Pregenerated sensors for COL28A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068794Ensembl transcript IDs: ENSMUST00000115537.2, ENSMUST00000213284.2
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGATGGGTTGTGAAGGTGCTGGAACGGTGTGGGCACAGGGAGGGTaGGGTGTGACCTGTCATTGTTTGTGTACTAGAATGACGAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: LMGCEGAGTVWAQGG*GVTCHCLCTRMTRH Trigger: ATGCCTCGTCATTCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGTTCCAGCACCTTCACAACCCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR CCA 90 bp | AGAATGACGAGGCATCAGGGCCACACCACAGGTTGTGAAGCAAGATaGAGTCTGTGTTCTAAAGTTACACAGCTGAGTTCAGATCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: RMTRHQGHTTGCEAR*SLCSKVTQLSSDPS Trigger: ACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATGCCTCGTCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR GCA 90 bp | AAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATaGTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTAAACCT | + |
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Preference number: 1 (lower is better) Translates to: KVVYAIYEGLYSVSV*SDVVHCLYHTLSKP Trigger: AGGTTTAGAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCTTCATAAATGGCATAGACCACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR CCA 90 bp | TATCATACTGTTAGTGAGTATTCAGACATATTTCTACCATCACTTTaGGCTAAATTCTTAACTCTCCTCACCATCCTTCACCACTACCCC | + |
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Preference number: 1 (lower is better) Translates to: YHTVSEYSDIFLPSL*AKFLTLLTILHHYP Trigger: GGGGTAGTGGTGAAGGATGGTGAGGAGAGTTAAGAATTTAGCCCAAAGTGATGGTAGAAATATGTCTGAATACTCACTAACAGTATGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR-3UTR TCA 90 bp | GGCATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGGGTCTATGCCATTTATaGAGGTCTGTACTCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GIRATPQVVKQDGVCVLKGLCHL*RSVLSQ Trigger: CTGACTGAGTACAGACCTTCATAAATGGCATAGACC...CTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGAATGACGAGGGTGTATGCTCAGATGTaGTGCACTGTTTGTATCACA | + |
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Preference number: 2 (lower is better) Translates to: AQGGWGVTCHCLCTRMTRVYAQM*CTVCIT Trigger: TGTGATACAAACAGTGCACCACATCTGAGCATACAC...CCTCGTCATTCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATATTTCTAAAGTTACACAGCTaGGTTCAGATCCCAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: EEQEESTYHTVSEYSDIFLKLHS*VQIPVL Trigger: AAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAG...AAATATGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATATTTTATGCTCAGATGTGGTaGACTGTTTGTATCACACTC | + |
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Preference number: 2 (lower is better) Translates to: EEQEESTYHTVSEYSDIFYAQMW*TVCITL Trigger: GAGTGTGATACAAACAGTGCACCACATCTGAGCATA...AAATATGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR CCA 72 bp | TCTCCACTGATGGGTTGTGAAGGTGCTGGAACGGTGTaGGCACAGGGAGGGTGGGGTGTGACCTGTCATTGT | + |
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Preference number: 3 (lower is better) Translates to: SPLMGCEGAGTV*AQGGWGVTCHC Trigger: ACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGTTCCAGCACCTTCACAACCCATCAGTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR TCA 72 bp | AAACCAAAGTCCCTCCCCTCACAAACCACTCTCCACTaGTGGGTTGTGAAGGTGCTGGAACGGTGTGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: KPKSLPSQTTLH*WVVKVLERCGH Trigger: GTGCCCACACCGTTCCAGCACCTTCACAACCCATCAGTGGAGAGTGGTTTGTGAGGGGAGGGACTTTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR TCA 72 bp | AAGCAAGATGGAGTCTGTGTTCTAAAGTTACACAGCTaGGTTCAGATCCCAGTCCTTCCACCCTTCAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: KQDGVCVLKLHS*VQIPVLPPFSC Trigger: ACAGCTGAAGGGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCATCTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR GCA 72 bp | TATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATaGTCAGATGTGGTGCACTGTTTGTATCACACTCTC | + |
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Preference number: 3 (lower is better) Translates to: YAIYEGLYSVSV*SDVVHCLYHTL Trigger: GAGAGTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCTTCATAAATGGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| 3UTR CCA 72 bp | GTTAGTGAGTATTCAGACATATTTCTACCATCACTTTaGGCTAAATTCTTAACTCTCCTCACCATCCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: VSEYSDIFLPSL*AKFLTLLTILH Trigger: GTGAAGGATGGTGAGGAGAGTTAAGAATTTAGCCCAAAGTGATGGTAGAAATATGTCTGAATACTCACTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | GTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCCTTCAGCTGTGTAGGCACCCATGCTCTCCCTTCTaGCCAGGGAGGCCAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VTQLSSDPSPSTLQLCRHPCSPF*PGRPRP Trigger: GGGCCTTGGCCTCCCTGGTCAGAAGGGAGAGCATGG...GTGCCTACACAGCTGAAGGGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | ACGGTGTGGGCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGAACCAGGTGGACCAGATaGACCTTGGATCCCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TVWAQGGWGVTCHCLCTRTRWTR*TLDPLL Trigger: GAGCAGGGGATCCAAGGTCCATCTGGTCCACCTGGT...TCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | ACGGTGTGGGCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGAAAATCCCTTTGGACCTaGATCCCCTGGAGGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: TVWAQGGWGVTCHCLCTRKSLWT*IPWRST Trigger: GGTGGACCTCCAGGGGATCCAGGTCCAAAGGGATTT...TCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | AGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATGCTCAGATGTCCTGGAGCCCCCACTaGTCCTCGGGGACCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RWSMPFMKVCTQSVYAQMSWSPH*SSGTLG Trigger: GCCCAGGGTCCCCGAGGACCAGTGGGGGCTCCAGGA...CATCTGAGCATACACTGACTGAGTACAGACCTTCATAAATGGCATAGACCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | TCACCATCCTTCACCACTACCCCAGCATTCACATGTAGACATTCCTACAGTGTTTGGTCCAGGGGGTCCTaGCAATCCTCGCGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SPSFTTTPAFTCRHSYSVWSRGS*QSSRSS Trigger: GCTGGACCGCGAGGATTGCCAGGACCCCCTGGACCA...AACACTGTAGGAATGTCTACATGTGAATGCTGGGGTAGTGGTGAAGGATGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | GTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCCTTCAGCTGTGTAGGCACCCAGTTTCTCCTTTCTaGGCATCACCCGGGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VTQLSSDPSPSTLQLCRHPVSPF*ASPGFP Trigger: AGGAAACCCGGGTGATGCTCAGAAAGGAGAAACTGG...GTGCCTACACAGCTGAAGGGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR GCA 90 bp | GTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTAAACCTCTGATCCTGGGAGCCCCACTGTaGCTGGCTCCCCCTTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: VCSDVVHCLYHTLSKPLILGAPL*LAPPLD Trigger: GTCCAAAGGGGGAGCCAGGCACAGTGGGGCTCCCAG...GATCAGAGGTTTAGAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR GCA 90 bp | ACGGTGTGGGCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGATCCTTGCTGGAAAACTaGTTCAGGCTAGCCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: TVWAQGGWGVTCHCLCTRSLLEN*FRLATF Trigger: GAAGGTGGCTAGCCTGAAGCAGTTTTCCAGCAAGGA...TCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | GTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCCTTCAGCTGTGTAGGCACTCCTCTTGGTCCCTTTaGTCCATATGGCCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VTQLSSDPSPSTLQLCRHSSWSL*SIWPFR Trigger: CCTGAAGGGCCATATGGACCAAAGGGACCAAGAGGA...GTGCCTACACAGCTGAAGGGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | GCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGAATGACGAGGCCCCCTTATCCCCTTTaGTTGACAGGCCTTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: AQGGWGVTCHCLCTRMTRPPYPL*LTGLVI Trigger: GATTACAAGGCCTGTCAATCAAAGGGGATAAGGGGG...CCTCGTCATTCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | TCACCATCCTTCACCACTACCCCAGCATTCACATGTAGACATTCCTACAGTGTTGACCTGGAGGGCCTCTaGCTCCTGGTTCTCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SPSFTTTPAFTCRHSYSVDLEGL*LLVLPL Trigger: CAAAGGGAGAACCAGGAGTCAGAGGCCCTCCAGGTC...AACACTGTAGGAATGTCTACATGTGAATGCTGGGGTAGTGGTGAAGGATGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | GTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCAGGACCACGGGGACCTaGCTGTCCGGGTTCACCAAT | + |
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Preference number: 4 (lower is better) Translates to: VLSQCMLRCGALFVSHSLRTTGT*LSGFTN Trigger: ATTGGTGAACCCGGACAGCCAGGTCCCCGTGGTCCT...GAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | CCAGCATTCACATGTAGACATTCCTACAGTGTTCAAACCAAAGTCCCTCCCCTCTTCCTTCATCACCCTTaGGGCCGGGCTGTCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PAFTCRHSYSVQTKVPPLFLHHP*GRAVLS Trigger: GGAAAGGACAGCCCGGCCCCAAGGGTGATGAAGGAA...GAGGGGAGGGACTTTGGTTTGAACACTGTAGGAATGTCTACATGTGAATGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | GTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTGGCCCTTCGGGTCCTaGAAACCCCCTCTGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VLSQCMLRCGALFVSHSLWPFGS*KPPLSL Trigger: CAAGGACAGAGGGGGTTTCCAGGACCCGAAGGGCCA...GAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTGTGTTCTAAAGTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCGGCTTCAGGTGGGGTTaGGATGGCCAAGATACCAGC | + |
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Preference number: 4 (lower is better) Translates to: WSLCSKVTQLSSDPSPSTGFRWG*DGQDTS Trigger: GCTGGTATCTTGGCCATCCCAACCCCACCTGAAGCC...GGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | ATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATTCCCTTAGGACCAGGTaGGCCTTGTCCTGGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: IPRRWSMPFMKVCTQSVYSLRTR*ALSWGS Trigger: GGACCCCCAGGACAAGGCTCACCTGGTCCTAAGGGA...ATACACTGACTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR GCA 90 bp | ACGGTGTGGGCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGATCTTGGGATGATCGATaGCATCAGTCATCAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TVWAQGGWGVTCHCLCTRSWDDR*HQSSAK Trigger: CTTTGCTGATGACTGATGGCATCGATCATCCCAAGA...TCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR GCA 90 bp | ATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATATTCCCGCTGGCCCCTaGGGTCCCACAGGTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IPRRWSMPFMKVCTQSVYIPAGP*GPTGPK Trigger: TTTGGGACCTGTGGGACCGCAGGGGCCAGCGGGAAT...ATACACTGACTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | GTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGGTACCAGGAGGCCCTaGGTCACCTGGCTCGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: VKALTPMRNRKSQLIILLGTRRP*VTWLAL Trigger: AAGGGCGAGCCAGGTGACCCAGGGCCTCCTGGTACC...TAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | CATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGTTAATACCAGGGGCTCCTaGAGGACCATAAGGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: HQGHTTGCEARWSLCSKVNTRGS*RTIRTR Trigger: CCTGGTCCTTATGGTCCTCCAGGAGCCCCTGGTATT...AACTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | GTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCACCTGGCTCTCCCTTTaGCCCTTCGGGTCCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: VLSQCMLRCGALFVSHSLTWLSL*PFGSWK Trigger: TTTCCAGGACCCGAAGGGCCAAAGGGAGAGCCAGGT...GAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACACCGAGCTGCTAAACTaGAGGGCTGCCAGCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: RSVLSQCMLRCGALFVSHTELLN*RAASLM Trigger: CATCAAGCTGGCAGCCCTTCAGTTTAGCAGCTCGGT...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | TCACCATCCTTCACCACTACCCCAGCATTCACATGTAGACATTCCTACAGTGTTCTGTCTGTCCATCCGTaGTCACCAAGGCCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SPSFTTTPAFTCRHSYSVLSVHP*SPRPPS Trigger: AGAAGGTGGCCTTGGTGATCACGGATGGACAGACAG...AACACTGTAGGAATGTCTACATGTGAATGCTGGGGTAGTGGTGAAGGATGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACCCCAGGCATTCCTTCTaGGCCTCTTGTTCCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RSVLSQCMLRCGALFVSHPRHSF*ASCSWK Trigger: CTTCCAGGAACAAGAGGCCCAGAAGGAATGCCTGGG...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | CATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGTTTCCTCGGTCTCCCTTTaGTCCAGATGGTCCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: HQGHTTGCEARWSLCSKVSSVSL*SRWSRN Trigger: ATTCCTGGACCATCTGGACCAAAGGGAGACCGAGGA...AACTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | TCACCATCCTTCACCACTACCCCAGCATTCACATGTAGACATTCCTACAGTGTTTCTGGGCTCTTGGGATaGTCGATGCCATCAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: SPSFTTTPAFTCRHSYSVSGLLG*SMPSVI Trigger: GATGACTGATGGCATCGATCATCCCAAGAGCCCAGA...AACACTGTAGGAATGTCTACATGTGAATGCTGGGGTAGTGGTGAAGGATGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | TCAGACTGTATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGCCCTTTAATTCCTTGTaGTCCATAGCCAGGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SDCIPRRWSMPFMKVCTQPFNSL*SIARGP Trigger: GGGCCCCCTGGCTATGGATCACAAGGAATTAAAGGG...CTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGATACAGTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | GGCATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGTGGTCCCACACTTTCTaGACTGTCAATCACAAACAC | + |
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Preference number: 4 (lower is better) Translates to: GIRATPQVVKQDGVCVLKWSHTF*TVNHKH Trigger: GTGTTTGTGATTGACAGTTCAGAAAGTGTGGGACCA...CTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | ACGGTGTGGGCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGATCACAAAACTTTGGATaGTCTGAAAGTTCTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TVWAQGGWGVTCHCLCTRSQNFG*SESSLV Trigger: GACCAGAGAACTTTCAGATCATCCAAAGTTTTGTGA...TCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR TCA 90 bp | CATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGTTGTGGAATCTGTTTCCTaGGCCATTGCAGCCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: HQGHTTGCEARWSLCSKVVESVS*AIAATE Trigger: TTCAGTGGCTGCAATGGCTCAGGAAACAGATTCCAC...AACTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR GCA 90 bp | AGTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTGGCCAAGGCCCACTGTaGCCTTTGACCCTGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SEGFDTNEEQEESTYHTVGQGPL*PLTLGN Trigger: GTTTCCCAGGGTCAAAGGGCACAGTGGGCCTTGGCC...AACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | GGCATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGGTAGAACGGGTTCATTaGAAGGATCCCCAGATATCA | + |
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Preference number: 4 (lower is better) Translates to: GIRATPQVVKQDGVCVLKVERVH*KDPQIS Trigger: TGATATCTGGGGATCCTTCCAATGAACCCGTTCTAC...CTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | CCAGCATTCACATGTAGACATTCCTACAGTGTTCAAACCAAAGTCCCTCCCCTCGCCCTGAATTCCTCTTaGTCCCTTTGGTCCATATGG | + |
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Preference number: 4 (lower is better) Translates to: PAFTCRHSYSVQTKVPPLALNSS*SLWSIW Trigger: CCATATGGACCAAAGGGACCAAGAGGAATTCAGGGC...GAGGGGAGGGACTTTGGTTTGAACACTGTAGGAATGTCTACATGTGAATGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | GTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGGGGCCCATAACACCTaGCTCTCCCTTTGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKALTPMRNRKSQLIILLGAHNT*LSLWPF Trigger: GAAGGGCCAAAGGGAGAGCCAGGTGTTATGGGCCCC...TAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTAAACCTCTGATCTCACCCTTTGGTCCTTaGGTTCCTATTCCCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VCSDVVHCLYHTLSKPLISPFGP*VPIPRG Trigger: GCCTCGGGGAATAGGAACCCAAGGACCAAAGGGTGA...GATCAGAGGTTTAGAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCATTCACATGTAGACATTCCTACAGTGTTCAAACCAAAGTCCCTCCCCTCACACCCAGGCGTTCCTaGATTCTGTCTACAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PAFTCRHSYSVQTKVPPLTPRRS*ILSTSV Trigger: AACACTTGTAGACAGAATTCAGGAACGCCTGGGTGT...GAGGGGAGGGACTTTGGTTTGAACACTGTAGGAATGTCTACATGTGAATGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR GCA 90 bp | GGCATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGGCTAAACTGAAGGGCTaGCAGCTTGATGTCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: GIRATPQVVKQDGVCVLKAKLKG*QLDVIF Trigger: AAATATGACATCAAGCTGGCAGCCCTTCAGTTTAGC...CTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR GCA 90 bp | GTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCCTTCAGCTGTGTAGGCACCTTAGACATTTCTTTTaGAGGCTTTGGAGTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: VTQLSSDPSPSTLQLCRHLRHFF*RLWSGY Trigger: GTATCCACTCCAAAGCCTGCAAAAGAAATGTCTAAG...GTGCCTACACAGCTGAAGGGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTATACCAGGGTTTCCATaGGTACCAGGAGGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEGFDTNEEQEESTYHTVIPGFP*VPGGPG Trigger: CCCAGGGCCTCCTGGTACCCATGGAAACCCTGGTAT...AACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACACCCGGGTTTCCTTTTaGTCCTCGCTCACCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSVLSQCMLRCGALFVSHTRVSF*SSLTFD Trigger: ATCAAAGGTGAGCGAGGACCAAAAGGAAACCCGGGT...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCCTTGTGGGCCGATTaGTCCTTCAGATCCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSVLSQCMLRCGALFVSHSLWAD*SFRSLF Trigger: GAAAAGGGATCTGAAGGACCAATCGGCCCACAAGGA...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | TCAGACTGTATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCCTTGAGGACCAGGTaGACCAGATGGACCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SDCIPRRWSMPFMKVCTQSLRTR*TRWTLD Trigger: ATCCAAGGTCCATCTGGTCCACCTGGTCCTCAAGGA...CTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGATACAGTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCCCACGTTGGAGTCATTaGCATCCTTCACCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSQCMLRCGALFVSHSLPRWSH*HPSPHL Trigger: CAGATGTGGTGAAGGATGCCAATGACTCCAACGTGG...GAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTCCTGTGGGTCCCATCTaGCCTACTTCTCCCTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEGFDTNEEQEESTYHTVPVGPI*PTSPLG Trigger: TCCTAAGGGAGAAGTAGGTCAGATGGGACCCACAGG...AACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | GTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTAAACCTCTGATCCCTTGTGGCTATAGTTaGTTATGCCTATCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCSDVVHCLYHTLSKPLIPCGYS*LCLSGL Trigger: CAGCCCGGATAGGCATAATCAACTATAGCCACAAGG...GATCAGAGGTTTAGAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | TCACCATCCTTCACCACTACCCCAGCATTCACATGTAGACATTCCTACAGTGTTCGGCCAGGAGTCAACTaGAAAATCTTCTCACTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSFTTTPAFTCRHSYSVRPGVN*KIFSLK Trigger: CTTGAGTGAGAAGATTTTCCAGTTGACTCCTGGCCG...AACACTGTAGGAATGTCTACATGTGAATGCTGGGGTAGTGGTGAAGGATGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTTCTTTTGCAGGCTTTaGAGTGGATACGCTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLSQCMLRCGALFVSHSLFFCRL*SGYADL Trigger: GAGGTCAGCGTATCCACTCCAAAGCCTGCAAAAGAA...GAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATGCTCAAGTGTATTGGTaGCTTCAGGTGGGGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPRRWSMPFMKVCTQSVYAQVYW*LQVGLG Trigger: TCCCAACCCCACCTGAAGCCACCAATACACTTGAGC...ATACACTGACTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCTGTGTTCTAAAGTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCAAACTTTGGATGATCTaGAAGTTCTCTGGTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: WSLCSKVTQLSSDPSPSTKLWMI*KFSGPT Trigger: TGTGGGACCAGAGAACTTTCAGATCATCCAAAGTTT...GGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGCCAGTGGAGTCTCTTTaGATTTGGGCCCACAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KALTPMRNRKSQLIILLVPVESL*IWAHNH Trigger: GTGGTTGTGGGCCCAAATGCAAAGAGACTCCACTGG...CACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACGAACATGTCATTAGCTaGTTGAAGAGCAGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSVLSQCMLRCGALFVSHEHVIS*LKSSGC Trigger: ACAGCCACTGCTCTTCAAGCAGCTAATGACATGTTC...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGTCTGTGTTCTAAAGTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCATCCTTCACCACATCTaGCAGCTTCTTTTTATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: WSLCSKVTQLSSDPSPSTILHHI*QLLFIS Trigger: CGAGATAAAAAGAAGCTGGCAGATGTGGTGAAGGAT...GGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GGCATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGTTGAGTCATAAAAGCTaGCAAAAGCAGAAGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GIRATPQVVKQDGVCVLKLSHKS*QKQKTE Trigger: TTCTGTCTTCTGCTTTTGCCAGCTTTTATGACTCAA...CTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATGCTCAGATGGTCACCTTTCATTCCTaGTTTCCCACATTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RWSMPFMKVCTQSVYAQMVTFHS*FPTFSS Trigger: CGAGGAGAATGTGGGAAACCAGGAATGAAAGGTGAC...CATCTGAGCATACACTGACTGAGTACAGACCTTCATAAATGGCATAGACCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTATTGGTGGCTTCAGGTaGGGTTGGGATGGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SEGFDTNEEQEESTYHTVIGGFR*GWDGQD Trigger: ATCTTGGCCATCCCAACCCCACCTGAAGCCACCAAT...AACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGTCTGTGTTCTAAAGTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCGAAGTCATTTTTCCTTaGAAGTGTGTTTGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSLCSKVTQLSSDPSPSTEVIFP*KCVWLW Trigger: CCAAAGCCAAACACACTTGCAAGGAAAAATGACTTC...GGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR GCA 90 bp | CCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACACCTTCCCCCAGATACTaGATGTTGTCTACCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PMRNRKSQLIILLVSIQTPSPRY*MLSTTS Trigger: GCTGGTGGTAGACAACATGCAGTATCTGGGGGAAGG...TGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACCTTTACACCTGGCCTTaGCTCTTTGAACATGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RSVLSQCMLRCGALFVSHLYTWP*LFEHVI Trigger: AATGACATGTTCAAAGAGGCAAGGCCAGGTGTAAAG...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCTGTGTTCTAAAGTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCTCCAACGGTGATAAATaGTATTCCCAAAATTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSLCSKVTQLSSDPSPSTSNGDK*YSQNSS Trigger: GCTAGAATTTTGGGAATATCATTTATCACCGTTGGA...GGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | TCAGACTGTATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGCCTTGCAAGTGTGTTTaGCTTTGGTCCTTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDCIPRRWSMPFMKVCTQPCKCV*LWSFLS Trigger: AGAAAGAAAGGACCAAAGCCAAACACACTTGCAAGG...CTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGATACAGTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | TCACCATCCTTCACCACTACCCCAGCATTCACATGTAGACATTCCTACAGTGTTGTAGCCTTGTGGCATTaGAGATGGCATAATAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSFTTTPAFTCRHSYSVVALWH*RWHNKK Trigger: TTTCTTATTATGCCATCTCCAATGCCACAAGGCTAC...AACACTGTAGGAATGTCTACATGTGAATGCTGGGGTAGTGGTGAAGGATGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATATTTAGGGCCTCTGACTCCTaGTTCTCCCTTTGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EEQEESTYHTVSEYSDIFRASDS*FSLCSS Trigger: ACTGGAGCAAAGGGAGAACCAGGAGTCAGAGGCCCT...AAATATGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | TCAGACTGTATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGGAGTCTCTTTGCATTTaGGCCCACAACCACATATTT | + |
|
Preference number: 4 (lower is better) Translates to: SDCIPRRWSMPFMKVCTQESLCI*AHNHIF Trigger: AAATATGTGGTTGTGGGCCCAAATGCAAAGAGACTC...CTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGATACAGTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGAAGTTTGGCTTCATTaGCCACAGTGGAAAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VKALTPMRNRKSQLIILLEVWLH*PQWKVQ Trigger: TTGGACTTTCCACTGTGGTCAATGAAGCCAAACTTC...TAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGTCACCCTTATTTCCTTaGAATCCCTTTGGACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KALTPMRNRKSQLIILLVSPLFP*NPFGPG Trigger: TCCAGGTCCAAAGGGATTTCAAGGAAATAAGGGTGA...CACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATATTTGGACATCTGGGCTCTTaGGATGATCGATGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEQEESTYHTVSEYSDIFGHLGS*DDRCHQ Trigger: CTGATGGCATCGATCATCCCAAGAGCCCAGATGTCC...AAATATGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGTGTCCATACACTGCTTaGGTCATAAAAGCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KALTPMRNRKSQLIILLVCPYTA*VIKAGK Trigger: TTTGCCAGCTTTTATGACTCAAGCAGTGTATGGACA...CACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACTTTTTAGACAACTTTTaGTTCAGAGTATCTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSVLSQCMLRCGALFVSHFLDNF*FRVSCR Trigger: CCTGCAAGATACTCTGAAGCAAAAGTTGTCTAAAAA...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATATTTTCCCTTTGGTCCATATaGCCCTTCAGGTCCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EEQEESTYHTVSEYSDIFSLWSI*PFRSFV Trigger: GACAAAGGACCTGAAGGGCCATATGGACCAAAGGGA...AAATATGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | CCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACACACCTTCTTTACACCTaGCCTTGCCTCTTTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PMRNRKSQLIILLVSIQTHLLYT*PCLFEH Trigger: ATGTTCAAAGAGGCAAGGCCAGGTGTAAAGAAGGTG...TGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATATTTATGGCTCAAGTGTATTaGTGGCTTCAGGTGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEQEESTYHTVSEYSDIFMAQVY*WLQVGL Trigger: CAACCCCACCTGAAGCCACCAATACACTTGAGCCAT...AAATATGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | CCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATCTTCACCACTCCAATaGCAAATATTTCCACGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PMRNRKSQLIILLVSIQTSSPLQ*QIFPRW Trigger: CCAACGTGGAAATATTTGTCATTGGAGTGGTGAAGA...TGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTAAACCTCTGATCCTGACTGTAACAAATTaGGATTTGGAGTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCSDVVHCLYHTLSKPLILTVTN*DLEFLF Trigger: AAACAAGAACTCCAAATCCCAATTTGTTACAGTCAG...GATCAGAGGTTTAGAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | TTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATGAAGGGCTGCCAGCTTaGTGTCATATTTTAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FDTNEEQEESTYHTVSEYEGLPA*CHILMN Trigger: GTTCATTAAAATATGACATCAAGCTGGCAGCCCTTC...ATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAAGGTTGAAAAGATGGTaGTCCAAAAACTTGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKALTPMRNRKSQLIILLRLKRW*SKNLNE Trigger: CTCATTCAAGTTTTTGGATCACCATCTTTTCAACCT...TAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATATTTAAACACCAACTCCAGTaGAGTCTCTTTGCATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EEQEESTYHTVSEYSDIFKHQLQ*SLFAFG Trigger: CCCAAATGCAAAGAGACTCCACTGGAGTTGGTGTTT...AAATATGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GAGTATTCAGACATATTTCTACCATCACTTTGGGCTAAATTCTTAACTCTCCTCGGCTTCCTCGCATCTTaGATCTTTGTACAGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: EYSDIFLPSLWAKFLTLLGFLAS*IFVQRF Trigger: AAATCTCTGTACAAAGATCCAAGATGCGAGGAAGCC...GAGGAGAGTTAAGAATTTAGCCCAAAGTGATGGTAGAAATATGTCTGAATACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR TCA 90 bp | GAGTATTCAGACATATTTCTACCATCACTTTGGGCTAAATTCTTAACTCTCCTCAAGAAGTCGTCAAACTaGTACACATGTTCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: EYSDIFLPSLWAKFLTLLKKSSN*YTCSAS Trigger: TGATGCAGAACATGTGTATCAGTTTGACGACTTCTT...GAGGAGAGTTAAGAATTTAGCCCAAAGTGATGGTAGAAATATGTCTGAATACTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CCA 90 bp | GAGTATTCAGACATATTTCTACCATCACTTTGGGCTAAATTCTTAACTCTCCTCCAAAGAGTACAATTTTaGAGCTTTCTGAGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EYSDIFLPSLWAKFLTLLQRVQF*SFLSCP Trigger: TGGACAGCTCAGAAAGCTCCAAAATTGTACTCTTTG...GAGGAGAGTTAAGAATTTAGCCCAAAGTGATGGTAGAAATATGTCTGAATACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CCA 90 bp | GTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTATCAGTCTCTTCATTTTaGCCTCTAGAAACATTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VKALTPMRNRKSQLIILLSVSSF*PLETLN Trigger: GTTTAATGTTTCTAGAGGCCAAAATGAAGAGACTGA...TAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR GCA 90 bp | GAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATATTTCTGATACACATGTTCTaGATCAGTAGCAATGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: EEQEESTYHTVSEYSDIFLIHMF*ISSNEI Trigger: AATCTCATTGCTACTGATGCAGAACATGTGTATCAG...AAATATGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS GCA 90 bp | GTGGACCAGATGGACCTTGGATCCCCTGCTCGCCTTGGCTTCCGATaGCAGGAATTCCCGCTGGCCCCTGCGGTCCCACAGGTCCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VDQMDLGSPARLGFR*QEFPLAPAVPQVPN Trigger: ATTTGGGACCTGTGGGACCGCAGGGGCCAGCGGGAATTCCTGGCATCGGAAGCCAAGGCGAGCAGGGGATCCAAGGTCCATCTGGTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CCA 90 bp | CACTGTGCCTGGCTCCCCCTTTGGACCCTGTACTCCAATGCCCATTaGTCCTCTAGGCCCTGTGGGTCCCATCTGACCTACTTCTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HCAWLPLWTLYSNAH*SSRPCGSHLTYFSL Trigger: AAGGGAGAAGTAGGTCAGATGGGACCCACAGGGCCTAGAGGACCAATGGGCATTGGAGTACAGGGTCCAAAGGGGGAGCCAGGCACAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | ACGGTGTGGGCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGAGCCAGGCAGGCCCTTTaGCCCAGTATCACCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVWAQGGWGVTCHCLCTRARQAL*PSITLW Trigger: CCAAAGGGTGATACTGGGCAAAAGGGCCTGCCTGGC...TCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS TCA 90 bp | CTTTCTGAGCATCACCCGGGTTTCCTTTTGGTCCTCGCTCACCTTTaGTACCAGGGTTTCCATGGGTACCAGGAGGCCCTGGGTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSEHHPGFLLVLAHL*YQGFHGYQEALGHL Trigger: CAGGTGACCCAGGGCCTCCTGGTACCCATGGAAACCCTGGTATCAAAGGTGAGCGAGGACCAAAAGGAAACCCGGGTGATGCTCAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CCA 90 bp | AGGAGGACCTGGCTCACCCTTATTTCCTTGAAATCCCTTTGGACCTaGATCCCCTGGAGGTCCACCAATGCCCTGAATTCCTCTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRTWLTLISLKSLWT*IPWRSTNALNSSWS Trigger: GGACCAAGAGGAATTCAGGGCATTGGTGGACCTCCAGGGGATCCAGGTCCAAAGGGATTTCAAGGAAATAAGGGTGAGCCAGGTCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CCA 90 bp | GACCCGCTGCTTAAATGTCCGGAGATCCTTCCAAGAAGACAAGGGTaGATCAATCTGGACCGAGCTGCTAAACTGAAGGGCTGCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DPLLKCPEILPRRQG*INLDRAAKLKGCQL Trigger: AAGCTGGCAGCCCTTCAGTTTAGCAGCTCGGTCCAGATTGATCCACCCTTGTCTTCTTGGAAGGATCTCCGGACATTTAAGCAGCGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS CCA 90 bp | ATCCCCTGGAGGTCCACCAATGCCCTGAATTCCTCTTGGTCCCTTTaGTCCATATGGCCCTTCAGGTCCTTTGTCACCTTTCATTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IPWRSTNALNSSWSL*SIWPFRSFVTFHSW Trigger: CCAGGAATGAAAGGTGACAAAGGACCTGAAGGGCCATATGGACCAAAGGGACCAAGAGGAATTCAGGGCATTGGTGGACCTCCAGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CCA 90 bp | TGGCTCACCCTTATTTCCTTGAAATCCCTTTGGACCTGGATCCCCTaGAGGTCCACCAATGCCCTGAATTCCTCTTGGTCCCTTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLTLISLKSLWTWIP*RSTNALNSSWSLWS Trigger: GGACCAAAGGGACCAAGAGGAATTCAGGGCATTGGTGGACCTCCAGGGGATCCAGGTCCAAAGGGATTTCAAGGAAATAAGGGTGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GGCATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGTCACCCTTGTCACCCTaGTACCCAGGGATTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GIRATPQVVKQDGVCVLKSPLSP*YPGIPT Trigger: TGTGGGAATCCCTGGGTACAAGGGTGACAAGGGTGA...CTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | ACGGTGTGGGCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGACCTGGCCTTGCCTCTTaGAACATGTCATTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVWAQGGWGVTCHCLCTRPGLAS*NMSLAA Trigger: AGCAGCTAATGACATGTTCAAAGAGGCAAGGCCAGG...TCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | ACGGTGTGGGCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGATCCCCCTTATCCCCTTaGATTGACAGGCCTTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: TVWAQGGWGVTCHCLCTRSPLSP*IDRPCN Trigger: ATTACAAGGCCTGTCAATCAAAGGGGATAAGGGGGA...TCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGCCCACACCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACGATCCCCTGCTCGCCTaGGCTTCCGATGCCAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSVLSQCMLRCGALFVSHDPLLA*ASDARN Trigger: ATTCCTGGCATCGGAAGCCAAGGCGAGCAGGGGATC...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACTGCCTGGCTCCCCCTTaGGACCCTGTACTCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: RSVLSQCMLRCGALFVSHCLAPP*DPVLQC Trigger: GCATTGGAGTACAGGGTCCAAAGGGGGAGCCAGGCA...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | TCAGACTGTATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGCACCACGTAAGCCCATaGGTCCAGGGGGTCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDCIPRRWSMPFMKVCTQHHVSP*VQGVLA Trigger: TGCCAGGACCCCCTGGACCAATGGGCTTACGTGGTG...CTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGATACAGTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS GCA 90 bp | CTGTCCATCCGTGATCACCAAGGCCACCTTCTTTACACCTGGCCTTaGCTCTTTGAACATGTCATTAGCTGCTTGAAGAGCAGTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSIRDHQGHLLYTWP*LFEHVISCLKSSGC Trigger: ACAGCCACTGCTCTTCAAGCAGCTAATGACATGTTCAAAGAGGCAAGGCCAGGTGTAAAGAAGGTGGCCTTGGTGATCACGGATGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTCTCCTCGTTCACCCTaGTCACCCTTGTACCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLSQCMLRCGALFVSHSLSPRSP*SPLYPG Trigger: CCCTGGGTACAAGGGTGACAAGGGTGAACGAGGAGA...GAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | TCACCATCCTTCACCACTACCCCAGCATTCACATGTAGACATTCCTACAGTGTTCAGATGGTCCAGGAATaGAGGCTCCGGGCATTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SPSFTTTPAFTCRHSYSVQMVQE*RLRAFR Trigger: TCGGAATGCCCGGAGCCTCAATTCCTGGACCATCTG...AACACTGTAGGAATGTCTACATGTGAATGCTGGGGTAGTGGTGAAGGATGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GCACAGGGAGGGTGGGGTGTGACCTGTCATTGTTTGTGTACTAGAATGACGAGGGGAGTCTCTTTGCATTaGGGCCCACAACCACATATT | + |
|
Preference number: 5 (lower is better) Translates to: AQGGWGVTCHCLCTRMTRGVSLH*GPQPHI Trigger: AATATGTGGTTGTGGGCCCAAATGCAAAGAGACTCC...CCTCGTCATTCTAGTACACAAACAATGACAGGTCACACCCCACCCTCCCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCCTTCAGCTGTGTAGGCACTCCTTGCAAGTGTGTTaGGCTTTGGTCCTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTQLSSDPSPSTLQLCRHSLQVC*ALVLSF Trigger: GAAAGAAAGGACCAAAGCCAAACACACTTGCAAGGA...GTGCCTACACAGCTGAAGGGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTCTGTGTTCTAAAGTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCTTCCTTCTGGGCCTCTaGTTCCTGGAAGTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WSLCSKVTQLSSDPSPSTFLLGL*FLEVQL Trigger: AAGCTGGACTTCCAGGAACAAGAGGCCCAGAAGGAA...GGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTAAACCTCTGATCCTCCTGGTTCTCCCTTaGCTCCAGTGTCTCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: VCSDVVHCLYHTLSKPLILLVLP*LQCLPH Trigger: GTGTGGGAGACACTGGAGCAAAGGGAGAACCAGGAG...GATCAGAGGTTTAGAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS GCA 90 bp | CATCTTCAGAAATACTTTGGACATCTGGGCTCTTGGGATGATCGATaGCATCAGTCATCAGCAAAGCCACCTTCACGCCATCTTTACGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLQKYFGHLGSWDDR*HQSSAKPPSRHLYA Trigger: GGCGTAAAGATGGCGTGAAGGTGGCTTTGCTGATGACTGATGGCATCGATCATCCCAAGAGCCCAGATGTCCAAAGTATTTCTGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS CCA 90 bp | ATCTGTCTGTCCATCCGTGATCACCAAGGCCACCTTCTTTACACCTaGCCTTGCCTCTTTGAACATGTCATTAGCTGCTTGAAGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ICLSIRDHQGHLLYT*PCLFEHVISCLKSS Trigger: ACTGCTCTTCAAGCAGCTAATGACATGTTCAAAGAGGCAAGGCCAGGTGTAAAGAAGGTGGCCTTGGTGATCACGGATGGACAGACAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCCTTCAGCTGTGTAGGCACTGGTCCTTTCTTTCTTaGTCCATACACTGCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VTQLSSDPSPSTLQLCRHWSFLS*SIHCLS Trigger: ACTCAAGCAGTGTATGGACAAAGAAAGAAAGGACCA...GTGCCTACACAGCTGAAGGGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCCTTCAGCTGTGTAGGCACTCAAAGAGTACAATTTaGGAGCTTTCTGAGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTQLSSDPSPSTLQLCRHSKSTI*ELSELS Trigger: GGACAGCTCAGAAAGCTCCAAAATTGTACTCTTTGA...GTGCCTACACAGCTGAAGGGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | AGTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTGGCCCACTGTGCCCTTaGACCCTGGGAAACCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SEGFDTNEEQEESTYHTVGPLCP*TLGNLE Trigger: CTCAAGGTTTCCCAGGGTCAAAGGGCACAGTGGGCC...AACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GGCATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGTTGCTTCAGAGTATCTaGCAGGGTAAAGAAGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GIRATPQVVKQDGVCVLKLLQSI*QGKEVV Trigger: GACGACTTCTTTACCCTGCAAGATACTCTGAAGCAA...CTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS TCA 90 bp | TTCCAAGAAGACAAGGGTGGATCAATCTGGACCGAGCTGCTAAACTaGAGGGCTGCCAGCTTGATGTCATATTTTAATGAACGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FQEDKGGSIWTELLN*RAASLMSYFNERPG Trigger: TCCTGGCCGTTCATTAAAATATGACATCAAGCTGGCAGCCCTTCAGTTTAGCAGCTCGGTCCAGATTGATCCACCCTTGTCTTCTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS-3UTR CAA 90 bp | AGTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTTTTCCTTCATCACCCTaGGGGCCGGGCTGTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SEGFDTNEEQEESTYHTVFPSSP*GPGCPF Trigger: GAAAGGACAGCCCGGCCCCAAGGGTGATGAAGGAAA...AACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | CATCAGGGCCACACCACAGGTTGTGAAGCAAGATGGAGTCTGTGTTCTAAAGTTTTGTCTACCACCAGCTaGAAGTCATCCTTGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HQGHTTGCEARWSLCSKVLSTTS*KSSLLE Trigger: TTCCAGCAAGGATGACTTCAAGCTGGTGGTAGACAA...AACTTTAGAACACAGACTCCATCTTGCTTCACAACCTGTGGTGTGGCCCTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACCTGTTTCCTGAGCCATaGCAGCCACTGAACCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSVLSQCMLRCGALFVSHLFPEP*QPLNQK Trigger: CTTTTGGTTCAGTGGCTGCAATGGCTCAGGAAACAG...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS TCA 90 bp | ATTCTAGCATCTTCAGAAATACTTTGGACATCTGGGCTCTTGGGATaGTCGATGCCATCAGTCATCAGCAAAGCCACCTTCACGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: ILASSEILWTSGLLG*SMPSVISKATFTPS Trigger: AGATGGCGTGAAGGTGGCTTTGCTGATGACTGATGGCATCGATCATCCCAAGAGCCCAGATGTCCAAAGTATTTCTGAAGATGCTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS-3UTR CAA 90 bp | AGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGCCCTGAATTCCTCTaGGTCCCTTTGGTCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: RWSMPFMKVCTQSVYAQMCPEFL*VPLVHM Trigger: CATATGGACCAAAGGGACCAAGAGGAATTCAGGGCA...CATCTGAGCATACACTGACTGAGTACAGACCTTCATAAATGGCATAGACCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTACTCACCCTTAACACCTaGCTGTCCAATACCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKALTPMRNRKSQLIILLLTLNT*LSNTRG Trigger: GCCCCTGGTATTGGACAGCAAGGTGTTAAGGGTGAG...TAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | TCACCATCCTTCACCACTACCCCAGCATTCACATGTAGACATTCCTACAGTGTTAAACCCCCTCTGTCCTaGATTTCCTTTGCTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPSFTTTPAFTCRHSYSVKPPLS*ISFAPF Trigger: AAAGGGAGCAAAGGAAATCAAGGACAGAGGGGGTTT...AACACTGTAGGAATGTCTACATGTGAATGCTGGGGTAGTGGTGAAGGATGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | ATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATTCCAGTGGAGTCTCTTaGCATTTGGGCCCACAACCA | + |
|
Preference number: 5 (lower is better) Translates to: IPRRWSMPFMKVCTQSVYSSGVS*HLGPQP Trigger: TGGTTGTGGGCCCAAATGCAAAGAGACTCCACTGGA...ATACACTGACTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTCTGTGTTCTAAAGTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCCATGTCATTAGCTGCTaGAAGAGCAGTGGCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: WSLCSKVTQLSSDPSPSTHVISC*KSSGCI Trigger: TATACAGCCACTGCTCTTCAAGCAGCTAATGACATG...GGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS-3UTR CAA 90 bp | GTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTAAACCTCTGATCTCCACGTTGGAGTCATaGGCATCCTTCACCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: VCSDVVHCLYHTLSKPLISTLES*ASFTTS Trigger: AGATGTGGTGAAGGATGCCAATGACTCCAACGTGGA...GATCAGAGGTTTAGAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCTGTACTCAGTCAGTGTATGCTCAGATGTGGTGCACTGTTTGTATCACACGGGCTTCCTCGCATCTaGGATCTTTGTACAGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: RSVLSQCMLRCGALFVSHGLPRI*DLCTEI Trigger: AATCTCTGTACAAAGATCCAAGATGCGAGGAAGCCC...GTGTGATACAAACAGTGCACCACATCTGAGCATACACTGACTGAGTACAGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS GCA 90 bp | GACAAATATTTCCACGTTGGAGTCATTGGCATCCTTCACCACATCTaGCAGCTTCTTTTTATCTCGGGAATCTGTCTGTCCATCCGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DKYFHVGVIGILHHI*QLLFISGICLSIRD Trigger: ATCACGGATGGACAGACAGATTCCCGAGATAAAAAGAAGCTGGCAGATGTGGTGAAGGATGCCAATGACTCCAACGTGGAAATATTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | CCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACAGGTCCTCGCTCACCTTaGATACCAGGGTTTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PMRNRKSQLIILLVSIQTGPRSP*IPGFPW Trigger: CCATGGAAACCCTGGTATCAAAGGTGAGCGAGGACC...TGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGGCCCTTCAGGTCCTTaGTCACCTTTCATTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VKALTPMRNRKSQLIILLGPSGP*SPFIPG Trigger: ACCAGGAATGAAAGGTGACAAAGGACCTGAAGGGCC...TAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | AGTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTTTCCTTGAAATCCCTTaGGACCTGGATCCCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SEGFDTNEEQEESTYHTVFLEIP*DLDPLE Trigger: CTCCAGGGGATCCAGGTCCAAAGGGATTTCAAGGAA...AACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCTGTGTTCTAAAGTTACACAGCTGAGTTCAGATCCCAGTCCTTCCACCACAAATATTTCCACGTaGGAGTCATTGGCATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSLCSKVTQLSSDPSPSTTNIST*ESLASF Trigger: GAAGGATGCCAATGACTCCAACGTGGAAATATTTGT...GGTGGAAGGACTGGGATCTGAACTCAGCTGTGTAACTTTAGAACACAGACTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | GAGTATTCAGACATATTTCTACCATCACTTTGGGCTAAATTCTTAACTCTCCTCTGGCTTCAGGTGGGGTaGGGATGGCCAAGATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: EYSDIFLPSLWAKFLTLLWLQVG*GWPRYQ Trigger: CTGGTATCTTGGCCATCCCAACCCCACCTGAAGCCA...GAGGAGAGTTAAGAATTTAGCCCAAAGTGATGGTAGAAATATGTCTGAATACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS TCA 90 bp | CACAAAACTTTGGATGATCTGAAAGTTCTCTGGTCCCACACTTTCTaGACTGTCAATCACAAACACCAACTCCAGTGGAGTCTCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HKTLDDLKVLWSHTF*TVNHKHQLQWSLFA Trigger: TGCAAAGAGACTCCACTGGAGTTGGTGTTTGTGATTGACAGTTCAGAAAGTGTGGGACCAGAGAACTTTCAGATCATCCAAAGTTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | TCAGACTGTATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTTGTCCATACACTGCTaGAGTCATAAAAGCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SDCIPRRWSMPFMKVCTQLSIHC*SHKSWQ Trigger: TTGCCAGCTTTTATGACTCAAGCAGTGTATGGACAA...CTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGATACAGTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGGCTTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTACGAAGTTTGGCTTCATaGACCACAGTGGAAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VKALTPMRNRKSQLIILLRSLAS*TTVESP Trigger: TGGACTTTCCACTGTGGTCAATGAAGCCAAACTTCG...TAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAAGCCTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCAGTGTATGCTCAGATGGATATCAAACGAAGTTaGGCTTCATTGACCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RWSMPFMKVCTQSVYAQMDIKRS*ASLTTV Trigger: CACTGTGGTCAATGAAGCCAAACTTCGTTTGATATC...CATCTGAGCATACACTGACTGAGTACAGACCTTCATAAATGGCATAGACCACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | TCACCATCCTTCACCACTACCCCAGCATTCACATGTAGACATTCCTACAGTGTTGTAACAAATTGGGATTaGGAGTTCTTGTTTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSFTTTPAFTCRHSYSVVTNWD*EFLFPL Trigger: GAGTGGAAACAAGAACTCCAAATCCCAATTTGTTAC...AACACTGTAGGAATGTCTACATGTGAATGCTGGGGTAGTGGTGAAGGATGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | GTATGCTCAGATGTGGTGCACTGTTTGTATCACACTCTCTCTAAACCTCTGATCTTCTGTCTACAAGTGTaGGGTCACTCAATAGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VCSDVVHCLYHTLSKPLIFCLQV*GHSIVE Trigger: TTCTACTATTGAGTGACCCAACACTTGTAGACAGAA...GATCAGAGGTTTAGAGAGAGTGTGATACAAACAGTGCACCACATCTGAGCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | TCAGACTGTATCCCTAGAAGGTGGTCTATGCCATTTATGAAGGTCTGTACTCAGTCACATTCACAGATCTaGTGTTCACACTTCCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDCIPRRWSMPFMKVCTQSHSQI*CSHFLS Trigger: TGAAAGGAAGTGTGAACACAAGATCTGTGAATGTGA...CTGAGTACAGACCTTCATAAATGGCATAGACCACCTTCTAGGGATACAGTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | CCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACAAGCTTGAAGTCATCCTaGCTGGAAAACTGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PMRNRKSQLIILLVSIQTSLKSS*LENCFR Trigger: CCTGAAGCAGTTTTCCAGCAAGGATGACTTCAAGCT...TGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | TTTGACACCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATCCCAGATACTGCATGTaGTCTACCACCAGCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FDTNEEQEESTYHTVSEYPRYCM*STTSLK Trigger: CTTCAAGCTGGTGGTAGACAACATGCAGTATCTGGG...ATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGGTGTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS TCA 90 bp | TGTGAAAAATTTCAAAGTTGGGGTCATCCTTCTTCACCACTCCAATaGCAAATATTTCCACGTTGGAGTCATTGGCATCCTTCACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: CEKFQSWGHPSSPLQ*QIFPRWSHWHPSPH Trigger: ATGTGGTGAAGGATGCCAATGACTCCAACGTGGAAATATTTGTCATTGGAGTGGTGAAGAAGGATGACCCCAACTTTGAAATTTTTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACATATTTCTCACCCTTATTTCCTaGAAATCCCTTTGGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EEQEESTYHTVSEYSDIFLTLIS*KSLWTW Trigger: CCAGGTCCAAAGGGATTTCAAGGAAATAAGGGTGAG...AAATATGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS-3UTR CAA 90 bp | CCAATGAGGAACAGGAAGAGTCAACTTATCATACTGTTAGTGAGTATTCAGACAATTAAATTCAGAGACTaGACCCGCTGCTTAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: PMRNRKSQLIILLVSIQTIKFRD*TRCLNV Trigger: GACATTTAAGCAGCGGGTCAAGTCTCTGAATTTAAT...TGTCTGAATACTCACTAACAGTATGATAAGTTGACTCTTCCTGTTCCTCATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS TCA 90 bp | AAGTTTGGCTTCATTGACCACAGTGGAAAGTCCAACGGTGATAAATaGTATTCCCAAAATTCTAGCATCTTCAGAAATACTTTGGACATC | + |
|
Preference number: 5 (lower is better) Translates to: KFGFIDHSGKSNGDK*YSQNSSIFRNTLDI Trigger: GATGTCCAAAGTATTTCTGAAGATGCTAGAATTTTGGGAATATCATTTATCACCGTTGGACTTTCCACTGTGGTCAATGAAGCCAAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
||
| CDS-3UTR CAA 90 bp | GAGTATTCAGACATATTTCTACCATCACTTTGGGCTAAATTCTTAACTCTCCTCAGTCTTCACAAAACTTaGGATGATCTGAAAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EYSDIFLPSLWAKFLTLLSLHKT*DDLKVL Trigger: GAGAACTTTCAGATCATCCAAAGTTTTGTGAAGACT...GAGGAGAGTTAAGAATTTAGCCCAAAGTGATGGTAGAAATATGTCTGAATACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS TCA 90 bp | CACAAAATCTTTCTGATTATCAAAGAGTACAATTTTGGAGCTTTCTaGGCTGTCCAAGATAAAGACAACATCTATGAAGCAAATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: HKIFLIIKEYNFGAF*AVQDKDNIYEANGI Trigger: GATGCCATTTGCTTCATAGATGTTGTCTTTATCTTGGACAGCTCAGAAAGCTCCAAAATTGTACTCTTTGATAATCAGAAAGATTTTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
||
| CDS GCA 72 bp | ATGGACCTTGGATCCCCTGCTCGCCTTGGCTTCCGATaGCAGGAATTCCCGCTGGCCCCTGCGGTCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: MDLGSPARLGFR*QEFPLAPAVPQ Trigger: CTGTGGGACCGCAGGGGCCAGCGGGAATTCCTGGCATCGGAAGCCAAGGCGAGCAGGGGATCCAAGGTCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CCA 72 bp | CTGCTCGCCTTGGCTTCCGATGCCAGGAATTCCCGCTaGCCCCTGCGGTCCCACAGGTCCCAAATCCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLALASDARNSR*PLRSHRSQIPL Trigger: AAGGGGGATTTGGGACCTGTGGGACCGCAGGGGCCAGCGGGAATTCCTGGCATCGGAAGCCAAGGCGAGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 90 bp | TTGAGGACCAGGTGGACCAGATGGACCTTGGATCCCCTGCTCGCCTaGGCTTCCGATGCCAGGAATTCCCGCTGGCCCCTGCGGTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRTRWTRWTLDPLLA*ASDARNSRWPLRSH Trigger: GTGGGACCGCAGGGGCCAGCGGGAATTCCTGGCATCGGAAGCCAAGGCGAGCAGGGGATCCAAGGTCCATCTGGTCCACCTGGTCCTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CCA 72 bp | AGGATAGCCATCACCTTTGAGTCCTGGAGCCCCCACTaGTCCTCGGGGACCCTGGGCACCCTTTGGTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RIAITFESWSPH*SSGTLGTLWSS Trigger: CGAGGACCAAAGGGTGCCCAGGGTCCCCGAGGACCAGTGGGGGCTCCAGGACTCAAAGGTGATGGCTATCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 72 bp | AGGTGGACCAGATGGACCTTGGATCCCCTGCTCGCCTaGGCTTCCGATGCCAGGAATTCCCGCTGGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RWTRWTLDPLLA*ASDARNSRWPL Trigger: CAGGGGCCAGCGGGAATTCCTGGCATCGGAAGCCAAGGCGAGCAGGGGATCCAAGGTCCATCTGGTCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 90 bp | CTGGTTCTCCCTTTGCTCCAGTGTCTCCCACACCACGTAAGCCCATaGGTCCAGGGGGTCCTGGCAATCCTCGCGGTCCAGCCACACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LVLPLLQCLPHHVSP*VQGVLAILAVQPHQ Trigger: CTGGTGTGGCTGGACCGCGAGGATTGCCAGGACCCCCTGGACCAATGGGCTTACGTGGTGTGGGAGACACTGGAGCAAAGGGAGAACCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 72 bp | CCTTTGCTCCAGTGTCTCCCACACCACGTAAGCCCATaGGTCCAGGGGGTCCTGGCAATCCTCGCGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLQCLPHHVSP*VQGVLAILAVQ Trigger: CTGGACCGCGAGGATTGCCAGGACCCCCTGGACCAATGGGCTTACGTGGTGTGGGAGACACTGGAGCAAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS GCA 72 bp | GCTCTCCCTTCTGACCAGGGAGGCCAAGGCCCACTGTaGCCTTTGACCCTGGGAAACCTTGAGGTCCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALPSDQGGQGPL*PLTLGNLEVLA Trigger: AGCAAGGACCTCAAGGTTTCCCAGGGTCAAAGGGCACAGTGGGCCTTGGCCTCCCTGGTCAGAAGGGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 90 bp | CCTTGGGGCCGGGCTGTCCTTTCCCAGGCATTCCTTCTGGGCCTCTaGTTCCTGGAAGTCCAGCTTCTCCCTTCTTTCCAGAGGCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PWGRAVLSQAFLLGL*FLEVQLLPSFQRPH Trigger: ATGGGGCCTCTGGAAAGAAGGGAGAAGCTGGACTTCCAGGAACAAGAGGCCCAGAAGGAATGCCTGGGAAAGGACAGCCCGGCCCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS TCA 72 bp | CTTCTGACCAGGGAGGCCAAGGCCCACTGTGCCCTTTaGCCCTGGGAAACCTTGAGGTCCTTGCTCCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLTREAKAHCAL*PWETLRSLLPF Trigger: AAAGGGGAGCAAGGACCTCAAGGTTTCCCAGGGTCAAAGGGCACAGTGGGCCTTGGCCTCCCTGGTCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CCA 72 bp | TGGCTCCCCCTTTGGACCCTGTACTCCAATGCCCATTaGTCCTCTAGGCCCTGTGGGTCCCATCTGACCTAC | + |
|
Preference number: 6 (lower is better) Translates to: WLPLWTLYSNAH*SSRPCGSHLTY Trigger: GTAGGTCAGATGGGACCCACAGGGCCTAGAGGACCAATGGGCATTGGAGTACAGGGTCCAAAGGGGGAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 90 bp | GGGAGCTCCCATTCTTCCTTCCTGGCCCCTCTCACCCTTAACACCTaGCTGTCCAATACCAGGGGCTCCTGGAGGACCATAAGGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSHSSFLAPLTLNT*LSNTRGSWRTIRTR Trigger: CCTGGTCCTTATGGTCCTCCAGGAGCCCCTGGTATTGGACAGCAAGGTGTTAAGGGTGAGAGGGGCCAGGAAGGAAGAATGGGAGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 90 bp | TGGCTCTCCCTTTGGCCCTTCGGGTCCTGGAAACCCCCTCTGTCCTaGATTTCCTTTGCTCCCTTTCTTTCCTTCATCACCCTTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WLSLWPFGSWKPPLS*ISFAPFLSFITLGA Trigger: GGCCCCAAGGGTGATGAAGGAAAGAAAGGGAGCAAAGGAAATCAAGGACAGAGGGGGTTTCCAGGACCCGAAGGGCCAAAGGGAGAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS TCA 72 bp | ATGCCCATTGGTCCTCTAGGCCCTGTGGGTCCCATCTaGCCTACTTCTCCCTTAGGACCAGGTGAGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: MPIGPLGPVGPI*PTSPLGPGEPC Trigger: ACAAGGCTCACCTGGTCCTAAGGGAGAAGTAGGTCAGATGGGACCCACAGGGCCTAGAGGACCAATGGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CCA 72 bp | AGGACCTGGCTCACCCTTATTTCCTTGAAATCCCTTTaGACCTGGATCCCCTGGAGGTCCACCAATGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RTWLTLISLKSL*TWIPWRSTNAL Trigger: CAGGGCATTGGTGGACCTCCAGGGGATCCAGGTCCAAAGGGATTTCAAGGAAATAAGGGTGAGCCAGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 72 bp | GATCCCCTGGAGGTCCACCAATGCCCTGAATTCCTCTaGGTCCCTTTGGTCCATATGGCCCTTCAGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: DPLEVHQCPEFL*VPLVHMALQVL Trigger: AAGGACCTGAAGGGCCATATGGACCAAAGGGACCAAGAGGAATTCAGGGCATTGGTGGACCTCCAGGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 72 bp | GAGGACCTGGCTCACCCTTATTTCCTTGAAATCCCTTaGGACCTGGATCCCCTGGAGGTCCACCAATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EDLAHPYFLEIP*DLDPLEVHQCP Trigger: AGGGCATTGGTGGACCTCCAGGGGATCCAGGTCCAAAGGGATTTCAAGGAAATAAGGGTGAGCCAGGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 72 bp | CATTCTTCCTTCCTGGCCCCTCTCACCCTTAACACCTaGCTGTCCAATACCAGGGGCTCCTGGAGGACCATA | + |
|
Preference number: 6 (lower is better) Translates to: HSSFLAPLTLNT*LSNTRGSWRTI Trigger: TATGGTCCTCCAGGAGCCCCTGGTATTGGACAGCAAGGTGTTAAGGGTGAGAGGGGCCAGGAAGGAAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS TCA 72 bp | CCAAGGCCCACTGTGCCCTTTGACCCTGGGAAACCTTaGGGTCCTTGCTCCCCTTTAATTCCTTGTGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRPTVPFDPGKP*GPCSPLIPCDP Trigger: TGGATCACAAGGAATTAAAGGGGAGCAAGGACCTCAAGGTTTCCCAGGGTCAAAGGGCACAGTGGGCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CCA 72 bp | TGGCTCACCCTTATTTCCTTGAAATCCCTTTGGACCTaGATCCCCTGGAGGTCCACCAATGCCCTGAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: WLTLISLKSLWT*IPWRSTNALNS Trigger: GGAATTCAGGGCATTGGTGGACCTCCAGGGGATCCAGGTCCAAAGGGATTTCAAGGAAATAAGGGTGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 72 bp | ACTCCTTCACGGCTGCTGAGTAATGGCTCAAGTGTATaGGTGGCTTCAGGTGGGGTTGGGATGGCCAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: TPSRLLSNGSSV*VASGGVGMAKI Trigger: TATCTTGGCCATCCCAACCCCACCTGAAGCCACCAATACACTTGAGCCATTACTCAGCAGCCGTGAAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CCA 72 bp | CTTATTTCCTTGAAATCCCTTTGGACCTGGATCCCCTaGAGGTCCACCAATGCCCTGAATTCCTCTTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LISLKSLWTWIP*RSTNALNSSWS Trigger: GGACCAAGAGGAATTCAGGGCATTGGTGGACCTCCAGGGGATCCAGGTCCAAAGGGATTTCAAGGAAATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CCA 72 bp | GCTCAAGTGTATTGGTGGCTTCAGGTGGGGTTGGGATaGCCAAGATACCAGCCTCAGTCAACACATACGATT | + |
|
Preference number: 6 (lower is better) Translates to: AQVYWWLQVGLG*PRYQPQSTHTI Trigger: AATCGTATGTGTTGACTGAGGCTGGTATCTTGGCCATCCCAACCCCACCTGAAGCCACCAATACACTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 72 bp | GTAATGGCTCAAGTGTATTGGTGGCTTCAGGTGGGGTaGGGATGGCCAAGATACCAGCCTCAGTCAACACAT | + |
|
Preference number: 6 (lower is better) Translates to: VMAQVYWWLQVG*GWPRYQPQSTH Trigger: ATGTGTTGACTGAGGCTGGTATCTTGGCCATCCCAACCCCACCTGAAGCCACCAATACACTTGAGCCATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS GCA 72 bp | CGTGATCACCAAGGCCACCTTCTTTACACCTGGCCTTaGCTCTTTGAACATGTCATTAGCTGCTTGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RDHQGHLLYTWP*LFEHVISCLKS Trigger: GCTCTTCAAGCAGCTAATGACATGTTCAAAGAGGCAAGGCCAGGTGTAAAGAAGGTGGCCTTGGTGATCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CCA 72 bp | AGTTTCTCCTTTCTGAGCATCACCCGGGTTTCCTTTTaGTCCTCGCTCACCTTTGATACCAGGGTTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SFSFLSITRVSF*SSLTFDTRVSM Trigger: CATGGAAACCCTGGTATCAAAGGTGAGCGAGGACCAAAAGGAAACCCGGGTGATGCTCAGAAAGGAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 72 bp | GGGTCACCTGGCTCGCCCTTTTCACATTCACAGATCTaGTGTTCACACTTCCTTTCAAACAAGACACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPGSPFSHSQI*CSHFLSNKTPR Trigger: CCTGGGTGTCTTGTTTGAAAGGAAGTGTGAACACAAGATCTGTGAATGTGAAAAGGGCGAGCCAGGTGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS GCA 72 bp | AAATACTTTGGACATCTGGGCTCTTGGGATGATCGATaGCATCAGTCATCAGCAAAGCCACCTTCACGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: KYFGHLGSWDDR*HQSSAKPPSRH Trigger: ATGGCGTGAAGGTGGCTTTGCTGATGACTGATGGCATCGATCATCCCAAGAGCCCAGATGTCCAAAGTATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
||
| CDS GCA 72 bp | TTCCACGTTGGAGTCATTGGCATCCTTCACCACATCTaGCAGCTTCTTTTTATCTCGGGAATCTGTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FHVGVIGILHHI*QLLFISGICLS Trigger: GGACAGACAGATTCCCGAGATAAAAAGAAGCTGGCAGATGTGGTGAAGGATGCCAATGACTCCAACGTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS CAA 90 bp | TCGCCACATTCCCCGGGCTTCAGGGCTTCCTCGCATCTTGGATCTTaGTACAGAGATTTTTCTGACTGTAACAAATTGGGATTTGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPHSPGFRASSHLGS*YRDFSDCNKLGFGV Trigger: AACTCCAAATCCCAATTTGTTACAGTCAGAAAAATCTCTGTACAAAGATCCAAGATGCGAGGAAGCCCTGAAGCCCGGGGAATGTGGCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
||
| CDS TCA 72 bp | TCTTCAGAAATACTTTGGACATCTGGGCTCTTGGGATaGTCGATGCCATCAGTCATCAGCAAAGCCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSEILWTSGLLG*SMPSVISKATF Trigger: GAAGGTGGCTTTGCTGATGACTGATGGCATCGATCATCCCAAGAGCCCAGATGTCCAAAGTATTTCTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
||
| CDS CAA 72 bp | GGTTCATTGGAAGGATCCCCAGATATCAAACGAAGTTaGGCTTCATTGACCACAGTGGAAAGTCCAACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSLEGSPDIKRS*ASLTTVESPTV Trigger: CACCGTTGGACTTTCCACTGTGGTCAATGAAGCCAAACTTCGTTTGATATCTGGGGATCCTTCCAATGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS CAA 72 bp | TCCTTCTTCACCACTCCAATGACAAATATTTCCACGTaGGAGTCATTGGCATCCTTCACCACATCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SFFTTPMTNIST*ESLASFTTSAS Trigger: GCTGGCAGATGTGGTGAAGGATGCCAATGACTCCAACGTGGAAATATTTGTCATTGGAGTGGTGAAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CAA 72 bp | CATTCTTTTTCACTGTGGAATCTGTTTCCTGAGCCATaGCAGCCACTGAACCAAAAGCGAGCGCAAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: HSFSLWNLFPEP*QPLNQKRAQEL Trigger: CAACTCTTGCGCTCGCTTTTGGTTCAGTGGCTGCAATGGCTCAGGAAACAGATTCCACAGTGAAAAAGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS TCA 72 bp | GACAAGGGTGGATCAATCTGGACCGAGCTGCTAAACTaGAGGGCTGCCAGCTTGATGTCATATTTTAATGAA | + |
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Preference number: 6 (lower is better) Translates to: DKGGSIWTELLN*RAASLMSYFNE Trigger: TTCATTAAAATATGACATCAAGCTGGCAGCCCTTCAGTTTAGCAGCTCGGTCCAGATTGATCCACCCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS GCA 72 bp | GTACCTTGCCCAATTAAATTCAGAGACTTGACCCGCTaGTTAAATGTCCGGAGATCCTTCCAAGAAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: VPCPIKFRDLTR*LNVRRSFQEDK Trigger: CTTGTCTTCTTGGAAGGATCTCCGGACATTTAAGCAGCGGGTCAAGTCTCTGAATTTAATTGGGCAAGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS CAA 90 bp | TCCTTCTTCACCACTCCAATGACAAATATTTCCACGTTGGAGTCATaGGCATCCTTCACCACATCTGCCAGCTTCTTTTTATCTCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SFFTTPMTNISTLES*ASFTTSASFFLSRE Trigger: TTCCCGAGATAAAAAGAAGCTGGCAGATGTGGTGAAGGATGCCAATGACTCCAACGTGGAAATATTTGTCATTGGAGTGGTGAAGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CAA 90 bp | TTGGGGTCATCCTTCTTCACCACTCCAATGACAAATATTTCCACGTaGGAGTCATTGGCATCCTTCACCACATCTGCCAGCTTCTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LGSSFFTTPMTNIST*ESLASFTTSASFFL Trigger: TAAAAAGAAGCTGGCAGATGTGGTGAAGGATGCCAATGACTCCAACGTGGAAATATTTGTCATTGGAGTGGTGAAGAAGGATGACCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CCA 72 bp | CAAGTGTTGGGTCACTCAATAGTAGAACGGGTTCATTaGAAGGATCCCCAGATATCAAACGAAGTTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: QVLGHSIVERVH*KDPQISNEVWL Trigger: AAGCCAAACTTCGTTTGATATCTGGGGATCCTTCCAATGAACCCGTTCTACTATTGAGTGACCCAACACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS CAA 72 bp | ACAAGTGTTGGGTCACTCAATAGTAGAACGGGTTCATaGGAAGGATCCCCAGATATCAAACGAAGTTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: TSVGSLNSRTGS*EGSPDIKRSLA Trigger: AGCCAAACTTCGTTTGATATCTGGGGATCCTTCCAATGAACCCGTTCTACTATTGAGTGACCCAACACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS CAA 90 bp | AGTAGAACGGGTTCATTGGAAGGATCCCCAGATATCAAACGAAGTTaGGCTTCATTGACCACAGTGGAAAGTCCAACGGTGATAAATGAT | + |
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Preference number: 6 (lower is better) Translates to: SRTGSLEGSPDIKRS*ASLTTVESPTVIND Trigger: ATCATTTATCACCGTTGGACTTTCCACTGTGGTCAATGAAGCCAAACTTCGTTTGATATCTGGGGATCCTTCCAATGAACCCGTTCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS CAA 90 bp | ATTCTGTCTACAAGTGTTGGGTCACTCAATAGTAGAACGGGTTCATaGGAAGGATCCCCAGATATCAAACGAAGTTTGGCTTCATTGACC | + |
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Preference number: 6 (lower is better) Translates to: ILSTSVGSLNSRTGS*EGSPDIKRSLASLT Trigger: GGTCAATGAAGCCAAACTTCGTTTGATATCTGGGGATCCTTCCAATGAACCCGTTCTACTATTGAGTGACCCAACACTTGTAGACAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS TCA 72 bp | TTTCAAAGTTGGGGTCATCCTTCTTCACCACTCCAATaGCAAATATTTCCACGTTGGAGTCATTGGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: FQSWGHPSSPLQ*QIFPRWSHWHP Trigger: AGGATGCCAATGACTCCAACGTGGAAATATTTGTCATTGGAGTGGTGAAGAAGGATGACCCCAACTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CAA 72 bp | GAAGGATCCCCAGATATCAAACGAAGTTTGGCTTCATaGACCACAGTGGAAAGTCCAACGGTGATAAATGAT | + |
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Preference number: 6 (lower is better) Translates to: EGSPDIKRSLAS*TTVESPTVIND Trigger: ATCATTTATCACCGTTGGACTTTCCACTGTGGTCAATGAAGCCAAACTTCGTTTGATATCTGGGGATCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS CAA 72 bp | ACCACTCCAATGACAAATATTTCCACGTTGGAGTCATaGGCATCCTTCACCACATCTGCCAGCTTCTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: TTPMTNISTLES*ASFTTSASFFL Trigger: TAAAAAGAAGCTGGCAGATGTGGTGAAGGATGCCAATGACTCCAACGTGGAAATATTTGTCATTGGAGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CAA 90 bp | GGTTCATTGGAAGGATCCCCAGATATCAAACGAAGTTTGGCTTCATaGACCACAGTGGAAAGTCCAACGGTGATAAATGATATTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GSLEGSPDIKRSLAS*TTVESPTVINDIPK Trigger: TTTGGGAATATCATTTATCACCGTTGGACTTTCCACTGTGGTCAATGAAGCCAAACTTCGTTTGATATCTGGGGATCCTTCCAATGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS CAA 90 bp | TCGCATCTTGGATCTTTGTACAGAGATTTTTCTGACTGTAACAAATaGGGATTTGGAGTTCTTGTTTCCACTCCTTCACGGCTGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SHLGSLYRDFSDCNK*GFGVLVSTPSRLLS Trigger: ACTCAGCAGCCGTGAAGGAGTGGAAACAAGAACTCCAAATCCCAATTTGTTACAGTCAGAAAAATCTCTGTACAAAGATCCAAGATGCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CAA 90 bp | CTTTCTGAACTGTCAATCACAAACACCAACTCCAGTGGAGTCTCTTaGCATTTGGGCCCACAACCACATATTTCAATGATAAGTTTGATA | + |
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Preference number: 6 (lower is better) Translates to: LSELSITNTNSSGVS*HLGPQPHISMISLI Trigger: TATCAAACTTATCATTGAAATATGTGGTTGTGGGCCCAAATGCAAAGAGACTCCACTGGAGTTGGTGTTTGTGATTGACAGTTCAGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS CAA 72 bp | GGATCTTTGTACAGAGATTTTTCTGACTGTAACAAATaGGGATTTGGAGTTCTTGTTTCCACTCCTTCACGG | + |
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Preference number: 6 (lower is better) Translates to: GSLYRDFSDCNK*GFGVLVSTPSR Trigger: CCGTGAAGGAGTGGAAACAAGAACTCCAAATCCCAATTTGTTACAGTCAGAAAAATCTCTGTACAAAGATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115537.2 |
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| CDS TCA 72 bp | TTCATTGACCACAGTGGAAAGTCCAACGGTGATAAATaGTATTCCCAAAATTCTAGCATCTTCAGAAATACT | + |
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Preference number: 6 (lower is better) Translates to: FIDHSGKSNGDK*YSQNSSIFRNT Trigger: AGTATTTCTGAAGATGCTAGAATTTTGGGAATATCATTTATCACCGTTGGACTTTCCACTGTGGTCAATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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| CDS TCA 72 bp | TTTCTGATTATCAAAGAGTACAATTTTGGAGCTTTCTaGGCTGTCCAAGATAAAGACAACATCTATGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: FLIIKEYNFGAF*AVQDKDNIYEA Trigger: TGCTTCATAGATGTTGTCTTTATCTTGGACAGCTCAGAAAGCTCCAAAATTGTACTCTTTGATAATCAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115537.2 ENSMUST00000213284.2 |
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