lower is better) Translates to: MHLIRCFAEIHDQSSMWADLGCP*DHQGHV Trigger: GACATGGCCCTGATGGTCCAAAGGGCAACCCAGGTC...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCGAACACTGGCTGGGTTaGCTGAAATACATGTCTCTC | + |
Preference number: 5 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSEHWLG*LKYMSL Trigger: GAGAGACATGTATTTCAGCAAACCCAGCCAGTGTTC...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCTTATTGTCAGGGGATTaGCTGGCCCACCAGGTTTTA | + |
Preference number: 5 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSLLSGD*LAHQVL Trigger: TAAAACCTGGTGGGCCAGCAAATCCCCTGACAATAA...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ACAATAAGAGGACACAGGGGGCATTACTCTCTACTTTTCAGACTGCAGCCAAGCAGGCATGAGTCCTACTaGACTTCCAAGTCCAGATTT | + |
Preference number: 5 (lower is better) Translates to: TIRGHRGHYSLLFRLQPSRHESY*TSKSRF Trigger: AAATCTGGACTTGGAAGTCAAGTAGGACTCATGCCT...GCTTGGCTGCAGTCTGAAAAGTAGAGAGTAATGCCCCCTGTGTCCTCTTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCATCCAACAATTCCTCTTaGCCCAGTGGTACCAGCGGG | + |
Preference number: 5 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSSNNSS*PSGTSG Trigger: CCCGCTGGTACCACTGGGCAAAGAGGAATTGTTGGA...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 90 bp | TGTTTTGTTTGTGTCATCTGGAGCTGCCTGGTCTTCCGTAAACTCTaGAAGTGGATCTGGCATGTTCTCATCATAGTGTCCCATGATATC | + |
Preference number: 5 (lower is better) Translates to: CFVCVIWSCLVFRKL*KWIWHVLIIVSHDI Trigger: GATATCATGGGACACTATGATGAGAACATGCCAGATCCACTTCCAGAGTTTACGGAAGACCAGGCAGCTCCAGATGACACAAACAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | GGTGGTCAGGCACTTCAGATCGTATGTACAAAGCTGATGCAGGACCAGCCATTAATACATCTGTCCATGTaGAGTACAGGCTATTTCTTC | + |
Preference number: 5 (lower is better) Translates to: GGQALQIVCTKLMQDQPLIHLSM*STGYFF Trigger: GAAGAAATAGCCTGTACTCAACATGGACAGATGTAT...TAATGGCTGGTCCTGCATCAGCTTTGTACATACGATCTGAAGTGCCTGACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | CGTCTACTAAATTGTGAACAAAAACTACCAGGAGATCTTAGTTTTCACTCCTGGTCTCCTACAGGACCATaGGAACCTGGAGGTCCTACA | + |
Preference number: 5 (lower is better) Translates to: RLLNCEQKLPGDLSFHSWSPTGP*EPGGPT Trigger: TGTAGGACCTCCAGGTTCCAATGGTCCTGTAGGAGA...CCAGGAGTGAAAACTAAGATCTCCTGGTAGTTTTTGTTCACAATTTAGTAGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTCACCTCTGTCTCCATaGTCACCCTTGTCACCTCGA | + |
Preference number: 5 (lower is better) Translates to: MHLIRCFAEIHDQSSMWASPLSP*SPLSPR Trigger: TCGAGGTGACAAGGGTGACAATGGAGACAGAGGTGA...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCGCTCCAATTTCACCTTaGGGGCCTTCAAGACCTTTG | + |
Preference number: 5 (lower is better) Translates to: MHLIRCFAEIHDQSSMWAAPISP*GPSRPL Trigger: CAAAGGTCTTGAAGGCCCCAAAGGTGAAATTGGAGC...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | CTCTCAAATGGGATGTTTAACAGTTCTGTGTTCACAAATAGCATTGATGAAACATCCCAAGAGGACCCATaGGTCCAGGTTTTCCAGGCA | + |
Preference number: 5 (lower is better) Translates to: LSNGMFNSSVFTNSIDETSQEDP*VQVFQA Trigger: TGCCTGGAAAACCTGGACCAATGGGTCCTCTTGGGA...TGTTTCATCAATGCTATTTGTGAACACAGAACTGTTAAACATCCCATTTGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | ATGCATTTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCAATGCCAGCACTTCCTaGTTCACCATTTGGACCAGG | + |
Preference number: 5 (lower is better) Translates to: MHLIRCFAEIHDQSSMWANASTS*FTIWTR Trigger: CCTGGTCCAAATGGTGAACAAGGAAGTGCTGGCATT...GGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAAATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | CTTTGGGATGGCCCAGATTATTTAAGTAAGAAACAACAATGGAGCAAACAACTGCAGGGTCTGTTTTGTTaGTGTCATCTGGAGCTGCCT | + |
Preference number: 5 (lower is better) Translates to: LWDGPDYLSKKQQWSKQLQGLFC*CHLELP Trigger: AGGCAGCTCCAGATGACACAAACAAAACAGACCCTG...CAGTTGTTTGCTCCATTGTTGTTTCTTACTTAAATAATCTGGGCCATCCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCAATCCCAGGGTCTGTTTaGTTTGTGTCATCTGGAGCT | + |
Preference number: 5 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSIPGSV*FVSSGA Trigger: AGCTCCAGATGACACAAACAAAACAGACCCTGGGAT...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | TTAATTCGATGCTTTGCAGAGATACATGATCAAAGTTCTATGTGGGCCTTGTCCATTCACCGCTCTGCTTaGTGGGATGGCAAAGCTTTA | + |
Preference number: 5 (lower is better) Translates to: LIRCFAEIHDQSSMWALSIHRSA*WDGKAL Trigger: TAAAGCTTTGCCATCCCACAAAGCAGAGCGGTGAAT...GGACAAGGCCCACATAGAACTTTGATCATGTATCTCTGCAAAGCATCGAATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | AGGCTTTACATACCCCATCATGTAAGCTACCTGCTAGGAAGAAGAATTTTCTCAGTTCCTGGGCTTTTATaGAGACACAGTACCCTAATA | + |
Preference number: 5 (lower is better) Translates to: RLYIPHHVSYLLGRRIFSVPGLL*RHSTLI Trigger: TATTAGGGTACTGTGTCTCAATAAAAGCCCAGGAAC...TGAGAAAATTCTTCTTCCTAGCAGGTAGCTTACATGATGGGGTATGTAAAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | CTCTCAAATGGGATGTTTAACAGTTCTGTGTTCACAAATAGCATTGATGAAACAAATTCCTGGTCTGCATaGCCAATATCCACAGGACCA | + |
Preference number: 5 (lower is better) Translates to: LSNGMFNSSVFTNSIDETNSWSA*PISTGP Trigger: TGGTCCTGTGGATATTGGCAATGCAGACCAGGAATT...TGTTTCATCAATGCTATTTGTGAACACAGAACTGTTAAACATCCCATTTGAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS TCA 90 bp | TCTATCTTGTCACAAAGAATGGCACCATTGTCACAGACACAGATCTaGCATGGAGAAGGTTTCCAAATGTCTCTATTTAAATACATCTGT | + |
Preference number: 5 (lower is better) Translates to: SILSQRMAPLSQTQI*HGEGFQMSLFKYIC Trigger: ACAGATGTATTTAAATAGAGACATTTGGAAACCTTCTCCATGTCAGATCTGTGTCTGTGACAATGGTGCCATTCTTTGTGACAAGATAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS-3UTR CAA 90 bp | CTCTCAAATGGGATGTTTAACAGTTCTGTGTTCACAAATAGCATTGATGAAACATCTGCGAGGCTTCTTTaGATAAAAGACGCAAAAAGG | + |
Preference number: 5 (lower is better) Translates to: LSNGMFNSSVFTNSIDETSARLL*IKDAKR Trigger: CCTTTTTGCGTCTTTTATCAAAAGAAGCCTCGCAGA...TGTTTCATCAATGCTATTTGTGAACACAGAACTGTTAAACATCCCATTTGAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 90 bp | GCCAAGCCAGGAGGGCCAGAGGTTCCTGCAGAGCCTGTGGGGCCTTaGGCGCCAGGTGTACCATCAGTCCCCACTGCACCAGGAAGACCC | + |
Preference number: 6 (lower is better) Translates to: AKPGGPEVPAEPVGP*APGVPSVPTAPGRP Trigger: GGGTCTTCCTGGTGCAGTGGGGACTGATGGTACACCTGGCGCCAAAGGCCCCACAGGCTCTGCAGGAACCTCTGGCCCTCCTGGCTTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | GAGGGCCAGAGGTTCCTGCAGAGCCTGTGGGGCCTTTaGCGCCAGGTGTACCATCAGTCCCCACTGCACCAG | + |
Preference number: 6 (lower is better) Translates to: EGQRFLQSLWGL*RQVYHQSPLHQ Trigger: CTGGTGCAGTGGGGACTGATGGTACACCTGGCGCCAAAGGCCCCACAGGCTCTGCAGGAACCTCTGGCCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 72 bp | GGAGGGCCAGAGGTTCCTGCAGAGCCTGTGGGGCCTTaGGCGCCAGGTGTACCATCAGTCCCCACTGCACCA | + |
Preference number: 6 (lower is better) Translates to: GGPEVPAEPVGP*APGVPSVPTAP Trigger: TGGTGCAGTGGGGACTGATGGTACACCTGGCGCCAAAGGCCCCACAGGCTCTGCAGGAACCTCTGGCCCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | AGTAGGGCCTGCAGGACCTGGAGGTCCCAAGGGACCTaGAAGACCCCTTGCCCCGTCATTTCCTGCTGTTCC | + |
Preference number: 6 (lower is better) Translates to: SRACRTWRSQGT*KTPCPVISCCS Trigger: GGAACAGCAGGAAATGACGGGGCAAGGGGTCTTCCAGGTCCCTTGGGACCTCCAGGTCCTGCAGGCCCTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | TGTGGACCATGGGGGCCAGGTGATCCTGCTAGCCCTTaGGGTCCAGGAGACCCAGCATCTCCCTTCTGTCCT | + |
Preference number: 6 (lower is better) Translates to: CGPWGPGDPASP*GPGDPASPFCP Trigger: AGGACAGAAGGGAGATGCTGGGTCTCCTGGACCCCAAGGGCTAGCAGGATCACCTGGCCCCCATGGTCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | CGCACCAGTTGGTCCTACTTTTCCTGGTGTACCCGCTaGGCCAGGAAGGCCAGGCATTCCTCGTTCCCCACG | + |
Preference number: 6 (lower is better) Translates to: RTSWSYFSWCTR*ARKARHSSFPT Trigger: CGTGGGGAACGAGGAATGCCTGGCCTTCCTGGCCCAGCGGGTACACCAGGAAAAGTAGGACCAACTGGTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | ACGGTCACCCCGTTCTCCAACAGCACCATCCCGTCCTaGGGTACCATCATTACCAGCCGGACCTTCTGGCCC | + |
Preference number: 6 (lower is better) Translates to: TVTPFSNSTIPS*GTIITSRTFWP Trigger: GGGCCAGAAGGTCCGGCTGGTAATGATGGTACCCCAGGACGGGATGGTGCTGTTGGAGAACGGGGTGACCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 90 bp | GTGGCCCTGTGTCTCCAATGGTCCCAGTTGGACCTGGGTTGCCCTTaGGACCATCAGGGCCATGTCCTCCAGCCATGCCTTTCTCCCCAG | + |
Preference number: 6 (lower is better) Translates to: VALCLQWSQLDLGCP*DHQGHVLQPCLSPQ Trigger: CTGGGGAGAAAGGCATGGCTGGAGGACATGGCCCTGATGGTCCAAAGGGCAACCCAGGTCCAACTGGGACCATTGGAGACACAGGGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS TCA 72 bp | GGTGTACCATCAGTCCCCACTGCACCAGGAAGACCCTaGGAGCCAGCTGGACCAGGTGGCCCAGTTTCACCT | + |
Preference number: 6 (lower is better) Translates to: GVPSVPTAPGRP*EPAGPGGPVSP Trigger: AGGTGAAACTGGGCCACCTGGTCCAGCTGGCTCTCAGGGTCTTCCTGGTGCAGTGGGGACTGATGGTACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | TGGTGGCCCTGTGTCTCCAATGGTCCCAGTTGGACCTaGGTTGCCCTTTGGACCATCAGGGCCATGTCCTCC | + |
Preference number: 6 (lower is better) Translates to: WWPCVSNGPSWT*VALWTIRAMSS Trigger: GGAGGACATGGCCCTGATGGTCCAAAGGGCAACCCAGGTCCAACTGGGACCATTGGAGACACAGGGCCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | CTACCGCCTTTCAGTCCAGGAACACCATGTGGACCATaGGGGCCAGGTGATCCTGCTAGCCCTTGGGGTCCA | + |
Preference number: 6 (lower is better) Translates to: LPPFSPGTPCGP*GPGDPASPWGP Trigger: TGGACCCCAAGGGCTAGCAGGATCACCTGGCCCCCATGGTCCACATGGTGTTCCTGGACTGAAAGGCGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 90 bp | TGTACCCGCTGGGCCAGGAAGGCCAGGCATTCCTCGTTCCCCACGTaGTCCGGGCATTCCAACAATTCCTCTTTGCCCAGTGGTACCAGC | + |
Preference number: 6 (lower is better) Translates to: CTRWARKARHSSFPT*SGHSNNSSLPSGTS Trigger: GCTGGTACCACTGGGCAAAGAGGAATTGTTGGAATGCCCGGACAACGTGGGGAACGAGGAATGCCTGGCCTTCCTGGCCCAGCGGGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | AAGACCTGGTGGCCCTGTGTCTCCAATGGTCCCAGTTaGACCTGGGTTGCCCTTTGGACCATCAGGGCCATG | + |
Preference number: 6 (lower is better) Translates to: KTWWPCVSNGPS*TWVALWTIRAM Trigger: CATGGCCCTGATGGTCCAAAGGGCAACCCAGGTCCAACTGGGACCATTGGAGACACAGGGCCACCAGGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 72 bp | TTTCATCCAGCCCAGCCATCTGAGCTGAAAAAGGCCTaGTCATGCCATCAGGTCCTGGGTGAGAGGGGTGCC | + |
Preference number: 6 (lower is better) Translates to: FHPAQPSELKKA*SCHQVLGERGA Trigger: GGCACCCCTCTCACCCAGGACCTGATGGCATGAGCAGGCCTTTTTCAGCTCAGATGGCTGGGCTGGATGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | TGGTTTTCCAAGGTCACCACTGCTACCTTTGGGGCCTaGAAGGCCCATGCTTCCAGGCTGTCCTCTGATCCC | + |
Preference number: 6 (lower is better) Translates to: WFSKVTTATFGA*KAHASRLSSDP Trigger: GGGATCAGAGGACAGCCTGGAAGCATGGGCCTTCCAGGCCCCAAAGGTAGCAGTGGTGACCTTGGAAAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | CTTCTCCTGGTTTTCCAAGGTCACCACTGCTACCTTTaGGGCCTGGAAGGCCCATGCTTCCAGGCTGTCCTC | + |
Preference number: 6 (lower is better) Translates to: LLLVFQGHHCYL*GLEGPCFQAVL Trigger: GAGGACAGCCTGGAAGCATGGGCCTTCCAGGCCCCAAAGGTAGCAGTGGTGACCTTGGAAAACCAGGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | GTCTCCAATGGTCCCAGTTGGACCTGGGTTGCCCTTTaGACCATCAGGGCCATGTCCTCCAGCCATGCCTTT | + |
Preference number: 6 (lower is better) Translates to: VSNGPSWTWVAL*TIRAMSSSHAF Trigger: AAAGGCATGGCTGGAGGACATGGCCCTGATGGTCCAAAGGGCAACCCAGGTCCAACTGGGACCATTGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | AGGTTGTCCATCTTCTCCTGGGTCCCCTTTATCTCCTaGGCTACCAGGTGGGCCAGCTGGTCCTCTATCTCC | + |
Preference number: 6 (lower is better) Translates to: RLSIFSWVPFIS*ATRWASWSSIS Trigger: GGAGATAGAGGACCAGCTGGCCCACCTGGTAGCCCAGGAGATAAAGGGGACCCAGGAGAAGATGGACAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 72 bp | TGGGCCAGGAAGGCCAGGCATTCCTCGTTCCCCACGTaGTCCGGGCATTCCAACAATTCCTCTTTGCCCAGT | + |
Preference number: 6 (lower is better) Translates to: WARKARHSSFPT*SGHSNNSSLPS Trigger: ACTGGGCAAAGAGGAATTGTTGGAATGCCCGGACAACGTGGGGAACGAGGAATGCCTGGCCTTCCTGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 72 bp | GACCAACTGTGCCTGGATCACCCCGAGGACCTCTTTTaGCTTCTTCACCAGGTGGACCAATGGGACCCTGAA | + |
Preference number: 6 (lower is better) Translates to: DQLCLDHPEDLF*LLHQVDQWDPE Trigger: TTCAGGGTCCCATTGGTCCACCTGGTGAAGAAGGCAAAAGAGGTCCTCGGGGTGATCCAGGCACAGTTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 72 bp | GTCCAGGTAAACCATCAGACCCTGGAAAACCACGATTaGCAGGAGCGCCCCTTTCTCCCATTGGTCCTGGAG | + |
Preference number: 6 (lower is better) Translates to: VQVNHQTLENHD*QERPFLPLVLE Trigger: CTCCAGGACCAATGGGAGAAAGGGGCGCTCCTGGCAATCGTGGTTTTCCAGGGTCTGATGGTTTACCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 72 bp | CAAGGGACCTGGAAGACCCCTTGCCCCGTCATTTCCTaGTGTTCCTTCAGCACCTTTCTCTCCTATGCCACC | + |
Preference number: 6 (lower is better) Translates to: QGTWKTPCPVIS*CSFSTFLSYAT Trigger: GGTGGCATAGGAGAGAAAGGTGCTGAAGGAACAGCAGGAAATGACGGGGCAAGGGGTCTTCCAGGTCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | TTCTGGCCCAGGTTCTCCTACAGGACCATTGGAACCTaGAGGTCCTACAGGTCCAGGGGGACCTTTATCTCC | + |
Preference number: 6 (lower is better) Translates to: FWPRFSYRTIGT*RSYRSRGTFIS Trigger: GGAGATAAAGGTCCCCCTGGACCTGTAGGACCTCCAGGTTCCAATGGTCCTGTAGGAGAACCTGGGCCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 72 bp | GTCCTGGAGGACCTCTTGGACCGAAAGGACCAGGAATaGCAGCACTTCCTTGTTCACCATTTGGACCAGGAG | + |
Preference number: 6 (lower is better) Translates to: VLEDLLDRKDQE*QHFLVHHLDQE Trigger: CTCCTGGTCCAAATGGTGAACAAGGAAGTGCTGGCATTCCTGGTCCTTTCGGTCCAAGAGGTCCTCCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | GACCGTACCACACAGGCTTATTGTCAGGGGATTTGCTaGCCCACCAGGTTTTACGTGGAACACTGGCTGGGT | + |
Preference number: 6 (lower is better) Translates to: DRTTQAYCQGIC*PTRFYVEHWLG Trigger: ACCCAGCCAGTGTTCCACGTAAAACCTGGTGGGCCAGCAAATCCCCTGACAATAAGCCTGTGTGGTACGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 90 bp | TCCTCTTGGGCCAACAGGACCCACAGAGCCAGGCATGAGTCCTACTaGACTTCCAAGTCCAGATTTTTCATCCAGCCCAGCCATCTGAGC | + |
Preference number: 6 (lower is better) Translates to: SSWANRTHRARHESY*TSKSRFFIQPSHLS Trigger: GCTCAGATGGCTGGGCTGGATGAAAAATCTGGACTTGGAAGTCAAGTAGGACTCATGCCTGGCTCTGTGGGTCCTGTTGGCCCAAGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS TCA 72 bp | CCAACAGGACCCACAGAGCCAGGCATGAGTCCTACTTaGCTTCCAAGTCCAGATTTTTCATCCAGCCCAGCC | + |
Preference number: 6 (lower is better) Translates to: PTGPTEPGMSPT*LPSPDFSSSPA Trigger: GGCTGGGCTGGATGAAAAATCTGGACTTGGAAGTCAAGTAGGACTCATGCCTGGCTCTGTGGGTCCTGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 72 bp | CAAGACCGTACCACACAGGCTTATTGTCAGGGGATTTaGTGGCCCACCAGGTTTTACGTGGAACACTGGCTG | + |
Preference number: 6 (lower is better) Translates to: QDRTTQAYCQGI*WPTRFYVEHWL Trigger: CAGCCAGTGTTCCACGTAAAACCTGGTGGGCCAGCAAATCCCCTGACAATAAGCCTGTGTGGTACGGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 72 bp | GCCAACAGGACCCACAGAGCCAGGCATGAGTCCTACTaGACTTCCAAGTCCAGATTTTTCATCCAGCCCAGC | + |
Preference number: 6 (lower is better) Translates to: ANRTHRARHESY*TSKSRFFIQPS Trigger: GCTGGGCTGGATGAAAAATCTGGACTTGGAAGTCAAGTAGGACTCATGCCTGGCTCTGTGGGTCCTGTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 90 bp | CACACCGGACAGCACTCCCCAGTGGGTGTTATAGGATTGGCACAGTaGAGCACCTCTGGGCACTCTATCTTGTCACAAAGAATGGCACCA | + |
Preference number: 6 (lower is better) Translates to: HTGQHSPVGVIGLAQ*STSGHSILSQRMAP Trigger: TGGTGCCATTCTTTGTGACAAGATAGAGTGCCCAGAGGTGCTCAACTGTGCCAATCCTATAACACCCACTGGGGAGTGCTGTCCGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 90 bp | GTTTGTGGGCACACCGGACAGCACTCCCCAGTGGGTGTTATAGGATaGGCACAGTTGAGCACCTCTGGGCACTCTATCTTGTCACAAAGA | + |
Preference number: 6 (lower is better) Translates to: VCGHTGQHSPVGVIG*AQLSTSGHSILSQR Trigger: TCTTTGTGACAAGATAGAGTGCCCAGAGGTGCTCAACTGTGCCAATCCTATAACACCCACTGGGGAGTGCTGTCCGGTGTGCCCACAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | TCCTCTACCAAAACTAGTATCTCCACCTCCAGTTTGTaGGCACACCGGACAGCACTCCCCAGTGGGTGTTAT | + |
Preference number: 6 (lower is better) Translates to: SSTKTSISTSSL*AHRTALPSGCY Trigger: ATAACACCCACTGGGGAGTGCTGTCCGGTGTGCCCACAAACTGGAGGTGGAGATACTAGTTTTGGTAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | AGTAGGACCTGCTTCTCCCTTCATTCCAGGATTTCCTaGAAAACCGGAAGAGCCAGGTATCCCAAGAGGACC | + |
Preference number: 6 (lower is better) Translates to: SRTCFSLHSRIS*KTGRARYPKRT Trigger: GGTCCTCTTGGGATACCTGGCTCTTCCGGTTTTCCAGGAAATCCTGGAATGAAGGGAGAAGCAGGTCCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 72 bp | TCAAGACCGTACCACACAGGCTTATTGTCAGGGGATTaGCTGGCCCACCAGGTTTTACGTGGAACACTGGCT | + |
Preference number: 6 (lower is better) Translates to: SRPYHTGLLSGD*LAHQVLRGTLA Trigger: AGCCAGTGTTCCACGTAAAACCTGGTGGGCCAGCAAATCCCCTGACAATAAGCCTGTGTGGTACGGTCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 90 bp | CTATTCATGTCAAGACCGTACCACACAGGCTTATTGTCAGGGGATTaGCTGGCCCACCAGGTTTTACGTGGAACACTGGCTGGGTTTGCT | + |
Preference number: 6 (lower is better) Translates to: LFMSRPYHTGLLSGD*LAHQVLRGTLAGFA Trigger: AGCAAACCCAGCCAGTGTTCCACGTAAAACCTGGTGGGCCAGCAAATCCCCTGACAATAAGCCTGTGTGGTACGGTCTTGACATGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS TCA 72 bp | CTTCCAAGTCCAGATTTTTCATCCAGCCCAGCCATCTaGGCTGAAAAAGGCCTGCTCATGCCATCAGGTCCT | + |
Preference number: 6 (lower is better) Translates to: LPSPDFSSSPAI*AEKGLLMPSGP Trigger: AGGACCTGATGGCATGAGCAGGCCTTTTTCAGCTCAGATGGCTGGGCTGGATGAAAAATCTGGACTTGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | CCAGGGTCTGTTTTGTTTGTGTCATCTGGAGCTGCCTaGTCTTCCGTAAACTCTGGAAGTGGATCTGGCATG | + |
Preference number: 6 (lower is better) Translates to: PGSVLFVSSGAA*SSVNSGSGSGM Trigger: CATGCCAGATCCACTTCCAGAGTTTACGGAAGACCAGGCAGCTCCAGATGACACAAACAAAACAGACCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 72 bp | CAGCACTCCCCAGTGGGTGTTATAGGATTGGCACAGTaGAGCACCTCTGGGCACTCTATCTTGTCACAAAGA | + |
Preference number: 6 (lower is better) Translates to: QHSPVGVIGLAQ*STSGHSILSQR Trigger: TCTTTGTGACAAGATAGAGTGCCCAGAGGTGCTCAACTGTGCCAATCCTATAACACCCACTGGGGAGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 72 bp | GCTTTGTGGGATGGCAAAGCTTTAAATCATCACAAGTaGGGGCTGGGTGTTTCTTGGAACCATCAGGGCTAC | + |
Preference number: 6 (lower is better) Translates to: ALWDGKALNHHK*GLGVSWNHQGY Trigger: GTAGCCCTGATGGTTCCAAGAAACACCCAGCCCGCACTTGTGATGATTTAAAGCTTTGCCATCCCACAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | AACATGGATCCCAGGGTCTGTTTTGTTTGTGTCATCTaGAGCTGCCTGGTCTTCCGTAAACTCTGGAAGTGG | + |
Preference number: 6 (lower is better) Translates to: NMDPRVCFVCVI*SCLVFRKLWKW Trigger: CCACTTCCAGAGTTTACGGAAGACCAGGCAGCTCCAGATGACACAAACAAAACAGACCCTGGGATCCATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 72 bp | GGATTGGCACAGTTGAGCACCTCTGGGCACTCTATCTaGTCACAAAGAATGGCACCATTGTCACAGACACAG | + |
Preference number: 6 (lower is better) Translates to: GLAQLSTSGHSI*SQRMAPLSQTQ Trigger: CTGTGTCTGTGACAATGGTGCCATTCTTTGTGACAAGATAGAGTGCCCAGAGGTGCTCAACTGTGCCAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 72 bp | AGAGACTTCAGGGTAACATGGATCCCAGGGTCTGTTTaGTTTGTGTCATCTGGAGCTGCCTGGTCTTCCGTA | + |
Preference number: 6 (lower is better) Translates to: RDFRVTWIPGSV*FVSSGAAWSSV Trigger: TACGGAAGACCAGGCAGCTCCAGATGACACAAACAAAACAGACCCTGGGATCCATGTTACCCTGAAGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 72 bp | CCTCTATTCATGTCAAGACCGTACCACACAGGCTTATaGTCAGGGGATTTGCTGGCCCACCAGGTTTTACGT | + |
Preference number: 6 (lower is better) Translates to: PLFMSRPYHTGL*SGDLLAHQVLR Trigger: ACGTAAAACCTGGTGGGCCAGCAAATCCCCTGACAATAAGCCTGTGTGGTACGGTCTTGACATGAATAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS TCA 72 bp | GGTCTGCATTGCCAATATCCACAGGACCAACATCTATaGTGGGCAAGCGGGCCACATTCTGTGTTCTGTATT | + |
Preference number: 6 (lower is better) Translates to: GLHCQYPQDQHL*WASGPHSVFCI Trigger: AATACAGAACACAGAATGTGGCCCGCTTGCCCATCATAGATGTTGGTCCTGTGGATATTGGCAATGCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | ATCTGGAGCTGCCTGGTCTTCCGTAAACTCTGGAAGTaGATCTGGCATGTTCTCATCATAGTGTCCCATGAT | + |
Preference number: 6 (lower is better) Translates to: IWSCLVFRKLWK*IWHVLIIVSHD Trigger: ATCATGGGACACTATGATGAGAACATGCCAGATCCACTTCCAGAGTTTACGGAAGACCAGGCAGCTCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | GCTTTAAATCATCACAAGTGCGGGCTGGGTGTTTCTTaGAACCATCAGGGCTACGCATGGTTTCAATCTGAC | + |
Preference number: 6 (lower is better) Translates to: ALNHHKCGLGVS*NHQGYAWFQSD Trigger: GTCAGATTGAAACCATGCGTAGCCCTGATGGTTCCAAGAAACACCCAGCCCGCACTTGTGATGATTTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | GGATCAATCCAATATTCACCGCTCTGCTTTGTGGGATaGCAAAGCTTTAAATCATCACAAGTGCGGGCTGGG | + |
Preference number: 6 (lower is better) Translates to: GSIQYSPLCFVG*QSFKSSQVRAG Trigger: CCCAGCCCGCACTTGTGATGATTTAAAGCTTTGCCATCCCACAAAGCAGAGCGGTGAATATTGGATTGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | AGTGGGTGTTATAGGATTGGCACAGTTGAGCACCTCTaGGCACTCTATCTTGTCACAAAGAATGGCACCATT | + |
Preference number: 6 (lower is better) Translates to: SGCYRIGTVEHL*ALYLVTKNGTI Trigger: AATGGTGCCATTCTTTGTGACAAGATAGAGTGCCCAGAGGTGCTCAACTGTGCCAATCCTATAACACCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS GCA 72 bp | ACAAACTGGCCCAATATCAAGGCCAAATTCCTGGTCTaGATTGCCAATATCCACAGGACCAACATCTATGAT | + |
Preference number: 6 (lower is better) Translates to: TNWPNIKAKFLV*IANIHRTNIYD Trigger: ATCATAGATGTTGGTCCTGTGGATATTGGCAATGCAGACCAGGAATTTGGCCTTGATATTGGGCCAGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CCA 72 bp | ATGAAACAAACTGGCCCAATATCAAGGCCAAATTCCTaGTCTGCATTGCCAATATCCACAGGACCAACATCT | + |
Preference number: 6 (lower is better) Translates to: MKQTGPISRPNS*SALPISTGPTS Trigger: AGATGTTGGTCCTGTGGATATTGGCAATGCAGACCAGGAATTTGGCCTTGATATTGGGCCAGTTTGTTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS TCA 72 bp | TTGCCTACATTTCCATTTCGCTTAGAGCAGGTGTCTTaGAGAACTGTGTATCTGAATCTGATGTTTCCTTCT | + |
Preference number: 6 (lower is better) Translates to: LPTFPFRLEQVS*RTVYLNLMFPS Trigger: AGAAGGAAACATCAGATTCAGATACACAGTTCTTCAAGACACCTGCTCTAAGCGAAATGGAAATGTAGGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 72 bp | TTTGCCTACATTTCCATTTCGCTTAGAGCAGGTGTCTaGAAGAACTGTGTATCTGAATCTGATGTTTCCTTC | + |
Preference number: 6 (lower is better) Translates to: FAYISISLRAGV*KNCVSESDVSF Trigger: GAAGGAAACATCAGATTCAGATACACAGTTCTTCAAGACACCTGCTCTAAGCGAAATGGAAATGTAGGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS TCA 72 bp | TCACAAAGAATGGCACCATTGTCACAGACACAGATCTaGCATGGAGAAGGTTTCCAAATGTCTCTATTTAAA | + |
Preference number: 6 (lower is better) Translates to: SQRMAPLSQTQI*HGEGFQMSLFK Trigger: TTTAAATAGAGACATTTGGAAACCTTCTCCATGTCAGATCTGTGTCTGTGACAATGGTGCCATTCTTTGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |
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CDS CAA 90 bp | AAAGATAGTTTTGCCTACATTTCCATTTCGCTTAGAGCAGGTGTCTaGAAGAACTGTGTATCTGAATCTGATGTTTCCTTCTCCTTTTAT | + |
Preference number: 6 (lower is better) Translates to: KDSFAYISISLRAGV*KNCVSESDVSFSFY Trigger: ATAAAAGGAGAAGGAAACATCAGATTCAGATACACAGTTCTTCAAGACACCTGCTCTAAGCGAAATGGAAATGTAGGCAAAACTATCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086430.5 |