Pregenerated sensors for COL26A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004415Ensembl transcript IDs: ENSMUST00000057497.13, ENSMUST00000111103.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCCTGATGTCTTTCCAGGTGGCCCTGCCTCCCGGCAGCCCAGCTaGCTCAGGAATCCTCTGGGCCACACACCTCAGGGTCATGGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: CPDVFPGGPASRQPS*LRNPLGHTPQGHGF Trigger: GAAGCCATGACCCTGAGGTGTGTGGCCCAGAGGATTCCTGAGGCAGCTGGGCTGCCGGGAGGCAGGGCCACCTGGAAAGACATCAGGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR TCA 90 bp | CCCAGGGACCCCAGGCTCCCAATGTCCTCCACAATGGTCCCTGCTTaGTGCCCAGTCCCACATGGGGAGTCTTCAGGATGCACCCGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: PRDPRLPMSSTMVPA*CPVPHGESSGCTRC Trigger: ACAGCGGGTGCATCCTGAAGACTCCCCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAGGACATTGGGAGCCTGGGGTCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR TCA 90 bp | CAGAGACCCTCCTCCCTCACAGTCCCAAACTCCCCTCTTGGAAGCTaGCCCCTACCCGCAGCCCTAAGGAAGACCAGAGGAAGAGAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: QRPSSLTVPNSPLGS*PLPAALRKTRGREA Trigger: TGCCTCTCTTCCTCTGGTCTTCCTTAGGGCTGCGGGTAGGGGTCAGCTTCCAAGAGGGGAGTTTGGGACTGTGAGGGAGGAGGGTCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR CCA 90 bp | TCATTCTCAGAGACCCTCCTCCCTCACAGTCCCAAACTCCCCTCTTaGAAGCTGACCCCTACCCGCAGCCCTAAGGAAGACCAGAGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: SFSETLLPHSPKLPS*KLTPTRSPKEDQRK Trigger: CTTCCTCTGGTCTTCCTTAGGGCTGCGGGTAGGGGTCAGCTTCCAAGAGGGGAGTTTGGGACTGTGAGGGAGGAGGGTCTCTGAGAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR GCA 90 bp | ACTCAGAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTaGATAAGCACCAAGAACTTTAGGGATGGTCACTCCTGCTGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: TQREPTGPSGVRSQP*ISTKNFRDGHSCWA Trigger: TGCCCAGCAGGAGTGACCATCCCTAAAGTTCTTGGTGCTTATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR CCA 90 bp | TTTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTaGTGTTTTCTGTTCTCTGAGTGTCAGGGCCATTGGCCCAGTTAT | + |
|
Preference number: 1 (lower is better) Translates to: FRDGHSCWAGRHTRG*CFLFSECQGHWPSY Trigger: ATAACTGGGCCAATGGCCCTGACACTCAGAGAACAGAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR GCA 90 bp | TCACAGCCTTGCATAAGCACCAAGAACTTTAGGGATGGTCACTCCTaGTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCTGTTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: SQPCISTKNFRDGHS*WAGRHTRGWCFLFS Trigger: AGAGAACAGAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAAAGTTCTTGGTGCTTATGCAAGGCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR TCA 90 bp | CCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGAGTGGGAGGTAACAATGGTCCCTGCTTaGTGCCCAGTCCCACATGGG | + |
|
Preference number: 2 (lower is better) Translates to: PPSSPSLPRPRLQREWEVTMVPA*CPVPHG Trigger: CCCATGTGGGACTGGGCATCAAGCAGGGACCATTGT...TACCTCCCACTCCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGGCAGCCCAGCTGCCTCAGGAATCCTCTGGGCCACACACCTCAGGGTCATGGTGCTAGTCAGCACTaGGCCCTGCCCTTGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SRQPSCLRNPLGHTPQGHGASQH*ALPLEA Trigger: TGCTTCCAAGGGCAGGGCCCAGTGCTGACTAGCACC...ATGACCCTGAGGTGTGTGGCCCAGAGGATTCCTGAGGCAGCTGGGCTGCCGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAAGAACTTTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTCGTCTCCAGCGGGAGTaGGAGGTAGGGGGCAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PRTLGMVTPAGQGDIPEGRLQRE*EVGGRG Trigger: GCCCCTGCCCCCTACCTCCCACTCCCGCTGGAGACG...ACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAAAGTTCTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATAAGCACCAACATCGGTCCCCAGGCTaGGTGGGGAGCACAGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: ERAYRAQWGQVTALHKHQHRSPG*VGSTDL Trigger: TAGGTCTGTGCTCCCCACTCAGCCTGGGGACCGATG...TTGGTGCTTATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCCTCTTGGAAGCTGACCCCTACCCGCAGCCCTAAGGAAGACCAGAGGAAGACTGGGCCCTGCCCTTaGAAGCACCATCTCTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LPSWKLTPTRSPKEDQRKTGPCP*KHHLSP Trigger: TGGGGAGAGATGGTGCTTCCAAGGGCAGGGCCCAGT...CTTCCTCTGGTCTTCCTTAGGGCTGCGGGTAGGGGTCAGCTTCCAAGAGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR TCA 90 bp | GGACCAGTAGGCTCAGCAAGACTGGGAGACATTAGGGGGCATCGCCAAAGCTCTCATCGGTCCCCAGGCTaGGTGGGGAGCACAGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: GPVGSARLGDIRGHRQSSHRSPG*VGSTDL Trigger: TAGGTCTGTGCTCCCCACTCAGCCTGGGGACCGATG...AGAGCTTTGGCGATGCCCCCTAATGTCTCCCAGTCTTGCTGAGCCTACTGGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATAAGCACCAAACTGGGCCCTGCCCTTaGAAGCACCATCTCTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: ERAYRAQWGQVTALHKHQTGPCP*KHHLSP Trigger: TGGGGAGAGATGGTGCTTCCAAGGGCAGGGCCCAGT...TTGGTGCTTATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGGCCTCAGGAATCCTCTaGGCCACACACCTCAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQASGIL*ATHLRV Trigger: GACCCTGAGGTGTGTGGCCCAGAGGATTCCTGAGGC...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCGGTGCTAGTCAGCACTaGGCCCTGCCCTTGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LGMVTPAGQGDIPEGGVFGASQH*ALPLEA Trigger: TGCTTCCAAGGGCAGGGCCCAGTGCTGACTAGCACC...GAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCGTCATGTGTACCATGTaGACATCGGTCCCCAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: REAFRAVGQFFCVTCLDPVMCTM*TSVPRL Trigger: CAGCCTGGGGACCGATGTGCACATGGTACACATGAC...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCATTCTGGATGGATGGTCTCATTAAATGGTCCTTCCTTCTCCATGGGGGACTTTCCAGGTGGCCCTaGCTCCCGGCAGCCCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VPFWMDGLIKWSFLLHGGLSRWP*LPAAQL Trigger: CAGCTGGGCTGCCGGGAGGCAGGGCCACCTGGAAAG...TCCCCCATGGAGAAGGAAGGACCATTTAATGAGACCATCCATCCAGAATGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAACTCAGAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATAGTCATGTGTACCATGTaGACATCGGTCCCCAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ITQREPTGPSGVRSQPCIVMCTM*TSVPRL Trigger: CAGCCTGGGGACCGATGTGCACATGGTACACATGAC...TATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTCTGAGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCTGTTCTCTGTTCTTCTGTGTAACCTaGCTGGACCCCAGCCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: VTPAGQGDIPEGGVFCSLFFCVT*LDPSLK Trigger: CTTGAGGCTGGGGTCCAGGCAGGTTACACAGAAGAA...CAGAGAACAGAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCTTCTTCTGTGTAACCTaGCTGGACCCCAGCCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LGMVTPAGQGDIPEGGVFFFCVT*LDPSLK Trigger: CTTGAGGCTGGGGTCCAGGCAGGTTACACAGAAGAA...GAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAGTGGCCATGATGGAGGTTGTAGGTCCCATTCTGGATGGATGGTCTCATGGTCCCCAGGCTGAGTaGGGAGCACAGACCTACCTT | + |
|
Preference number: 2 (lower is better) Translates to: ERVAMMEVVGPILDGWSHGPQAE*GAQTYL Trigger: AAGGTAGGTCTGTGCTCCCCACTCAGCCTGGGGACC...ATGAGACCATCCATCCAGAATGGGACCTACAACCTCCATCATGGCCACTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCTGTTCTCTGGGATATAGATATTCATaGAAGAGTGGCCATGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: VTPAGQGDIPEGGVFCSLGYRYS*KSGHDG Trigger: TCCATCATGGCCACTCTTTCATGAATATCTATATCC...CAGAGAACAGAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCACCTAGCCCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGCACTGGGCCCTGCCCTaGGAAGCACCATCTCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LHLAHPAHPAYPDPVSSGHWALP*EAPSLP Trigger: GGGGAGAGATGGTGCTTCCAAGGGCAGGGCCCAGTG...CCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGGGCTAGGTGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR GCA 72 bp | GCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTaGCTGGACCCCAGCCTCAAGGTGTGTGGCCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: AFRAVGQFFCVT*LDPSLKVCGHG Trigger: GCCGTGGCCACACACCTTGAGGCTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCCTCTTGGAAGCTGACCCCTACCCGCAGCCCTAAGGAAGACCAGAGGAAGCACTGGGCCCTGCCCTaGGAAGCACCATCTCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPSWKLTPTRSPKEDQRKHWALP*EAPSLP Trigger: GGGGAGAGATGGTGCTTCCAAGGGCAGGGCCCAGTG...CTTCCTCTGGTCTTCCTTAGGGCTGCGGGTAGGGGTCAGCTTCCAAGAGGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR CCA 72 bp | CTGCCTCCCGGCAGCCCAGCTGCCTCAGGAATCCTCTaGGCCACACACCTCAGGGTCATGGCTTCAACAACA | + |
|
Preference number: 3 (lower is better) Translates to: LPPGSPAASGIL*ATHLRVMASTT Trigger: TGTTGTTGAAGCCATGACCCTGAGGTGTGTGGCCCAGAGGATTCCTGAGGCAGCTGGGCTGCCGGGAGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR CCA 72 bp | GAGACCCTCCTCCCTCACAGTCCCAAACTCCCCTCTTaGAAGCTGACCCCTACCCGCAGCCCTAAGGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ETLLPHSPKLPS*KLTPTRSPKED Trigger: GTCTTCCTTAGGGCTGCGGGTAGGGGTCAGCTTCCAAGAGGGGAGTTTGGGACTGTGAGGGAGGAGGGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR CCA 72 bp | CTGTGTAACCTGCCTGGACCCCAGCCTCAAGGTGTGTaGCCACGGCCCCTAGCAAGCCTAGAATACAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LCNLPGPQPQGV*PRPLASLEYRQ Trigger: CTGCCTGTATTCTAGGCTTGCTAGGGGCCGTGGCCACACACCTTGAGGCTGGGGTCCAGGCAGGTTACACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCTCCCAAACTCCCCTCTaGGAAGCTGACCCCTACCCG | + |
|
Preference number: 3 (lower is better) Translates to: REAFRAVGQFFCVTCLDPSQTPL*EADPYP Trigger: CGGGTAGGGGTCAGCTTCCAAGAGGGGAGTTTGGGA...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR TCA 72 bp | CCCAGGCTCCCAATGTCCTCCACAATGGTCCCTGCTTaGTGCCCAGTCCCACATGGGGAGTCTTCAGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: PRLPMSSTMVPA*CPVPHGESSGC Trigger: GCATCCTGAAGACTCCCCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAGGACATTGGGAGCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR TCA 72 bp | GAGGAAGAGAGGCAGGCCCAAAATTTTGTAGTGCCCTaGTGTCTTTCCAGGTGGCCCTGCCTCCCGGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EEERQAQNFVVP*CLSRWPCLPAA Trigger: GGCTGCCGGGAGGCAGGGCCACCTGGAAAGACATCAGGGCACTACAAAATTTTGGGCCTGCCTCTCTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR TCA 72 bp | TCCTCCCTCACAGTCCCAAACTCCCCTCTTGGAAGCTaGCCCCTACCCGCAGCCCTAAGGAAGACCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSLTVPNSPLGS*PLPAALRKTRG Trigger: TCCTCTGGTCTTCCTTAGGGCTGCGGGTAGGGGTCAGCTTCCAAGAGGGGAGTTTGGGACTGTGAGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACCAGTAGGCTCAGCAAGACTGGGAGACATTAGGGGGCATCGCCAAAGCTCTTCCCAAACTCCCCTCTaGGAAGCTGACCCCTACCCG | + |
|
Preference number: 3 (lower is better) Translates to: GPVGSARLGDIRGHRQSSSQTPL*EADPYP Trigger: CGGGTAGGGGTCAGCTTCCAAGAGGGGAGTTTGGGA...AGAGCTTTGGCGATGCCCCCTAATGTCTCCCAGTCTTGCTGAGCCTACTGGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR CCA 72 bp | CTCCACAATGGTCCCTGCTTGATGCCCAGTCCCACATaGGGAGTCTTCAGGATGCACCCGCTGTTCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHNGPCLMPSPT*GVFRMHPLFSC Trigger: ACAGCTGAACAGCGGGTGCATCCTGAAGACTCCCCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR CCA 72 bp | GGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTaGTGTTTTCTGTTCTCTGAGTGTCAGGGCCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: GHSCWAGRHTRG*CFLFSECQGHW Trigger: CCAATGGCCCTGACACTCAGAGAACAGAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| 3UTR CCA 72 bp | AGTGGCCATGATGGAGGTTGTAGGTCCCATTCTGGATaGATGGTCTCATTAAATGGTCCTTCCTTCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SGHDGGCRSHSG*MVSLNGPSFSM Trigger: CATGGAGAAGGAAGGACCATTTAATGAGACCATCCATCCAGAATGGGACCTACAACCTCCATCATGGCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CTCCACCTAGCCCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGTGGGCCAGGAGGGCCTaGTGGACCAGGGCGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHLAHPAHPAYPDPVSSGWARRA*WTRAPH Trigger: ATGGGGCGCCCTGGTCCACCAGGCCCTCCTGGCCCA...CCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGGGCTAGGTGGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGAGTGGGAGGTATGCTCCTGGGGGTCCTaGGGGGCCGTGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSPSLPRPRLQREWEVCSWGS*GAVWSW Trigger: CCAGGACCACACGGCCCCCCAGGACCCCCAGGAGCA...TACCTCCCACTCCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGGCAGCCCAGCTGCCTCAGGAATCCTCTGGGCCACACACCTCAGGGTCATTGCTCCTGGGGGTCCTaGGGGGCCGTGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRQPSCLRNPLGHTPQGHCSWGS*GAVWSW Trigger: CCAGGACCACACGGCCCCCCAGGACCCCCAGGAGCA...ATGACCCTGAGGTGTGTGGCCCAGAGGATTCCTGAGGCAGCTGGGCTGCCGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | CTCCACCTAGCCCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGGTCTGCGCTCTTTTGTaGAGGGTCGGGGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHLAHPAHPAYPDPVSSGVCALL*RVGAQQ Trigger: CTGCTGGGCCCCGACCCTGCACAAAAGAGCGCAGAC...CCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGGGCTAGGTGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCCTCTTGGAAGCTGACCCCTACCCGCAGCCCTAAGGAAGACCAGAGGAAGGCCCTGGGATCCAGGTaGTCCTGGGGGTCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSWKLTPTRSPKEDQRKALGSR*SWGSWG Trigger: CCCCCAGGACCCCCAGGAGCACCTGGATCCCAGGGC...CTTCCTCTGGTCTTCCTTAGGGCTGCGGGTAGGGGTCAGCTTCCAAGAGGGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTCCCAATGTCCTCCACAATGGTCCCTGCTTGATGCCCAGTCCCACATGGGACTCGAGTAGCCGTTaGCGGGGGAGCCGGCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAPNVLHNGPCLMPSPTWDSSSR*RGSRRP Trigger: AGGGCGCCGGCTCCCCCGGCAACGGCTACTCGAGTC...CCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAGGACATTGGGAGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCGACTCGAGTAGCCGTTaGCGGGGGAGCCGGCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: REAFRAVGQFFCVTCLDPDSSSR*RGSRRP Trigger: AGGGCGCCGGCTCCCCCGGCAACGGCTACTCGAGTC...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | CCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGAGTGGGAGGTACCCGGGGACCTGGGATaGCAGTCAGCACTGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PPSSPSLPRPRLQREWEVPGDLG*QSALCL Trigger: TAGACACAGTGCTGACTGGCATCCCAGGTCCCCGGG...TACCTCCCACTCCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGAGTGGGAGGTAACTGGGCTCACCAGATaGCCTTGCCACAACCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSSPSLPRPRLQREWEVTGLTR*PCHNPL Trigger: GAGCGGGTTGTGGCAAGGCCATCTGGTGAGCCCAGT...TACCTCCCACTCCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGAACTTTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGCCCTGGGATCCAGGTaGTCCTGGGGGTCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTLGMVTPAGQGDIPEGALGSR*SWGSWG Trigger: CCCCCAGGACCCCCAGGAGCACCTGGATCCCAGGGC...ACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAAAGTTCTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CTCCACCTAGCCCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGGAGCCATTCTGCACCTaGCAGGACACTGTCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLAHPAHPAYPDPVSSGEPFCT*QDTVLV Trigger: GACAAGGACAGTGTCCTGCCAGGTGCAGAATGGCTC...CCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGGGCTAGGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGGCAGCCCAGCTGCCTCAGGAATCCTCTGGGCCACACACCTCAGGGTCATTGTAACTCACGAGGTTaGCACAGGGCCCAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRQPSCLRNPLGHTPQGHCNSRG*HRAQAT Trigger: GGTGGCCTGGGCCCTGTGCCAACCTCGTGAGTTACA...ATGACCCTGAGGTGTGTGGCCCAGAGGATTCCTGAGGCAGCTGGGCTGCCGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057497.13 |
||
| CDS-3UTR CCA 90 bp | CTCCACCTAGCCCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGTTCACCTTTGGAACCTaGAGGTCCTGCAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHLAHPAHPAYPDPVSSGFTFGT*RSCRSR Trigger: CCTGGACCTGCAGGACCTCCAGGTTCCAAAGGTGAA...CCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGGGCTAGGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATAAGCACCAAGCCAGGACTTCCTGCTaGGCCAGGAGGGCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERAYRAQWGQVTALHKHQARTSC*ARRAWW Trigger: CCACCAGGCCCTCCTGGCCCAGCAGGAAGTCCTGGC...TTGGTGCTTATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | GTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCTGTTCTCTGGAGGCCAGGACTTCCTaGTGGGCCAGGAGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTPAGQGDIPEGGVFCSLEARTS*WARRAW Trigger: CCAGGCCCTCCTGGCCCAGCAGGAAGTCCTGGCCTC...CAGAGAACAGAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCGCAGGGCAGCCAGGATaGCGTCAGGTCGAGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: REAFRAVGQFFCVTCLDPAGQPG*RQVEDL Trigger: GAGGTCCTCGACCTGACGGCATCCTGGCTGCCCTGC...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGAGTGGGAGGTAGAGCCATTCTGCACCTaGCAGGACACTGTCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSSPSLPRPRLQREWEVEPFCT*QDTVLV Trigger: GACAAGGACAGTGTCCTGCCAGGTGCAGAATGGCTC...TACCTCCCACTCCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGGCAGCCCAGCTGCCTCAGGAATCCTCTGGGCCACACACCTCAGGGTCATGCTTCCGGTGAATCCTaGGCAACACCTCCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRQPSCLRNPLGHTPQGHASGES*ATPPLQ Trigger: CTGGAGTGGAGGTGTTGCCCAGGATTCACCGGAAGC...ATGACCCTGAGGTGTGTGGCCCAGAGGATTCCTGAGGCAGCTGGGCTGCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGGTCCTCGTTCCAGGTTaGTGGGGTGCTCTGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQVLVPG*WGALRG Trigger: CCCCCGCAGAGCACCCCACCAACCTGGAACGAGGAC...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | ATAACTCAGAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATATGGGCCAGGAGGGCCTaGTGGACCAGGGCGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ITQREPTGPSGVRSQPCIWARRA*WTRAPH Trigger: ATGGGGCGCCCTGGTCCACCAGGCCCTCCTGGCCCA...TATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTCTGAGTTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCGAGTCCTCACGAGGTTaGCACAGGGCCCAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: REAFRAVGQFFCVTCLDPESSRG*HRAQAT Trigger: GGTGGCCTGGGCCCTGTGCCAACCTCGTGAGGACTC...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111103.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGGTCCTTGTCACCGTGTaGTGGCACCAGTGCCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQVLVTV*WHQCRR Trigger: TCGCCGGCACTGGTGCCATCACACGGTGACAAGGAC...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | TTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCGCAGGGCAGCCAGGATaGCGTCAGGTCGAGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGMVTPAGQGDIPEGGVFAGQPG*RQVEDL Trigger: GAGGTCCTCGACCTGACGGCATCCTGGCTGCCCTGC...GAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCGTCTGCGCTCTTTTGTaGAGGGTCGGGGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: REAFRAVGQFFCVTCLDPVCALL*RVGAQQ Trigger: CTGCTGGGCCCCGACCCTGCACAAAAGAGCGCAGAC...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGGTTGTGATTATTCTCCCACCTCCACCTAGCCCACCCAGCTCACCCAGCGTCCTCGTTCCAGGTTaGTGGGGTGCTCTGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVVIILPPPPSPPSSPSVLVPG*WGALRG Trigger: CCCCCGCAGAGCACCCCACCAACCTGGAACGAGGAC...GCTGGGTGAGCTGGGTGGGCTAGGTGGAGGTGGGAGAATAATCACAACCCTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGGGTTGTGATTATTCTCCCACCTCCACCTAGCCCACCCAGCTCACCCAGCGTCCTTGTCACCGTGTaGTGGCACCAGTGCCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRVVIILPPPPSPPSSPSVLVTV*WHQCRR Trigger: TCGCCGGCACTGGTGCCATCACACGGTGACAAGGAC...GCTGGGTGAGCTGGGTGGGCTAGGTGGAGGTGGGAGAATAATCACAACCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTCCCAATGTCCTCCACAATGGTCCCTGCTTGATGCCCAGTCCCACATGGCCCGGGGACCTGGGATaGCAGTCAGCACTGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QAPNVLHNGPCLMPSPTWPGDLG*QSALCL Trigger: TAGACACAGTGCTGACTGGCATCCCAGGTCCCCGGG...CCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAGGACATTGGGAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGGGTTGTGATTATTCTCCCACCTCCACCTAGCCCACCCAGCTCACCCAGCCTCAGGGCTGCATCCTaGCCAGAGCCACCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRVVIILPPPPSPPSSPSLRAAS*PEPPSG Trigger: TCCTGAGGGTGGCTCTGGGCAGGATGCAGCCCTGAG...GCTGGGTGAGCTGGGTGGGCTAGGTGGAGGTGGGAGAATAATCACAACCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGATTGGCTCTCAGGGCTaGATCCTGCCCAGAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQIGSQG*ILPRAT Trigger: GGTGGCTCTGGGCAGGATGCAGCCCTGAGAGCCAAT...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCTCCTGCAGGTCCAGGTaGTCCCATCTGTCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: REAFRAVGQFFCVTCLDPSCRSR*SHLSWR Trigger: CCTCCAGGACAGATGGGACCACCTGGACCTGCAGGA...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATAAGCACCAATCCTGCAGGTCCAGGTaGTCCCATCTGTCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERAYRAQWGQVTALHKHQSCRSR*SHLSWR Trigger: CCTCCAGGACAGATGGGACCACCTGGACCTGCAGGA...TTGGTGCTTATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCCCAATGTCCTCCACAATGGTCCCTGCTTGATGCCCAGTCCCACATGGACCTGGAGGTCCCACTaGGCCCTTCTCTCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAPNVLHNGPCLMPSPTWTWRSH*ALLSCL Trigger: CAGACAGGAGAGAAGGGCCCAGTGGGACCTCCAGGT...CCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAGGACATTGGGAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGTGGTCCCAAGAGACCTaGAGGTCCCACTGGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQWSQET*RSHWAL Trigger: AAGGGCCCAGTGGGACCTCCAGGTCTCTTGGGACCA...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCGTCTCGGAGCCATTCTaGACCTGGCAGGACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REAFRAVGQFFCVTCLDPVSEPF*TWQDTV Trigger: GACAGTGTCCTGCCAGGTGCAGAATGGCTCCGAGAC...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATAAGCACCAAGTCTCGGAGCCATTCTaGACCTGGCAGGACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERAYRAQWGQVTALHKHQVSEPF*TWQDTV Trigger: GACAGTGTCCTGCCAGGTGCAGAATGGCTCCGAGAC...TTGGTGCTTATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | GTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCTGTTCTCTGATTGGCTCTCAGGGCTaGATCCTGCCCAGAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VTPAGQGDIPEGGVFCSLIGSQG*ILPRAT Trigger: GGTGGCTCTGGGCAGGATGCAGCCCTGAGAGCCAAT...CAGAGAACAGAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCGCTTCCGGTGAATCCTaGGCAACACCTCCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REAFRAVGQFFCVTCLDPASGES*ATPPLQ Trigger: CTGGAGTGGAGGTGTTGCCCAGGATTCACCGGAAGC...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGCCTTGGCCTCCAGCGTaGTCAGCCGTTCACTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQPWPPA*SAVHSC Trigger: ACATGAGTGAACGGCTGACCACGCTGGAGGCCAAGG...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGTCCTGGAGGTCCAGCTaGACCTGTGGGTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQSWRSS*TCGSSP Trigger: AGGAGAAGACCCACAGGTCCAGCTGGACCTCCAGGA...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCTGGTCCCAAGAGACCTaGAGGTCCCACTGGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGMVTPAGQGDIPEGGVFWSQET*RSHWAL Trigger: AAGGGCCCAGTGGGACCTCCAGGTCTCTTGGGACCA...GAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGCCCCCACATCCAGAATCCGGGTCATGTGTACCATGTGCACATCGGTCCTCCCTCTGCAGCGCTaGCTTTGTCCTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQAPTSRIRVMCTMCTSVLPLQR*LCPLLP Trigger: AGGAAGAAGAGGACAAAGCCAGCGCTGCAGAGGGAG...GACCGATGTGCACATGGTACACATGACCCGGATTCTGGATGTGGGGGCCTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTCCCAATGTCCTCCACAATGGTCCCTGCTTGATGCCCAGTCCCACATGGGTCATTGTCTGGACCTaGAGGCTGCTCAGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAPNVLHNGPCLMPSPTWVIVWT*RLLSCF Trigger: GAAGCAGCTGAGCAGCCTTCAGGTCCAGACAATGAC...CCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAGGACATTGGGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGCTCCTCGCTTCATCTTaGGATTGGCTCTCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQLLASS*DWLSGL Trigger: CAGCCCTGAGAGCCAATCTCAAGATGAAGCGAGGAG...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGGGTTGTGATTATTCTCCCACCTCCACCTAGCCCACCCAGCTCACCCAGCCACACCTTCTCCCTCTaGAGCGCTGGCTTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRVVIILPPPPSPPSSPSHTFSL*SAGFVL Trigger: GAGGACAAAGCCAGCGCTGCAGAGGGAGAAGGTGTG...GCTGGGTGAGCTGGGTGGGCTAGGTGGAGGTGGGAGAATAATCACAACCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGGTTGTGATTATTCTCCCACCTCCACCTAGCCCACCCAGCTCACCCAGCCCTTGGCCTCCAGCGTaGTCAGCCGTTCACTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LRVVIILPPPPSPPSSPSPWPPA*SAVHSC Trigger: ACATGAGTGAACGGCTGACCACGCTGGAGGCCAAGG...GCTGGGTGAGCTGGGTGGGCTAGGTGGAGGTGGGAGAATAATCACAACCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCCCAATGTCCTCCACAATGGTCCCTGCTTGATGCCCAGTCCCACATGGGATGGGAATGGCGTCTaGCAGGAAGTCCTCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAPNVLHNGPCLMPSPTWDGNGV*QEVLVP Trigger: TGGAACGAGGACTTCCTGCCAGACGCCATTCCCATC...CCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAGGACATTGGGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATAAGCACCAAGATGGGAATGGCGTCTaGCAGGAAGTCCTCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERAYRAQWGQVTALHKHQDGNGV*QEVLVP Trigger: TGGAACGAGGACTTCCTGCCAGACGCCATTCCCATC...TTGGTGCTTATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCATTCTGGATGGATGGTCTCATTAAATGGTCCTTCCTTCTCCATGGGGGAGCCAGGACTTCCTGCTaGGCCAGGAGGGCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPFWMDGLIKWSFLLHGGARTSC*ARRAWW Trigger: CCACCAGGCCCTCCTGGCCCAGCAGGAAGTCCTGGC...TCCCCCATGGAGAAGGAAGGACCATTTAATGAGACCATCCATCCAGAATGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGCCCCCACATCCAGAATCCGGGTCATGTGTACCATGTGCACATCGGTCACAGCAGGGTTCAGCTaGGAGTCTCCATTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PQAPTSRIRVMCTMCTSVTAGFS*ESPFSL Trigger: CAAGGAGAATGGAGACTCCCAGCTGAACCCTGCTGT...GACCGATGTGCACATGGTACACATGACCCGGATTCTGGATGTGGGGGCCTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | ATAACTCAGAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATAACTGGGCTCACCAGATaGCCTTGCCACAACCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITQREPTGPSGVRSQPCITGLTR*PCHNPL Trigger: GAGCGGGTTGTGGCAAGGCCATCTGGTGAGCCCAGT...TATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTCTGAGTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATAAGCACCAACTCCCTCTGCAGCGCTaGCTTTGTCCTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERAYRAQWGQVTALHKHQLPLQR*LCPLLP Trigger: AGGAAGAAGAGGACAAAGCCAGCGCTGCAGAGGGAG...TTGGTGCTTATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | ATAACTCAGAGAGAGCCTACAGGGCCCAGTGGGGTCAGGTCACAGCCTTGCATACACACCTTCTCCCTCTaGAGCGCTGGCTTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITQREPTGPSGVRSQPCIHTFSL*SAGFVL Trigger: GAGGACAAAGCCAGCGCTGCAGAGGGAGAAGGTGTG...TATGCAAGGCTGTGACCTGACCCCACTGGGCCCTGTAGGCTCTCTCTGAGTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGAACTTTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTTTCACCTTTGGAACCTaGAGGTCCTGCAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTLGMVTPAGQGDIPEGFTFGT*RSCRSR Trigger: CCTGGACCTGCAGGACCTCCAGGTTCCAAAGGTGAA...ACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAAAGTTCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCCCCTTCTCTCCTGTCTaGCCCTGTTCACCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: REAFRAVGQFFCVTCLDPPFSPV*PCSPLE Trigger: TTCCAAAGGTGAACAGGGCCAGACAGGAGAGAAGGG...GGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCTCT 57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGTGGCCATGATGGAGGTTGTAGGTCCCATTCTGGATGGATGGTCTCATCTCAGGGCTGCATCCTaGCCAGAGCCACCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERVAMMEVVGPILDGWSHLRAAS*PEPPSG Trigger: TCCTGAGGGTGGCTCTGGGCAGGATGCAGCCCTGAG...ATGAGACCATCCATCCAGAATGGGACCTACAACCTCCATCATGGCCACTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCACAGCAGGGTTCAGCTaGGAGTCTCCATTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGMVTPAGQGDIPEGGVFTAGFS*ESPFSL Trigger: CAAGGAGAATGGAGACTCCCAGCTGAACCCTGCTGT...GAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | TTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCTTGTCTGTTGGTGTCTaGAGGGAATACAGGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGMVTPAGQGDIPEGGVFLSVGV*REYRTP Trigger: AGGCGTCCTGTATTCCCTGCAGACACCAACAGACAA...GAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCCTCTTGGAAGCTGACCCCTACCCGCAGCCCTAAGGAAGACCAGAGGAAGTGGACTCCAATCATATaGTCAAGGATAAGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSWKLTPTRSPKEDQRKWTPII*SRIRTL Trigger: GAGGGTCCTTATCCTTGAGCATATGATTGGAGTCCA...CTTCCTCTGGTCTTCCTTAGGGCTGCGGGTAGGGGTCAGCTTCCAAGAGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGTGGCCATGATGGAGGTTGTAGGTCCCATTCTGGATGGATGGTCTCATTCCTGGAGGTCCAGCTaGACCTGTGGGTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERVAMMEVVGPILDGWSHSWRSS*TCGSSP Trigger: AGGAGAAGACCCACAGGTCCAGCTGGACCTCCAGGA...ATGAGACCATCCATCCAGAATGGGACCTACAACCTCCATCATGGCCACTCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCATTCTGGATGGATGGTCTCATTAAATGGTCCTTCCTTCTCCATGGGGGAGTCATTGTCTGGACCTaGAGGCTGCTCAGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPFWMDGLIKWSFLLHGGVIVWT*RLLSCF Trigger: GAAGCAGCTGAGCAGCCTTCAGGTCCAGACAATGAC...TCCCCCATGGAGAAGGAAGGACCATTTAATGAGACCATCCATCCAGAATGGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCATTCTGGATGGATGGTCTCATTAAATGGTCCTTCCTTCTCCATGGGGGAGATAAGGACCCTCTCTaGCAGGATCTTCAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPFWMDGLIKWSFLLHGGDKDPL*QDLQGL Trigger: GAGGCCCTGAAGATCCTGGCAGAGAGGGTCCTTATC...TCCCCCATGGAGAAGGAAGGACCATTTAATGAGACCATCCATCCAGAATGGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGTGGCCATGATGGAGGTTGTAGGTCCCATTCTGGATGGATGGTCTCATGATAAGGACCCTCTCTaGCAGGATCTTCAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERVAMMEVVGPILDGWSHDKDPL*QDLQGL Trigger: GAGGCCCTGAAGATCCTGGCAGAGAGGGTCCTTATC...ATGAGACCATCCATCCAGAATGGGACCTACAACCTCCATCATGGCCACTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCATTCTGGATGGATGGTCTCATTAAATGGTCCTTCCTTCTCCATGGGGGACCCTTCTCTCCTGTCTaGCCCTGTTCACCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPFWMDGLIKWSFLLHGGPFSPV*PCSPLE Trigger: TTCCAAAGGTGAACAGGGCCAGACAGGAGAGAAGGG...TCCCCCATGGAGAAGGAAGGACCATTTAATGAGACCATCCATCCAGAATGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 90 bp | GGGGGAGCCGGCGCCCTGCTCCGGGTAGCCGTGCTGCTGCAAGGCTaGTGCCGGGAACGGGTAGAGAAAGCCGGTGGCCAGCGCCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: GGAGALLRVAVLLQG*CRERVEKAGGQRRP Trigger: GGGTCGGCGCTGGCCACCGGCTTTCTCTACCCGTTCCCGGCAGCAGCCTTGCAGCAGCACGGCTACCCGGAGCAGGGCGCCGGCTCCCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 90 bp | GGAGCCGGCGCCCTGCTCCGGGTAGCCGTGCTGCTGCAAGGCTGCTaGCGGGAACGGGTAGAGAAAGCCGGTGGCCAGCGCCGACCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAGALLRVAVLLQGC*RERVEKAGGQRRPA Trigger: TGCGGGTCGGCGCTGGCCACCGGCTTTCTCTACCCGTTCCCGGCAGCAGCCTTGCAGCAGCACGGCTACCCGGAGCAGGGCGCCGGCTCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 90 bp | CGTGCTGCTGCAAGGCTGCTGCCGGGAACGGGTAGAGAAAGCCGGTaGCCAGCGCCGACCCGCACAAGCAGCAGCACGCCCATGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: RAAARLLPGTGRESR*PAPTRTSSSTPMVT Trigger: TGTTACCATGGGCGTGCTGCTGCTTGTGCGGGTCGGCGCTGGCCACCGGCTTTCTCTACCCGTTCCCGGCAGCAGCCTTGCAGCAGCACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 90 bp | GGGTCTTCTCCTCCGGGGCCCTGGATGTGCGATGGGAATGGCGTCTaGCAGGAAGTCCTCGTTCCAGGTTGGTGGGGTGCTCTGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSPPGPWMCDGNGV*QEVLVPGWWGALRG Trigger: CCCCCGCAGAGCACCCCACCAACCTGGAACGAGGACTTCCTGCCAGACGCCATTCCCATCGCACATCCAGGGCCCCGGAGGAGAAGACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | CTCCACCTAGCCCACCCAGCTCACCCAGCTTACCCAGACCCCGTCTCCAGCGGGGGGGGTGGCAGGTCATaGTCTGGACCTGAAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHLAHPAHPAYPDPVSSGGGGRS*SGPEGC Trigger: GCAGCCTTCAGGTCCAGACAATGACCTGCCACCCCC...CCCGCTGGAGACGGGGTCTGGGTAAGCTGGGTGAGCTGGGTGGGCTAGGTGGAG 67% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 90 bp | AGGTCCTGCAGGTCCAGGTGGTCCCATCTGTCCTGGAGGTCCAGCTaGACCTGTGGGTCTTCTCCTCCGGGGCCCTGGATGTGCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSCRSRWSHLSWRSS*TCGSSPPGPWMCDG Trigger: CCCATCGCACATCCAGGGCCCCGGAGGAGAAGACCCACAGGTCCAGCTGGACCTCCAGGACAGATGGGACCACCTGGACCTGCAGGACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 90 bp | GGGGTGCTCTGCGGGGGTGGCAGGTCATTGTCTGGACCTGAAGGCTaGTCAGCTGCTTCCAGCAAGAGGACCTTGGCCTCCAGCGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GVLCGGGRSLSGPEG*SAASSKRTLASSVV Trigger: GACCACGCTGGAGGCCAAGGTCCTCTTGCTGGAAGCAGCTGAGCAGCCTTCAGGTCCAGACAATGACCTGCCACCCCCGCAGAGCACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 90 bp | CAGGTCCAGGTGGTCCCATCTGTCCTGGAGGTCCAGCTGGACCTGTaGGTCTTCTCCTCCGGGGCCCTGGATGTGCGATGGGAATGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QVQVVPSVLEVQLDL*VFSSGALDVRWEWR Trigger: ACGCCATTCCCATCGCACATCCAGGGCCCCGGAGGAGAAGACCCACAGGTCCAGCTGGACCTCCAGGACAGATGGGACCACCTGGACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS TCA 90 bp | GGGCAGCCAGGATGCCGTCAGGTCGAGGACCTCCTCGCTTCATCTTaGGATTGGCTCTCAGGGCTGCATCCTGCCCAGAGCCACCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQPGCRQVEDLLASS*DWLSGLHPAQSHPQ Trigger: CTGAGGGTGGCTCTGGGCAGGATGCAGCCCTGAGAGCCAATCTCAAGATGAAGCGAGGAGGTCCTCGACCTGACGGCATCCTGGCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 90 bp | GACCTGTGGGTCTTCTCCTCCGGGGCCCTGGATGTGCGATGGGAATaGCGTCTGGCAGGAAGTCCTCGTTCCAGGTTGGTGGGGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLWVFSSGALDVRWE*RLAGSPRSRLVGCS Trigger: AGAGCACCCCACCAACCTGGAACGAGGACTTCCTGCCAGACGCCATTCCCATCGCACATCCAGGGCCCCGGAGGAGAAGACCCACAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 90 bp | TGGGAATGGCGTCTGGCAGGAAGTCCTCGTTCCAGGTTGGTGGGGTaGTCTGCGGGGGTGGCAGGTCATTGTCTGGACCTGAAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WEWRLAGSPRSRLVG*SAGVAGHCLDLKAA Trigger: AGCAGCCTTCAGGTCCAGACAATGACCTGCCACCCCCGCAGAGCACCCCACCAACCTGGAACGAGGACTTCCTGCCAGACGCCATTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 90 bp | GGACCTCCTCGCTTCATCTTGAGATTGGCTCTCAGGGCTGCATCCTaGCCAGAGCCACCCTCAGGAGAGGCCAGGGGATCATGGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPPRFILRLALRAAS*PEPPSGEARGSWTP Trigger: TGGAGTCCATGATCCCCTGGCCTCTCCTGAGGGTGGCTCTGGGCAGGATGCAGCCCTGAGAGCCAATCTCAAGATGAAGCGAGGAGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 90 bp | AGGTCGAGGACCTCCTCGCTTCATCTTGAGATTGGCTCTCAGGGCTaGATCCTGCCCAGAGCCACCCTCAGGAGAGGCCAGGGGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: RSRTSSLHLEIGSQG*ILPRATLRRGQGIM Trigger: CATGATCCCCTGGCCTCTCCTGAGGGTGGCTCTGGGCAGGATGCAGCCCTGAGAGCCAATCTCAAGATGAAGCGAGGAGGTCCTCGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 90 bp | AGCGCTGGCTTTGTCCTCTTCTTCCTTCACACTGGGCTCACCAGATaGCCTTGCCACAACCCGCTCATCCACCAGGCCCTGGGATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGFVLFFLHTGLTR*PCHNPLIHQALGSR Trigger: CCTGGATCCCAGGGCCTGGTGGATGAGCGGGTTGTGGCAAGGCCATCTGGTGAGCCCAGTGTGAAGGAAGAAGAGGACAAAGCCAGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCCCAATGTCCTCCACAATGGTCCCTGCTTGATGCCCAGTCCCACATGGGGGGGTGGCAGGTCATaGTCTGGACCTGAAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QAPNVLHNGPCLMPSPTWGGGRS*SGPEGC Trigger: GCAGCCTTCAGGTCCAGACAATGACCTGCCACCCCC...CCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAGGACATTGGGAGCCTG 61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | GTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCTGTTCTCTGAGAGTCCTCACGAGGTaGGCACAGGGCCCAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VTPAGQGDIPEGGVFCSLRVLTR*AQGPGH Trigger: GTGGCCTGGGCCCTGTGCCAACCTCGTGAGGACTCT...CAGAGAACAGAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGGGCAGGACACTGTCCTaGTCACCGTGTGATGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQGRTLS*SPCDGT Trigger: GGTGCCATCACACGGTGACAAGGACAGTGTCCTGCC...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCTTCAGGGCTGTGGGGCAGTTCTTCTGTGTAACCTGCCTGGACCCCAGGCTCACCAGATGGCCTaGCCACAACCCGCTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSLQGCGAVLLCNLPGPQAHQMA*PQPAHP Trigger: TGGATGAGCGGGTTGTGGCAAGGCCATCTGGTGAGC...CTGGGGTCCAGGCAGGTTACACAGAAGAACTGCCCCACAGCCCTGAAGGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 90 bp | GCTGCATCCTGCCCAGAGCCACCCTCAGGAGAGGCCAGGGGATCATaGACTCCAATCATATGCTCAAGGATAAGGACCCTCTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AASCPEPPSGEARGS*TPIICSRIRTLSAR Trigger: CCTGGCAGAGAGGGTCCTTATCCTTGAGCATATGATTGGAGTCCATGATCCCCTGGCCTCTCCTGAGGGTGGCTCTGGGCAGGATGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | TTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCGGCAGGACACTGTCCTaGTCACCGTGTGATGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LGMVTPAGQGDIPEGGVFGRTLS*SPCDGT Trigger: GGTGCCATCACACGGTGACAAGGACAGTGTCCTGCC...GAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 90 bp | GAGCCACCCTCAGGAGAGGCCAGGGGATCATGGACTCCAATCATATaGTCAAGGATAAGGACCCTCTCTGCCAGGATCTTCAGGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EPPSGEARGSWTPII*SRIRTLSARIFRAS Trigger: CGAGGCCCTGAAGATCCTGGCAGAGAGGGTCCTTATCCTTGAGCATATGATTGGAGTCCATGATCCCCTGGCCTCTCCTGAGGGTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCCCAATGTCCTCCACAATGGTCCCTGCTTGATGCCCAGTCCCACATGGCCTCCTCGCTTCATCTaGAGATTGGCTCTCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QAPNVLHNGPCLMPSPTWPPRFI*RLALRA Trigger: AGCCCTGAGAGCCAATCTCAAGATGAAGCGAGGAGG...CCATGTGGGACTGGGCATCAAGCAGGGACCATTGTGGAGGACATTGGGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 90 bp | GCAGGGTTCAGCTGGGAGTCTCCATTCTCCTTGTCTGTTGGTGTCTaGAGGGAATACAGGACGCCTTGGGGAGTGTTTGGCAAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGFSWESPFSLSVGV*REYRTPWGVFGKRP Trigger: TGGCCTCTTGCCAAACACTCCCCAAGGCGTCCTGTATTCCCTGCAGACACCAACAGACAAGGAGAATGGAGACTCCCAGCTGAACCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | TTAGGGATGGTCACTCCTGCTGGGCAGGGAGACATACCCGAGGGTGGTGTTTTCCCTCCTCGCTTCATCTaGAGATTGGCTCTCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGMVTPAGQGDIPEGGVFPPRFI*RLALRA Trigger: AGCCCTGAGAGCCAATCTCAAGATGAAGCGAGGAGG...GAAAACACCACCCTCGGGTATGTCTCCCTGCCCAGCAGGAGTGACCATCCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 90 bp | GGGATCATGGACTCCAATCATATGCTCAAGGATAAGGACCCTCTCTaGCAGGATCTTCAGGGCCTCGCGAAGCTGCTGCACACCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GIMDSNHMLKDKDPL*QDLQGLAKLLHTFS Trigger: GGAGAAGGTGTGCAGCAGCTTCGCGAGGCCCTGAAGATCCTGGCAGAGAGGGTCCTTATCCTTGAGCATATGATTGGAGTCCATGATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 90 bp | GGTACAGTTCATACATTCTTCCTCGCAGTTGCTTCCGGTGAATCCTaGGCAACACCTCCACTCCAGCGCAGTCACCGTGCGGTAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GTVHTFFLAVASGES*ATPPLQRSHRAVGN Trigger: GTTTCCTACCGCACGGTGACTGCGCTGGAGTGGAGGTGTTGCCCAGGATTCACCGGAAGCAACTGCGAGGAAGAATGTATGAACTGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGCCCCCACATCCAGAATCCGGGTCATGTGTACCATGTGCACATCGGTCCATTCTCCTTGTCTGTaGGTGTCTGCAGGGAATACA | + |
|
Preference number: 5 (lower is better) Translates to: PQAPTSRIRVMCTMCTSVHSPCL*VSAGNT Trigger: TGTATTCCCTGCAGACACCAACAGACAAGGAGAATG...GACCGATGTGCACATGGTACACATGACCCGGATTCTGGATGTGGGGGCCTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 90 bp | CCTGGGATGCCAGTCAGCACTGTGTCTACAACAGCAGGGTTCAGCTaGGAGTCTCCATTCTCCTTGTCTGTTGGTGTCTGCAGGGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: PGMPVSTVSTTAGFS*ESPFSLSVGVCREY Trigger: GTATTCCCTGCAGACACCAACAGACAAGGAGAATGGAGACTCCCAGCTGAACCCTGCTGTTGTAGACACAGTGCTGACTGGCATCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCATTCTGGATGGATGGTCTCATTAAATGGTCCTTCCTTCTCCATGGGGGACGCCTTGGGGAGTGTTaGGCAAGAGGCCAGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VPFWMDGLIKWSFLLHGGRLGEC*ARGQDF Trigger: GAAGTCCTGGCCTCTTGCCAAACACTCCCCAAGGCG...TCCCCCATGGAGAAGGAAGGACCATTTAATGAGACCATCCATCCAGAATGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCATTCTGGATGGATGGTCTCATTAAATGGTCCTTCCTTCTCCATGGGGGACATTCTCCTTGTCTGTaGGTGTCTGCAGGGAATACA | + |
|
Preference number: 5 (lower is better) Translates to: VPFWMDGLIKWSFLLHGGHSPCL*VSAGNT Trigger: TGTATTCCCTGCAGACACCAACAGACAAGGAGAATG...TCCCCCATGGAGAAGGAAGGACCATTTAATGAGACCATCCATCCAGAATGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 72 bp | TGTGATGGCACCAGTGCCGGCGACTCGAGTAGCCGTTaGCGGGGGAGCCGGCGCCCTGCTCCGGGTAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: CDGTSAGDSSSR*RGSRRPAPGSR Trigger: ACGGCTACCCGGAGCAGGGCGCCGGCTCCCCCGGCAACGGCTACTCGAGTCGCCGGCACTGGTGCCATCACA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 72 bp | GCCCTGCTCCGGGTAGCCGTGCTGCTGCAAGGCTGCTaGCGGGAACGGGTAGAGAAAGCCGGTGGCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ALLRVAVLLQGC*RERVEKAGGQR Trigger: GCGCTGGCCACCGGCTTTCTCTACCCGTTCCCGGCAGCAGCCTTGCAGCAGCACGGCTACCCGGAGCAGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 72 bp | GGCGCCCTGCTCCGGGTAGCCGTGCTGCTGCAAGGCTaGTGCCGGGAACGGGTAGAGAAAGCCGGTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GALLRVAVLLQG*CRERVEKAGGQ Trigger: CTGGCCACCGGCTTTCTCTACCCGTTCCCGGCAGCAGCCTTGCAGCAGCACGGCTACCCGGAGCAGGGCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | GCAAGGCTGCTGCCGGGAACGGGTAGAGAAAGCCGGTaGCCAGCGCCGACCCGCACAAGCAGCAGCACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARLLPGTGRESR*PAPTRTSSSTP Trigger: GGGCGTGCTGCTGCTTGTGCGGGTCGGCGCTGGCCACCGGCTTTCTCTACCCGTTCCCGGCAGCAGCCTTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | CCTCCGGGGCCCTGGATGTGCGATGGGAATGGCGTCTaGCAGGAAGTCCTCGTTCCAGGTTGGTGGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPGPWMCDGNGV*QEVLVPGWWGA Trigger: AGCACCCCACCAACCTGGAACGAGGACTTCCTGCCAGACGCCATTCCCATCGCACATCCAGGGCCCCGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | GTGGTCCCATCTGTCCTGGAGGTCCAGCTGGACCTGTaGGTCTTCTCCTCCGGGGCCCTGGATGTGCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: VVPSVLEVQLDL*VFSSGALDVRW Trigger: CCATCGCACATCCAGGGCCCCGGAGGAGAAGACCCACAGGTCCAGCTGGACCTCCAGGACAGATGGGACCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 72 bp | CGTCTGGCAGGAAGTCCTCGTTCCAGGTTGGTGGGGTaGTCTGCGGGGGTGGCAGGTCATTGTCTGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLAGSPRSRLVG*SAGVAGHCLDL Trigger: CAGGTCCAGACAATGACCTGCCACCCCCGCAGAGCACCCCACCAACCTGGAACGAGGACTTCCTGCCAGACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | CTGTGGGTCTTCTCCTCCGGGGCCCTGGATGTGCGATaGGAATGGCGTCTGGCAGGAAGTCCTCGTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWVFSSGALDVR*EWRLAGSPRSR Trigger: CCTGGAACGAGGACTTCCTGCCAGACGCCATTCCCATCGCACATCCAGGGCCCCGGAGGAGAAGACCCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | TCCAGCTGGACCTGTGGGTCTTCTCCTCCGGGGCCCTaGATGTGCGATGGGAATGGCGTCTGGCAGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSWTCGSSPPGP*MCDGNGVWQEV Trigger: GACTTCCTGCCAGACGCCATTCCCATCGCACATCCAGGGCCCCGGAGGAGAAGACCCACAGGTCCAGCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 72 bp | CAGGTTGGTGGGGTGCTCTGCGGGGGTGGCAGGTCATaGTCTGGACCTGAAGGCTGCTCAGCTGCTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QVGGVLCGGGRS*SGPEGCSAASS Trigger: GCTGGAAGCAGCTGAGCAGCCTTCAGGTCCAGACAATGACCTGCCACCCCCGCAGAGCACCCCACCAACCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | GGACCACCGTCTCGGAGCCATTCTGCACCTGGCAGGACACTGTCCTaGTCACCGTGTGATGGCACCAGTGCCGGCGACTCGAGTAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GPPSRSHSAPGRTLS*SPCDGTSAGDSSSR Trigger: ACGGCTACTCGAGTCGCCGGCACTGGTGCCATCACACGGTGACAAGGACAGTGTCCTGCCAGGTGCAGAATGGCTCCGAGACGGTGGTCC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | TCCTCGTTCCAGGTTGGTGGGGTGCTCTGCGGGGGTGGCAGGTCATaGTCTGGACCTGAAGGCTGCTCAGCTGCTTCCAGCAAGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SSFQVGGVLCGGGRS*SGPEGCSAASSKRT Trigger: GGTCCTCTTGCTGGAAGCAGCTGAGCAGCCTTCAGGTCCAGACAATGACCTGCCACCCCCGCAGAGCACCCCACCAACCTGGAACGAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | GATGTGCGATGGGAATGGCGTCTGGCAGGAAGTCCTCGTTCCAGGTaGGTGGGGTGCTCTGCGGGGGTGGCAGGTCATTGTCTGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: DVRWEWRLAGSPRSR*VGCSAGVAGHCLDL Trigger: CAGGTCCAGACAATGACCTGCCACCCCCGCAGAGCACCCCACCAACCTGGAACGAGGACTTCCTGCCAGACGCCATTCCCATCGCACATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | GCCAGGATGCCGTCAGGTCGAGGACCTCCTCGCTTCATCTTGAGATaGGCTCTCAGGGCTGCATCCTGCCCAGAGCCACCCTCAGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARMPSGRGPPRFILR*ALRAASCPEPPSGE Trigger: CTCTCCTGAGGGTGGCTCTGGGCAGGATGCAGCCCTGAGAGCCAATCTCAAGATGAAGCGAGGAGGTCCTCGACCTGACGGCATCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | AGGGCAGCCAGGATGCCGTCAGGTCGAGGACCTCCTCGCTTCATCTaGAGATTGGCTCTCAGGGCTGCATCCTGCCCAGAGCCACCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RAARMPSGRGPPRFI*RLALRAASCPEPPS Trigger: TGAGGGTGGCTCTGGGCAGGATGCAGCCCTGAGAGCCAATCTCAAGATGAAGCGAGGAGGTCCTCGACCTGACGGCATCCTGGCTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 72 bp | TGCGGGGGTGGCAGGTCATTGTCTGGACCTGAAGGCTaGTCAGCTGCTTCCAGCAAGAGGACCTTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CGGGRSLSGPEG*SAASSKRTLAS Trigger: GGAGGCCAAGGTCCTCTTGCTGGAAGCAGCTGAGCAGCCTTCAGGTCCAGACAATGACCTGCCACCCCCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | AATGGCGTCTGGCAGGAAGTCCTCGTTCCAGGTTGGTaGGGTGCTCTGCGGGGGTGGCAGGTCATTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NGVWQEVLVPGW*GALRGWQVIVW Trigger: CCAGACAATGACCTGCCACCCCCGCAGAGCACCCCACCAACCTGGAACGAGGACTTCCTGCCAGACGCCATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | GTCTTCTCCTCCGGGGCCCTGGATGTGCGATGGGAATaGCGTCTGGCAGGAAGTCCTCGTTCCAGGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VFSSGALDVRWE*RLAGSPRSRLV Trigger: CACCAACCTGGAACGAGGACTTCCTGCCAGACGCCATTCCCATCGCACATCCAGGGCCCCGGAGGAGAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 72 bp | TCTCGGAGCCATTCTGCACCTGGCAGGACACTGTCCTaGTCACCGTGTGATGGCACCAGTGCCGGCGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SRSHSAPGRTLS*SPCDGTSAGDS Trigger: CGAGTCGCCGGCACTGGTGCCATCACACGGTGACAAGGACAGTGTCCTGCCAGGTGCAGAATGGCTCCGAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS TCA 72 bp | GGTGCTCTGCGGGGGTGGCAGGTCATTGTCTGGACCTaGAGGCTGCTCAGCTGCTTCCAGCAAGAGGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: GALRGWQVIVWT*RLLSCFQQEDL Trigger: AAGGTCCTCTTGCTGGAAGCAGCTGAGCAGCCTTCAGGTCCAGACAATGACCTGCCACCCCCGCAGAGCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 72 bp | CTCTTCTTCCTTCACACTGGGCTCACCAGATGGCCTTaGCACAACCCGCTCATCCACCAGGCCCTGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: LFFLHTGLTRWP*HNPLIHQALGS Trigger: GGATCCCAGGGCCTGGTGGATGAGCGGGTTGTGGCAAGGCCATCTGGTGAGCCCAGTGTGAAGGAAGAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 72 bp | CCTCTTCTTCCTTCACACTGGGCTCACCAGATGGCCTaGCCACAACCCGCTCATCCACCAGGCCCTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PLLPSHWAHQMA*PQPAHPPGPGI Trigger: GATCCCAGGGCCTGGTGGATGAGCGGGTTGTGGCAAGGCCATCTGGTGAGCCCAGTGTGAAGGAAGAAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | TTGTCTGGACCTGAAGGCTGCTCAGCTGCTTCCAGCAAGAGGACCTaGGCCTCCAGCGTGGTCAGCCGTTCACTCATGTCGCTAAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSGPEGCSAASSKRT*ASSVVSRSLMSLSR Trigger: CCGGCTTAGCGACATGAGTGAACGGCTGACCACGCTGGAGGCCAAGGTCCTCTTGCTGGAAGCAGCTGAGCAGCCTTCAGGTCCAGACAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | TGGCTTTGTCCTCTTCTTCCTTCACACTGGGCTCACCAGATGGCCTaGCCACAACCCGCTCATCCACCAGGCCCTGGGATCCAGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WLCPLLPSHWAHQMA*PQPAHPPGPGIQVL Trigger: GAGCACCTGGATCCCAGGGCCTGGTGGATGAGCGGGTTGTGGCAAGGCCATCTGGTGAGCCCAGTGTGAAGGAAGAAGAGGACAAAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | TCCATTCTCCTTGTCTGTTGGTGTCTGCAGGGAATACAGGACGCCTaGGGGAGTGTTTGGCAAGAGGCCAGGACTTCCTGCTGGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SILLVCWCLQGIQDA*GSVWQEARTSCWAR Trigger: CCTGGCCCAGCAGGAAGTCCTGGCCTCTTGCCAAACACTCCCCAAGGCGTCCTGTATTCCCTGCAGACACCAACAGACAAGGAGAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | CATACATTCTTCCTCGCAGTTGCTTCCGGTGAATCCTaGGCAACACCTCCACTCCAGCGCAGTCACCGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: HTFFLAVASGES*ATPPLQRSHRA Trigger: CGCACGGTGACTGCGCTGGAGTGGAGGTGTTGCCCAGGATTCACCGGAAGCAACTGCGAGGAAGAATGTATG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | TTTGTCCTCTTCTTCCTTCACACTGGGCTCACCAGATaGCCTTGCCACAACCCGCTCATCCACCAGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FVLFFLHTGLTR*PCHNPLIHQAL Trigger: CAGGGCCTGGTGGATGAGCGGGTTGTGGCAAGGCCATCTGGTGAGCCCAGTGTGAAGGAAGAAGAGGACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | CTCATGTCGCTAAGCCGGGTACAGTTCATACATTCTTCCTCGCAGTaGCTTCCGGTGAATCCTGGGCAACACCTCCACTCCAGCGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LMSLSRVQFIHSSSQ*LPVNPGQHLHSSAV Trigger: GACTGCGCTGGAGTGGAGGTGTTGCCCAGGATTCACCGGAAGCAACTGCGAGGAAGAATGTATGAACTGTACCCGGCTTAGCGACATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 72 bp | AGCTGGGAGTCTCCATTCTCCTTGTCTGTTGGTGTCTaGAGGGAATACAGGACGCCTTGGGGAGTGTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SWESPFSLSVGV*REYRTPWGVFG Trigger: GCCAAACACTCCCCAAGGCGTCCTGTATTCCCTGCAGACACCAACAGACAAGGAGAATGGAGACTCCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS GCA 72 bp | GACTCCAATCATATGCTCAAGGATAAGGACCCTCTCTaGCAGGATCTTCAGGGCCTCGCGAAGCTGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: DSNHMLKDKDPL*QDLQGLAKLLH Trigger: GTGCAGCAGCTTCGCGAGGCCCTGAAGATCCTGGCAGAGAGGGTCCTTATCCTTGAGCATATGATTGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | TTGTCTGTTGGTGTCTGCAGGGAATACAGGACGCCTTaGGGAGTGTTTGGCAAGAGGCCAGGACTTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSVGVCREYRTP*GVFGKRPGLPA Trigger: AGCAGGAAGTCCTGGCCTCTTGCCAAACACTCCCCAAGGCGTCCTGTATTCCCTGCAGACACCAACAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CAA 90 bp | CTACAACAGCAGGGTTCAGCTGGGAGTCTCCATTCTCCTTGTCTGTaGGTGTCTGCAGGGAATACAGGACGCCTTGGGGAGTGTTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQQQGSAGSLHSPCL*VSAGNTGRLGECLA Trigger: TGCCAAACACTCCCCAAGGCGTCCTGTATTCCCTGCAGACACCAACAGACAAGGAGAATGGAGACTCCCAGCTGAACCCTGCTGTTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS CCA 72 bp | CCAGTCAGCACTGTGTCTACAACAGCAGGGTTCAGCTaGGAGTCTCCATTCTCCTTGTCTGTTGGTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PVSTVSTTAGFS*ESPFSLSVGVC Trigger: GCAGACACCAACAGACAAGGAGAATGGAGACTCCCAGCTGAACCCTGCTGTTGTAGACACAGTGCTGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||
| CDS TCA 72 bp | TACAGTTCATACATTCTTCCTCGCAGTTGCTTCCGGTaGATCCTGGGCAACACCTCCACTCCAGCGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: YSSYILPRSCFR*ILGNTSTPAQS Trigger: TGACTGCGCTGGAGTGGAGGTGTTGCCCAGGATTCACCGGAAGCAACTGCGAGGAAGAATGTATGAACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057497.13 ENSMUST00000111103.2 |
||