Pregenerated sensors for COL3A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026043Ensembl transcript IDs: ENSMUST00000087883.13, ENSMUST00000185687.2, ENSMUST00000186021.2
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACATTAGCACCTTAACATGTGTCTTTAAAGCCCTTCCAGATACTTaGAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTAAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: YISTLTCVFKALPDT*KFTSNSRREAPLKA Trigger: TGCTTTTAAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGTTAAGGTGCTAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTGTTGGTCACTTGCACTaGTTGATAAGATTAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFVGHLH*LIRLKQ Trigger: TTGTTTTAATCTTATCAACCAGTGCAAGTGACCAAC...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| 3UTR-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAAACAAGATGAACACATaGATGTGGTTTTTGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: NEYDRCSADGLEFKECNTNKMNT*MWFLFC Trigger: GCAAAACAAAAACCACATCCATGTGTTCATCTTGTT...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| 3UTR-3UTR CAA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTGATGTGGTTTTTGTTTaGCTGGGGTTTCAGAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFDVVFV*LGFQRV Trigger: AACTCTCTGAAACCCCAGCAAAACAAAAACCACATC...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| 3UTR-3UTR CAA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGATAAAACAAAAGCATTaGACCTGTATTGGGTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: EYDRCSADGLEFKECNTVIKQKH*TCIGWL Trigger: CAACCACCCAATACAGGTCAAATGCTTTTGTTTTAT...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| 3UTR-3UTR CAA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTAGGTCACTTGCACTGGTaGATAAGATTAAAACAAGAT | + |
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Preference number: 3 (lower is better) Translates to: YDRCSADGLEFKECNTVLGHLHW*IRLKQD Trigger: ATCTTGTTTTAATCTTATCAACCAGTGCAAGTGACC...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR TCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGGAACCCGGAGGACCCTaGGCACCAGGTGGCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVEPGGP*APGGPF Trigger: GAAGGGGCCACCTGGTGCTCAGGGTCCTCCGGGTTC...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTTGCCAGGAGCACCACTaGGTCCTGGGGGCCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFCQEHH*VLGALD Trigger: ATCCAGGGCCCCCAGGACCCAGTGGTGCTCCTGGCA...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR TCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCCTGCCGGACCAGCTTaGCCAGGTTCACCAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVPAGPA*PGSPGG Trigger: TCCCCCTGGTGAACCTGGTCAAGCTGGTCCGGCAGG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTTCCTGGAGGGCCTGGTaGACCAGCTGGTCCCGGATA | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFSWRAW*TSWSRI Trigger: TATCCGGGACCAGCTGGTCCACCAGGCCCTCCAGGA...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGCACCAGGAGGTCCTaGAGGGCCTGCCGGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRSTRRS*RACRTS Trigger: GCTGGTCCGGCAGGCCCTCCAGGACCTCCTGGTGCT...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGGCACCAGCATGTCCCTaGGGTCCAGGCTCCCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVAPACP*GPGSPL Trigger: AAGAGGGGAGCCTGGACCGCAGGGACATGCTGGTGC...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGAGGCCCAGGGAGACCTaGTTGTCCTGGAAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVRPRET*LSWKAR Trigger: CCTGGCCTTCCAGGACAACCAGGTCTCCCTGGGCCT...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTATTGCCTGGTCCACCTaGACTTCCGGGCATACCCCG | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFIAWST*TSGHTP Trigger: CGGGGTATGCCCGGAAGTCCAGGTGGACCAGGCAAT...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTCCAGGCTGACCAGCTaGGCCAGGGGGACCAATAGG | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVSRLTS*ARGTNR Trigger: CCTATTGGTCCCCCTGGCCCAGCTGGTCAGCCTGGA...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTACCTGGCATGCCTGGTaGTCCAGCAAGACCTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFTWHAW*SSKTSC Trigger: GCACGAGGTCTTGCTGGACCACCAGGCATGCCAGGT...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTTGGACCTGGCATGCCTaGTGGTCCAGCAAGACCTCG | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFWTWHA*WSSKTS Trigger: CGAGGTCTTGCTGGACCACCAGGCATGCCAGGTCCA...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTAAGGTCCTGGAGGGCCTaGCGGACCAGCTTGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLRSWRA*RTSLTR Trigger: CCTGGTCAAGCTGGTCCGGCAGGCCCTCCAGGACCT...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGAGCACCAGGGATTCCTaGTGTTCCAGGAGGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVSTRDS*CSRRPT Trigger: CGTGGGCCTCCTGGAACAGCAGGAATCCCTGGTGCT...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCAGGAGAACCACTGTTaGCTGCAGGACCTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVQENHC*LQDLEG Trigger: GCCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGACCCGTGGACCTGGCATaGCTGGTGGTCCAGCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRPVDLA*LVVQQD Trigger: GTCTTGCTGGACCACCAGGCATGCCAGGTCCACGGG...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTTCCAGGCATGCCAGCTaGGCCTTTGATACCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFSRHAS*AFDTWR Trigger: CCTCCAGGTATCAAAGGCCCAGCTGGCATGCCTGGA...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTGGGTCCTGGGGGCCCTaGATTACCATTATTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFGSWGP*ITIIAR Trigger: CCTGGCAATAATGGTAATCCAGGGCCCCCAGGACCC...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTAGCACCACTGGGTCCTaGGGGCCCTGGATTACCATT | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFSTTGS*GPWITI Trigger: AATGGTAATCCAGGGCCCCCAGGACCCAGTGGTGCT...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAACCCTGAGCACCAGGTaGCCCCTTCTCTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRTLSTR*PLLSRL Trigger: CAGCCTGGAGAGAAGGGGCCACCTGGTGCTCAGGGT...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTAGCTACCCCGTGGACCTaGCATGCCTGGTGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLATPWT*HAWWSS Trigger: GCTGGACCACCAGGCATGCCAGGTCCACGGGGTAGC...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR TCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACACCCATGACACCAGGCTaGCCTCTGGGACCAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTPMTPG*PLGPDG Trigger: CCCATCTGGTCCCAGAGGTCAGCCTGGTGTCATGGG...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR TCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTACCTGGCTGACCATCTaGTCCAGGGTTTCCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFTWLTI*SRVSIP Trigger: AGGGATGGAAACCCTGGATCAGATGGTCAGCCAGGT...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR TCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCCAATTGCACCCTGGTaGCCAGCAGCACCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVPIAPW*PAAPGE Trigger: TTCTCCTGGTGCTGCTGGTCACCAGGGTGCAATTGG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCAGGGGCTCCAGGAATaGCAGCTGGACCCATTTCAC | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVQGLQE*QLDPFH Trigger: GTGAAATGGGTCCAGCTGGCATTCCTGGAGCCCCTG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTCCTTTTCTCCTGGGATaGCATTTGGCCCTGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFPFLLG*HLALQV Trigger: GACCTGCAGGGCCAAATGGCATCCCAGGAGAAAAGG...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTATACTCCTCTGGGTCCTaGAGGACCTGGGCCACCACG | + |
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Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLYSSGS*RTWATT Trigger: CGTGGTGGCCCAGGTCCTGCAGGACCCAGAGGAGTA...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTAGACCCGGATCTCCCTTaGGGCCTTGAGGTCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLDPDLP*GLEVHG Trigger: GCCATGGACCTCAAGGCCCCAAGGGAGATCCGGGTC...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTCTCCTGCGGCTCCTaGAAGCCCATTTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVFSCGS*KPICTR Trigger: CCTGGTGCAAATGGGCTTCCAGGAGCCGCAGGAGAA...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGATGACCAGGAGCGCCTaGGGCACCAGGAGAACCATT | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVMTRSA*GTRRTI Trigger: AATGGTTCTCCTGGTGCCCCAGGCGCTCCTGGTCAT...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAAGCTCCAGCAGGGCCTaGAGCACCAGAAGGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTSSSRA*STRRTS Trigger: GCTGGTCCTTCTGGTGCTCCAGGCCCTGCTGGAGCT...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGGGGACCTGCAGGTCCTaGACTACCAATTGCACCCTG | + |
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Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVGTCRS*TTNCTL Trigger: CAGGGTGCAATTGGTAGTCCAGGACCTGCAGGTCCC...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTAATTGCCTCGAGCACCTaGAGCTCCAGGAAGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLIASST*SSRKAW Trigger: CCAGGCCTTCCTGGAGCTGCAGGTGCTCGAGGCAAT...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTAGGATCCAGGGAATCCTaGAGTTCCAGGAGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLGSRES*SSRRAR Trigger: CCTGGCCCTCCTGGAACTGCAGGATTCCCTGGATCC...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACACCTTTCCACCAGGACTaGCGTTATTCCCGGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTPFHQD*RYSREG Trigger: GCCCTCCCGGGAATAACGGCAGTCCTGGTGGAAAGG...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTCCCGTTCTCCATTCTTaGCAGGGGCACCATCATTTC | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFPVLHS*QGHHHF Trigger: GAAATGATGGTGCCCCTGGCAAGAATGGAGAACGGG...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTAGCACCTGCACCACCTaGTTCACCCTTTTCACCCTT | + |
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Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFSTCTT*FTLFTL Trigger: AAGGGTGAAAAGGGTGAACCAGGTGGTGCAGGTGCT...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGCCAGCAGGACCCCTTaGCCCATCCTTTCCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTASRTP*PILSWN Trigger: GTTCCAGGAAAGGATGGGCCAAGGGGTCCTGCTGGC...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAACCTTTGTCACCTCGTaGACCTTGGGGACCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTTFVTS*TLGTRS Trigger: GCTCCGGGTCCCCAAGGTCCACGAGGTGACAAAGGT...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTCCAACTGGTCCTCTaGGACCTGCAGGTCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTVQLVL*DLQVLD Trigger: GTCCAGGACCTGCAGGTCCCAGAGGACCAGTTGGAC...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGACTCCAACTCCAGCAATaGCAGCAGCACCACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRLQLQQ*QQHHHH Trigger: GTGGTGGTGGTGCTGCTGCCATTGCTGGAGTTGGAG...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGACCATCTCGACCTGGCTaGCCATCTGATCCAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRPSRPG*PSDPGF Trigger: AAACCCTGGATCAGATGGTCAGCCAGGTCGAGATGG...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGATCCCCTGGCATCCCTTaGAGACCAGGAGAACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRSPGIP*RPGEPE Trigger: TTCTGGTTCTCCTGGTCTGCAAGGGATGCCAGGGGA...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGATCACCAGGGGGACCTTaGTATCCAGGAGAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRSPGGP*YPGEPG Trigger: TCCTGGTTCTCCTGGATACCAAGGTCCCCCTGGTGA...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTTGGTCCAATAGGACCTaGATGCCCACTTGTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFWSNRT*MPTCSI Trigger: GATGGAACAAGTGGGCATCCAGGTCCTATTGGACCA...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTATCGTCCAGGTCTTCCTaGCTCTCCATCCTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLSSRSS*LSILSS Trigger: GCTGGAAAGGATGGAGAGTCAGGAAGACCTGGACGA...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACACGACCACTTTCTCCTTaGCTTCCAGGAGGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTRPLSP*LPGGPG Trigger: ACCAGGACCTCCTGGAAGTCAAGGAGAAAGTGGTCG...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGCCCTTATCTCCAGGCTaGCCAGCTGGGCCAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVPLSPG*PAGPGG Trigger: TCCCCCTGGCCCAGCTGGTCAGCCTGGAGATAAGGG...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGACTGCCAGTGGGTCCTaGAGGTCCTGGAGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWTASGS*RSWRAS Trigger: GGAGGCCCTCCAGGACCTGCAGGACCCACTGGCAGT...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTCTGGATTACCATTATTaGCAGGAGGACCAGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFLDYHY*QEDQED Trigger: GTCTTCCTGGTCCTCCTGGCAATAATGGTAATCCAG...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAAGGACCCTTTTCTCCTaGGATGCCATTTGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTRTLFS*DAIWPC Trigger: GCAGGGCCAAATGGCATCCCAGGAGAAAAGGGTCCT...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGACCGACTTCACCCTTTaGACCTGGTTCACCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVTDFTL*TWFTWF Trigger: AAACCAGGTGAACCAGGTCCAAAGGGTGAAGTCGGT...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGTCCAGGGCTACCCCGTaGACCTGGCATGCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVSRATP*TWHAWW Trigger: CCACCAGGCATGCCAGGTCCACGGGGTAGCCCTGGA...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCCCCATTATGGCCACTaGCTCCTGGTTTTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVPHYGH*LLVFHF Trigger: AAAGTGGAAAACCAGGAGCCAGTGGCCATAATGGGG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAACCACTCTTTCCAGATaGACCAACAGGGCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTTTLSR*TNRARW Trigger: CCACCTGGCCCTGTTGGTCCATCTGGAAAGAGTGGT...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGCCTGGCTGTCCAGGGTaGCCTGGCGAGCCCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWPGCPG*PGEPSD Trigger: ATCTGAGGGCTCGCCAGGCCACCCTGGACAGCCAGG...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGATGGGATGAAGAAGGGTaGGAAGAAACCAGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRWDEEG*EETRFH Trigger: GTGGAACCTGGTTTCTTCTCACCCTTCTTCATCCCA...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTAGCCACCAGTTGGACATaGTTCACAGATTCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLATSWT*FTDSRG Trigger: TCCCCTGGAATCTGTGAATCATGTCCAACTGGTGGC...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGACAACATTCTCCAAATaGGATCTCTGGGTTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVTTFSK*DLWVGA Trigger: TGCCCCAACCCAGAGATCCCATTTGGAGAATGTTGT...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGAGCTCCGTTGTCTCCTaGAAGACCATTTTCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVSSVVS*KTIFTL Trigger: AAGGGTGAAAATGGTCTTCCAGGAGACAACGGAGCT...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACATCCAGGAATGCCAGCTaGACCCATTTCACCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTSRNAS*THFTLS Trigger: GGAAAGGGTGAAATGGGTCCAGCTGGCATTCCTGGA...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTCTCCTTTAGCACCTaGTTCACCATTCTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVFSFST*FTILSR Trigger: CCTGGACAGAATGGTGAACCAGGTGCTAAAGGAGAA...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACACCACGTTCCCCATTATaGCCACTGGCTCCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTPRSPL*PLAPGF Trigger: AAAACCAGGAGCCAGTGGCCATAATGGGGAACGTGG...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGTGCCAGCTGGGCCTTTaGTACCTGGAGGTCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVCQLGL*YLEVQA Trigger: TGCCTGGACCTCCAGGTATCAAAGGCCCAGCTGGCA...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR TCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAACCAGGTTCTCCAGGTaGTCCATCTTTGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTTRFSR*SIFAIF Trigger: GAAGATGGCAAAGATGGATCACCTGGAGAACCTGGT...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTACAGGAGGGCCATAGCTaGACTGAAAACCACCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLQEGHS*TENHHS Trigger: TGAATGGTGGTTTTCAGTTCAGCTATGGCCCTCCTG...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTTGTTTCCTTCAGCCTTaGATTCGCCTTCATTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFCFLQP*IRLHLI Trigger: GATCAAATGAAGGCGAATTCAAGGCTGAAGGAAACA...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTACGTTGGACTGCTGTaGCAAAATAAGAGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVYVGLL*QNKSGM Trigger: CATCCCACTCTTATTTTGGCACAGCAGTCCAACGTA...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR GCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGAGGCTGTGGGCATATTaGACAACATTCTCCAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVRLWAY*TTFSKW Trigger: CCATTTGGAGAATGTTGTGCAATATGCCCACAGCCT...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGACTCCCTTTTCTCCATTaGGTCCATCAAAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRLPFLH*VHQSLC Trigger: ACAGAGGCTTTGATGGACGCAATGGAGAAAAGGGAG...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGCAGCAGGTCCAGAACTaGCAGTGGGTCCTGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVQQVQN*QWVLQV Trigger: GACCTGCAGGACCCACTGGCAGTTCTGGACCTGCTG...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGAGAACCACTGTTGCCTaGAGGACCTGGAGGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWRTTVA*RTWRAV Trigger: GACGGCCCTCCAGGTCCTGCAGGCAACAGTGGTTCT...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCCAATAGGACCTGGATaGCCACTTGTTCCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EYDRCSADGLEFKECNTVPIGPG*PLVPSF Trigger: AAAAGATGGAACAAGTGGGCATCCAGGTCCTATTGG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGACTGAGGAATGCCAGCTaGACATCAACGACATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRLRNAS*TSTTSS Trigger: TGAAGATGTCGTTGATGTGCAGCTGGCATTCCTCAG...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGGGTCCTGCAGGTCCTaGAGGGCCTCCTTCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWGSCRS*RASFTF Trigger: AAAGGTGAAGGAGGCCCTCCAGGACCTGCAGGACCC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGTCCAGAACTGCCAGTaGGTCCTGCAGGTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWVQNCQ*VLQVLE Trigger: CTCCAGGACCTGCAGGACCCACTGGCAGTTCTGGAC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGATCCAGCATCACCTTTTaGTCCAGCTATTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRSSITF*SSYSRV Trigger: AACCCTGGAATAGCTGGACCAAAAGGTGATGCTGGA...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTATCCACACCAAATTCTTaGTCAGGACCCCCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLSTPNS*SGPPMS Trigger: TGACATTGGGGGTCCTGATCAAGAATTTGGTGTGGA...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGATGCCATTTGGCCCTaGAGGTCCTCGGAAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWDAIWP*RSSEAT Trigger: AGTGGCTTCCGAGGACCTGCAGGGCCAAATGGCATC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGCACCAGAATCACCCTTaGCTCCAGGAGCTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWHQNHP*LQELQE Trigger: CTCCTGGAGCTCCTGGAGGCAAGGGTGATTCTGGTG...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGGTGTAGAAGGCTGTaGGCATATTGCACAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRRCRRL*AYCTTF Trigger: GAATGTTGTGCAATATGCCCACAGCCTTCTACACCT...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGTCCTGGGATGCCATTTaGCCCTGCAGGTCCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVSWDAI*PCRSSE Trigger: TTCCGAGGACCTGCAGGGCCAAATGGCATCCCAGGA...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACATTCACCCTTTGGACCTaGTTCACCTGGTTTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTFTLWT*FTWFPI Trigger: AATGGGAAACCAGGTGAACCAGGTCCAAAGGGTGAA...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGAGCACCAGGAGAACCTaGAGGACCTGGATTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVSTRRT*RTWIAR Trigger: CCTGGCAATCCAGGTCCTCCAGGTTCTCCTGGTGCT...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTACTCTTGAGTTCGGGGTaGCAGAATTTTAGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLLLSSG*QNFRSL Trigger: CAGAGACCTAAAATTCTGCCACCCCGAACTCAAGAG...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGAACTCCGTCAGCACCTaGACCACCTGGTTCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWNSVST*TTWFTL Trigger: AAGGGTGAACCAGGTGGTGCAGGTGCTGACGGAGTT...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGCACCACGATCACCCTTaGCACCAGGAGATCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWHHDHP*HQEIHL Trigger: GAGATGGATCTCCTGGTGGCAAGGGTGATCGTGGTG...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGTTCGCCCTTAGGTCCTaGAATTCCTGGGGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVFALRS*NSWGTS Trigger: GCTGGTTCCCCAGGAATTCCAGGACCTAAGGGCGAA...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGACCCTTTTCACCCTTTaGGCCAGGACTTCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWTLFTL*ARTSRT Trigger: GGTCCTGGAAGTCCTGGCCCAAAGGGTGAAAAGGGT...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGAGGTCCAGCTATACCTaGAAGTCCAGGGGAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWRSSYT*KSRGTT Trigger: GGTGGTTCCCCTGGACTTCCAGGTATAGCTGGACCT...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGAGAACCTGGAGGACCTaGATTGCCAGGGAATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWRTWRT*IARESS Trigger: CGAGGATTCCCTGGCAATCCAGGTCCTCCAGGTTCT...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTATCCATCTTGCAGCCTTaGTTAGGATCAACCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLSILQP*LGSTQY Trigger: ATACTGGGTTGATCCTAACCAAGGCTGCAAGATGGA...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGATCTTTACATTGCCACTaGCCTGATCCATATAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRSLHCH*PDPYRQ Trigger: TTGCCTATATGGATCAGGCCAGTGGCAATGTAAAGA...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGCAGCTATTCCAGGGTTaGCAGGAGAACCACTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWQLFQG*QENHCC Trigger: GCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTG...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGAGACTTCTTTACATTaGCACTGGCCTGATCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTETSLH*HWPDPY Trigger: ATATGGATCAGGCCAGTGGCAATGTAAAGAAGTCTC...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGATATTTGACATGGTTCTaGCTTCCAGACATCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCVFKALPDTCKFTSNSRYLTWF*LPDISR Trigger: TCTAGAGATGTCTGGAAGCCAGAACCATGTCAAATA...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGTTTTCCATCATTGCCTaGTCCACCTGGACTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVFSIIA*STWTSG Trigger: CCCGGAAGTCCAGGTGGACCAGGCAATGATGGAAAA...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGTTTCCCATTTTCTCCTaGAGGACCACCGGTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVFPIFS*RTTGTR Trigger: CCTGGTACCGGTGGTCCTCCAGGAGAAAATGGGAAA...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGTCCTCTAGGACCTGGTaGTCCAATAGGACCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVSSRTW*SNRTWM Trigger: CATCCAGGTCCTATTGGACCACCAGGTCCTAGAGGA...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTAAGACTTGACATCATATaGGTCGAATTGGGGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLRLDII*VELGRI Trigger: TATTCTCCCCAATTCGACTCATATGATGTCAAGTCT...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTACTAGAACTGTGTAAGTaGATTTGCTGTTTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YDRCSADGLEFKECNTVLLELCK*ICCFLQ Trigger: CTGAAGGAAACAGCAAATTCACTTACACAGTTCTAG...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGGAATCTGTCCACCAGTaGTTACGTGGGACAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVESVHQ*LRGTVM Trigger: CATGACTGTCCCACGTAAGCACTGGTGGACAGATTC...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGACTTCCAGGAGGTCCTaGTTTTCCATCATTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVTSRRS*FSIIAW Trigger: CCAGGCAATGATGGAAAACCAGGACCTCCTGGAAGT...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGATGGCCACTGGCTCCTaGTTTTCCACTTTCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWMATGS*FSTFTL Trigger: AAGGGTGAAAGTGGAAAACCAGGAGCCAGTGGCCAT...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGGGACAGTCATGGGGCTaGCATTTATGCATGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVGQSWG*HLCMFP Trigger: GGGAAACATGCATAAATGCCAGCCCCATGACTGTCC...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGTGGGGCTGGCATTTATaGATGTTTCCCCAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWWGWHL*MFPQFP Trigger: TGGAAACTGGGGAAACATGCATAAATGCCAGCCCCA...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGAAGAAGTCTGAGGAATaGCAGCTGCACATCAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWKKSEE*QLHIND Trigger: GTCGTTGATGTGCAGCTGGCATTCCTCAGACTTCTT...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTAGTCTCATTGCCTTaGGTGTTTGATATTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NEYDRCSADGLEFKECNTVVSLP*VFDIQR Trigger: TCTTTGAATATCAAACACGCAAGGCAATGAGACTAC...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGAGAATTTTAGGTCTCTaGAGTTCCGAGCAGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVRILGL*SSEQGF Trigger: AAAACCCTGCTCGGAACTGCAGAGACCTAAAATTCT...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR GCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGATTCAAAGACTGTCTTaGTCCATTCCCCAGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWIQRLS*SIPQCV Trigger: AACACACTGGGGAATGGAGCAAGACAGTCTTTGAAT...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGATTGCCTTGCGTGTTTaGTATTCAAAGACTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRREAPLKAFIPMMKTIVIALRV*YSKTVL Trigger: CAAGACAGTCTTTGAATATCAAACACGCAAGGCAAT...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CCA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGATCTTGAAATCCATTaGATCGTCTCCATAATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HASQYFWQKTNIDTLHLWDLEIH*IVSIIG Trigger: CCCTATTATGGAGACGATCCAATGGATTTCAAGATC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 90 bp | AGCTATTCCAGGGTTGCCAGGAGAACCACTGTTGCCTGCAGGACCTaGAGGGCCGTCCTTGCCAGGAGCACCACTGGGTCCTGGGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SYSRVARRTTVACRT*RAVLARSTTGSWGP Trigger: GGGCCCCCAGGACCCAGTGGTGCTCCTGGCAAGGACGGCCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS GCA 90 bp | AGCAGGACCCCTTGGCCCATCCTTTCCTGGAACTCCGTCAGCACCTaGACCACCTGGTTCACCCTTTCCTCCCTCAGGGCCAGGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRTPWPILSWNSVST*TTWFTLSSLRARGS Trigger: GGACCCCCTGGCCCTGAGGGAGGAAAGGGTGAACCAGGTGGTGCAGGTGCTGACGGAGTTCCAGGAAAGGATGGGCCAAGGGGTCCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185687.2 |
||
| CDS TCA 90 bp | GTTAGCCCTGCAATTCCAAGTGGGCCTGGGGAACCCGGAGGACCCTaGGCACCAGGTGGCCCCTTCTCTCCAGGCTGTCCAGCATCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VSPAIPSGPGEPGGP*APGGPFSPGCPASP Trigger: AGGTGATGCTGGACAGCCTGGAGAGAAGGGGCCACCTGGTGCTCAGGGTCCTCCGGGTTCCCCAGGCCCACTTGGAATTGCAGGGCTAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS GCA 90 bp | ACGCTCTCCGGGAGGACCCTTTTCTCCTGGGATGCCATTTGGCCCTaGAGGTCCTCGGAAGCCACTAGGACCCCTTTCTCCTGCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSGRTLFSWDAIWP*RSSEATRTPFSCGS Trigger: GGAGCCGCAGGAGAAAGGGGTCCTAGTGGCTTCCGAGGACCTGCAGGGCCAAATGGCATCCCAGGAGAAAAGGGTCCTCCCGGAGAGCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 90 bp | GCCACCACGCTCTCCGGGAGGACCCTTTTCTCCTGGGATGCCATTTaGCCCTGCAGGTCCTCGGAAGCCACTAGGACCCCTTTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ATTLSGRTLFSWDAI*PCRSSEATRTPFSC Trigger: GCAGGAGAAAGGGGTCCTAGTGGCTTCCGAGGACCTGCAGGGCCAAATGGCATCCCAGGAGAAAAGGGTCCTCCCGGAGAGCGTGGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 90 bp | AGGCGGACCAGCAGGTCCAGAACTGCCAGTGGGTCCTGCAGGTCCTaGAGGGCCTCCTTCACCTTTCTCTCCAGGGGCACCTCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRTSRSRTASGSCRS*RASFTFLSRGTSFS Trigger: GGAGAAAGAGGTGCCCCTGGAGAGAAAGGTGAAGGAGGCCCTCCAGGACCTGCAGGACCCACTGGCAGTTCTGGACCTGCTGGTCCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000185687.2 |
||
| CDS GCA 90 bp | CTCCAGGAATGCCAGCTGGACCCATTTCACCCTTTCCACCAGGACTaGCGTTATTCCCGGGAGGGCCAGGAGGCCCTTGAGCACCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LQECQLDPFHPFHQD*RYSREGQEALEHQH Trigger: ATGCTGGTGCTCAAGGGCCTCCTGGCCCTCCCGGGAATAACGGCAGTCCTGGTGGAAAGGGTGAAATGGGTCCAGCTGGCATTCCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS GCA 90 bp | TTTTGGTCCAGCTATTCCAGGGTTGCCAGGAGAACCACTGTTGCCTaGAGGACCTGGAGGGCCGTCCTTGCCAGGAGCACCACTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FWSSYSRVARRTTVA*RTWRAVLARSTTGS Trigger: GGACCCAGTGGTGCTCCTGGCAAGGACGGCCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTGGACCAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS GCA 90 bp | CACCTTTTGGTCCAGCTATTCCAGGGTTGCCAGGAGAACCACTGTTaGCTGCAGGACCTGGAGGGCCGTCCTTGCCAGGAGCACCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLLVQLFQGCQENHC*LQDLEGRPCQEHHW Trigger: CCAGTGGTGCTCCTGGCAAGGACGGCCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTGGACCAAAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS GCA 90 bp | CTCCAGGCTGTCCAGCATCACCTTTTGGTCCAGCTATTCCAGGGTTaGCAGGAGAACCACTGTTGCCTGCAGGACCTGGAGGGCCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQAVQHHLLVQLFQG*QENHCCLQDLEGRP Trigger: AGGACGGCCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTGGACCAAAAGGTGATGCTGGACAGCCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 90 bp | CCTTGGCCCATCCTTTCCTGGAACTCCGTCAGCACCTGCACCACCTaGTTCACCCTTTTCACCCTTTGGGCCAGGACTTCCAGGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PWPILSWNSVSTCTT*FTLFTLWARTSRTS Trigger: GGAGGTCCTGGAAGTCCTGGCCCAAAGGGTGAAAAGGGTGAACCAGGTGGTGCAGGTGCTGACGGAGTTCCAGGAAAGGATGGGCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 90 bp | AGGAGGTCCATGTGGTCCAACTGGTCCTCTGGGACCTGCAGGTCCTaGACTACCAATTGCACCCTGGTGACCAGCAGCACCAGGAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: RRSMWSNWSSGTCRS*TTNCTLVTSSTRRT Trigger: GGTTCTCCTGGTGCTGCTGGTCACCAGGGTGCAATTGGTAGTCCAGGACCTGCAGGTCCCAGAGGACCAGTTGGACCACATGGACCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS TCA 90 bp | TCACCACGATCACCCTTGCCACCAGGAGATCCATCTCGACCTGGCTaGCCATCTGATCCAGGGTTTCCATCCCTTCCAGGTTCACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPRSPLPPGDPSRPG*PSDPGFPSLPGSPA Trigger: AGCTGGTGAACCTGGAAGGGATGGAAACCCTGGATCAGATGGTCAGCCAGGTCGAGATGGATCTCCTGGTGGCAAGGGTGATCGTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTGCCTGCCGGACCAGCTaGACCAGGTTCACCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFACRTS*TRFTRG Trigger: CCCCCTGGTGAACCTGGTCAAGCTGGTCCGGCAGGC...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS TCA 90 bp | TTCTCCTGCGGCTCCTGGAAGCCCATTTGCACCAGGTTCTCCAGGTaGTCCATCTTTGCCATCTTCGCCCTTAGGTCCTGGAATTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSCGSWKPICTRFSR*SIFAIFALRSWNSW Trigger: CCAGGAATTCCAGGACCTAAGGGCGAAGATGGCAAAGATGGATCACCTGGAGAACCTGGTGCAAATGGGCTTCCAGGAGCCGCAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS GCA 90 bp | GTATGTAATGTTCTGGGAGGCCCGGCTGGAAAGAAGTCTGAGGAATaGCAGCTGCACATCAACGACATCTTCAGGAAGATCAGGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCNVLGGPAGKKSEE*QLHINDIFRKIRRA Trigger: GGCCCTCCTGATCTTCCTGAAGATGTCGTTGATGTGCAGCTGGCATTCCTCAGACTTCTTTCCAGCCGGGCCTCCCAGAACATTACATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
||
| CDS CCA 90 bp | AGGTCCATGGCCATCAGGAAGCACAGGAGCAGGTGTAGAAGGCTGTaGGCATATTGCACAACATTCTCCAAATGGGATCTCTGGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSMAIRKHRSRCRRL*AYCTTFSKWDLWVG Trigger: CCCAACCCAGAGATCCCATTTGGAGAATGTTGTGCAATATGCCCACAGCCTTCTACACCTGCTCCTGTGCTTCCTGATGGCCATGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGACCCAGGGAGACCTGGTaGTCCTGGAAGGCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TCVFKALPDTCKFTSNSRPRETW*SWKARV Trigger: GACCCTGGCCTTCCAGGACAACCAGGTCTCCCTGGG...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCCAGGAGAACCACTGTaGCCTGCAGGACCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EYDRCSADGLEFKECNTVPGEPL*PAGPGG Trigger: CCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS TCA 90 bp | GACCAGCTGGTCCCGGATAGCCACCCATTCCTCCCACTCCAGACTTaGCATCATATGAGTCGAATTGGGGAGAATAATTTTGGCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: DQLVPDSHPFLPLQT*HHMSRIGENNFGHQ Trigger: CTGGTGGCCAAAATTATTCTCCCCAATTCGACTCATATGATGTCAAGTCTGGAGTGGGAGGAATGGGTGGCTATCCGGGACCAGCTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGATGCCAGCTGGGCCTTaGATACCTGGAGGTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EYDRCSADGLEFKECNTVMPAGP*IPGGPG Trigger: GCCTGGACCTCCAGGTATCAAAGGCCCAGCTGGCAT...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACACCCCGAGCACCATCATaGCCTCGAGCACCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NEYDRCSADGLEFKECNTPRAPS*PRAPAA Trigger: AGCTGCAGGTGCTCGAGGCAATGATGGTGCTCGGGG...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCACCCTTTTCACCCTTaGGGCCAGGACTTCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EYDRCSADGLEFKECNTVHPFHP*GQDFQD Trigger: GTCCTGGAAGTCCTGGCCCAAAGGGTGAAAAGGGTG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTAATCTCCCTTGGGGCCTaGAGGTCCATGGCCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YDRCSADGLEFKECNTVLISLGA*RSMAIR Trigger: CCTGATGGCCATGGACCTCAAGGCCCCAAGGGAGAT...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGCCAGGGGGACCAGGTaGCCCATCACTGCCCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWARGTR*PITAPS Trigger: GCTCGGGGCAGTGATGGGCAACCTGGTCCCCCTGGC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS GCA 90 bp | CCAAACCAAACATGTTTCTTCTCTGCACCAGAATCTGTCCACCAGTaGTTACGTGGGACAGTCATGGGGCTGGCATTTATGCATGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PNQTCFFSAPESVHQ*LRGTVMGLAFMHVS Trigger: GGAAACATGCATAAATGCCAGCCCCATGACTGTCCCACGTAAGCACTGGTGGACAGATTCTGGTGCAGAGAAGAAACATGTTTGGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
||
| CDS CCA 90 bp | AACATGTTTCTTCTCTGCACCAGAATCTGTCCACCAGTGCTTACGTaGGACAGTCATGGGGCTGGCATTTATGCATGTTTCCCCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NMFLLCTRICPPVLT*DSHGAGIYACFPSF Trigger: GAAACTGGGGAAACATGCATAAATGCCAGCCCCATGACTGTCCCACGTAAGCACTGGTGGACAGATTCTGGTGCAGAGAAGAAACATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAAATGGGATCTCTGGGTaGGGGCAGTCTAGTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NEYDRCSADGLEFKECNTNGISG*GQSSGS Trigger: GGAGCCACTAGACTGCCCCAACCCAGAGATCCCATT...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCCAGGTGATCCATCTTaGCCATCTTCGCCCTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EYDRCSADGLEFKECNTVPGDPS*PSSPLG Trigger: ACCTAAGGGCGAAGATGGCAAAGATGGATCACCTGG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTACTCCTGGAAGCCCATTaGCACCAGGTTCTCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YDRCSADGLEFKECNTVLLLEAH*HQVLQV Trigger: CACCTGGAGAACCTGGTGCAAATGGGCTTCCAGGAG...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCCTGGTTTTCCATCATaGCCTGGTCCACCTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: EYDRCSADGLEFKECNTVPGFPS*PGPPGL Trigger: AAGTCCAGGTGGACCAGGCAATGATGGAAAACCAGG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGCCTGGAGGGCCGTCCTaGCCAGGAGCACCACTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWPGGPS*PGAPLG Trigger: ACCCAGTGGTGCTCCTGGCAAGGACGGCCCTCCAGG...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGGACCTGGATGCCCACTaGTTCCATCTTTTCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EYDRCSADGLEFKECNTVDLDAH*FHLFQE Trigger: CTCCTGGAAAAGATGGAACAAGTGGGCATCCAGGTC...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTCCTCCCACTCCAGACTaGACATCATATGAGTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFPPTPD*TSYESN Trigger: ATTCGACTCATATGATGTCAAGTCTGGAGTGGGAGG...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTACCCCGTTCTCCATTCTaGCCAGGGGCACCATCATTT | + |
|
Preference number: 5 (lower is better) Translates to: YDRCSADGLEFKECNTVLPRSPF*PGAPSF Trigger: AAATGATGGTGCCCCTGGCAAGAATGGAGAACGGGG...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | TATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGTTACCAGCTATTCCAGGGTaGCCAGGAGAACCACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YDRCSADGLEFKECNTVLPAIPG*PGEPLL Trigger: CAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTGG...TAACACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | AATGAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACATCACCACGATCACCCTaGCCACCAGGAGATCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: NEYDRCSADGLEFKECNTSPRSP*PPGDPS Trigger: AGATGGATCTCCTGGTGGCAAGGGTGATCGTGGTGA...TGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGATCACCAGTTTCACCTTaGTCACCTCGTGGACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TCVFKALPDTCKFTSNSRSPVSP*SPRGPW Trigger: CCAAGGTCCACGAGGTGACAAAGGTGAAACTGGTGA...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | AGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAGAGAAGCACCTTTGTCACAGACACATATTaGACATGGTTCTGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSRYLQVHQQQQKRSTFVTDTY*TWFWLP Trigger: TGGAAGCCAGAACCATGTCAAATATGTGTCTGTGAC...AAAGGTGCTTCTCTTCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGGCCAGCAGGACCCCTaGGCCCATCCTTTCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWGQQDP*AHPFLE Trigger: TTCCAGGAAAGGATGGGCCAAGGGGTCCTGCTGGCC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS TCA 90 bp | TTCAGTGTTGATCTTGAAATCCATTGGATCGTCTCCATAATAGGGTaGAAAGCCACCAGACTTTTCACCTCCAACTCCAGCAATGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSVDLEIHWIVSIIG*KATRLFTSNSSNGS Trigger: GCTGCCATTGCTGGAGTTGGAGGTGAAAAGTCTGGTGGCTTTTCACCCTATTATGGAGACGATCCAATGGATTTCAAGATCAACACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
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| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGCACCAGAATCACCCTaGCCTCCAGGAGCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWAPESP*PPGAPG Trigger: TCCTGGAGCTCCTGGAGGCAAGGGTGATTCTGGTGC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CAA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAATCCATCTTGCAGCCTaGGTTAGGATCAACCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TCVFKALPDTCKFTSNSRIHLAA*VRINPV Trigger: TACTGGGTTGATCCTAACCAAGGCTGCAAGATGGAT...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS TCA 90 bp | GTAAGTGAATTTGCTGTTTCCTTCAGCCTTGAATTCGCCTTCATTTaGTCCCATCAGCTTCAGAGACTTCTTTACATTGCCACTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSEFAVSFSLEFAFI*SHQLQRLLYIATGL Trigger: CAGGCCAGTGGCAATGTAAAGAAGTCTCTGAAGCTGATGGGATCAAATGAAGGCGAATTCAAGGCTGAAGGAAACAGCAAATTCACTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CAA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAAGGCTGTGGGCATATaGCACAACATTCTCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TCVFKALPDTCKFTSNSRKAVGI*HNILQM Trigger: CATTTGGAGAATGTTGTGCAATATGCCCACAGCCTT...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGTTCACCAGGGGGACCTaGGTATCCAGGAGAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWFTRGT*VSRRTR Trigger: CCTGGTTCTCCTGGATACCAAGGTCCCCCTGGTGAA...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CAA 90 bp | AGCAGAAGAGAAGCACCTTTAAAAGCATTTATACCTATGATGAAGACAATTGTGGGGCCAGGAGCTCCGTaGTCTCCTGGAAGACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SRREAPLKAFIPMMKTIVGPGAP*SPGRPF Trigger: AAATGGTCTTCCAGGAGACAACGGAGCTCCTGGCCC...CACAATTGTCTTCATCATAGGTATAAATGCTTTTAAAGGTGCTTCTCTTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGCGACCACTTTCTCCTaGACTTCCAGGAGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWATTFS*TSRRSW Trigger: CCAGGACCTCCTGGAAGTCAAGGAGAAAGTGGTCGC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGGTCCAGAATCTCCCTaGTCACCAGCTGGGCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWGPESP*SPAGPV Trigger: TACTGGCCCAGCTGGTGACAAGGGAGATTCTGGACC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS TCA 90 bp | CAAATTCTTGATCAGGACCCCCAATGTCATAGGGTGCGATATCTATaGTGGGTAGTCTCATTGCCTTGCGTGTTTGATATTCAAAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QILDQDPQCHRVRYL*WVVSLPCVFDIQRL Trigger: CAGTCTTTGAATATCAAACACGCAAGGCAATGAGACTACCCATCATAGATATCGCACCCTATGACATTGGGGGTCCTGATCAAGAATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | ACATGTGTCTTTAAAGCCCTTCCAGATACTTGCAAGTTCACCAGCAACAGCAGAAATTTTGGCCACCAGTaGGACATGATTCACAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: TCVFKALPDTCKFTSNSRNFGHQ*DMIHRF Trigger: GAATCTGTGAATCATGTCCAACTGGTGGCCAAAATT...TCTGCTGTTGCTGGTGAACTTGCAAGTATCTGGAAGGGCTTTAAAGACACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | GAGTATGACCGTTGCTCTGCAGATGGGCTAGAGTTCAAAGAATGTAACACAGTGCATTGCCTTGCGTGTTaGATATTCAAAGACTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EYDRCSADGLEFKECNTVHCLAC*IFKDCL Trigger: AAGACAGTCTTTGAATATCAAACACGCAAGGCAATG...CACTGTGTTACATTCTTTGAACTCTAGCCCATCTGCAGAGCAACGGTCATACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGTCCAGCATCACCTTTaGGTCCAGCTATTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWVQHHL*VQLFQG Trigger: ACCCTGGAATAGCTGGACCAAAAGGTGATGCTGGAC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGTCTCCCTTTTCTCCATaGCGTCCATCAAAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWSPFSP*RPSKPL Trigger: CAGAGGCTTTGATGGACGCAATGGAGAAAAGGGAGA...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGGTCCACACCAAATTCTaGATCAGGACCCCCAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWVHTKF*IRTPNV Trigger: GACATTGGGGGTCCTGATCAAGAATTTGGTGTGGAC...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGTATTCAAAGACTGTCTaGCTCCATTCCCCAGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWYSKTV*LHSPVC Trigger: ACACACTGGGGAATGGAGCAAGACAGTCTTTGAATA...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS TCA 90 bp | ATCAGGGCTTATAAGACTCTCTATTTGTCCATTAACAGACTTGAGTaGAGACATAATCTCTTCAGTGTTGATCTTGAAATCCATTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: IRAYKTLYLSINRLE*RHNLFSVDLEIHWI Trigger: GATCCAATGGATTTCAAGATCAACACTGAAGAGATTATGTCTTCACTCAAGTCTGTTAATGGACAAATAGAGAGTCTTATAAGCCCTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTCAATATTTCTGGCAGAAGACAAATATAGATACTTTGCATTTATGGTCTTCAGTGTTGATCTaGAAATCCATTGGATCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HASQYFWQKTNIDTLHLWSSVLI*KSIGSS Trigger: AGACGATCCAATGGATTTCAAGATCAACACTGAAGA...CCATAAATGCAAAGTATCTATATTTGTCTTCTGCCAGAAATATTGACTGGCATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 72 bp | GCACCAGGGGGTCCAGGGGGTCCTGGCTGTCCAGGGTaGCCTGGCGAGCCCTCAGATCCTCTTTCACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: APGGPGGPGCPG*PGEPSDPLSPL Trigger: CAGAGGTGAAAGAGGATCTGAGGGCTCGCCAGGCCACCCTGGACAGCCAGGACCCCCTGGACCCCCTGGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
||
| CDS CCA 72 bp | TGGGCCACCACGCTCTCCGGGAGGACCCTTTTCTCCTaGGATGCCATTTGGCCCTGCAGGTCCTCGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WATTLSGRTLFS*DAIWPCRSSEA Trigger: GGCTTCCGAGGACCTGCAGGGCCAAATGGCATCCCAGGAGAAAAGGGTCCTCCCGGAGAGCGTGGTGGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 72 bp | AGGGTTGCCAGGAGAACCACTGTTGCCTGCAGGACCTaGAGGGCCGTCCTTGCCAGGAGCACCACTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVARRTTVACRT*RAVLARSTTGS Trigger: GGACCCAGTGGTGCTCCTGGCAAGGACGGCCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 72 bp | AGCAGGTCCAGAACTGCCAGTGGGTCCTGCAGGTCCTaGAGGGCCTCCTTCACCTTTCTCTCCAGGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRSRTASGSCRS*RASFTFLSRGT Trigger: GGTGCCCCTGGAGAGAAAGGTGAAGGAGGCCCTCCAGGACCTGCAGGACCCACTGGCAGTTCTGGACCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000185687.2 |
||
| CDS CCA 72 bp | TGGAGGGCCGTCCTTGCCAGGAGCACCACTGGGTCCTaGGGGCCCTGGATTACCATTATTGCCAGGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: WRAVLARSTTGS*GPWITIIARRT Trigger: GGTCCTCCTGGCAATAATGGTAATCCAGGGCCCCCAGGACCCAGTGGTGCTCCTGGCAAGGACGGCCCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 72 bp | CAGGACCTGGAGGGCCGTCCTTGCCAGGAGCACCACTaGGTCCTGGGGGCCCTGGATTACCATTATTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QDLEGRPCQEHH*VLGALDYHYCQ Trigger: CTGGCAATAATGGTAATCCAGGGCCCCCAGGACCCAGTGGTGCTCCTGGCAAGGACGGCCCTCCAGGTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CCA 72 bp | CTTGATACCCTGAGGTCCAGGGCTACCCCGTGGACCTaGCATGCCTGGTGGTCCAGCAAGACCTCGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LDTLRSRATPWT*HAWWSSKTSCS Trigger: GGAGCACGAGGTCTTGCTGGACCACCAGGCATGCCAGGTCCACGGGGTAGCCCTGGACCTCAGGGTATCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
||
| CDS CAA 72 bp | GCACCACTGGGTCCTGGGGGCCCTGGATTACCATTATaGCCAGGAGGACCAGGAAGACCACGCCCACCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: APLGPGGPGLPL*PGGPGRPRPPG Trigger: TCCCGGTGGGCGTGGTCTTCCTGGTCCTCCTGGCAATAATGGTAATCCAGGGCCCCCAGGACCCAGTGGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS TCA 72 bp | GGAATGCCAGGAGGACCCGGATCTCCCTTGGGGCCTTaGGGTCCATGGCCATCAGGAAGCACAGGAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GMPGGPGSPLGP*GPWPSGSTGAG Trigger: ACCTGCTCCTGTGCTTCCTGATGGCCATGGACCTCAAGGCCCCAAGGGAGATCCGGGTCCTCCTGGCATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | GTCCTGGAAGGCCAGGGTCACCATTTCTCCCAGGAATaGCAGGAGGACCCGGATCTCCCTTGGGGCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: VLEGQGHHFSQE*QEDPDLPWGLE Trigger: CTCAAGGCCCCAAGGGAGATCCGGGTCCTCCTGGCATTCCTGGGAGAAATGGTGACCCTGGCCTTCCAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | TGCCAGCTGGACCCATTTCACCCTTTCCACCAGGACTaGCGTTATTCCCGGGAGGGCCAGGAGGCCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: CQLDPFHPFHQD*RYSREGQEALE Trigger: CTCAAGGGCCTCCTGGCCCTCCCGGGAATAACGGCAGTCCTGGTGGAAAGGGTGAAATGGGTCCAGCTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | CACCACTGGGTCCTGGGGGCCCTGGATTACCATTATTaGCAGGAGGACCAGGAAGACCACGCCCACCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HHWVLGALDYHY*QEDQEDHAHRE Trigger: TTCCCGGTGGGCGTGGTCTTCCTGGTCCTCCTGGCAATAATGGTAATCCAGGGCCCCCAGGACCCAGTGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | GTCCAGCTATTCCAGGGTTGCCAGGAGAACCACTGTTaGCTGCAGGACCTGGAGGGCCGTCCTTGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VQLFQGCQENHC*LQDLEGRPCQE Trigger: CTCCTGGCAAGGACGGCCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | TACCCTGAGGTCCAGGGCTACCCCGTGGACCTGGCATaGCTGGTGGTCCAGCAAGACCTCGTGCTCCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: YPEVQGYPVDLA*LVVQQDLVLQL Trigger: TAACTGGAGCACGAGGTCTTGCTGGACCACCAGGCATGCCAGGTCCACGGGGTAGCCCTGGACCTCAGGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | CCTTGGCCCATCCTTTCCTGGAACTCCGTCAGCACCTaGACCACCTGGTTCACCCTTTCCTCCCTCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PWPILSWNSVST*TTWFTLSSLRA Trigger: GGCCCTGAGGGAGGAAAGGGTGAACCAGGTGGTGCAGGTGCTGACGGAGTTCCAGGAAAGGATGGGCCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185687.2 |
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| CDS CCA 72 bp | CTCTCCGGGAGGACCCTTTTCTCCTGGGATGCCATTTaGCCCTGCAGGTCCTCGGAAGCCACTAGGACCCCT | + |
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Preference number: 6 (lower is better) Translates to: LSGRTLFSWDAI*PCRSSEATRTP Trigger: AGGGGTCCTAGTGGCTTCCGAGGACCTGCAGGGCCAAATGGCATCCCAGGAGAAAAGGGTCCTCCCGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS TCA 72 bp | GGACCACCAGGACTACCACGTTCACCCTTTACACCCTaGGGACCAGGCGGACCAGCAGGTCCAGAACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GPPGLPRSPFTP*GPGGPAGPELP Trigger: TGGCAGTTCTGGACCTGCTGGTCCGCCTGGTCCTCAGGGTGTAAAGGGTGAACGTGGTAGTCCTGGTGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000185687.2 |
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| CDS GCA 72 bp | GGGAGGACCCTTTTCTCCTGGGATGCCATTTGGCCCTaGAGGTCCTCGGAAGCCACTAGGACCCCTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GRTLFSWDAIWP*RSSEATRTPFS Trigger: GGAGAAAGGGGTCCTAGTGGCTTCCGAGGACCTGCAGGGCCAAATGGCATCCCAGGAGAAAAGGGTCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | TGGTCCTCTGGGACCTGCAGGTCCTGGACTACCAATTaGACCCTGGTGACCAGCAGCACCAGGAGAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: WSSGTCRSWTTN*TLVTSSTRRTW Trigger: CCAGGTTCTCCTGGTGCTGCTGGTCACCAGGGTGCAATTGGTAGTCCAGGACCTGCAGGTCCCAGAGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CCA 72 bp | AATAGGGCCAGCAGGACCCCTTGGCCCATCCTTTCCTaGAACTCCGTCAGCACCTGCACCACCTGGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: NRASRTPWPILS*NSVSTCTTWFT Trigger: GGTGAACCAGGTGGTGCAGGTGCTGACGGAGTTCCAGGAAAGGATGGGCCAAGGGGTCCTGCTGGCCCTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000185687.2 |
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| CDS CAA 72 bp | AGGCCAGGTCCTCCAGGGCCACCCCGTTCTCCATTCTaGCCAGGGGCACCATCATTTCCTTTAGGACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RPGPPGPPRSPF*PGAPSFPLGPG Trigger: CCCTGGTCCTAAAGGAAATGATGGTGCCCCTGGCAAGAATGGAGAACGGGGTGGCCCTGGAGGACCTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CAA 90 bp | TGGAGGGCCTGCCGGACCAGCTTGACCAGGTTCACCAGGGGGACCTaGGTATCCAGGAGAACCAGGAGATCCAGGATGTCCAGAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: WRACRTSLTRFTRGT*VSRRTRRSRMSRRT Trigger: GGTTCTTCTGGACATCCTGGATCTCCTGGTTCTCCTGGATACCAAGGTCCCCCTGGTGAACCTGGTCAAGCTGGTCCGGCAGGCCCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CAA 90 bp | TCACCTTTTGGTCCAGCTATTCCAGGGTTGCCAGGAGAACCACTGTaGCCTGCAGGACCTGGAGGGCCGTCCTTGCCAGGAGCACCACTG | + |
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Preference number: 6 (lower is better) Translates to: SPFGPAIPGLPGEPL*PAGPGGPSLPGAPL Trigger: CAGTGGTGCTCCTGGCAAGGACGGCCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTGGACCAAAAGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CAA 90 bp | TCTCCAGGCTGTCCAGCATCACCTTTTGGTCCAGCTATTCCAGGGTaGCCAGGAGAACCACTGTTGCCTGCAGGACCTGGAGGGCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SPGCPASPFGPAIPG*PGEPLLPAGPGGPS Trigger: GGACGGCCCTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTGGACCAAAAGGTGATGCTGGACAGCCTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CCA 72 bp | ATGTGGTCCAACTGGTCCTCTGGGACCTGCAGGTCCTaGACTACCAATTGCACCCTGGTGACCAGCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: MWSNWSSGTCRS*TTNCTLVTSST Trigger: GGTGCTGCTGGTCACCAGGGTGCAATTGGTAGTCCAGGACCTGCAGGTCCCAGAGGACCAGTTGGACCACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CAA 72 bp | TGCCGGACCAGCTTGACCAGGTTCACCAGGGGGACCTaGGTATCCAGGAGAACCAGGAGATCCAGGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: CRTSLTRFTRGT*VSRRTRRSRMS Trigger: GGACATCCTGGATCTCCTGGTTCTCCTGGATACCAAGGTCCCCCTGGTGAACCTGGTCAAGCTGGTCCGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS TCA 72 bp | TATGGCCACTGGCTCCTGGTTTTCCACTTTCACCCTTaGTACCCTGAGGTCCAGGGCTACCCCGTGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: YGHWLLVFHFHP*YPEVQGYPVDL Trigger: CAGGTCCACGGGGTAGCCCTGGACCTCAGGGTATCAAGGGTGAAAGTGGAAAACCAGGAGCCAGTGGCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS TCA 72 bp | ATAGGACCAGGACTACCACGTTCACCCTTTACACCCTaGGGACCAGGCGGACCAGCAGGTCCAGAACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: IGPGLPRSPFTP*GPGGPAGPELP Trigger: TGGCAGTTCTGGACCTGCTGGTCCGCCTGGTCCTCAGGGTGTAAAGGGTGAACGTGGTAGTCCTGGTCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186021.2 |
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| CDS CCA 72 bp | GTGTCCTTTCATACCAGGGAATCCAGGCATGCCAGCTaGGCCTTTGATACCTGGAGGTCCAGGCAGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: VSFHTRESRHAS*AFDTWRSRQST Trigger: CGTGGACTGCCTGGACCTCCAGGTATCAAAGGCCCAGCTGGCATGCCTGGATTCCCTGGTATGAAAGGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CCA 72 bp | TCTCTCACCAGGGCCACCTCGAGGTCCAGCTATACCTaGAAGTCCAGGGGAACCACCTTCACCCTTATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLTRATSRSSYT*KSRGTTFTLIS Trigger: GGAGATAAGGGTGAAGGTGGTTCCCCTGGACTTCCAGGTATAGCTGGACCTCGAGGTGGCCCTGGTGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000185687.2 |
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| CDS TCA 72 bp | GGCTCCTGGAAGCCCATTTGCACCAGGTTCTCCAGGTaGTCCATCTTTGCCATCTTCGCCCTTAGGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSWKPICTRFSR*SIFAIFALRSW Trigger: CCAGGACCTAAGGGCGAAGATGGCAAAGATGGATCACCTGGAGAACCTGGTGCAAATGGGCTTCCAGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS TCA 72 bp | TCACCCTTGCCACCAGGAGATCCATCTCGACCTGGCTaGCCATCTGATCCAGGGTTTCCATCCCTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SPLPPGDPSRPG*PSDPGFPSLPG Trigger: ACCTGGAAGGGATGGAAACCCTGGATCAGATGGTCAGCCAGGTCGAGATGGATCTCCTGGTGGCAAGGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | GTCCAGCATCACCTTTTGGTCCAGCTATTCCAGGGTTaGCAGGAGAACCACTGTTGCCTGCAGGACCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VQHHLLVQLFQG*QENHCCLQDLE Trigger: CTCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTGGACCAAAAGGTGATGCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | GAGGCCCGGCTGGAAAGAAGTCTGAGGAATGCCAGCTaGACATCAACGACATCTTCAGGAAGATCAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: EARLERSLRNAS*TSTTSSGRSGG Trigger: CCCTCCTGATCTTCCTGAAGATGTCGTTGATGTGCAGCTGGCATTCCTCAGACTTCTTTCCAGCCGGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
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| CDS CCA 72 bp | AGGAGGACCACGTTCCCCATTATGGCCACTGGCTCCTaGTTTTCCACTTTCACCCTTGATACCCTGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RRTTFPIMATGS*FSTFTLDTLRS Trigger: GGACCTCAGGGTATCAAGGGTGAAAGTGGAAAACCAGGAGCCAGTGGCCATAATGGGGAACGTGGTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CAA 72 bp | TGTCCAGCATCACCTTTTGGTCCAGCTATTCCAGGGTaGCCAGGAGAACCACTGTTGCCTGCAGGACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: CPASPFGPAIPG*PGEPLLPAGPG Trigger: TCCAGGTCCTGCAGGCAACAGTGGTTCTCCTGGCAACCCTGGAATAGCTGGACCAAAAGGTGATGCTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | GTTCTGGGAGGCCCGGCTGGAAAGAAGTCTGAGGAATaGCAGCTGCACATCAACGACATCTTCAGGAAGATC | + |
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Preference number: 6 (lower is better) Translates to: VLGGPAGKKSEE*QLHINDIFRKI Trigger: GATCTTCCTGAAGATGTCGTTGATGTGCAGCTGGCATTCCTCAGACTTCTTTCCAGCCGGGCCTCCCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
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| CDS CAA 90 bp | GGAGAACCTGGAGGACCTGGATTGCCAGGGAATCCTCGATGTCCTTaGATGCCATTAGAGCCACGTTCACCAGTTTCACCTTTGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: GEPGGPGLPGNPRCP*MPLEPRSPVSPLSP Trigger: AGGTGACAAAGGTGAAACTGGTGAACGTGGCTCTAATGGCATCAAAGGACATCGAGGATTCCCTGGCAATCCAGGTCCTCCAGGTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | AAGCACAGGAGCAGGTGTAGAAGGCTGTGGGCATATTaGACAACATTCTCCAAATGGGATCTCTGGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: KHRSRCRRLWAY*TTFSKWDLWVG Trigger: CCCAACCCAGAGATCCCATTTGGAGAATGTTGTGCAATATGCCCACAGCCTTCTACACCTGCTCCTGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CCA 72 bp | GCCATCAGGAAGCACAGGAGCAGGTGTAGAAGGCTGTaGGCATATTGCACAACATTCTCCAAATGGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: AIRKHRSRCRRL*AYCTTFSKWDL Trigger: GAGATCCCATTTGGAGAATGTTGTGCAATATGCCCACAGCCTTCTACACCTGCTCCTGTGCTTCCTGATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CCA 72 bp | CAGAATCTGTCCACCAGTGCTTACGTGGGACAGTCATaGGGCTGGCATTTATGCATGTTTCCCCAGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QNLSTSAYVGQS*GWHLCMFPQFP Trigger: TGGAAACTGGGGAAACATGCATAAATGCCAGCCCCATGACTGTCCCACGTAAGCACTGGTGGACAGATTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
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| CDS CCA 72 bp | CTTCTCTGCACCAGAATCTGTCCACCAGTGCTTACGTaGGACAGTCATGGGGCTGGCATTTATGCATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LLCTRICPPVLT*DSHGAGIYACF Trigger: GAAACATGCATAAATGCCAGCCCCATGACTGTCCCACGTAAGCACTGGTGGACAGATTCTGGTGCAGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
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| CDS GCA 72 bp | ACATGTTTCTTCTCTGCACCAGAATCTGTCCACCAGTaGTTACGTGGGACAGTCATGGGGCTGGCATTTATG | + |
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Preference number: 6 (lower is better) Translates to: TCFFSAPESVHQ*LRGTVMGLAFM Trigger: CATAAATGCCAGCCCCATGACTGTCCCACGTAAGCACTGGTGGACAGATTCTGGTGCAGAGAAGAAACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
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| CDS GCA 72 bp | GTGGCTGCATCCCAATTCATCTACGTTGGACTGCTGTaGCAAAATAAGAGTGGGATGAAGAAGGGTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VAASQFIYVGLL*QNKSGMKKGEK Trigger: CTTCTCACCCTTCTTCATCCCACTCTTATTTTGGCACAGCAGTCCAACGTAGATGAATTGGGATGCAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CAA 72 bp | CATATTGCACAACATTCTCCAAATGGGATCTCTGGGTaGGGGCAGTCTAGTGGCTCCTCATCACAGATTATG | + |
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Preference number: 6 (lower is better) Translates to: HIAQHSPNGISG*GQSSGSSSQIM Trigger: CATAATCTGTGATGAGGAGCCACTAGACTGCCCCAACCCAGAGATCCCATTTGGAGAATGTTGTGCAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS TCA 72 bp | GATCTTGAAATCCATTGGATCGTCTCCATAATAGGGTaGAAAGCCACCAGACTTTTCACCTCCAACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: DLEIHWIVSIIG*KATRLFTSNSS Trigger: GCTGGAGTTGGAGGTGAAAAGTCTGGTGGCTTTTCACCCTATTATGGAGACGATCCAATGGATTTCAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087883.13 ENSMUST00000186021.2 |
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| CDS TCA 72 bp | GATCAGGACCCCCAATGTCATAGGGTGCGATATCTATaGTGGGTAGTCTCATTGCCTTGCGTGTTTGATATT | + |
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Preference number: 6 (lower is better) Translates to: DQDPQCHRVRYL*WVVSLPCVFDI Trigger: AATATCAAACACGCAAGGCAATGAGACTACCCATCATAGATATCGCACCCTATGACATTGGGGGTCCTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS CCA 72 bp | ATATTGCACAACATTCTCCAAATGGGATCTCTGGGTTaGGGCAGTCTAGTGGCTCCTCATCACAGATTATGT | + |
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Preference number: 6 (lower is better) Translates to: ILHNILQMGSLG*GSLVAPHHRLC Trigger: ACATAATCTGTGATGAGGAGCCACTAGACTGCCCCAACCCAGAGATCCCATTTGGAGAATGTTGTGCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS TCA 72 bp | ATATCTATGATGGGTAGTCTCATTGCCTTGCGTGTTTaGTATTCAAAGACTGTCTTGCTCCATTCCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: ISMMGSLIALRV*YSKTVLLHSPV Trigger: CACTGGGGAATGGAGCAAGACAGTCTTTGAATATCAAACACGCAAGGCAATGAGACTACCCATCATAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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| CDS GCA 72 bp | CATTTGATCCCATCAGCTTCAGAGACTTCTTTACATTaGCACTGGCCTGATCCATATAGGCAATACTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: HLIPSASETSLH*HWPDPYRQYCF Trigger: AAAACAGTATTGCCTATATGGATCAGGCCAGTGGCAATGTAAAGAAGTCTCTGAAGCTGATGGGATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087883.13 |
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