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Pregenerated sensors for COL4A6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031273

Ensembl transcript IDs: ENSMUST00000101205.3

Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGTaGGCTCATCTGTTGGGTCTGAGGGTTGGGATGACCATTGTCCAG +
Preference number: 1 (lower is better)
Translates to: VSTRWMETGKQILAQ*AHLLGLRVGMTIVQ
Trigger: CTGGACAATGGTCATCCCAACCCTCAGACCCAACAGATGAGCCCACTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR CCA 90 bp AAAGCAAATCCTAGCACAGTGGGCTCATCTGTTGGGTCTGAGGGTTaGGATGACCATTGTCCAGTAGTCCAGTCCAAACGAGGCATTGAT +
Preference number: 1 (lower is better)
Translates to: KANPSTVGSSVGSEG*DDHCPVVQSKRGID
Trigger: ATCAATGCCTCGTTTGGACTGGACTACTGGACAATGGTCATCCCAACCCTCAGACCCAACAGATGAGCCCACTGTGCTAGGATTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR CCA 90 bp CTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACTaGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGGGCTTAACA +
Preference number: 1 (lower is better)
Translates to: LDVGPGDSDLSRTKY*PFSLSYSRWGMGLT
Trigger: TGTTAAGCCCATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR GCA 90 bp TGTTTGGATGGCCATTTTATCAGAACACCTCTAAGAGCCTCAGCATaGAAGGAGCCAACACACTGCAGCTTCAGTTTGTCACCCTGCATA +
Preference number: 1 (lower is better)
Translates to: CLDGHFIRTPLRASA*KEPTHCSFSLSPCI
Trigger: TATGCAGGGTGACAAACTGAAGCTGCAGTGTGTTGGCTCCTTGCATGCTGAGGCTCTTAGAGGTGTTCTGATAAAATGGCCATCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR TCA 90 bp AAGGAAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTaGTTGTGTTCTCCGCAACTGGTAATTAAAATGAACTGCTTCAAA +
Preference number: 1 (lower is better)
Translates to: KEANHLQGSASCQWN*LCSPQLVIKMNCFK
Trigger: TTTGAAGCAGTTCATTTTAATTACCAGTTGCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR-3UTR TCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCCTTTCTCAGACTGTTaGGGTGAGTGTTGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: KPITCKGALHVSGTDCVLPFSDC*GECCEV
Trigger: CACCTCACAACACTCACCTCAACAGTCTGAGAAAGG...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR-3UTR GCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTATGTATTTCTCCTTCTaGCCTAGGCCAAGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: QTEGSILHGQLRMYLGSAMYFSF*PRPRRR
Trigger: CCTTCTTCTTGGCCTAGGGCAGAAGGAGAAATACAT...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR-3UTR CCA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTAACTTGACAGGCAGATaGGCTCAGGCCTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTNLTGR*AQAFLS
Trigger: AGAAAGGAAGGCCTGAGCCCATCTGCCTGTCAAGTT...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR-3UTR CCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCACACACATATCTAAATaGAATGTTAGCACCAGATGG +
Preference number: 2 (lower is better)
Translates to: PITCKGALHVSGTDCVLRTHISK*NVSTRW
Trigger: CCATCTGGTGCTAACATTCCATTTAGATATGTGTGT...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR-3UTR CCA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGGTTCTGGCTATAGGCTaGTTTCTCATTCCAACACTA +
Preference number: 2 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMVLAIG*FLIPTL
Trigger: TAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAAC...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR-3UTR CAA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCCATGAGCTTTACCTTTaGGTTCCTGGACTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: PITCKGALHVSGTDCVLRHELYL*VPGLRS
Trigger: GCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATG...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR CCA 72 bp AGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGTaGGCTCATCTGTTGGGTCTGAGGGTTGGGATGACC +
Preference number: 3 (lower is better)
Translates to: RWMETGKQILAQ*AHLLGLRVGMT
Trigger: GGTCATCCCAACCCTCAGACCCAACAGATGAGCCCACTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR CCA 72 bp GGACCAGGGGACAGTGATTTGTCTAGGACCAAATACTaGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATG +
Preference number: 3 (lower is better)
Translates to: GPGDSDLSRTKY*PFSLSYSRWGM
Trigger: CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR-3UTR CAA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTCAGTGGGCTCATCTGTaGGGTCTGAGGGTTGGGATG +
Preference number: 3 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTQWAHL*GLRVGM
Trigger: CATCCCAACCCTCAGACCCAACAGATGAGCCCACTG...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR GCA 72 bp GGCCATTTTATCAGAACACCTCTAAGAGCCTCAGCATaGAAGGAGCCAACACACTGCAGCTTCAGTTTGTCA +
Preference number: 3 (lower is better)
Translates to: GHFIRTPLRASA*KEPTHCSFSLS
Trigger: TGACAAACTGAAGCTGCAGTGTGTTGGCTCCTTGCATGCTGAGGCTCTTAGAGGTGTTCTGATAAAATGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR CCA 72 bp ACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATaGGGCATGGGCTTAACAAAACTCTGCAAGGAATCA +
Preference number: 3 (lower is better)
Translates to: TKYWPFSLSYSR*GMGLTKLCKES
Trigger: TGATTCCTTGCAGAGTTTTGTTAAGCCCATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR TCA 72 bp AATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTaGTTGTGTTCTCCGCAACTGGTAATTAAAATGAAC +
Preference number: 3 (lower is better)
Translates to: NHLQGSASCQWN*LCSPQLVIKMN
Trigger: GTTCATTTTAATTACCAGTTGCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR GCA 72 bp GCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTaGTACCTCTATATGTATTTCTCCTTCTGCCCTAGG +
Preference number: 3 (lower is better)
Translates to: ALPFGSWTQKQN*YLYMYFSFCPR
Trigger: CCTAGGGCAGAAGGAGAAATACATATAGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR GCA 72 bp GTGATAACAAGAGCTCAGAATGTACTTGTTATGCTTTaGCTGCGTGGGCACGGTTTACATAGTACTCAAGGA +
Preference number: 3 (lower is better)
Translates to: VITRAQNVLVML*LRGHGLHSTQG
Trigger: TCCTTGAGTACTATGTAAACCGTGCCCACGCAGGCAAAGCATAACAAGTACATTCTGAGCTCTTGTTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR-3UTR CAA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACATCCTGAGCTTTAGTTaGACTCAAATGATGTGTGGT +
Preference number: 3 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYILSFS*TQMMCG
Trigger: ACCACACATCATTTGAGTCAAACTAAAGCTCAGGAT...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR GCA 72 bp AAGCAAAACTGCTACCTCTATATGTATTTCTCCTTCTaGCCTAGGCCAAGAAGAAGGAGAAGTGATTCTCAT +
Preference number: 3 (lower is better)
Translates to: KQNCYLYMYFSF*PRPRRRRSDSH
Trigger: ATGAGAATCACTTCTCCTTCTTCTTGGCCTAGGGCAGAAGGAGAAATACATATAGAGGTAGCAGTTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR CCA 72 bp ATCACACACATATCTAAATGGAATGTTAGCACCAGATaGATGGAAACAGGAAAGCAAATCCTAGCACAGTGG +
Preference number: 3 (lower is better)
Translates to: ITHISKWNVSTR*METGKQILAQW
Trigger: CCACTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTTAGATATGTGTGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGGGGAGACTAGGGACTaGCCTCCACCCTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRGETRD*PPPSAP
Trigger: TGGGGCTGAGGGTGGAGGCCAGTCCCTAGTCTCCCC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCAGGCCAGGAAATCCCTaGGGCCCTAGGGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRRPGNP*GPRAPG
Trigger: TCCAGGTGCCCTAGGGCCTCAGGGATTTCCTGGCCT...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCAGATGGAGGTGGTCCTaGAGGGCCAGGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRRWRWS*RAREAN
Trigger: GTTGGCCTCCCTGGCCCTGCAGGACCACCTCCATCT...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGGACCGGCTGGACCTTaGGTTCCAATTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRGPAGP*VPIGPG
Trigger: CCCTGGACCAATTGGAACTCAAGGTCCAGCCGGTCC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGACTGTCCTGCTATGACTaGGGGCAAGGAGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGLSCYD*GQGDAW
Trigger: CCAGGCATCTCCTTGCCCTCAGTCATAGCAGGACAG...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCCGTGAGTGCCAGGCTTaGCTGGAATTCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRRECQA*LEFQGG
Trigger: GCCTCCCTGGAATTCCAGGCAAGCCTGGCACTCACG...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGCCGGCTCATCCCAGTaGGGCATAGTGGCACCTGTT +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRAGSSQ*GIVAPV
Trigger: AACAGGTGCCACTATGCCCCACTGGGATGAGCCGGC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGACGCCATCTGCATCAGTaGAACTGTCTGGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGRHLHQ*NCLGLE
Trigger: TTCGAGGCCCAGACAGTTTCACTGATGCAGATGGCG...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCAGGATCGCCTTGATCTaGGGATGGCCCAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLRIALI*GWPRGT
Trigger: GGTCCCCCTGGGCCATCCTCAGATCAAGGCGATCCT...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCTGCCAGGAGTCCCCATaGGGCCAGGTTCCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLCQESP*GQVPLS
Trigger: TGAGAGGGGAACCTGGCCTCATGGGGACTCCTGGCA...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGACTGGTAACCCTGGGATaGCAGGCTCTCCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGLVTLG*QALLCH
Trigger: GTGACAAAGGAGAGCCTGGCATCCCAGGGTTACCAG...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGAACCTGGGATACCAGTTaGTCCCAGGAGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGTWDTS*SQEARS
Trigger: ACTTCTGGCCTCCTGGGAGCAACTGGTATCCCAGGT...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTGCCATCTGGGCCAGGTaGACCTCTTGGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSAAIWAR*TSWTWL
Trigger: CAGCCAGGTCCAAGAGGTCCACCTGGCCCAGATGGC...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGGGCCACGTTGGCCTTaGACGCCTTCATCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRGPRWP*TPSSPL
Trigger: TAGAGGAGATGAAGGCGTCCAAGGCCAACGTGGCCC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGGCCCGGAATACCACTaGTGCCAACAAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRGPEYH*CQQSQE
Trigger: TTCCTGGCTTTGTTGGCATCAGTGGTATTCCGGGCC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGACCTTTGAGGCCAGTCTaGCCTCTAGGTCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGPLRPV*PLGPNS
Trigger: GCTATTTGGACCTAGAGGTCAGACTGGCCTCAAAGG...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCCGCTGCACTCAATaGAAGGAGTGGCCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLRRCTQ*KEWPGS
Trigger: ACTTCCGGGCCACTCCTTTCATTGAGTGCAGCGGCG...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTCTTGCCCGGAGTTCCTaGCAAACCTGGGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSALARSS*QTWGTL
Trigger: CAGGGTACCCCAGGTTTGGCAGGAACTCCGGGCAAG...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGACTTTGCTTCCGTGAGTaGCAGGCTTGCCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGLCFRE*QACLEF
Trigger: GAATTCCAGGCAAGCCTGGCACTCACGGAAGCAAAG...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGATCCCATTCAAACCCTTaGGTCCTGGAAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGSHSNP*VLEGQS
Trigger: ACTCTGGCCTTCCAGGACCCAAGGGTTTGAATGGGA...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCAGTGATACTGGCTCCTaGAGTGCCATGGGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRSDTGS*SAMGAL
Trigger: AAGGGCACCCATGGCACTCCAGGAGCCAGTATCACT...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTGGGCAAGGAGATGCCTaGGGCTCCAGGGGTACCAGC +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSGQGDA*GSRGTS
Trigger: GCTGGTACCCCTGGAGCCCCAGGCATCTCCTTGCCC...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTTCCTGGAGCTCCCTGTaGGCCGGAAAAGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSASWSSL*AGKASW
Trigger: CCAAGAGGCTTTTCCGGCCCACAGGGAGCTCCAGGA...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGTTTTCATACACACCTaGCAGCGGCTCACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRVFIHT*QRLTLV
Trigger: CACCAGGGTGAGCCGCTGCCAGGTGTGTATGAAAAC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGGCCAACATCCCCCTTaGCTCCTTTTTCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRGQHPP*LLFLLG
Trigger: TCCAAGGAGAAAAAGGAGTCAAGGGGGATGTTGGCC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGAAATCCCAGGAAAACCTaGAGTCCCCTTCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGNPRKT*SPLLSL
Trigger: CAGGGAAAGAAGGGGACTTCAGGTTTTCCTGGGATT...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCAAACCTGGGGTACCCTaGGGACCAGGGTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLKPGVP*GPGSPL
Trigger: CAAAGGTGACCCTGGTCCTCAGGGTACCCCAGGTTT...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTGACCCACCATCTCCCTaGATGCCTGGGAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSDPPSP*MPGRPG
Trigger: ACCAGGCCTCCCAGGCATTCAGGGAGATGGTGGGTC...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGGCACTGTGGGACAATaGTGTCCTGACTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRGTVGQ*CPDCVQ
Trigger: CTGTACACAGTCAGGACATCATTGTCCCACAGTGCC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCTGGTCCCAGAGGGCCTaGGGAGCCTCTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLWSQRA*GASFSF
Trigger: AAAGGAGAAAGAGGCTCCCCAGGCCCTCTGGGACCA...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCTGGACCTCTTGGACCTaGCTGTCCAGGGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIWTSWT*LSRVAR
Trigger: CCGGGCCACCCTGGACAGCCAGGTCCAAGAGGTCCA...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGTAGCCATCAGGGCCTaGAAATCCAACAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRVAIRA*KSNSSL
Trigger: CAAGGAGCTGTTGGATTTCCAGGCCCTGATGGCTAC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCATTCCTGGGAAACCTaGAGGCCCTGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLHSWET*RPWLTL
Trigger: AAGGGTGAGCCAGGGCCTCCAGGTTTCCCAGGAATG...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTAGTGCCAGGCTTGCCTaGAATTCCAGGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSSARLA*NSREAP
Trigger: CGGGGCCTCCCTGGAATTCCAGGCAAGCCTGGCACT...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCATGGCCAGAGGAACCTaGGAGGCCTGGGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLMARGT*EAWVSI
Trigger: AATGGAGACCCAGGCCTCCCAGGTTCCTCTGGCCAT...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGGATTCCAGATGGGCCTaGAAGCCCACTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMDSRWA*KPTGAI
Trigger: GATGGCCCCAGTGGGCTTCCAGGCCCATCTGGAATC...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCCCTGTAATGCTGCCTTaGAAAGGAACAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRPVMLP*KGTGSP
Trigger: AGGAGAGCCTGTTCCTTTTCAAGGCAGCATTACAGG...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTCAGGGTGCCCTGAGATaGCTGGAAGGCCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTQGALR*LEGLVL
Trigger: GAGCACCAGGCCTTCCAGGCATCTCAGGGCACCCTG...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTCTGGAGTGCCATGGGTaGCCTTGGTGCCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSLECHG*PWCLEV
Trigger: GACTTCCAGGCACCAAGGGCACCCATGGCACTCCAG...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTTACTGGCTCCTGGAGTaGCATGGGTGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSYWLLE*HGCPWC
Trigger: GCACCAAGGGCACCCATGGCACTCCAGGAGCCAGTA...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTAGGGCCACTCATTCCTaGGAAACCTGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSRATHS*ETWRPW
Trigger: CCAGGGCCTCCAGGTTTCCCAGGAATGAGTGGCCCT...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTAAGGCCTGGTGCTCCTaGGAATCCAGATGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSAKAWCS*ESRCAL
Trigger: AAGGGCACATCTGGATTCCCAGGAGCACCAGGCCTT...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCGCTCCTGGAGTGCCATaGGTGCCCTTGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIAPGVP*VPLVPG
Trigger: TCCAGGCACCAAGGGCACCCATGGCACTCCAGGAGC...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCGCCCAGAGGGCACTGTaGGACAATGATGTCCTGACT +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLAQRAL*DNDVLT
Trigger: AGTCAGGACATCATTGTCCCACAGTGCCCTCTGGGC...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp TTCGCTGTTATAAAGAACTTCCAGCTTAAGGCAGTGAAGAGAGCTCTAGCCATCGGCAAGGTGACTCCTTaGGCTCCACGGAGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: FAVIKNFQLKAVKRALAIGKVTP*APRRPC
Trigger: ACAAGGCCTCCGTGGAGCTCAAGGAGTCACCTTGCC...GATGGCTAGAGCTCTCTTCACTGCCTTAAGCTGGAAGTTCTTTATAACAGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp ATGTATTTCTCCTTCTGCCCTAGGCCAAGAAGAAGGAGAAGTGATTCTCATGTCCCCAGTGAGCCCCTGTaGACCGCTTTTCCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: MYFSFCPRPRRRRSDSHVPSEPL*TAFPWH
Trigger: ATGCCAGGGAAAAGCGGTTCACAGGGGCTCACTGGG...GACATGAGAATCACTTCTCCTTCTTCTTGGCCTAGGGCAGAAGGAGAAATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGCAGCAGCAGTGTGCATaGGGAAGGAGTATCCGATCC +
Preference number: 4 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMQQQCA*GRSIRS
Trigger: GGATCGGATACTCCTTCCTCATGCACACTGCTGCTG...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTCCAATTGGTCCAGGGTaGCCTCTTGCTCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSAPIGPG*PLAPFS
Trigger: TGAGAAAGGAGCAAGAGGGCACCCTGGACCAATTGG...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTCTGGTAACCCTGGACTaGCAGCTTTCCCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSLVTLD*QLSQGS
Trigger: GCTACCCTGGGAAAGCTGGCAGTCCAGGGTTACCAG...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACCCTGGGTCTCCTGGTTaGCCGATCTTGCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYPGSPG*PILPGV
Trigger: GACTCCTGGCAAGATCGGGCAACCAGGAGACCCAGG...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTCCAGAAGGGCCACGTTaGCCTTGGACGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSPEGPR*PWTPSS
Trigger: AGATGAAGGCGTCCAAGGCCAACGTGGCCCTTCTGG...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTGGACCTTGTTCTCCTTaGAGACCAGGGAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSGPCSP*RPGNPG
Trigger: GCCTGGGTTCCCTGGTCTCCAAGGAGAACAAGGTCC...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGACCAATTGGACCATCATaGCCTTTTTCACCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGPIGPS*PFSPGS
Trigger: ACTTCCTGGTGAAAAAGGCCATGATGGTCCAATTGG...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACTGCCCCGCTCACCCTTaGGGCCTAGCATACCAGGTT +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYCPAHP*GLAYQV
Trigger: AACCTGGTATGCTAGGCCCCAAGGGTGAGCGGGGCA...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTGATGCCTGGAAGGCCTaGTGCTCCTGGGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSDAWKA*CSWESR
Trigger: TCTGGATTCCCAGGAGCACCAGGCCTTCCAGGCATC...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCATATACTGGGGAATCTaGGTCTGGCCCACAGGCATC +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLIYWGI*VWPTGI
Trigger: GATGCCTGTGGGCCAGACCCAGATTCCCCAGTATAT...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCTACAGCAATGGCTTGTaGGGGTGCCTCACATACAGA +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLYSNGL*GCLTYR
Trigger: TCTGTATGTGAGGCACCCTCACAAGCCATTGCTGTA...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGCGGCTCACCCTGGTGTaGAGCTGCCCAGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KWNVSTRWMETGKQILAQRLTLV*SCPVFS
Trigger: GCTGAAAACTGGGCAGCTTCACACCAGGGTGAGCCG...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTTGGTCCTATGGGTCCTaGATCTCCAGGAGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTWSYGS*ISRRAG
Trigger: TCCGGCTCTCCTGGAGATGCAGGACCCATAGGACCA...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTGTCCAGTCTCAAATGTaGGACCAGGTGGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSVQSQM*DQVGLM
Trigger: CATCAGGCCCACCTGGTCGCACATTTGAGACTGGAC...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCGCCTGGAAGGCCTGGTaGTCCTGGGAATCCAGATGT +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIAWKAW*SWESRC
Trigger: ACATCTGGATTCCCAGGAGCACCAGGCCTTCCAGGC...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATACCCACTCTCACACCGTaGCCAGGCATCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGYRLVSHSNTTACLNIIPTLTP*PGIPGC
Trigger: GCAGCCTGGGATGCCTGGGCACGGTGTGAGAGTGGG...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTCATGTACAGACTCCATaGCAATCTCGGCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSAHVQTP*QSRLPH
Trigger: ATGTGGGAGCCGAGATTGCCATGGAGTCTGTACATG...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCACCTGGTTCCCCATGTaGTCCAATGTTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHITWFPM*SNVGGT
Trigger: GGTGCCCCCAACATTGGACCACATGGGGAACCAGGT...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTAACCCTGTAGACCAATaGGACCTTGTATCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSANPVDQ*DLVSQA
Trigger: TGCCTGGGATACAAGGTCCCATTGGTCTACAGGGTT...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCAGTTCCTGCCAAACCTaGGGTACCCTGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHISSCQT*GTLRTR
Trigger: CCTGGTCCTCAGGGTACCCCAGGTTTGGCAGGAACT...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp ATGTATTTCTCCTTCTGCCCTAGGCCAAGAAGAAGGAGAAGTGATTCTCATGTCAGCTCCCTTAGAGCCTaGGAATCCAGGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: MYFSFCPRPRRRRSDSHVSSLRA*ESRSSR
Trigger: CCTGGAGCTCCTGGATTCCCAGGCTCTAAGGGAGCT...GACATGAGAATCACTTCTCCTTCTTCTTGGCCTAGGGCAGAAGGAGAAATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTAATCCCTTGAAGTCCTaGGGAGCCAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTNPLKS*GAREAR
Trigger: CCTGGCTTCCCTGGCTCCCCAGGACTTCAAGGGATT...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATACTCCCCTTTCCCCTTTaGGACCAGGCAGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SGYRLVSHSNTTACLNIILPFPL*DQAGQP
Trigger: CGGCTGGCCTGCCTGGTCCCAAAGGGGAAAGGGGAG...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATAAGGACCTGGAGGGCCTaGGCGGCCTCGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: SGYRLVSHSNTTACLNIIRTWRA*AASFSI
Trigger: GATGGAGAACGAGGCCGCCCAGGCCCTCCAGGTCCT...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTGAACCCTTGAAGGCCTaGAATCCCAGGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSEPLKA*NPREAR
Trigger: TCTGGCTTCCCTGGGATTCCAGGCCTTCAAGGGTTC...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTCATAGCTTCAGCAATTaGTGTGTGTCCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSAHSFSN*CVSWSS
Trigger: GGAGCTCCAGGACACACACCAATTGCTGAAGCTATG...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTCAGCGGCTGATATACTaGGGAATCTGGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTQRLIY*GIWVWP
Trigger: GGGCCAGACCCAGATTCCCCAGTATATCAGCCGCTG...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGAGAGCCGGAGGATCCTaGTGGACCAGGGATTCCATC +
Preference number: 4 (lower is better)
Translates to: KWNVSTRWMETGKQILAQRAGGS*WTRDSI
Trigger: GATGGAATCCCTGGTCCATCAGGATCCTCCGGCTCT...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTTGTATTCCTTCTaGACCCATGGGACCCCTAGG +
Preference number: 4 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTALYSF*THGTPR
Trigger: CCTAGGGGTCCCATGGGTTCAGAAGGAATACAAGGC...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCGTCTCCAGGATAACCTaGGATCACAGCGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIVSRIT*DHSAIC
Trigger: GCAGATGGCGCTGTGATCTCAGGTTATCCTGGAGAC...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATACTTTCCAGGGTGCCCTaGGATGCCTGGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGYRLVSHSNTTACLNIILSRVP*DAWKAW
Trigger: CCAGGCCTTCCAGGCATCTCAGGGCACCCTGGAAAG...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGCCTATGTCTCCTCTTTaGCCTTTCTTTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMPMSPL*PFFPGC
Trigger: GCACCCTGGAAAGAAAGGTCAAAGAGGAGACATAGG...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACAAGCCAGGTGACCCTTaGGGACCAGGAAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYKPGDP*GPGRPF
Trigger: AAAAGGCCTTCCTGGTCCTCAAGGGTCACCTGGCTT...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATACCCCAGGAAGCCAGGTaGCCCTTGAGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGYRLVSHSNTTACLNIIPQEAR*PLRTRK
Trigger: CTTCCTGGTCCTCAAGGGTCACCTGGCTTCCTGGGG...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACTTTCCCTTGAACCCTTaGAGGCCTGGAATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYFPLNP*RPGIPG
Trigger: CCCTGGGATTCCAGGCCTTCAAGGGTTCAAGGGAAA...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTATACAGAGCAGCGGCTaGTATACTGGGGAATCTGGG +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSIQSSG*YTGESG
Trigger: CCCAGATTCCCCAGTATATCAGCCGCTGCTCTGTAT...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp TTCGCTGTTATAAAGAACTTCCAGCTTAAGGCAGTGAAGAGAGCTCTAGCCATCCACCATCTCCCTGAATaGCTGGGAGGCCTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: FAVIKNFQLKAVKRALAIHHLPE*LGGLVN
Trigger: GTTTACCAGGCCTCCCAGGCATTCAGGGAGATGGTG...GATGGCTAGAGCTCTCTTCACTGCCTTAAGCTGGAAGTTCTTTATAACAGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCCCTTTCTTTCCAGGGTaGCCTGAGATGCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIPFFPG*PEMPGR
Trigger: CCTTCCAGGCATCTCAGGGCACCCTGGAAAGAAAGG...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCGAAACCTGGAGGCCCTaGCTCACCCTTGGAACCTTT +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIETWRP*LTLGTF
Trigger: AAAGGTTCCAAGGGTGAGCCAGGGCCTCCAGGTTTC...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCGGGACCCCTAGGTCCTaGCAAACCAAGAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIGTPRS*QTKNPL
Trigger: AAGGGGATTCTTGGTTTGCCAGGACCTAGGGGTCCC...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGATCTCCTCTAAGGCCTaGAAGGCCCAGCACACCAGG +
Preference number: 4 (lower is better)
Translates to: KWNVSTRWMETGKQILAQISSKA*KAQHTR
Trigger: CCTGGTGTGCTGGGCCTTCCAGGCCTTAGAGGAGAT...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGAACTCCAGGAAACCCTaGCAATCCTGGGAGATGCAT +
Preference number: 4 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMNSRKP*QSWEMH
Trigger: ATGCATCTCCCAGGATTGCCAGGGTTTCCTGGAGTT...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTTATGCCAACTGGCCCTaGATCCCCTCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSYANWP*IPSVSF
Trigger: AAAGGAGACAGAGGGGATCCAGGGCCAGTTGGCATA...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACCTCCTTTGTCACCTCTaGGCCCAGGAAATCCATCCG +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYLLCHL*AQEIHP
Trigger: CGGATGGATTTCCTGGGCCCAGAGGTGACAAAGGAG...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCGGTGCCCTTGGTGCCTaGAAGTCCATTCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIGALGA*KSIQSM
Trigger: CATGGACTGAATGGACTTCCAGGCACCAAGGGCACC...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGTGGGGAATCTGGGTCTaGCCCACAGGCATCATGGGA +
Preference number: 4 (lower is better)
Translates to: KWNVSTRWMETGKQILAQWGIWV*PTGIMG
Trigger: TCCCATGATGCCTGTGGGCCAGACCCAGATTCCCCA...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
3UTR CAA 72 bp GGGACTTCTGAGGAATGGGGACATGAGCTTTACCTTTaGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: GTSEEWGHELYL*VPGLRSKTATS
Trigger: AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCCCCATTCCTCAGAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGACCCTTATCTCCTTTTaGTCCATATGGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMTLISF*SIWSQR
Trigger: CCTCTGGGACCATATGGATCAAAAGGAGATAAGGGT...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTCTCCTTTTACTCCTTTaGGGCCTTGATGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSALLLLL*GLDVLL
Trigger: CAAAAGGACATCAAGGCCTCAAAGGAGTAAAAGGAG...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCTTTTTGATCCTCTACTaGCAGTTGGTTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PITCKGALHVSGTDCVLRFLILY*QLVLLS
Trigger: AGAAAGGAGAACCAACTGTCAGTAGAGGATCAAAAA...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCACCTTTTTGTCCCTTTaGACCTTGTTTCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: KPITCKGALHVSGTDCVLTFLSL*TLFPWI
Trigger: GATCCAGGGAAACAAGGTTCAAAGGGACAAAAAGGT...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCGAACAGGCTCTCCTTTaGCACCTTTGTGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIEQALL*HLCDQA
Trigger: TGCCTGGTCACAAAGGTGCCAAAGGAGAGCCTGTTC...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACGCCCTGGCTCACCCTTaGAACCTTTCTTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYALAHP*NLSFLW
Trigger: CCAAAGGAAAGAAAGGTTCCAAGGGTGAGCCAGGGC...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACCGTCCTGAGTTTCCTTaGTCTCCTTTCAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYRPEFP*SPFRPG
Trigger: TCCTGGCCTGAAAGGAGACCAAGGAAACTCAGGACG...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGCAGCTTCTCCAAAGGTaGTACGTCCTGAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMQLLQR*YVLSFL
Trigger: AAGGAAACTCAGGACGTACCACCTTTGGAGAAGCTG...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACCCCAGGAAATCCTACTaGTCCAGAGGACCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYPRKSY*SRGPLF
Trigger: GAAAAGGGGTCCTCTGGACCAGTAGGATTTCCTGGG...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTACTAGATATGCCAACTaGCCCTGGATCCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTTRYAN*PWIPSV
Trigger: GACAGAGGGGATCCAGGGCCAGTTGGCATATCTAGT...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGAAATCCTGGGTCTCCTaGTTGCCCGATCTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KWNVSTRWMETGKQILAQKSWVS*LPDLAR
Trigger: CCTGGCAAGATCGGGCAACCAGGAGACCCAGGATTT...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp ATGTATTTCTCCTTCTGCCCTAGGCCAAGAAGAAGGAGAAGTGATTCTCATGTCGACTGTGTACAGCAATaGCTTGTGAGGGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: MYFSFCPRPRRRRSDSHVDCVQQ*LVRVPH
Trigger: GTGAGGCACCCTCACAAGCCATTGCTGTACACAGTC...GACATGAGAATCACTTCTCCTTCTTCTTGGCCTAGGGCAGAAGGAGAAATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGGGACAATGATGTCCTaGCTGTGTACAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTGTMMS*LCTAMA
Trigger: AGCCATTGCTGTACACAGTCAGGACATCATTGTCCC...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATACCCTTCCGGACCGGCTaGACCTTGAGTTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: SGYRLVSHSNTTACLNIIPFRTG*TLSSNW
Trigger: CCAATTGGAACTCAAGGTCCAGCCGGTCCGGAAGGG...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTAGCCAGGAACTCCAATaGGACCCTTATCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSSQELQ*DPYLLL
Trigger: CAAAAGGAGATAAGGGTCCCATTGGAGTTCCTGGCT...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp ATGTATTTCTCCTTCTGCCCTAGGCCAAGAAGAAGGAGAAGTGATTCTCATGTCCTTTCCCTGTCTCCCTaGATGGCCTTGTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: MYFSFCPRPRRRRSDSHVLSLSP*MALYSF
Trigger: GAAGGAATACAAGGCCATCCAGGGAGACAGGGAAAG...GACATGAGAATCACTTCTCCTTCTTCTTGGCCTAGGGCAGAAGGAGAAATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTTTTCCCTGGCATTCCTaGGAAACCTGCAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTFPWHS*ETCNPK
Trigger: CTTGGGATTGCAGGTTTCCCAGGAATGCCAGGGAAA...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTAGACCTGGGGAACCTTaGTCACCTTTTTGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GHELYLLVPGLRSKTATSRPGEP*SPFCPF
Trigger: AAAGGGACAAAAAGGTGACCAAGGTTCCCCAGGTCT...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACGAGGCCAGAGAAACCTaGAAGTCCTTGGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYEARET*KSLVSL
Trigger: AAGGGAAACCAAGGACTTCCAGGTTTCTCTGGCCTC...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGCAGACCCAAAGGTCCTaGAGGAACCTGCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: KWNVSTRWMETGKQILAQQTQRS*RNLHSF
Trigger: GAAGCTATGCAGGTTCCTCCAGGACCTTTGGGTCTG...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATAACCAAGGATTCCAGATaGGCCTGGAAGCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: SGYRLVSHSNTTACLNIITKDSR*AWKPTG
Trigger: CCCAGTGGGCTTCCAGGCCCATCTGGAATCCTTGGT...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp ATGTATTTCTCCTTCTGCCCTAGGCCAAGAAGAAGGAGAAGTGATTCTCATGTCGCAAATCCCAGATCCTaGTTATGGGCTTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: MYFSFCPRPRRRRSDSHVANPRS*LWAFSC
Trigger: GCAGGAGAAAGCCCATAACCAGGATCTGGGATTTGC...GACATGAGAATCACTTCTCCTTCTTCTTGGCCTAGGGCAGAAGGAGAAATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACAAAGGTGGTACGTCCTaGGTTTCCTTGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYKGGTS*VSLVSF
Trigger: AAAGGAGACCAAGGAAACTCAGGACGTACCACCTTT...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCACCTCTTTTTCCAGTTaGTCCAGGCTGACCTATGTC +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHITSFSS*SRLTYV
Trigger: GACATAGGTCAGCCTGGATCAACTGGAAAAAGAGGT...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR TCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACGTCTCCATTCATACCTaGAATCCCTTGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYVSIHT*NPLKSW
Trigger: CCAGGACTTCAAGGGATTTCAGGTATGAATGGAGAC...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACTCCTGGTGGTCCAATTaGACCATCATGGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYSWWSN*TIMAFF
Trigger: GAAAAAGGCCATGATGGTCCAATTGGACCACCAGGA...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGCAGCCCAATTCCTGGTaGTCCAATTGGACCATCATG +
Preference number: 4 (lower is better)
Translates to: KWNVSTRWMETGKQILAQQPNSW*SNWTIM
Trigger: CATGATGGTCCAATTGGACCACCAGGAATTGGGCTG...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGTCCGATGACAATTCCTaGCACTCCCCTTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: KWNVSTRWMETGKQILAQSDDNS*HSPFPF
Trigger: AAAGGGGAAAGGGGAGTGCCAGGAATTGTCATCGGA...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTATTTATCATTGCGTCTaGCATAGTGGCACACTTCAT +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSAIYHCV*HSGTLH
Trigger: ATGAAGTGTGCCACTATGCCAGACGCAATGATAAAT...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR GCA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGAGTAAGATTTATCATTaGGTCTGGCATAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMSKIYH*VWHSGT
Trigger: TGTGCCACTATGCCAGACGCAATGATAAATCTTACT...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTACTCCTTTTTCTCCTTaGAAACCTAACCCCATATTT +
Preference number: 4 (lower is better)
Translates to: QTEGSILHGQLRMYLGSATPFSP*KPNPIF
Trigger: AAATATGGGGTTAGGTTTCCAAGGAGAAAAAGGAGT...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCATTCTGCCAGTTCTTTaGTCAAGCATAAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIILPVL*SSIRKP
Trigger: TGGTTTCCTTATGCTTGACCAAAGAACTGGCAGAAT...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CCA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGATCACCTTTGTTTCCTaGGTAACCTCTATCACCAAC +
Preference number: 4 (lower is better)
Translates to: KWNVSTRWMETGKQILAQITFVS*VTSITN
Trigger: GTTGGTGATAGAGGTTACCCAGGAAACAAAGGTGAT...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp TTTCCCCTTTGGGACCAGGCAGGCCAGCCGGCCCAGGAACACCAGTaGTACTGGCTCCTGGAGTGCCATGGGTGCCCTTGGTGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: FPLWDQAGQPAQEHQ*YWLLECHGCPWCLE
Trigger: TTCCAGGCACCAAGGGCACCCATGGCACTCCAGGAGCCAGTATCACTGGTGTTCCTGGGCCGGCTGGCCTGCCTGGTCCCAAAGGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp TGGACTCCCAGGCCCTCCTTTGCTTCCGTGAGTGCCAGGCTTGCCTaGAATTCCAGGGAGGCCCCGAGCTCCCTTAGAGCCTGGGAATCC +
Preference number: 5 (lower is better)
Translates to: WTPRPSFASVSARLA*NSREAPSSLRAWES
Trigger: GGATTCCCAGGCTCTAAGGGAGCTCGGGGCCTCCCTGGAATTCCAGGCAAGCCTGGCACTCACGGAAGCAAAGGAGGGCCTGGGAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 90 bp CTCCCTGAATGCCTGGGAGGCCTGGTAAACCTGGTCTTCCATCCTTaGCCGGAGTTCCTGCCAAACCTGGGGTACCCTGAGGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: LPECLGGLVNLVFHP*PEFLPNLGYPEDQG
Trigger: ACCCTGGTCCTCAGGGTACCCCAGGTTTGGCAGGAACTCCGGGCAAGGATGGAAGACCAGGTTTACCAGGCCTCCCAGGCATTCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 90 bp GCAATCCTGGGAGATGCATTAACCCTGGACTCCCAGGCCCTCCTTTaGTTCCGTGAGTGCCAGGCTTGCCTGGAATTCCAGGGAGGCCCC +
Preference number: 5 (lower is better)
Translates to: AILGDALTLDSQALL*FRECQACLEFQGGP
Trigger: GGGGCCTCCCTGGAATTCCAGGCAAGCCTGGCACTCACGGAAGCAAAGGAGGGCCTGGGAGTCCAGGGTTAATGCATCTCCCAGGATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp AGGTCCTGGAGGAACCTGCATAGCTTCAGCAATTGGTGTGTGTCCTaGAGCTCCCTGTGGGCCGGAAAAGCCTCTTGGCCCCGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RSWRNLHSFSNWCVS*SSLWAGKASWPRLP
Trigger: GGGAAGGCGGGGCCAAGAGGCTTTTCCGGCCCACAGGGAGCTCCAGGACACACACCAATTGCTGAAGCTATGCAGGTTCCTCCAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 90 bp TTCCAGATGGGCCTGGAAGCCCACTGGGGCCATCCTTACCAGGGATaGCAGGTAGGCCTTTGGAACCTTGCAGACCCACAGAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: FQMGLEAHWGHPYQG*QVGLWNLADPQSLE
Trigger: CTCAAGGCTCTGTGGGTCTGCAAGGTTCCAAAGGCCTACCTGGCATCCCTGGTAAGGATGGCCCCAGTGGGCTTCCAGGCCCATCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp AGACCTGTTAATGATGGGAGGCCAGGGGTTCCAGAAGGGCCACGTTaGCCTTGGACGCCTTCATCTCCTCTAAGGCCTGGAAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RPVNDGRPGVPEGPR*PWTPSSPLRPGRPS
Trigger: GCTGGGCCTTCCAGGCCTTAGAGGAGATGAAGGCGTCCAAGGCCAACGTGGCCCTTCTGGAACCCCTGGCCTCCCATCATTAACAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 90 bp GGCCTGATGGGCCTGGCAGGCCTGGTAAACCTGGTAAACCAACCCTaGCAGGTAGGCCAGCTTCTCCAAAGGTGGTACGTCCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: GLMGLAGLVNLVNQP*QVGQLLQRWYVLSF
Trigger: GAAACTCAGGACGTACCACCTTTGGAGAAGCTGGCCTACCTGGCAGGGTTGGTTTACCAGGTTTACCAGGCCTGCCAGGCCCATCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp CCAGCCGGCCCAGGAACACCAGTGATACTGGCTCCTGGAGTGCCATaGGTGCCCTTGGTGCCTGGAAGTCCATTCAGTCCATGTAAACCA +
Preference number: 5 (lower is better)
Translates to: PAGPGTPVILAPGVP*VPLVPGSPFSPCKP
Trigger: TGGTTTACATGGACTGAATGGACTTCCAGGCACCAAGGGCACCCATGGCACTCCAGGAGCCAGTATCACTGGTGTTCCTGGGCCGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp GGAGACCAGGATCACCAAGGATTCCAGATGGGCCTGGAAGCCCACTaGGGCCATCCTTACCAGGGATGCCAGGTAGGCCTTTGGAACCTT +
Preference number: 5 (lower is better)
Translates to: GDQDHQGFQMGLEAH*GHPYQGCQVGLWNL
Trigger: AAGGTTCCAAAGGCCTACCTGGCATCCCTGGTAAGGATGGCCCCAGTGGGCTTCCAGGCCCATCTGGAATCCTTGGTGATCCTGGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGATTGCCCCGCTCACCCTaGGGGCCTAGCATACCAGGT +
Preference number: 5 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGLPRSP*GPSIPG
Trigger: ACCTGGTATGCTAGGCCCCAAGGGTGAGCGGGGCAA...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp TCTAAGGCCTGGAAGGCCCAGCACACCAGGGTCTCCAGGATAACCTaGGATCACAGCGCCATCTGCATCAGTGAAACTGTCTGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SKAWKAQHTRVSRIT*DHSAICISETVWAS
Trigger: CGAGGCCCAGACAGTTTCACTGATGCAGATGGCGCTGTGATCTCAGGTTATCCTGGAGACCCTGGTGTGCTGGGCCTTCCAGGCCTTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp GATACCAGTTGCTCCCAGGAGGCCAGAAGTCCCAGTGAGCCCCTGTaGACCGCTTTTCCCTGGCATTCCTGGGAAACCTGCAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: DTSCSQEARSPSEPL*TAFPWHSWETCNPK
Trigger: CTTGGGATTGCAGGTTTCCCAGGAATGCCAGGGAAAAGCGGTTCACAGGGGCTCACTGGGACTTCTGGCCTCCTGGGAGCAACTGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp TTGAGTTCCATTACAGCCATCTGGGCCAGGTGGACCTCTTGGACCTaGCTGTCCAGGGTGGCCCGGAATACCACTGATGCCAACAAAGCC +
Preference number: 5 (lower is better)
Translates to: LSSITAIWARWTSWT*LSRVARNTTDANKA
Trigger: GGCTTTGTTGGCATCAGTGGTATTCCGGGCCACCCTGGACAGCCAGGTCCAAGAGGTCCACCTGGCCCAGATGGCTGTAATGGAACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp TTAAACCTGGGATACCAGTTGCTCCCAGGAGGCCAGAAGTCCCAGTaGGCCCCTGTGAACCGCTTTTCCCTGGCATTCCTGGGAAACCTG +
Preference number: 5 (lower is better)
Translates to: LNLGYQLLPGGQKSQ*APVNRFSLAFLGNL
Trigger: CAGGTTTCCCAGGAATGCCAGGGAAAAGCGGTTCACAGGGGCTCACTGGGACTTCTGGCCTCCTGGGAGCAACTGGTATCCCAGGTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp GAGAGGCCAGAGAAACCTGGAAGTCCTTGGTTTCCCTTGAACCCTTaGAGGCCTGGAATCCCAGGGAAGCCAGAGTCTCCAGGATCGCCT +
Preference number: 5 (lower is better)
Translates to: ERPEKPGSPWFPLNP*RPGIPGKPESPGSP
Trigger: AGGCGATCCTGGAGACTCTGGCTTCCCTGGGATTCCAGGCCTTCAAGGGTTCAAGGGAAACCAAGGACTTCCAGGTTTCTCTGGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 90 bp GGGATACCATCAATGCCTGGCAGACCCAAAGGTCCTGGAGGAACCTaGATAGCTTCAGCAATTGGTGTGTGTCCTGGAGCTCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GIPSMPGRPKGPGGT*IASAIGVCPGAPCG
Trigger: CCCACAGGGAGCTCCAGGACACACACCAATTGCTGAAGCTATGCAGGTTCCTCCAGGACCTTTGGGTCTGCCAGGCATTGATGGTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCCTGATGTTCCAGGGTaGCCCCGCTCACCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: KPITCKGALHVSGTDCVLPDVPG*PRSPLG
Trigger: CCCCAAGGGTGAGCGGGGCAACCCTGGAACATCAGG...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 90 bp CGGACCGGCTGGACCTTGAGTTCCAATTGGTCCAGGGTGCCCTCTTaGTCCTTTCTCAGGAAAGCATGTACAGACTCCATGGCAATCTCG +
Preference number: 5 (lower is better)
Translates to: RTGWTLSSNWSRVPS*SFLRKACTDSMAIS
Trigger: CGAGATTGCCATGGAGTCTGTACATGCTTTCCTGAGAAAGGAGCAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTCCAGCCGGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp GGAGGTCCTGGCAGCCCAATTCCTGGTGGTCCAATTGGACCATCATaGCCTTTTTCACCAGGAAGTCCTGGTAACCCTCTTTCACCTGGG +
Preference number: 5 (lower is better)
Translates to: GGPGSPIPGGPIGPS*PFSPGSPGNPLSPG
Trigger: CCCAGGTGAAAGAGGGTTACCAGGACTTCCTGGTGAAAAAGGCCATGATGGTCCAATTGGACCACCAGGAATTGGGCTGCCAGGACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp CCACGAAGAGCAAGCTGTAACCCACCCAGAGCCGGCTCATCCCAGTaGGGCATAGTGGCACCTGTTCTGACTGACTGTGTTTTACTAGTG +
Preference number: 5 (lower is better)
Translates to: PRRASCNPPRAGSSQ*GIVAPVLTDCVLLV
Trigger: CACTAGTAAAACACAGTCAGTCAGAACAGGTGCCACTATGCCCCACTGGGATGAGCCGGCTCTGGGTGGGTTACAGCTTGCTCTTCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGAGGCCCTGGCTCACCCTaGGAACCTTTCTTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGGPGSP*EPFFPL
Trigger: CAAAGGAAAGAAAGGTTCCAAGGGTGAGCCAGGGCC...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCCCTGGTCTTCCATCCTaGCCCGGAGTTCCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: PITCKGALHVSGTDCVLRPGLPS*PGVPAK
Trigger: TTTGGCAGGAACTCCGGGCAAGGATGGAAGACCAGG...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCCGCGGTACCAGCAGGACCTaGAAGACCTGGGGAACCTTG +
Preference number: 5 (lower is better)
Translates to: PITCKGALHVSGTDCVLRGTSRT*KTWGTL
Trigger: CAAGGTTCCCCAGGTCTTCAAGGTCCTGCTGGTACC...GCGGAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp GATAAACCAGTTGGACCAGTAAACCCTTCCGGACCGGCTGGACCTTaGGTTCCAATTGGTCCAGGGTGCCCTCTTGCTCCTTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: DKPVGPVNPSGPAGP*VPIGPGCPLAPFSG
Trigger: TCCTGAGAAAGGAGCAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTCCAGCCGGTCCGGAAGGGTTTACTGGTCCAACTGGTTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp TATGAGGCCTGGGATACCATCAATGCCTGGCAGACCCAAAGGTCCTaGAGGAACCTGCATAGCTTCAGCAATTGGTGTGTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: YEAWDTINAWQTQRS*RNLHSFSNWCVSWS
Trigger: GCTCCAGGACACACACCAATTGCTGAAGCTATGCAGGTTCCTCCAGGACCTTTGGGTCTGCCAGGCATTGATGGTATCCCAGGCCTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp TTGAGACCCAGGGTCTCCTATGAGGCCTGGGATACCATCAATGCCTaGCAGACCCAAAGGTCCTGGAGGAACCTGCATAGCTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: LRPRVSYEAWDTINA*QTQRSWRNLHSFSN
Trigger: ATTGCTGAAGCTATGCAGGTTCCTCCAGGACCTTTGGGTCTGCCAGGCATTGATGGTATCCCAGGCCTCATAGGAGACCCTGGGTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp CAGGGTCTCCAGGATAACCTGAGATCACAGCGCCATCTGCATCAGTaGAACTGTCTGGGCCTCGAACACCAATGTCTCCCTTTTCACCCT +
Preference number: 5 (lower is better)
Translates to: QGLQDNLRSQRHLHQ*NCLGLEHQCLPFHP
Trigger: AGGGTGAAAAGGGAGACATTGGTGTTCGAGGCCCAGACAGTTTCACTGATGCAGATGGCGCTGTGATCTCAGGTTATCCTGGAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp GATGGACCATATGACCCAGGAATGATACAAGGCAAGGTGACTCCTTaGGCTCCACGGAGGCCTTGTTGCCCTGGTAACCCATCTACTCCT +
Preference number: 5 (lower is better)
Translates to: DGPYDPGMIQGKVTP*APRRPCCPGNPSTP
Trigger: AGGAGTAGATGGGTTACCAGGGCAACAAGGCCTCCGTGGAGCTCAAGGAGTCACCTTGCCTTGTATCATTCCTGGGTCATATGGTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp CCGAAGCACCATTTTCAGCACCAAATATGTCACCAGCAGCTCCCTTaGAACCTGGTAACCCTGGACTGCCAGCTTTCCCAGGGTAGCCAT +
Preference number: 5 (lower is better)
Translates to: PKHHFQHQICHQQLP*NLVTLDCQLSQGSH
Trigger: ATGGCTACCCTGGGAAAGCTGGCAGTCCAGGGTTACCAGGTTTCAAGGGAGCTGCTGGTGACATATTTGGTGCTGAAAATGGTGCTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 90 bp TGTCCCTTGGGTCCTGGGCTTCCAGAAATGCCAAGTGTTTGGCCTTaGTCTCCTTTTAAACCTGGGATACCAGTTGCTCCCAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: CPLGPGLPEMPSVWP*SPFKPGIPVAPRRP
Trigger: TGGCCTCCTGGGAGCAACTGGTATCCCAGGTTTAAAAGGAGATCAAGGCCAAACACTTGGCATTTCTGGAAGCCCAGGACCCAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp AGTGACAGCTTAGCACACCTTCCTAAGGTAGCCATGAGTAATCACACACATATCGGCCAGGTGGACCTCTaGGACCTGGCTGTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SDSLAHLPKVAMSNHTHIGQVDL*DLAVQG
Trigger: ACCCTGGACAGCCAGGTCCAAGAGGTCCACCTGGCC...GATATGTGTGTGATTACTCATGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp GCTCAGGCCTTCCTTTCTCAGACTGTTGAGGTGAGTGTTGTGAGGTGGGCTGGATCCTGTAATGCTGCCTaGAAAAGGAACAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: AQAFLSQTVEVSVVRWAGSCNAA*KRNRLS
Trigger: GGAGAGCCTGTTCCTTTTCAAGGCAGCATTACAGGA...TCCAGCCCACCTCACAACACTCACCTCAACAGTCTGAGAAAGGAAGGCCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGTCCAGAAGGGCCACGTaGGCCTTGGACGCCTTCATC +
Preference number: 5 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMSRRAT*ALDAFI
Trigger: GATGAAGGCGTCCAAGGCCAACGTGGCCCTTCTGGA...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTACTCCCCTTTCCCCTTaGGGACCAGGCAGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTTPLSP*GPGRPA
Trigger: GGCTGGCCTGCCTGGTCCCAAAGGGGAAAGGGGAGT...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCTTCCCATTCAAACCCTaGGGTCCTGGAAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: KPITCKGALHVSGTDCVLFPFKP*GPGRPE
Trigger: CTCTGGCCTTCCAGGACCCAAGGGTTTGAATGGGAA...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTCCTGGTTGCCCGATCTaGCCAGGAGTCCCCATGAGG +
Preference number: 5 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTPGCPI*PGVPMR
Trigger: CCTCATGGGGACTCCTGGCAAGATCGGGCAACCAGG...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACCGGACCGGCTGGACCTaGAGTTCCAATTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYRTGWT*SSNWSR
Trigger: CCTGGACCAATTGGAACTCAAGGTCCAGCCGGTCCG...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACAGGCAAGGTGACTCCTaGAGCTCCACGGAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYRQGDS*SSTEAL
Trigger: CAAGGCCTCCGTGGAGCTCAAGGAGTCACCTTGCCT...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp TTCGCTGTTATAAAGAACTTCCAGCTTAAGGCAGTGAAGAGAGCTCTAGCCATCGTGCCATGGGTGCCCTaGGTGCCTGGAAGTCCATTC +
Preference number: 5 (lower is better)
Translates to: FAVIKNFQLKAVKRALAIVPWVP*VPGSPF
Trigger: GAATGGACTTCCAGGCACCAAGGGCACCCATGGCAC...GATGGCTAGAGCTCTCTTCACTGCCTTAAGCTGGAAGTTCTTTATAACAGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 90 bp AACCTAATTCTCCAGGCTGTCCCTTGGGTCCTGGGCTTCCAGAAATaGCAAGTGTTTGGCCTTGATCTCCTTTTAAACCTGGGATACCAG +
Preference number: 5 (lower is better)
Translates to: NLILQAVPWVLGFQK*QVFGLDLLLNLGYQ
Trigger: CTGGTATCCCAGGTTTAAAAGGAGATCAAGGCCAAACACTTGGCATTTCTGGAAGCCCAGGACCCAAGGGACAGCCTGGAGAATTAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp CTCAGGAAAGCATGTACAGACTCCATGGCAATCTCGGCTCCCACATaGCTTTCCATAGGACATCTTCTGTCCCGATTCTGCCAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LRKACTDSMAISAPT*LSIGHLLSRFCQFF
Trigger: AAAGAACTGGCAGAATCGGGACAGAAGATGTCCTATGGAAAGCCATGTGGGAGCCGAGATTGCCATGGAGTCTGTACATGCTTTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACTGGACCTTGTTCTCCTaGGAGACCAGGGAACCCAGG +
Preference number: 5 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYWTLFS*ETREPR
Trigger: CCTGGGTTCCCTGGTCTCCAAGGAGAACAAGGTCCA...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp ATGTATTTCTCCTTCTGCCCTAGGCCAAGAAGAAGGAGAAGTGATTCTCATGTCAACCTGGGATACCAGTaGCTCCCAGGAGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: MYFSFCPRPRRRRSDSHVNLGYQ*LPGGQK
Trigger: CTTCTGGCCTCCTGGGAGCAACTGGTATCCCAGGTT...GACATGAGAATCACTTCTCCTTCTTCTTGGCCTAGGGCAGAAGGAGAAATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTGTTTCCCTTGAACCCTaGAAGGCCTGGAATCCCAGG +
Preference number: 5 (lower is better)
Translates to: GHELYLLVPGLRSKTATSVSLEP*KAWNPR
Trigger: CCTGGGATTCCAGGCCTTCAAGGGTTCAAGGGAAAC...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 90 bp ATGGCTTTCCATAGGACATCTTCTGTCCCGATTCTGCCAGTTCTTTaGTCAAGCATAAGGAAACCAGGAACAGCCACAATCCAGGGTGCA +
Preference number: 5 (lower is better)
Translates to: MAFHRTSSVPILPVL*SSIRKPGTATIQGA
Trigger: TGCACCCTGGATTGTGGCTGTTCCTGGTTTCCTTATGCTTGACCAAAGAACTGGCAGAATCGGGACAGAAGATGTCCTATGGAAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTAGGCCAACATCCCCCTaGACTCCTTTTTCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GHELYLLVPGLRSKTATSRPTSP*TPFSPW
Trigger: CCAAGGAGAAAAAGGAGTCAAGGGGGATGTTGGCCT...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp TTGTCTAGGACCAAATACTGGCCTTTCAGCCTTTCCTACTCAAGATGGGGCATGAACCCAGGCTCTATGTaGGACAGATGTCCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: LSRTKYWPFSLSYSRWGMNPGSM*DRCPVS
Trigger: TGAGACTGGACATCTGTCCAACATAGAGCCTGGGTT...CATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCCTAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATAGTCCAGGGTGCCCTCTaGCTCCTTTCTCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: SGYRLVSHSNTTACLNIIVQGAL*LLSQES
Trigger: GCTTTCCTGAGAAAGGAGCAAGAGGGCACCCTGGAC...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTGAACCTTTCTTTCCTTaGGGGAATCCCATGAATTCT +
Preference number: 5 (lower is better)
Translates to: QTEGSILHGQLRMYLGSAEPFFP*GNPMNS
Trigger: AGAATTCATGGGATTCCCCAAAGGAAAGAAAGGTTC...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp AAGGAATCACAGCTCAGTTCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGGACCAGGGTCACCTTaGTCCCCTGACATTTTTGAT +
Preference number: 5 (lower is better)
Translates to: KESQLSSGYRLVSHSNTTGPGSP*SPDIFD
Trigger: ATCAAAAATGTCAGGGGACAAAGGTGACCCTGGTCC...AGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGAACTGAGCTGTGATTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTAATCCAGATGTGCCCTaGATGCCAAATGGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: GHELYLLVPGLRSKTATSNPDVP*MPNGSV
Trigger: TACTGACCCATTTGGCATCAAGGGCACATCTGGATT...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp GGACATGAGCTTTACCTTTTGGTTCCTGGACTCAGAAGCAAAACTGCTACCTCTACCTATGTCTCCTCTTaGACCTTTCTTTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GHELYLLVPGLRSKTATSTYVSS*TFLSRV
Trigger: CACCCTGGAAAGAAAGGTCAAAGAGGAGACATAGGT...AGAGGTAGCAGTTTTGCTTCTGAGTCCAGGAACCAAAAGGTAAAGCTCATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACAAGACCTGGGGAACCTaGGTCACCTTTTTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYKTWGT*VTFLSL
Trigger: AAGGGACAAAAAGGTGACCAAGGTTCCCCAGGTCTT...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CAAACAGAAGGCAGTATACTTCATGGCCAGCTCAGAATGTACCTCGGGTCTGCTCACACTTCATTGATGTaGCAGTATATGAAGGGCATG +
Preference number: 5 (lower is better)
Translates to: QTEGSILHGQLRMYLGSAHTSLM*QYMKGM
Trigger: CATGCCCTTCATATACTGCAACATCAATGAAGTGTG...AGCAGACCCGAGGTACATTCTGAGCTGGCCATGAAGTATACTGCCTTCTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp AAATGGAATGTTAGCACCAGATGGATGGAAACAGGAAAGCAAATCCTAGCACAGCTCTCTCCTCCACCGTaGTCAGCCAGAAACTGTACT +
Preference number: 5 (lower is better)
Translates to: KWNVSTRWMETGKQILAQLSPPP*SARNCT
Trigger: AGTACAGTTTCTGGCTGACAACGGTGGAGGAGAGAG...CTGTGCTAGGATTTGCTTTCCTGTTTCCATCCATCTGGTGCTAACATTCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATAGACCTTGAGTTCCAATaGGTCCAGGGTGCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SGYRLVSHSNTTACLNIIDLEFQ*VQGALL
Trigger: CAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTC...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp ATGTATTTCTCCTTCTGCCCTAGGCCAAGAAGAAGGAGAAGTGATTCTCATGTCTACTCCTTTGAGGCCTaGATGTCCTTTTGGACCTTG +
Preference number: 5 (lower is better)
Translates to: MYFSFCPRPRRRRSDSHVYSFEA*MSFWTL
Trigger: CAAGGTCCAAAAGGACATCAAGGCCTCAAAGGAGTA...GACATGAGAATCACTTCTCCTTCTTCTTGGCCTAGGGCAGAAGGAGAAATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp AAGCCAATCACCTGCAAGGGAGCGCTTCATGTCAGTGGAACTGATTGTGTTCTCGAGCCTTTTTCTCCTTaGAACCAAAGGTTTAGCATT +
Preference number: 5 (lower is better)
Translates to: KPITCKGALHVSGTDCVLEPFSP*NQRFSI
Trigger: AATGCTAAACCTTTGGTTCAAAGGAGAAAAAGGCTC...GAGAACACAATCAGTTCCACTGACATGAAGCGCTCCCTTGCAGGTGATTGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACGATTCTGCCAGTTCTTaGGTCAAGCATAAGGAAACC +
Preference number: 5 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYDSASS*VKHKET
Trigger: GGTTTCCTTATGCTTGACCAAAGAACTGGCAGAATC...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp TTCGCTGTTATAAAGAACTTCCAGCTTAAGGCAGTGAAGAGAGCTCTAGCCATCAAATCCAACAGCTCCTaGAGTTCCATTACAGCCATC +
Preference number: 5 (lower is better)
Translates to: FAVIKNFQLKAVKRALAIKSNSS*SSITAI
Trigger: GATGGCTGTAATGGAACTCAAGGAGCTGTTGGATTT...GATGGCTAGAGCTCTCTTCACTGCCTTAAGCTGGAAGTTCTTTATAACAGCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp CTTATATCTCTAGATGTGGGACCAGGGGACAGTGATTTGTCTAGGACCAAATACCACCTTTTTGTCCCTTaGAACCTTGTTTCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: LISLDVGPGDSDLSRTKYHLFVP*NLVSLD
Trigger: ATCCAGGGAAACAAGGTTCAAAGGGACAAAAAGGTG...GTATTTGGTCCTAGACAAATCACTGTCCCCTGGTCCCACATCTAGAGATATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS-3UTR CAA 90 bp TCTGGCTATAGGCTGGTTTCTCATTCCAACACTACTGCCTGTCTAAATATAATAGGCCTTGATGTCCTTTaGGACCTTGTTCTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: SGYRLVSHSNTTACLNIIGLDVL*DLVLLG
Trigger: TCCAAGGAGAACAAGGTCCAAAAGGACATCAAGGCC...TATTATATTTAGACAGGCAGTAGTGTTGGAATGAGAAACCAGCCTATAGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp GGCCTGGCCGCCCAGGGTCACCAGGCTGTCCTGCTATaGCTGAGGGCAAGGAGATGCCTGGGGCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GLAAQGHQAVLL*LRARRCLGLQG
Trigger: CCCCTGGAGCCCCAGGCATCTCCTTGCCCTCAGTCATAGCAGGACAGCCTGGTGACCCTGGGCGGCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp CCGTGCCCAGGCATCCCAGGCTGCCCAATGGGGCCCTaGTTTCCCGGAGCTCCTTCAAATCCTGGAGGTCCT +
Preference number: 6 (lower is better)
Translates to: PCPGIPGCPMGP*FPGAPSNPGGP
Trigger: AGGACCTCCAGGATTTGAAGGAGCTCCGGGAAATCAGGGCCCCATTGGGCAGCCTGGGATGCCTGGGCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp AGGCCCTCCTTTGCTTCCGTGAGTGCCAGGCTTGCCTaGAATTCCAGGGAGGCCCCGAGCTCCCTTAGAGCC +
Preference number: 6 (lower is better)
Translates to: RPSFASVSARLA*NSREAPSSLRA
Trigger: GGCTCTAAGGGAGCTCGGGGCCTCCCTGGAATTCCAGGCAAGCCTGGCACTCACGGAAGCAAAGGAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp CGCCTTCCCCTTCATCCCAGGAAATCCTGGGTCTCCTaGTTGCCCGATCTTGCCAGGAGTCCCCATGAGGCC +
Preference number: 6 (lower is better)
Translates to: RLPLHPRKSWVS*LPDLARSPHEA
Trigger: GGCCTCATGGGGACTCCTGGCAAGATCGGGCAACCAGGAGACCCAGGATTTCCTGGGATGAAGGGGAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp TCTTGGCCCCGCCTTCCCCTTCATCCCAGGAAATCCTaGGTCTCCTGGTTGCCCGATCTTGCCAGGAGTCCC +
Preference number: 6 (lower is better)
Translates to: SWPRLPLHPRKS*VSWLPDLARSP
Trigger: GGGACTCCTGGCAAGATCGGGCAACCAGGAGACCCAGGATTTCCTGGGATGAAGGGGAAGGCGGGGCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp TTTCACCCTTTTGGCCTTCGATGCCCGGCAACCCAGTaGCGCCTGACAAACCTGGGCTCCCCAGGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: FHPFGLRCPATQ*RLTNLGSPGSQ
Trigger: CTGGCTTCCTGGGGAGCCCAGGTTTGTCAGGCGTCACTGGGTTGCCGGGCATCGAAGGCCAAAAGGGTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp GGTCTCCTGGTTGCCCGATCTTGCCAGGAGTCCCCATaGGGCCAGGTTCCCCTCTCATGCCCTTTAGCCCTA +
Preference number: 6 (lower is better)
Translates to: GLLVARSCQESP*GQVPLSCPLAL
Trigger: TAGGGCTAAAGGGCATGAGAGGGGAACCTGGCCTCATGGGGACTCCTGGCAAGATCGGGCAACCAGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 72 bp TGCCTGGGAGGCCTGGTAAACCTGGTCTTCCATCCTTaGCCGGAGTTCCTGCCAAACCTGGGGTACCCTGAG +
Preference number: 6 (lower is better)
Translates to: CLGGLVNLVFHP*PEFLPNLGYPE
Trigger: CTCAGGGTACCCCAGGTTTGGCAGGAACTCCGGGCAAGGATGGAAGACCAGGTTTACCAGGCCTCCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp ATTACAGCCATCTGGGCCAGGTGGACCTCTTGGACCTaGCTGTCCAGGGTGGCCCGGAATACCACTGATGCC +
Preference number: 6 (lower is better)
Translates to: ITAIWARWTSWT*LSRVARNTTDA
Trigger: GGCATCAGTGGTATTCCGGGCCACCCTGGACAGCCAGGTCCAAGAGGTCCACCTGGCCCAGATGGCTGTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 90 bp TTCCCTGGATCTCCGATGACAATTCCTGGCACTCCCCTTTCCCCTTaGGGACCAGGCAGGCCAGCCGGCCCAGGAACACCAGTGATACTG +
Preference number: 6 (lower is better)
Translates to: FPGSPMTIPGTPLSP*GPGRPAGPGTPVIL
Trigger: CAGTATCACTGGTGTTCCTGGGCCGGCTGGCCTGCCTGGTCCCAAAGGGGAAAGGGGAGTGCCAGGAATTGTCATCGGAGATCCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp GGATACCAGTTGCTCCCAGGAGGCCAGAAGTCCCAGTaGGCCCCTGTGAACCGCTTTTCCCTGGCATTCCTG +
Preference number: 6 (lower is better)
Translates to: GYQLLPGGQKSQ*APVNRFSLAFL
Trigger: CAGGAATGCCAGGGAAAAGCGGTTCACAGGGGCTCACTGGGACTTCTGGCCTCCTGGGAGCAACTGGTATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp GCAGACCCACAGAGCCTTGAGACCCAGGGTCTCCTATaGGGCCTGGGATACCATCAATGCCTGGCAGACCCA +
Preference number: 6 (lower is better)
Translates to: ADPQSLETQGLL*GLGYHQCLADP
Trigger: TGGGTCTGCCAGGCATTGATGGTATCCCAGGCCTCATAGGAGACCCTGGGTCTCAAGGCTCTGTGGGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 72 bp GGCCTGGCAGGCCTGGTAAACCTGGTAAACCAACCCTaGCAGGTAGGCCAGCTTCTCCAAAGGTGGTACGTC +
Preference number: 6 (lower is better)
Translates to: GLAGLVNLVNQP*QVGQLLQRWYV
Trigger: GACGTACCACCTTTGGAGAAGCTGGCCTACCTGGCAGGGTTGGTTTACCAGGTTTACCAGGCCTGCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 72 bp CAGGCTCTATGTTGGACAGATGTCCAGTCTCAAATGTaGGACCAGGTGGGCCTGATGGGCCTGGCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: QALCWTDVQSQM*DQVGLMGLAGL
Trigger: CAGGCCTGCCAGGCCCATCAGGCCCACCTGGTCGCACATTTGAGACTGGACATCTGTCCAACATAGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp TGGGGCCATCCTTACCAGGGATGCCAGGTAGGCCTTTaGAACCTTGCAGACCCACAGAGCCTTGAGACCCAG +
Preference number: 6 (lower is better)
Translates to: WGHPYQGCQVGL*NLADPQSLETQ
Trigger: CTGGGTCTCAAGGCTCTGTGGGTCTGCAAGGTTCCAAAGGCCTACCTGGCATCCCTGGTAAGGATGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp GGTGGTCCTGATGTTCCAGGGTTGCCCCGCTCACCCTaGGGGCCTAGCATACCAGGTTTCCCATTCAAACCC +
Preference number: 6 (lower is better)
Translates to: GGPDVPGLPRSP*GPSIPGFPFKP
Trigger: GGGTTTGAATGGGAAACCTGGTATGCTAGGCCCCAAGGGTGAGCGGGGCAACCCTGGAACATCAGGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 90 bp GAGATGCCTGGAAGGCCTGGTGCTCCTGGGAATCCAGATGTGCCCTaGATGCCAAATGGGTCAGTAGACCCTGAGGGTCCTGGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: EMPGRPGAPGNPDVP*MPNGSVDPEGPGCP
Trigger: AGGACAGCCAGGACCCTCAGGGTCTACTGACCCATTTGGCATCAAGGGCACATCTGGATTCCCAGGAGCACCAGGCCTTCCAGGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp GTTGGACCAGTAAACCCTTCCGGACCGGCTGGACCTTaGGTTCCAATTGGTCCAGGGTGCCCTCTTGCTCCT +
Preference number: 6 (lower is better)
Translates to: VGPVNPSGPAGP*VPIGPGCPLAP
Trigger: AGGAGCAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTCCAGCCGGTCCGGAAGGGTTTACTGGTCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp TTGGACCTGGCTGTCCAGGGTGGCCCGGAATACCACTaGTGCCAACAAAGCCAGGAACTCCAATGGGACCCT +
Preference number: 6 (lower is better)
Translates to: LDLAVQGGPEYH*CQQSQELQWDP
Trigger: AGGGTCCCATTGGAGTTCCTGGCTTTGTTGGCATCAGTGGTATTCCGGGCCACCCTGGACAGCCAGGTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp AGAGGAACCTGGGAGGCCTGGGTCTCCATTCATACCTaGAATCCCTTGAAGTCCTGGGGAGCCAGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: RGTWEAWVSIHT*NPLKSWGAREA
Trigger: GGCTTCCCTGGCTCCCCAGGACTTCAAGGGATTTCAGGTATGAATGGAGACCCAGGCCTCCCAGGTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp TGGCTTGTGAGGGTGCCTCACATACAGAGCAGCGGCTaGTATACTGGGGAATCTGGGTCTGGCCCACAGGCA +
Preference number: 6 (lower is better)
Translates to: WLVRVPHIQSSG*YTGESGSGPQA
Trigger: TGCCTGTGGGCCAGACCCAGATTCCCCAGTATATCAGCCGCTGCTCTGTATGTGAGGCACCCTCACAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp GTTTTCATACACACCTGGCAGCGGCTCACCCTGGTGTaGAGCTGCCCAGTTTTCAGCGTCTCAGACACGGGC +
Preference number: 6 (lower is better)
Translates to: VFIHTWQRLTLV*SCPVFSVSDTG
Trigger: GCCCGTGTCTGAGACGCTGAAAACTGGGCAGCTTCACACCAGGGTGAGCCGCTGCCAGGTGTGTATGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 72 bp GGAGATGCATTAACCCTGGACTCCCAGGCCCTCCTTTaGTTCCGTGAGTGCCAGGCTTGCCTGGAATTCCAG +
Preference number: 6 (lower is better)
Translates to: GDALTLDSQALL*FRECQACLEFQ
Trigger: CTGGAATTCCAGGCAAGCCTGGCACTCACGGAAGCAAAGGAGGGCCTGGGAGTCCAGGGTTAATGCATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp GTGGTCCTGATGTTCCAGGGTTGCCCCGCTCACCCTTaGGGCCTAGCATACCAGGTTTCCCATTCAAACCCT +
Preference number: 6 (lower is better)
Translates to: VVLMFQGCPAHP*GLAYQVSHSNP
Trigger: AGGGTTTGAATGGGAAACCTGGTATGCTAGGCCCCAAGGGTGAGCGGGGCAACCCTGGAACATCAGGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp CCAGGAACACCAGTGATACTGGCTCCTGGAGTGCCATaGGTGCCCTTGGTGCCTGGAAGTCCATTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: PGTPVILAPGVP*VPLVPGSPFSP
Trigger: TGGACTGAATGGACTTCCAGGCACCAAGGGCACCCATGGCACTCCAGGAGCCAGTATCACTGGTGTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp AGGAACCTGCATAGCTTCAGCAATTGGTGTGTGTCCTaGAGCTCCCTGTGGGCCGGAAAAGCCTCTTGGCCC +
Preference number: 6 (lower is better)
Translates to: RNLHSFSNWCVS*SSLWAGKASWP
Trigger: GGGCCAAGAGGCTTTTCCGGCCCACAGGGAGCTCCAGGACACACACCAATTGCTGAAGCTATGCAGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp CACAGAGCCTTGAGACCCAGGGTCTCCTATGAGGCCTaGGATACCATCAATGCCTGGCAGACCCAAAGGTCC +
Preference number: 6 (lower is better)
Translates to: HRALRPRVSYEA*DTINAWQTQRS
Trigger: GGACCTTTGGGTCTGCCAGGCATTGATGGTATCCCAGGCCTCATAGGAGACCCTGGGTCTCAAGGCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp GCAAGCTGTAACCCACCCAGAGCCGGCTCATCCCAGTaGGGCATAGTGGCACCTGTTCTGACTGACTGTGTT +
Preference number: 6 (lower is better)
Translates to: ASCNPPRAGSSQ*GIVAPVLTDCV
Trigger: AACACAGTCAGTCAGAACAGGTGCCACTATGCCCCACTGGGATGAGCCGGCTCTGGGTGGGTTACAGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp AGTTGGACCAGTAAACCCTTCCGGACCGGCTGGACCTaGAGTTCCAATTGGTCCAGGGTGCCCTCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: SWTSKPFRTGWT*SSNWSRVPSCS
Trigger: GGAGCAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTCCAGCCGGTCCGGAAGGGTTTACTGGTCCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp GGAAGGCCTGGTGCTCCTGGGAATCCAGATGTGCCCTaGATGCCAAATGGGTCAGTAGACCCTGAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: GRPGAPGNPDVP*MPNGSVDPEGP
Trigger: AGGACCCTCAGGGTCTACTGACCCATTTGGCATCAAGGGCACATCTGGATTCCCAGGAGCACCAGGCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 90 bp CCAGGAACACCAGTGATACTGGCTCCTGGAGTGCCATGGGTGCCCTaGGTGCCTGGAAGTCCATTCAGTCCATGTAAACCAGGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: PGTPVILAPGVPWVP*VPGSPFSPCKPGAP
Trigger: TGGAGCTCCTGGTTTACATGGACTGAATGGACTTCCAGGCACCAAGGGCACCCATGGCACTCCAGGAGCCAGTATCACTGGTGTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 90 bp AGAGAGGCCAGAGAAACCTGGAAGTCCTTGGTTTCCCTTGAACCCTaGAAGGCCTGGAATCCCAGGGAAGCCAGAGTCTCCAGGATCGCC +
Preference number: 6 (lower is better)
Translates to: REARETWKSLVSLEP*KAWNPREARVSRIA
Trigger: GGCGATCCTGGAGACTCTGGCTTCCCTGGGATTCCAGGCCTTCAAGGGTTCAAGGGAAACCAAGGACTTCCAGGTTTCTCTGGCCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp TCCTTGCCCGGAGTTCCTGCCAAACCTGGGGTACCCTaGGGACCAGGGTCACCTTTGTCCCCTGACATTTTT +
Preference number: 6 (lower is better)
Translates to: SLPGVPAKPGVP*GPGSPLSPDIF
Trigger: AAAAATGTCAGGGGACAAAGGTGACCCTGGTCCTCAGGGTACCCCAGGTTTGGCAGGAACTCCGGGCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp AGAGGCTGTGCCAGCCCAGAGGGCACTGTGGGACAATaGTGTCCTGACTGTGTACAGCAATGGCTTGTGAGG +
Preference number: 6 (lower is better)
Translates to: RGCASPEGTVGQ*CPDCVQQWLVR
Trigger: CCTCACAAGCCATTGCTGTACACAGTCAGGACATCATTGTCCCACAGTGCCCTCTGGGCTGGCACAGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp TGGAAGTCCTTGGTTTCCCTTGAACCCTTGAAGGCCTaGAATCCCAGGGAAGCCAGAGTCTCCAGGATCGCC +
Preference number: 6 (lower is better)
Translates to: WKSLVSLEPLKA*NPREARVSRIA
Trigger: GGCGATCCTGGAGACTCTGGCTTCCCTGGGATTCCAGGCCTTCAAGGGTTCAAGGGAAACCAAGGACTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp AGGGTCTCCTATGAGGCCTGGGATACCATCAATGCCTaGCAGACCCAAAGGTCCTGGAGGAACCTGCATAGC +
Preference number: 6 (lower is better)
Translates to: RVSYEAWDTINA*QTQRSWRNLHS
Trigger: GCTATGCAGGTTCCTCCAGGACCTTTGGGTCTGCCAGGCATTGATGGTATCCCAGGCCTCATAGGAGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 90 bp CCGGACCGGCTGGACCTTGAGTTCCAATTGGTCCAGGGTGCCCTCTaGCTCCTTTCTCAGGAAAGCATGTACAGACTCCATGGCAATCTC +
Preference number: 6 (lower is better)
Translates to: PDRLDLEFQLVQGAL*LLSQESMYRLHGNL
Trigger: GAGATTGCCATGGAGTCTGTACATGCTTTCCTGAGAAAGGAGCAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTCCAGCCGGTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp CTTTCCCTGTCTCCCTGGATGGCCTTGTATTCCTTCTaGACCCATGGGACCCCTAGGTCCTGGCAAACCAAG +
Preference number: 6 (lower is better)
Translates to: LSLSPWMALYSF*THGTPRSWQTK
Trigger: CTTGGTTTGCCAGGACCTAGGGGTCCCATGGGTTCAGAAGGAATACAAGGCCATCCAGGGAGACAGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp AGAGGCCAGAGAAACCTGGAAGTCCTTGGTTTCCCTTaGACCCTTGAAGGCCTGGAATCCCAGGGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: RGQRNLEVLGFP*TLEGLESQGSQ
Trigger: CTGGCTTCCCTGGGATTCCAGGCCTTCAAGGGTTCAAGGGAAACCAAGGACTTCCAGGTTTCTCTGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp AAACCCTTCCGGACCGGCTGGACCTTGAGTTCCAATTaGTCCAGGGTGCCCTCTTGCTCCTTTCTCAGGAAA +
Preference number: 6 (lower is better)
Translates to: KPFRTGWTLSSN*SRVPSCSFLRK
Trigger: TTTCCTGAGAAAGGAGCAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTCCAGCCGGTCCGGAAGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp TCCTTTTTCTCCAGTAGATCCAAATTCCGGGACACCTaGAGGGCCACTCATTCCTGGGAAACCTGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: SFFSSRSKFRDT*RATHSWETWRP
Trigger: GGGCCTCCAGGTTTCCCAGGAATGAGTGGCCCTCCAGGTGTCCCGGAATTTGGATCTACTGGAGAAAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp CCAGTGATACTGGCTCCTGGAGTGCCATGGGTGCCCTaGGTGCCTGGAAGTCCATTCAGTCCATGTAAACCA +
Preference number: 6 (lower is better)
Translates to: PVILAPGVPWVP*VPGSPFSPCKP
Trigger: TGGTTTACATGGACTGAATGGACTTCCAGGCACCAAGGGCACCCATGGCACTCCAGGAGCCAGTATCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp TATGACCCAGGAATGATACAAGGCAAGGTGACTCCTTaGGCTCCACGGAGGCCTTGTTGCCCTGGTAACCCA +
Preference number: 6 (lower is better)
Translates to: YDPGMIQGKVTP*APRRPCCPGNP
Trigger: TGGGTTACCAGGGCAACAAGGCCTCCGTGGAGCTCAAGGAGTCACCTTGCCTTGTATCATTCCTGGGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 72 bp TCAATGCCTGGCAGACCCAAAGGTCCTGGAGGAACCTaGATAGCTTCAGCAATTGGTGTGTGTCCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: SMPGRPKGPGGT*IASAIGVCPGA
Trigger: AGCTCCAGGACACACACCAATTGCTGAAGCTATGCAGGTTCCTCCAGGACCTTTGGGTCTGCCAGGCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp CAGGATAACCTGAGATCACAGCGCCATCTGCATCAGTaGAACTGTCTGGGCCTCGAACACCAATGTCTCCCT +
Preference number: 6 (lower is better)
Translates to: QDNLRSQRHLHQ*NCLGLEHQCLP
Trigger: AGGGAGACATTGGTGTTCGAGGCCCAGACAGTTTCACTGATGCAGATGGCGCTGTGATCTCAGGTTATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp TGGGATACCATCAATGCCTGGCAGACCCAAAGGTCCTaGAGGAACCTGCATAGCTTCAGCAATTGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: WDTINAWQTQRS*RNLHSFSNWCV
Trigger: CACACACCAATTGCTGAAGCTATGCAGGTTCCTCCAGGACCTTTGGGTCTGCCAGGCATTGATGGTATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 90 bp GGTAATCCCCTTCTTCCCATAGATCCAGGAGAACCTGGCCTCCCATaGAGCCCTTTGATGGTATTGGTTTGTCCAGTAGCTCCAGGTGGA +
Preference number: 6 (lower is better)
Translates to: GNPLLPIDPGEPGLP*SPLMVLVCPVAPGG
Trigger: TCCACCTGGAGCTACTGGACAAACCAATACCATCAAAGGGCTCAATGGGAGGCCAGGTTCTCCTGGATCTATGGGAAGAAGGGGATTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp CATTTTCAGCACCAAATATGTCACCAGCAGCTCCCTTaGAACCTGGTAACCCTGGACTGCCAGCTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: HFQHQICHQQLP*NLVTLDCQLSQ
Trigger: CTGGGAAAGCTGGCAGTCCAGGGTTACCAGGTTTCAAGGGAGCTGCTGGTGACATATTTGGTGCTGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS TCA 72 bp TTTGTCCCTTTGAACCTTGTTTCCCTGGATCTCCGATaGCAATTCCTGGCACTCCCCTTTCCCCTTTGGGAC +
Preference number: 6 (lower is better)
Translates to: FVPLNLVSLDLR*QFLALPFPLWD
Trigger: GTCCCAAAGGGGAAAGGGGAGTGCCAGGAATTGTCATCGGAGATCCAGGGAAACAAGGTTCAAAGGGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS GCA 72 bp TGGACCTTGAGTTCCAATTGGTCCAGGGTGCCCTCTTaGTCCTTTCTCAGGAAAGCATGTACAGACTCCATG +
Preference number: 6 (lower is better)
Translates to: WTLSSNWSRVPS*SFLRKACTDSM
Trigger: CATGGAGTCTGTACATGCTTTCCTGAGAAAGGAGCAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp CTGGACCTTGAGTTCCAATTGGTCCAGGGTGCCCTCTaGCTCCTTTCTCAGGAAAGCATGTACAGACTCCAT +
Preference number: 6 (lower is better)
Translates to: LDLEFQLVQGAL*LLSQESMYRLH
Trigger: ATGGAGTCTGTACATGCTTTCCTGAGAAAGGAGCAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp GGAGGCCCTGGCTCACCCTTGGAACCTTTCTTTCCTTaGGGGAATCCCATGAATTCTAGTTCCCCAGTAGAT +
Preference number: 6 (lower is better)
Translates to: GGPGSPLEPFFP*GNPMNSSSPVD
Trigger: ATCTACTGGGGAACTAGAATTCATGGGATTCCCCAAAGGAAAGAAAGGTTCCAAGGGTGAGCCAGGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp TTTGAGGCCTTGATGTCCTTTTGGACCTTGTTCTCCTaGGAGACCAGGGAACCCAGGCTCTATGTTGGACAG +
Preference number: 6 (lower is better)
Translates to: FEALMSFWTLFS*ETREPRLYVGQ
Trigger: CTGTCCAACATAGAGCCTGGGTTCCCTGGTCTCCAAGGAGAACAAGGTCCAAAAGGACATCAAGGCCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp CCATTTTCAGCACCAAATATGTCACCAGCAGCTCCCTaGAAACCTGGTAACCCTGGACTGCCAGCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: PFSAPNMSPAAP*KPGNPGLPAFP
Trigger: TGGGAAAGCTGGCAGTCCAGGGTTACCAGGTTTCAAGGGAGCTGCTGGTGACATATTTGGTGCTGAAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp CTTCTTCCCATAGATCCAGGAGAACCTGGCCTCCCATaGAGCCCTTTGATGGTATTGGTTTGTCCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: LLPIDPGEPGLP*SPLMVLVCPVA
Trigger: AGCTACTGGACAAACCAATACCATCAAAGGGCTCAATGGGAGGCCAGGTTCTCCTGGATCTATGGGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 90 bp TTTTACTCCTTTGAGGCCTTGATGTCCTTTTGGACCTTGTTCTCCTaGGAGACCAGGGAACCCAGGCTCTATGTTGGACAGATGTCCAGT +
Preference number: 6 (lower is better)
Translates to: FYSFEALMSFWTLFS*ETREPRLYVGQMSS
Trigger: ACTGGACATCTGTCCAACATAGAGCCTGGGTTCCCTGGTCTCCAAGGAGAACAAGGTCCAAAAGGACATCAAGGCCTCAAAGGAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 90 bp GGAAATCCATCCGATCCAGCAGAACCTCGAGAGCCTTTTTCTCCTTaGAACCAAAGGTTTAGCATTGGAGGTCTTGGACTAGATATGCCA +
Preference number: 6 (lower is better)
Translates to: GNPSDPAEPREPFSP*NQRFSIGGLGLDMP
Trigger: TGGCATATCTAGTCCAAGACCTCCAATGCTAAACCTTTGGTTCAAAGGAGAAAAAGGCTCTCGAGGTTCTGCTGGATCGGATGGATTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CCA 72 bp CATAGGACATCTTCTGTCCCGATTCTGCCAGTTCTTTaGTCAAGCATAAGGAAACCAGGAACAGCCACAATC +
Preference number: 6 (lower is better)
Translates to: HRTSSVPILPVL*SSIRKPGTATI
Trigger: GATTGTGGCTGTTCCTGGTTTCCTTATGCTTGACCAAAGAACTGGCAGAATCGGGACAGAAGATGTCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3
CDS CAA 72 bp TCCGATCCAGCAGAACCTCGAGAGCCTTTTTCTCCTTaGAACCAAAGGTTTAGCATTGGAGGTCTTGGACTA +
Preference number: 6 (lower is better)
Translates to: SDPAEPREPFSP*NQRFSIGGLGL
Trigger: TAGTCCAAGACCTCCAATGCTAAACCTTTGGTTCAAAGGAGAAAAAGGCTCTCGAGGTTCTGCTGGATCGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101205.3