RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL22A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079022

Ensembl transcript IDs: ENSMUST00000159993.8, ENSMUST00000160513.2, ENSMUST00000229585.2

Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCAGAAGAATaGCCTAGTCGGCCATCAGTGGGAAGAGAGACCTCTTGGTCTTAT +
Preference number: 1 (lower is better)
Translates to: VPPELVSPAAYVAEE*PSRPSVGRETSWSY
Trigger: ATAAGACCAAGAGGTCTCTCTTCCCACTGATGGCCGACTAGGCCATTCTTCTGCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 90 bp GGCCATCAGTGGGAAGAGAGACCTCTTGGTCTTATAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGAGGGT +
Preference number: 1 (lower is better)
Translates to: GHQWEERPLGLINFI*PSTGERQGQEVGEG
Trigger: ACCCTCTCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTATAAGACCAAGAGGTCTCTCTTCCCACTGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 90 bp ACATGCGTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTaGAACAGACCCTGTCTGCAGTGGTTCCTGAGCATGCCGAAAGGA +
Preference number: 1 (lower is better)
Translates to: TCVHRNPPKEVSFPI*NRPCLQWFLSMPKG
Trigger: TCCTTTCGGCATGCTCAGGAACCACTGCAGACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGACGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 90 bp GCCAGTACCTGGCAAATACAGAAGTGGATGCTCATAGTCATCTATTaGATGGAACACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACC +
Preference number: 1 (lower is better)
Translates to: ASTWQIQKWMLIVIY*MEHRAPSGGAREST
Trigger: GGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGTTCCATCCAATAGATGACTATGAGCATCCACTTCTGTATTTGCCAGGTACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 90 bp CTTGAGCAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATaGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTC +
Preference number: 1 (lower is better)
Translates to: LEQDIERNPVSSIPP*LLLQLLPPGSCFEF
Trigger: GAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTGCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 90 bp AGATATCAAGGAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATaGTGCCTACCTCAACCCTACCAAATCAACTTTTCTGCACCAGTA +
Preference number: 1 (lower is better)
Translates to: RYQGGSRENLSCTDG*CLPQPYQINFSAPV
Trigger: TACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTCCTTGATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 90 bp TTCCAGGAAAGAGGTAAAATCAACAAGTGCATACATGGTCAGGGTTaGATAGCACCGAGGGTTCCTCAGAAATTGGCTGTCACACTTCAG +
Preference number: 1 (lower is better)
Translates to: FQERGKINKCIHGQG*IAPRVPQKLAVTLQ
Trigger: CTGAAGTGTGACAGCCAATTTCTGAGGAACCCTCGGTGCTATGCAACCCTGACCATGTATGCACTTGTTGATTTTACCTCTTTCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 90 bp GAGAACATCAACAAGGGTGATTTGTTCAGACTGCAGGTAAGGACATaGGTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGC +
Preference number: 1 (lower is better)
Translates to: ENINKGDLFRLQVRT*VHRNPPKEVSFPIC
Trigger: GCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGACGCATGTCCTTACCTGCAGTCTGAACAAATCACCCTTGTTGATGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 90 bp CCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTCTGCAGTaGTTCCTGAGCATGCCGAAAGGATTTCTTTCCATATGCCAAAAC +
Preference number: 1 (lower is better)
Translates to: PKEVSFPICNRPCLQ*FLSMPKGFLSICQN
Trigger: GTTTTGGCATATGGAAAGAAATCCTTTCGGCATGCTCAGGAACCACTGCAGACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 90 bp CCAGGAGCAATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATaGTGTGTGTACAGAACACACACAGACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: PGAMEREIHLVITCS*CVYRTHTDTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATTGCTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 90 bp AAGTCAGCTTTCCAATTTGCAACAGACCCTGTCTGCAGTGGTTCCTaGGCATGCCGAAAGGATTTCTTTCCATATGCCAAAACATTTGAA +
Preference number: 1 (lower is better)
Translates to: KSAFQFATDPVCSGS*ACRKDFFPYAKTFE
Trigger: TTCAAATGTTTTGGCATATGGAAAGAAATCCTTTCGGCATGCTCAGGAACCACTGCAGACAGGGTCTGTTGCAAATTGGAAAGCTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 90 bp CACTTGGAGGAGTGGACATGTGTGTTGGTTAATTTTATGTCCATTTaGCACAAACTAGAGTCATTTGAGAAGAGGGAATCTCAATTGAGA +
Preference number: 1 (lower is better)
Translates to: HLEEWTCVLVNFMSI*HKLESFEKRESQLR
Trigger: TCTCAATTGAGATTCCCTCTTCTCAAATGACTCTAGTTTGTGTCAAATGGACATAAAATTAACCAACACACATGTCCACTCCTCCAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 90 bp AAAATATTACATTACTTTGGCATCTTACATTGTGTTGAAGACAACTaGGCTAGTAGATATCAAGGAGGCTCCAGAGAAAACCTCTCCTGC +
Preference number: 1 (lower is better)
Translates to: KILHYFGILHCVEDN*ASRYQGGSRENLSC
Trigger: GCAGGAGAGGTTTTCTCTGGAGCCTCCTTGATATCTACTAGCTCAGTTGTCTTCAACACAATGTAAGATGCCAAAGTAATGTAATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTGTAAGTCCAGCTCCTTaGGGGAGGTCCCCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPVSPAP*GRSPPW
Trigger: CCAAGGAGGGGACCTCCCCCAAGGAGCTGGACTTAC...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CAA 90 bp TGCATACATGGTCAGGGTTGCATAGCACCGAGGGTTCCTCAGAAATaGGCTGTCACACTTCAGCCAGTGATGACAGGGGAGCTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: CIHGQGCIAPRVPQK*AVTLQPVMTGELSQ
Trigger: CTGGCTCAGCTCCCCTGTCATCACTGGCTGAAGTGTGACAGCCAATTTCTGAGGAACCCTCGGTGCTATGCAACCCTGACCATGTATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTGCCCTGAGGCAGTTCTaGACTCCAGATGTGCACCTT +
Preference number: 2 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRALRQF*TPDVHL
Trigger: AAGGTGCACATCTGGAGTTCAGAACTGCCTCAGGGC...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTGTCTGCAGTGGTTCCTaGGCATGCCGAAAGGATTTC +
Preference number: 2 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPVCSGS*ACRKDF
Trigger: GAAATCCTTTCGGCATGCTCAGGAACCACTGCAGAC...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTGTCTGCAGTGGTTCCTaGGCATGCCGAAAGGATTTC +
Preference number: 2 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGVCSGS*ACRKDF
Trigger: GAAATCCTTTCGGCATGCTCAGGAACCACTGCAGAC...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTCTTCTGGCTTCCCAATaGGCTCCGAGTTCAAGTTTC +
Preference number: 2 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPLLASQ*APSSSF
Trigger: GAAACTTGAACTCGGAGCCCATTGGGAAGCCAGAAG...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR GCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTTTCTACTTCAGCTCCTaGCTCCAGGTTCTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPFYFSS*LQVLAL
Trigger: CAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAA...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTGCTAGAGAACAGAAATaGATGAACACCCAGGAGCAA +
Preference number: 2 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPAREQK*MNTQEQ
Trigger: TTGCTCCTGGGTGTTCATTCATTTCTGTTCTCTAGC...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTGAACATCAACAAGGGTaGTTTGTTCAGACTGCAGGT +
Preference number: 2 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPEHQQG*FVQTAG
Trigger: ACCTGCAGTCTGAACAAATCACCCTTGTTGATGTTC...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTGTAAGTCCAGCTCCTTaGGGGAGGTCCCCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTVSPAP*GRSPPW
Trigger: CCAAGGAGGGGACCTCCCCCAAGGAGCTGGACTTAC...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTATCTTTAGGCACAGCTaGGGAAACAACAATACAGTC +
Preference number: 2 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPIFRHS*GNNNTV
Trigger: GACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGAT...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTGAACATCAACAAGGGTaGTTTGTTCAGACTGCAGGT +
Preference number: 2 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPEHQQG*FVQTAG
Trigger: ACCTGCAGTCTGAACAAATCACCCTTGTTGATGTTC...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR GCA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGGCTGAGCCAGGAAACTaGTTCCTGTCCACCAGGAAG +
Preference number: 2 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQAEPGN*FLSTRK
Trigger: CTTCCTGGTGGACAGGAAGCAGTTTCCTGGCTCAGC...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACGTCTCTCTGGAGAGGTaGGGATTTCAAACTTACTTT +
Preference number: 2 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYVSLER*GFQTYF
Trigger: AAAGTAAGTTTGAAATCCCCACCTCTCCAGAGAGAC...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTGCTTCAAGTCTCTCTaGAGAGGTGGGGATTTCAAA +
Preference number: 2 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGCFKSL*RGGDFK
Trigger: TTTGAAATCCCCACCTCTCCAGAGAGACTTGAAGCA...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTGTAATCACCTGTTCATaGTGTGTGTACAGAACACAC +
Preference number: 2 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPVITCS*CVYRTH
Trigger: GTGTGTTCTGTACACACACCATGAACAGGTGATTAC...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTGTCTCCAGAGGTCAATaGATTCTTTTAGGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPVSRGQ*ILLGCK
Trigger: TTTGCAGCCTAAAAGAATTCATTGACCTCTGGAGAC...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGGGAGTTCTGGTAGCCTaGAGCACCAAGGATAACCAC +
Preference number: 2 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQGVLVA*STKDNH
Trigger: GTGGTTATCCTTGGTGCTTCAGGCTACCAGAACTCC...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACATATGCCAAAACATTTaGATGCATCCTCAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYICQNI*MHPQRA
Trigger: TGCCCTTTGAGGATGCATTCAAATGTTTTGGCATAT...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTATATGCCAAAACATTTaGATGCATCCTCAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPICQNI*MHPQRA
Trigger: TGCCCTTTGAGGATGCATTCAAATGTTTTGGCATAT...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGAGGGTTCCTCAGAAATTaGCTGTCACACTTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRGFLRN*LSHFSQ
Trigger: CTGGCTGAAGTGTGACAGCCAATTTCTGAGGAACCC...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCCACGACTTGCCTTTaGTCAAGTGTTTTATCACAG +
Preference number: 2 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGSTTCL*SSVLSQ
Trigger: CTGTGATAAAACACTTGACCAAAGGCAAGTCGTGGA...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTAATAACCTGACTGTCTaGCAGTATCTGTTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPNNLTV*QYLLVL
Trigger: TAAAACCAACAGATACTGTCAGACAGTCAGGTTATT...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTATGGTGATGAACATCTaGAGAGAACAGTTAAGACAC +
Preference number: 2 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPMVMNI*REQLRH
Trigger: GTGTCTTAACTGTTCTCTTCAGATGTTCATCACCAT...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCTGGGCAAGCAGTCTTTaGTGGAATAAGAAAACAGCT +
Preference number: 2 (lower is better)
Translates to: QYELTSTPRARVPSCICSWASSL*WNKKTA
Trigger: AGCTGTTTTCTTATTCCATCAAAGACTGCTTGCCCA...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR GCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTGCAAATTCTTCTTCTTaGTTCAAGTCTCTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGANSSS*FKSLWR
Trigger: TCTCCAGAGAGACTTGAAGCAAGAAGAAGAATTTGC...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTCTAGTCGGCCATCAGTaGGAAGAGAGACCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTLVGHQ*EERPLG
Trigger: ACCAAGAGGTCTCTCTTCCCACTGATGGCCGACTAG...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACGCCCTGAGGCAGTTCTaGACTCCAGATGTGCACCTT +
Preference number: 2 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNALRQF*TPDVHL
Trigger: AAGGTGCACATCTGGAGTTCAGAACTGCCTCAGGGC...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR GCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACGCTGAGCCAGGAAACTaGTTCCTGTCCACCAGGAAG +
Preference number: 2 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNAEPGN*FLSTRK
Trigger: CTTCCTGGTGGACAGGAAGCAGTTTCCTGGCTCAGC...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTAAACTTACTTTTCCCTaGGCCATCTTTAGGCACAGC +
Preference number: 2 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCKLTFP*AIFRHS
Trigger: GCTGTGCCTAAAGATGGCCCAGGGAAAAGTAAGTTT...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGAGTCTCCAGAGGTCAATaGATTCTTTTAGGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRVSRGQ*ILLGCK
Trigger: TTTGCAGCCTAAAAGAATTCATTGACCTCTGGAGAC...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGATGGGCAAGCAGTCTTTaGTGGAATAAGAAAACAGCT +
Preference number: 2 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRWASSL*WNKKTA
Trigger: AGCTGTTTTCTTATTCCATCAAAGACTGCTTGCCCA...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGACTATGTGACTTCTTTTaGAGTTCTGGTAGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRLCDFF*SSGSLK
Trigger: CTTCAGGCTACCAGAACTCCAAAAGAAGTCACATAG...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATCCTCTCCTGCACAGATaGATGCTGCCTACCTCAACC +
Preference number: 2 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNPLLHR*MLPTST
Trigger: GGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGG...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTGCTAGAGAACAGAAATaGATGAACACCCAGGAGCAA +
Preference number: 2 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTAREQK*MNTQEQ
Trigger: TTGCTCCTGGGTGTTCATTCATTTCTGTTCTCTAGC...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTATGTGACTTCTTTTaGAGTTCTGGTAGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQLCDFF*SSGSLK
Trigger: CTTCAGGCTACCAGAACTCCAAAAGAAGTCACATAG...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR GCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAATCTGAACTCCAGATGTaGACCTTGTCTCCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: FFPYAKTFECILKGHGDESELQM*TLSPEV
Trigger: GACCTCTGGAGACAAGGTGCACATCTGGAGTTCAGA...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR GCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACACTTATAAACTTTATATaGCCCAGTACAGGGGAACGC +
Preference number: 2 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTLINFI*PSTGER
Trigger: GCGTTCCCCTGTACTGGGGCATATAAAGTTTATAAG...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR GCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATGCTCGTGTCCCCAGCTaGATATGTAGCAGAAGAATG +
Preference number: 2 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNARVPS*ICSRRM
Trigger: CATTCTTCTGCTACATATGCAGCTGGGGACACGAGC...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR GCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATTGCACAGATGGATGCTaGCTACCTCAACCCTACCAA +
Preference number: 2 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNCTDGC*LPQPYQ
Trigger: TTGGTAGGGTTGAGGTAGGCAGCATCCATCTGTGCA...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAAAAACTTACTTTTCCCTaGGCCATCTTTAGGCACAGC +
Preference number: 2 (lower is better)
Translates to: PQPYQINFSAPVPTCLIEKLTFP*AIFRHS
Trigger: GCTGTGCCTAAAGATGGCCCAGGGAAAAGTAAGTTT...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAGTAATCACCTGTTCATaGTGTGTGTACAGAACACAC +
Preference number: 2 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTVITCS*CVYRTH
Trigger: GTGTGTTCTGTACACACACCATGAACAGGTGATTAC...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAAATCTTTAGGCACAGCTaGGGAAACAACAATACAGTC +
Preference number: 2 (lower is better)
Translates to: PQPYQINFSAPVPTCLIEIFRHS*GNNNTV
Trigger: GACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGAT...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACAACAAGTGCATACATaGTCAGGGTTGCATAGCACC +
Preference number: 2 (lower is better)
Translates to: FFPYAKTFECILKGHGDEQQVHT*SGLHST
Trigger: GGTGCTATGCAACCCTGACCATGTATGCACTTGTTG...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACTGCTTCAAGTCTCTCTaGAGAGGTGGGGATTTCAAA +
Preference number: 2 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNCFKSL*RGGDFK
Trigger: TTTGAAATCCCCACCTCTCCAGAGAGACTTGAAGCA...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAATCCACGACTTGCCTTTaGTCAAGTGTTTTATCACAG +
Preference number: 2 (lower is better)
Translates to: PQPYQINFSAPVPTCLIESTTCL*SSVLSQ
Trigger: CTGTGATAAAACACTTGACCAAAGGCAAGTCGTGGA...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTTTATCCCCAAATTCTTaGCATTCACACACACACACA +
Preference number: 2 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTLSPNS*HSHTHT
Trigger: TGTGTGTGTGTGTGAATGCCAAGAATTTGGGGATAA...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAAAATAACCTGACTGTCTaGCAGTATCTGTTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: PQPYQINFSAPVPTCLIENNLTV*QYLLVL
Trigger: TAAAACCAACAGATACTGTCAGACAGTCAGGTTATT...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR GCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACGCAAATTCTTCTTCTTaGTTCAAGTCTCTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNANSSS*FKSLWR
Trigger: TCTCCAGAGAGACTTGAAGCAAGAAGAAGAATTTGC...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAAGTCTCTCTGGAGAGGTaGGGATTTCAAACTTACTTT +
Preference number: 2 (lower is better)
Translates to: FFPYAKTFECILKGHGDEVSLER*GFQTYF
Trigger: AAAGTAAGTTTGAAATCCCCACCTCTCCAGAGAGAC...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR TCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATGAGAGAAGAAGGATTTaGAATGTTTCAAGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNERRRI*NVSRLL
Trigger: CAGAAGCCTTGAAACATTTCAAATCCTTCTTCTCTC...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCACCAGCATGAGGAACTaGAAGGGGTTCAGGCCACAG +
Preference number: 3 (lower is better)
Translates to: QYELTSTPRARVPSCICSTSMRN*KGFRPQ
Trigger: CTGTGGCCTGAACCCCTTCAAGTTCCTCATGCTGGT...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGATTCTTCAGCACCAGCTaGTTCATAGAGGGCCCTGAC +
Preference number: 3 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRFFSTS*FIEGPD
Trigger: GTCAGGGCCCTCTATGAACAAGCTGGTGCTGAAGAA...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 72 bp GCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTaGGTTCCCTCCGTGATTGAGTGTGAACTGAGAGTT +
Preference number: 3 (lower is better)
Translates to: ASTSAPASRFLL*VPSVIECELRV
Trigger: AACTCTCAGTTCACACTCAATCACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 72 bp CACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTaGAACAGACCCTGTCTGCAGTGGTTCCTGAGCATG +
Preference number: 3 (lower is better)
Translates to: HRNPPKEVSFPI*NRPCLQWFLSM
Trigger: CATGCTCAGGAACCACTGCAGACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 72 bp TGGGAAGAGAGACCTCTTGGTCTTATAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAGAAGTG +
Preference number: 3 (lower is better)
Translates to: WEERPLGLINFI*PSTGERQGQEV
Trigger: CACTTCTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTATAAGACCAAGAGGTCTCTCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 72 bp AGTAGATATCAAGGAGGCTCCAGAGAAAACCTCTCCTaGACAGATGGATGCTGCCTACCTCAACCCTACCAA +
Preference number: 3 (lower is better)
Translates to: SRYQGGSRENLS*TDGCCLPQPYQ
Trigger: TTGGTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTCCTTGATATCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 72 bp CATCCGTCCATCCATCAGTCGGTGTCTTCAGCCAAGTaGAGAACATCAACAAGGGTGATTTGTTCAGACTGC +
Preference number: 3 (lower is better)
Translates to: HPSIHQSVSSAK*RTSTRVICSDC
Trigger: GCAGTCTGAACAAATCACCCTTGTTGATGTTCTCCACTTGGCTGAAGACACCGACTGATGGATGGACGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 72 bp TGGCCTAGTCGGCCATCAGTGGGAAGAGAGACCTCTTaGTCTTATAAACTTTATATGCCCCAGTACAGGGGA +
Preference number: 3 (lower is better)
Translates to: WPSRPSVGRETS*SYKLYMPQYRG
Trigger: TCCCCTGTACTGGGGCATATAAAGTTTATAAGACCAAGAGGTCTCTCTTCCCACTGATGGCCGACTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 72 bp TGGCAAATACAGAAGTGGATGCTCATAGTCATCTATTaGATGGAACACAGGGCCCCCAGTGGAGGAGCTAGA +
Preference number: 3 (lower is better)
Translates to: WQIQKWMLIVIY*MEHRAPSGGAR
Trigger: TCTAGCTCCTCCACTGGGGGCCCTGTGTTCCATCCAATAGATGACTATGAGCATCCACTTCTGTATTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 72 bp TCAAGGAGGCTCCAGAGAAAACCTCTCCTGCACAGATaGATGCTGCCTACCTCAACCCTACCAAATCAACTT +
Preference number: 3 (lower is better)
Translates to: SRRLQRKPLLHR*MLPTSTLPNQL
Trigger: AAGTTGATTTGGTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTCATATGCCAAAACATTaGAATGCATCCTCAAAGGGC +
Preference number: 3 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGHMPKH*NASSKG
Trigger: GCCCTTTGAGGATGCATTCAAATGTTTTGGCATATG...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 72 bp CACACACACACACACACACACACACACACAAAGGCATaGCTGACACAGGTCCCAATGTACATGGTAGTGAAC +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHTKA*LTQVPMYMVVN
Trigger: GTTCACTACCATGTACATTGGGACCTGTGTCAGTCATGCCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 72 bp CCCTCCGTGATTGAGTGTGAACTGAGAGTTGTAAGCTaGATTAAACCCCTCTCTCCACGACTTGCCTTTGGT +
Preference number: 3 (lower is better)
Translates to: PSVIECELRVVS*IKPLSPRLAFG
Trigger: ACCAAAGGCAAGTCGTGGAGAGAGGGGTTTAATTCAGCTTACAACTCTCAGTTCACACTCAATCACGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACAGAGAGAAGAAGGATTaGAAATGTTTCAAGGCTTCT +
Preference number: 3 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYREKKD*KCFKAS
Trigger: AGAAGCCTTGAAACATTTCAAATCCTTCTTCTCTCT...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGAGGGTTCCTCAGAAATaGGCTGTCACACTTCAGCCA +
Preference number: 3 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQRVPQK*AVTLQP
Trigger: TGGCTGAAGTGTGACAGCCAATTTCTGAGGAACCCT...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCTGCAAATTCTTCTTCTaGCTTCAAGTCTCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: QYELTSTPRARVPSCICSCKFFF*LQVSLE
Trigger: CTCCAGAGAGACTTGAAGCAAGAAGAAGAATTTGCA...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTTTCTTCAGCACCAGCTaGTTCATAGAGGGCCCTGAC +
Preference number: 3 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTFFSTS*FIEGPD
Trigger: GTCAGGGCCCTCTATGAACAAGCTGGTGCTGAAGAA...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAAGGGTTCCTCAGAAATaGGCTGTCACACTTCAGCCA +
Preference number: 3 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTRVPQK*AVTLQP
Trigger: TGGCTGAAGTGTGACAGCCAATTTCTGAGGAACCCT...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTCTCCAGATGTGCACCTaGTCTCCAGAGGTCAATGAA +
Preference number: 3 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTLQMCT*SPEVNE
Trigger: TTCATTGACCTCTGGAGACAAGGTGCACATCTGGAG...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 72 bp GTCAGCTTTCCAATTTGCAACAGACCCTGTCTGCAGTaGTTCCTGAGCATGCCGAAAGGATTTCTTTCCATA +
Preference number: 3 (lower is better)
Translates to: VSFPICNRPCLQ*FLSMPKGFLSI
Trigger: TATGGAAAGAAATCCTTTCGGCATGCTCAGGAACCACTGCAGACAGGGTCTGTTGCAAATTGGAAAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 72 bp TTCCAATTTGCAACAGACCCTGTCTGCAGTGGTTCCTaGGCATGCCGAAAGGATTTCTTTCCATATGCCAAA +
Preference number: 3 (lower is better)
Translates to: FQFATDPVCSGS*ACRKDFFPYAK
Trigger: TTTGGCATATGGAAAGAAATCCTTTCGGCATGCTCAGGAACCACTGCAGACAGGGTCTGTTGCAAATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 72 bp ACACACACACACACACACACACACACACACTACATGTaGCTCTTGTTCTGGGTCATGATCACTAGAAGAGAG +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTHYM*LLFWVMITRRE
Trigger: CTCTCTTCTAGTGATCATGACCCAGAACAAGAGTCACATGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 72 bp AAGCTTCCTTTCCAGGAAAGAGGTAAAATCAACAAGTaGATACATGGTCAGGGTTGCATAGCACCGAGGGTT +
Preference number: 3 (lower is better)
Translates to: KLPFQERGKINK*IHGQGCIAPRV
Trigger: AACCCTCGGTGCTATGCAACCCTGACCATGTATGCACTTGTTGATTTTACCTCTTTCCTGGAAAGGAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACCTCCAGATGTGCACCTaGTCTCCAGAGGTCAATGAA +
Preference number: 3 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNLQMCT*SPEVNE
Trigger: TTCATTGACCTCTGGAGACAAGGTGCACATCTGGAG...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 72 bp GATGAACATCTGAAGAGAACAGTTAAGACACAGTATTaGAGTTCAAAGAAGGCTCACCTAGTGCCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: DEHLKRTVKTQY*SSKKAHLVPRR
Trigger: TCTCCTGGGCACTAGGTGAGCCTTCTTTGAACTGCAATACTGTGTCTTAACTGTTCTCTTCAGATGTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CCA 72 bp GAGAGAGAAGAAGGATTTGAAATGTTTCAAGGCTTCTaGCTTCCCAATGGGCTCCGAGTTCAAGTTTCAGAA +
Preference number: 3 (lower is better)
Translates to: EREEGFEMFQGF*LPNGLRVQVSE
Trigger: TTCTGAAACTTGAACTCGGAGCCCATTGGGAAGCCAGAAGCCTTGAAACATTTCAAATCCTTCTTCTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAGCATCTTACATTGTGTaGAAGACAACTGAGCTAGTA +
Preference number: 3 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTASYIV*KTTELV
Trigger: TACTAGCTCAGTTGTCTTCAACACAATGTAAGATGC...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTGAGTGGACATGTGTGTaGGTTAATTTTATGTCCATT +
Preference number: 3 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTEWTCV*VNFMSI
Trigger: AATGGACATAAAATTAACCAACACACATGTCCACTC...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAAAGAGAGAAGAAGGATTaGAAATGTTTCAAGGCTTCT +
Preference number: 3 (lower is better)
Translates to: PQPYQINFSAPVPTCLIEREKKD*KCFKAS
Trigger: AGAAGCCTTGAAACATTTCAAATCCTTCTTCTCTCT...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR-3UTR CAA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATTGCACCAGTACCAACTaGCCTAATAGAAGGAATAGA +
Preference number: 3 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNCTSTN*PNRRNR
Trigger: TCTATTCCTTCTATTAGGCAAGTTGGTACTGGTGCA...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 72 bp CATTACTTTGGCATCTTACATTGTGTTGAAGACAACTaGGCTAGTAGATATCAAGGAGGCTCCAGAGAAAAC +
Preference number: 3 (lower is better)
Translates to: HYFGILHCVEDN*ASRYQGGSREN
Trigger: GTTTTCTCTGGAGCCTCCTTGATATCTACTAGCTCAGTTGTCTTCAACACAATGTAAGATGCCAAAGTAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 72 bp CGAAAGGATTTCTTTCCATATGCCAAAACATTTGAATaGATCCTCAAAGGGCATGGTGATGAACATCTGAAG +
Preference number: 3 (lower is better)
Translates to: RKDFFPYAKTFE*ILKGHGDEHLK
Trigger: CTTCAGATGTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAAATCCTTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR GCA 72 bp GTTAAAGAAAACATAATACATGGGAATGGACAAAGATaGTTGCCCCTCTATGTCATCAGGGAACTGCTAAAC +
Preference number: 3 (lower is better)
Translates to: VKENIIHGNGQR*LPLYVIRELLN
Trigger: GTTTAGCAGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATGTTTTCTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR TCA 72 bp CTCTTGTTCTGGGTCATGATCACTAGAAGAGAGTTCTaGGTTCTTGATATTCCTTCAAACAAAAATATTACA +
Preference number: 3 (lower is better)
Translates to: LLFWVMITRREF*VLDIPSNKNIT
Trigger: TGTAATATTTTTGTTTGAAGGAATATCAAGAACTCAGAACTCTCTTCTAGTGATCATGACCCAGAACAAGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACAGGGGTGGGCAGCTGTaGAGGCGCAGGTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYRGGQL*RRRWRL
Trigger: GAGCCGCCACCTGCGCCTCCACAGCTGCCCACCCCT...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACCCTGGGGCCCCCTCATaGCCACTTCTCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYPGAPS*PLLQAA
Trigger: GGCTGCCTGGAGAAGTGGGCATGAGGGGGCCCCAGG...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACCATCCTGGCCAGCTaGTCCCTGGGGGCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPTILAS*SLGAGE
Trigger: TTCCCCGGCCCCCAGGGACCAGCTGGCCAGGATGGT...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACCCAGGGTCTCCAGGCTaGCCCTTCCCACCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYPGSPG*PFPPGG
Trigger: ACCACCAGGTGGGAAGGGTCAGCCTGGAGACCCTGG...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTGGTCCGGGGGCTCCCTaGTCTCCCTTCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRGPGAP*SPFRPS
Trigger: GGAAGGCCTGAAGGGAGAGCAGGGAGCCCCCGGACC...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTCACACCAGGGGGTCCTaGAGGCCCCACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPHTRGS*RPHISL
Trigger: AAGGGAGATGTGGGGCCTGCAGGACCCCCTGGTGTG...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCGGTCCGGGGGCTCCCTaGTCTCCCTTCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSGPGAP*SPFRPS
Trigger: GGAAGGCCTGAAGGGAGAGCAGGGAGCCCCCGGACC...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTCCAGGTGTCCCCGCATaGCCAGCAGGCCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPPGVPA*PAGPGF
Trigger: AAAACCTGGGCCTGCTGGGCATGCGGGGACACCTGG...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACTGGCCCCGCCACACCTaGATTCCCATCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYWPRHT*IPICSW
Trigger: CCAGGAGCAGATGGGAATGCAGGTGTGGCGGGGCCA...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACCTGTGGAGGCGCAGGTaGCGGCTCTGTCACCACAGT +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYLWRRR*RLCHHS
Trigger: ACTGTGGTGACAGAGCCGCCACCTGCGCCTCCACAG...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTGCCTTGGTGACCTCTTaGTCCGGGGGCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRALVTS*SGGSLL
Trigger: GAGCAGGGAGCCCCCGGACCAAGAGGTCACCAAGGC...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTGGGTCCTGCAGGTCCTaGAGCACCAGGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPGSCRS*STRVSS
Trigger: GCTGGAAACCCTGGTGCTCCAGGACCTGCAGGACCC...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTTGGACCAGCTGGCCCTaGGCTGCCTTCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPWTSWP*AAFFPC
Trigger: GCAGGGGAAGAAGGCAGCCCAGGGCCAGCTGGTCCA...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTACCAGGATCTCCCCGTaGACCAGCTGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGTRISP*TSWPWA
Trigger: AGCCCAGGGCCAGCTGGTCCACGGGGAGATCCTGGT...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACTCCCTTGAAGCCCGGTaGACCTCTGGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYSLEAR*TSGSLC
Trigger: GCAGAGGGAGCCAGAGGTCCACCGGGCTTCAAGGGA...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTTGGCCAGGACGGCCTaGCTCACCCATGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGLARTA*LTHGAC
Trigger: ACAGGCCCCATGGGTGAGCCAGGCCGTCCTGGCCAA...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTATCTCCTGGTCGTCCTaGGGGACCAGGTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGISWSS*GTRWTS
Trigger: GCTGGTCCACCTGGTCCCTCAGGACGACCAGGAGAT...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTCACCTGTGTGTCCCTTaGAGCCCGGTGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGHLCVP*SPVDLW
Trigger: CCAGAGGTCCACCGGGCTTCAAGGGACACACAGGTG...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCACACCAGGGGGTCCTaGAGGCCCCACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPHTRGS*RPHISL
Trigger: AAGGGAGATGTGGGGCCTGCAGGACCCCCTGGTGTG...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTCCAGGTGTCCCCGCATaGCCAGCAGGCCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRPGVPA*PAGPGF
Trigger: AAAACCTGGGCCTGCTGGGCATGCGGGGACACCTGG...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTCTGGGTCACCACGGCTaGCAGGAGAGCCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGLGHHG*QESQES
Trigger: GGATTCCTGGCTCTCCTGGCAGCCGTGGTGACCCAG...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACCTCCTGGTTCTCCCTTaGAGCCAGGAAGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYLLVLP*SQEGLV
Trigger: CACCAGGCCTTCCTGGCTCCAAGGGAGAACCAGGAG...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCTCCAGGATGGCCCTGTaGTCCCAGGGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSSRMAL*SQGSRL
Trigger: GAGCCTGGAGCCCTGGGACCACAGGGCCATCCTGGA...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCACCAGGATCTCCCCGTaGACCAGCTGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSTRISP*TSWPWA
Trigger: AGCCCAGGGCCAGCTGGTCCACGGGGAGATCCTGGT...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTCTTGCCCTTTCCTGGTaGCCCTGGGAGACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRLALSW*PWETRS
Trigger: GCTCCTGGTCTCCCAGGGCCACCAGGAAAGGGCAAG...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTAGCAACCCCAATGCCTaGGTCACCACGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGSNPNA*VTTAAR
Trigger: CCTGGCAGCCGTGGTGACCCAGGCATTGGGGTTGCT...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACGTCCCCTTGTTCCTCTaGGACCCTGTGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYVPLFL*DPVVQQ
Trigger: CTGCTGGACCACAGGGTCCCAGAGGAACAAGGGGAC...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTCCTTCCAGACCACCTTaGCCAGGACGGCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRPSRPP*PGRPGS
Trigger: TGAGCCAGGCCGTCCTGGCCAAGGTGGTCTGGAAGG...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGACACGATTCCCAGGTCTaGCGCCGGCCTGGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRHDSQV*RRPGRR
Trigger: TCTCCGCCCAGGCCGGCGGCAGACCTGGGAATCGTG...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCGACCAGCAACCCCAATaGCTGGGTCACCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSDQQPQ*LGHHGC
Trigger: GCAGCCGTGGTGACCCAGGCATTGGGGTTGCTGGTC...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACTCCCACCTCACCCTCTaGACCACGTTCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYSHLTL*TTFSLA
Trigger: AGCCAAGGAGAACGTGGTGCAGAGGGTGAGGTGGGA...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACAGCTCCTACCTCTCCTaGTTCTCCTGGAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYSSYLS*FSWRST
Trigger: CGTGGACCTCCAGGAGAAGCAGGAGAGGTAGGAGCT...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACGACCAACTCCAGGTGTaGCAGGGTCACCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYDQLQV*QGHLWL
Trigger: GAGCCAAAGGTGACCCTGGCACACCTGGAGTTGGTC...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTGGTCTGCCGCCGGCCTaGGCGGAGAAGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTGLPPA*AEKLRL
Trigger: CAGCCGCAGCTTCTCCGCCCAGGCCGGCGGCAGACC...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGAACCATCCTGGCCAGCTaGTCCCTGGGGGCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRTILAS*SLGAGE
Trigger: TTCCCCGGCCCCCAGGGACCAGCTGGCCAGGATGGT...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTGCACCACGTTCTCCTTaGCTTCCCTGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPAPRSP*LPCGPA
Trigger: AGCTGGACCACAGGGAAGCCAAGGAGAACGTGGTGC...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTTGGGCCCATGAAGCCTaGAACTCCAGGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRWAHEA*NSRVTL
Trigger: CAGGGTCACCCTGGAGTTCCAGGCTTCATGGGCCCA...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTGGGCCCATGAAGCCTaGAACTCCAGGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGWAHEA*NSRVTL
Trigger: CAGGGTCACCCTGGAGTTCCAGGCTTCATGGGCCCA...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACATGCCAGATGGACCTTaGGGACCAGGAGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYMPDGP*GPGGPS
Trigger: AGAAGGCCCTCCTGGTCCCCAAGGTCCATCTGGCAT...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCCCTTCCAGACCACCTTaGCCAGGACGGCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSPSRPP*PGRPGS
Trigger: TGAGCCAGGCCGTCCTGGCCAAGGTGGTCTGGAAGG...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp ACTGACACAGGTCCCAATGTACATGGTAGTGAACCACCCACAAGTAAGTCAAGCTCCCCGGTGGGCCCATaGAGCCTGGAACTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TDTGPNVHGSEPPTSKSSSPVGP*SLELQG
Trigger: ACCCTGGAGTTCCAGGCTTCATGGGCCCACCGGGGA...GCTTGACTTACTTGTGGGTGGTTCACTACCATGTACATTGGGACCTGTGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTCTCTCATGCCTTTACTaGCGTCTCTTCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRLSCLY*RLFQGA
Trigger: GGCCCCCTGGAAGAGACGGCAGTAAAGGCATGAGAG...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTTCCAGGAGGTCCTTGTaGACCATCATGCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPSRRSL*TIMPLG
Trigger: GCCAAGGGGCATGATGGTGCACAAGGACCTCCTGGA...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCCAGGAGGTCCTTGTaGACCATCATGCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGSRRSL*TIMPLG
Trigger: GCCAAGGGGCATGATGGTGCACAAGGACCTCCTGGA...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTTCCCACCTCACCCTCTaGACCACGTTCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRSHLTL*TTFSLA
Trigger: AGCCAAGGAGAACGTGGTGCAGAGGGTGAGGTGGGA...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTCATCTCTGCCCTGCTTaGCTTCTTCTCCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPHLCPA*LLLLGL
Trigger: GAGTCCCAGGAGAAGAAGGCAAGCAGGGCAGAGATG...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTCCAAAGGATTCCCTCTaGGGACAGCCATGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGPKDSL*GQPWLS
Trigger: GGAGAGCCATGGCTGTCCCCAGAGGGAATCCTTTGG...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGACTGCACCACAGAGCCTaGCACACCAGGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRLHHRA*HTRGSC
Trigger: GCAGGACCCCCTGGTGTGCCAGGCTCTGTGGTGCAG...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTGCCTTGGTGACCTCTTaGTCCGGGGGCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCALVTS*SGGSLL
Trigger: GAGCAGGGAGCCCCCGGACCAAGAGGTCACCAAGGC...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCACCCTGGAACACCGGGTaGTCCAGGCGGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQAPWNTG*SRRALW
Trigger: CCACAGGGCCCGCCTGGACCACCCGGTGTTCCAGGG...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCGTCCCCTTGTTCCTCTaGGACCCTGTGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSVPLFL*DPVVQQ
Trigger: CTGCTGGACCACAGGGTCCCAGAGGAACAAGGGGAC...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCAGGTTCCCCAGGTTaGCCTGGTATTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPPGSPG*PGIPGG
Trigger: TCCTCCTGGAATACCAGGCCAACCTGGGGAACCTGG...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CAA 72 bp GGTCAGGGTTGCATAGCACCGAGGGTTCCTCAGAAATaGGCTGTCACACTTCAGCCAGTGATGACAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GQGCIAPRVPQK*AVTLQPVMTGE
Trigger: CTCCCCTGTCATCACTGGCTGAAGTGTGACAGCCAATTTCTGAGGAACCCTCGGTGCTATGCAACCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTCCTTTTCCCCATGGATaGATGGTCCTCGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPPFPHG*MVLVHC
Trigger: ACAGTGGACGAGGACCATTCATCCATGGGGAAAAGG...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR TCA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTCACCTGTGTGTCCCTTaGAGCCCGGTGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCHLCVP*SPVDLW
Trigger: CCAGAGGTCCACCGGGCTTCAAGGGACACACAGGTG...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GGCTTCTGGCTTCCCAATGGGCTCCGAGTTCAAGTTTCAGAAATCCATAGTAGTTCCTGGAGATCCAGGTaGTCCACTGCTGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GFWLPNGLRVQVSEIHSSSWRSR*STAARW
Trigger: CCACCGGGCAGCAGTGGATCACCTGGATCTCCAGGA...ACTACTATGGATTTCTGAAACTTGAACTCGGAGCCCATTGGGAAGCCAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCAGGCTGCATGGGCAGCTaGTGCAGCATCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPGCMGS*CSIQHQ
Trigger: CTGGTGCTGGATGCTGCAGCAGCTGCCCATGCAGCC...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTTCTCCTTTAGGCCCTTaGTCTCCTGGCATTCTTGGG +
Preference number: 4 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPSPLGP*SPGILG
Trigger: CCCAAGAATGCCAGGAGAGCAAGGGCCTAAAGGAGA...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGAGACCAGCAACCCCAATaGCTGGGTCACCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRDQQPQ*LGHHGC
Trigger: GCAGCCGTGGTGACCCAGGCATTGGGGTTGCTGGTC...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCATCTCTGCCCTGCTTaGCTTCTTCTCCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPHLCPA*LLLLGL
Trigger: GAGTCCCAGGAGAAGAAGGCAAGCAGGGCAGAGATG...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTCCTGCACGTTGGGCCTaGCAGCCACCATCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTPARWA*QPPSPP
Trigger: GGGAGGGGATGGTGGCTGCCAGGCCCAACGTGCAGG...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCGGATGCCGGCTGCATaGGCAGCTGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQRMPAA*AAAAAS
Trigger: GGATGCTGCAGCAGCTGCCCATGCAGCCGGCATCCG...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTTCCATCTCTGCCTTCTaGGCCAATCAAACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPSISAF*ANQTRC
Trigger: GCACCTGGTTTGATTGGCCCAGAAGGCAGAGATGGA...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCAAGGTCCAGGGGGCCCTaGAACACCGGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQARSRGP*NTGWSR
Trigger: CCTGGACCACCCGGTGTTCCAGGGCCCCCTGGACCT...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAAGGTCCAGGGGGCCCTaGAACACCGGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTRSRGP*NTGWSR
Trigger: CCTGGACCACCCGGTGTTCCAGGGCCCCCTGGACCT...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCTTCGCCAGAGTCTCCTaGTTCTCCCTTGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSFARVS*FSLGAR
Trigger: CCTGGCTCCAAGGGAGAACCAGGAGACTCTGGCGAA...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCTTCACCCCGAGGTCCTaGCATTCCAGGTACGCCACT +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSFTPRS*HSRYAT
Trigger: AGTGGCGTACCTGGAATGCCAGGACCTCGGGGTGAA...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGTCCCCGTGGACCAGCTaGCCCTGGGCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQSPWTS*PWAAFF
Trigger: GAAGAAGGCAGCCCAGGGCCAGCTGGTCCACGGGGA...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTAGGCCCTCTTTCTCCTaGGTTTCCTGGTGCACCATC +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGRPSFS*VSWCTI
Trigger: GATGGTGCACCAGGAAACCCAGGAGAAAGAGGGCCT...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCATGCCAGATGGACCTTaGGGACCAGGAGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSMPDGP*GPGGPS
Trigger: AGAAGGCCCTCCTGGTCCCCAAGGTCCATCTGGCAT...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp ACTGACACAGGTCCCAATGTACATGGTAGTGAACCACCCACAAGTAAGTCAAGCGGGGCCTGTCCGACCTaGCAGCCCATCTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TDTGPNVHGSEPPTSKSSGACPT*QPIFSR
Trigger: CCTGGAAAAGATGGGCTGCCAGGTCGGACAGGCCCC...GCTTGACTTACTTGTGGGTGGTTCACTACCATGTACATTGGGACCTGTGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGTTGGCCAGGACGGCCTaGCTCACCCATGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQLARTA*LTHGAC
Trigger: ACAGGCCCCATGGGTGAGCCAGGCCGTCCTGGCCAA...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTCTCCTCTTTCACCTTTaGGGCCCATTGGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGLLFHL*GPLVQR
Trigger: CCTCTGGACCAATGGGCCCCAAAGGTGAAAGAGGAG...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTCTCCTCTTTCACCTTTaGGGCCCATTGGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRLLFHL*GPLVQR
Trigger: CCTCTGGACCAATGGGCCCCAAAGGTGAAAGAGGAG...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACATCCCCGGTGGGCCCATaGAGCCTGGAACTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTSPVGP*SLELQG
Trigger: ACCCTGGAGTTCCAGGCTTCATGGGCCCACCGGGGA...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGTGGCCCCGCCACACCTaGATTCCCATCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQWPRHT*IPICSW
Trigger: CCAGGAGCAGATGGGAATGCAGGTGTGGCGGGGCCA...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTTTCCCCATGGATGAATaGTCCTCGTCCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPFPMDE*SSSTVS
Trigger: GGAGACAGTGGACGAGGACCATTCATCCATGGGGAA...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCAAGTCCAGGAGGTCCCTaGGGCCCCCTCATGCCCACT +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQASPGGP*GPLMPT
Trigger: AGTGGGCATGAGGGGGCCCCAGGGACCTCCTGGACT...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTAGTCCAGGAGGTCCCTaGGGCCCCCTCATGCCCACT +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTSPGGP*GPLMPT
Trigger: AGTGGGCATGAGGGGGCCCCAGGGACCTCCTGGACT...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTTCCATCTCTGCCTTCTaGGCCAATCAAACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRSISAF*ANQTRC
Trigger: GCACCTGGTTTGATTGGCCCAGAAGGCAGAGATGGA...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACCCCTGGAACACCGGGTaGTCCAGGCGGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNPWNTG*SRRALW
Trigger: CCACAGGGCCCGCCTGGACCACCCGGTGTTCCAGGG...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGAGCCAGGGGGACCTGCTaGACCAACCTCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRARGTC*TNLTLF
Trigger: GAAAAGGGTGAGGTTGGTCCAGCAGGTCCCCCTGGC...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCATCCAGGATGGCCCTGTaGTCCCAGGGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQASRMAL*SQGSRL
Trigger: GAGCCTGGAGCCCTGGGACCACAGGGCCATCCTGGA...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTTGCCCTTTCCTGGTaGCCCTGGGAGACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQLALSW*PWETRS
Trigger: GCTCCTGGTCTCCCAGGGCCACCAGGAAAGGGCAAG...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCACCCATCTGCTCCTGGTaGCCCAGGATTCCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQAPICSW*PRIPRW
Trigger: CCACCGGGGAATCCTGGGCCACCAGGAGCAGATGGG...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGATCCTGGGATGCCAGATaGACCTTGGGGACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRSWDAR*TLGTRR
Trigger: CCTCCTGGTCCCCAAGGTCCATCTGGCATCCCAGGA...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCATCCCCTCAGACCAGGTaGGCCAGGATCACCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPSPQTR*ARITCV
Trigger: CACACAGGTGATCCTGGCCCACCTGGTCTGAGGGGA...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCATCCTCTGGGACCCTGTaGTCCAGCAGGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPSSGTL*SSRSSV
Trigger: GACACTGGACCTGCTGGACCACAGGGTCCCAGAGGA...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp ACTGACACAGGTCCCAATGTACATGGTAGTGAACCACCCACAAGTAAGTCAAGCTCCTCTGGGACCCTGTaGTCCAGCAGGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: TDTGPNVHGSEPPTSKSSSSGTL*SSRSSV
Trigger: GACACTGGACCTGCTGGACCACAGGGTCCCAGAGGA...GCTTGACTTACTTGTGGGTGGTTCACTACCATGTACATTGGGACCTGTGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCCCAATGGGCTCCGAGTTCAAGTTTCAGAAATCCATAGTAGTCTCGCCTTTGGATCCTaGCTCTCCAGGCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GFWLPNGLRVQVSEIHSSLAFGS*LSRLPR
Trigger: CCTGGGAAGCCTGGAGAGCCAGGATCCAAAGGCGAG...ACTACTATGGATTTCTGAAACTTGAACTCGGAGCCCATTGGGAAGCCAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCACTCCCCTCTCGCCTTTaGATCCTGGCTCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPLPSRL*ILALQA
Trigger: AGCCTGGAGAGCCAGGATCCAAAGGCGAGAGGGGAG...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTGCCCTTCACATTACTTaGCCGGGCAGCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCALHIT*PGSKAG
Trigger: GCCAGCCTTGCTGCCCGGCCAAGTAATGTGAAGGGC...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTTCTCCAGGAGGGCATaGGCAGTTGATGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGFSRRA*AVDGLQ
Trigger: TTGAAGACCATCAACTGCTCATGCCCTCCTGGAGAA...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR TCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGAGACCCTTGTCCCCTTTaGAACCTGGCAGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRDPCPL*NLADLG
Trigger: TCCCAGGTCTGCCAGGTTTCAAAGGGGACAAGGGTC...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCATCCTGGAGATCCAGGTaGTCCACTGCTGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQASWRSR*STAARW
Trigger: CCACCGGGCAGCAGTGGATCACCTGGATCTCCAGGA...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCACCCATTAGGCCAGTATaGCCCTTGTGGCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPPIRPV*PLWPGV
Trigger: AACCCCAGGCCACAAGGGTCATACTGGCCTAATGGG...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACCCTGGGGCCCCCTCATaGCCACTTCTCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNPGAPS*PLLQAA
Trigger: GGCTGCCTGGAGAAGTGGGCATGAGGGGGCCCCAGG...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTCTGGGTCACCACGGCTaGCAGGAGAGCCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTLGHHG*QESQES
Trigger: GGATTCCTGGCTCTCCTGGCAGCCGTGGTGACCCAG...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp ACTGACACAGGTCCCAATGTACATGGTAGTGAACCACCCACAAGTAAGTCAAGCCAGAGGGTCCTGCTATaGCAGGTTCTCCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TDTGPNVHGSEPPTSKSSQRVLL*QVLPSD
Trigger: GTCTGAGGGGAGAACCTGGCATAGCAGGACCCTCTG...GCTTGACTTACTTGTGGGTGGTTCACTACCATGTACATTGGGACCTGTGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCAGACCAACTCCAGGTGTaGCAGGGTCACCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPDQLQV*QGHLWL
Trigger: GAGCCAAAGGTGACCCTGGCACACCTGGAGTTGGTC...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACGTTCGCTCCCAGGGGTaGGCAGCTGTGGAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNVRSQG*AAVEAQ
Trigger: CTGCGCCTCCACAGCTGCCCACCCCTGGGAGCGAAC...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCCCAATGGGCTCCGAGTTCAAGTTTCAGAAATCCATAGTAGTTTCGCCAGAGTCTCCTaGTTCTCCCTTGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GFWLPNGLRVQVSEIHSSFARVS*FSLGAR
Trigger: CCTGGCTCCAAGGGAGAACCAGGAGACTCTGGCGAA...ACTACTATGGATTTCTGAAACTTGAACTCGGAGCCCATTGGGAAGCCAGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCGTGGCACCTTTCAGACCTaGAAGTCCCAGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: HGFYFSSCLQVLALSSLRGTFQT*KSQFTF
Trigger: AAAGGTGAACTGGGACTTCCAGGTCTGAAAGGTGCC...ACGGAGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTGGCACCTTTCAGACCTaGAAGTCCCAGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGGTFQT*KSQFTF
Trigger: AAAGGTGAACTGGGACTTCCAGGTCTGAAAGGTGCC...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCAAGCAACCCCAATGCCTaGGTCACCACGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQASNPNA*VTTAAR
Trigger: CCTGGCAGCCGTGGTGACCCAGGCATTGGGGTTGCT...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCCCAATGGGCTCCGAGTTCAAGTTTCAGAAATCCATAGTAGTGCACCACGTTCTCCTTaGCTTCCCTGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GFWLPNGLRVQVSEIHSSAPRSP*LPCGPA
Trigger: AGCTGGACCACAGGGAAGCCAAGGAGAACGTGGTGC...ACTACTATGGATTTCTGAAACTTGAACTCGGAGCCCATTGGGAAGCCAGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTACCCTTCCCACCTGGTaGTCCTTTGTCACCTTTGAT +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGTLPTW*SFVTFD
Trigger: ATCAAAGGTGACAAAGGACCACCAGGTGGGAAGGGT...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTGGGGCCTGTCCGACCTaGCAGCCCATCTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTGACPT*QPIFSR
Trigger: CCTGGAAAAGATGGGCTGCCAGGTCGGACAGGCCCC...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTGTCCTTTGTCACCTTTaGTCCCAGGGTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCVLCHL*SQGLPS
Trigger: AGAGGGGAGACCCTGGGATCAAAGGTGACAAAGGAC...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACCCAGGGTCTCCAGGCTaGCCCTTCCCACCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNPGSPG*PFPPGG
Trigger: ACCACCAGGTGGGAAGGGTCAGCCTGGAGACCCTGG...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCACAAGCTCTTCCTGAATaGGGCGCCGTAAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPQALPE*GAVRCP
Trigger: TGGACACCTTACGGCGCCTCATTCAGGAAGAGCTTG...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGGGTCCGGGTCTGCCTTaGGAGGACTTCATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQGPGLP*EDFMCA
Trigger: AGCACACATGAAGTCCTCTCAAGGCAGACCCGGACC...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTGAAACATGGAAGACATaGGCAGACTTGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPETWKT*ADLGSE
Trigger: CTCAGAACCCAAGTCTGCGCATGTCTTCCATGTTTC...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTCAGGAGGGCAGTCGTTaGACACATCCTTTACTAAGA +
Preference number: 4 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGQEGSR*THPLLR
Trigger: TCTTAGTAAAGGATGTGTGCAACGACTGCCCTCCTG...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCTCACCCTTTTCCCCATaGATGAATGGTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSSPFSP*MNGPRP
Trigger: TGGACGAGGACCATTCATCCATGGGGAAAAGGGTGA...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACCTGCACCACAGAGCCTaGCACACCAGGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNLHHRA*HTRGSC
Trigger: GCAGGACCCCCTGGTGTGCCAGGCTCTGTGGTGCAG...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTAGGCCCTTGCTCTCCTaGCATTCTTGGGTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCRPLLS*HSWVWC
Trigger: ACACCACACCCAAGAATGCCAGGAGAGCAAGGGCCT...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTTCTCCCTTGTTTTCCTaGAAGACCCTTGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPSPLFS*KTLVPF
Trigger: AAAGGGGACAAGGGTCTTCCAGGAAAACAAGGGAGA...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACCCCATCTGCTCCTGGTaGCCCAGGATTCCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNPICSW*PRIPRW
Trigger: CCACCGGGGAATCCTGGGCCACCAGGAGCAGATGGG...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGATTCTCCTGGGACTCCTaGGATGCCAGATGGACCTTG +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRFSWDS*DARWTL
Trigger: CAAGGTCCATCTGGCATCCCAGGAGTCCCAGGAGAA...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCACTTGCCTTCTTCTCCTaGGACTCCTGGGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPLAFFS*DSWDAR
Trigger: TCTGGCATCCCAGGAGTCCCAGGAGAAGAAGGCAAG...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp ACTGACACAGGTCCCAATGTACATGGTAGTGAACCACCCACAAGTAAGTCAAGCCTTGCCTTCTTCTCCTaGGACTCCTGGGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: TDTGPNVHGSEPPTSKSSLAFFS*DSWDAR
Trigger: TCTGGCATCCCAGGAGTCCCAGGAGAAGAAGGCAAG...GCTTGACTTACTTGTGGGTGGTTCACTACCATGTACATTGGGACCTGTGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTCTCCCCTCTCGCCTTTaGATCCTGGCTCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTLPSRL*ILALQA
Trigger: AGCCTGGAGAGCCAGGATCCAAAGGCGAGAGGGGAG...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGAGAGGGCATGAGCAGTTaGTGGTCTTCAAGAACCCGA +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYREGMSS*WSSRTR
Trigger: TCGGGTTCTTGAAGACCATCAACTGCTCATGCCCTC...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR TCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACACCCATTAGGCCAGTATaGCCCTTGTGGCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTPIRPV*PLWPGV
Trigger: AACCCCAGGCCACAAGGGTCATACTGGCCTAATGGG...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTGGTCCGGGTCTGCCTTaGGAGGACTTCATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTGPGLP*EDFMCA
Trigger: AGCACACATGAAGTCCTCTCAAGGCAGACCCGGACC...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCAGCCGACGCCTCAGCTTaGCACGGATCTTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQAADASA*HGSCQW
Trigger: CCATTGACAAGATCCGTGGCAAGCTGAGGCGTCGGC...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGACATTCTGGGCCTGGATaGTTAGAGCCATCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRHSGPG*LEPSCA
Trigger: GGCACAAGATGGCTCTAAGCATCCAGGCCCAGAATG...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTTCTCCCTTCTCTCCCTaGAGTCCTGCCACACCAGGA +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTSPFSP*SPATPG
Trigger: TCCTGGTGTGGCAGGACTGCAGGGAGAGAAGGGAGA...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACATCTCCCTTCTCTCCCTaGAGTCCTGCCACACCAGGA +
Preference number: 4 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTSPFSP*SPATPG
Trigger: TCCTGGTGTGGCAGGACTGCAGGGAGAGAAGGGAGA...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACATTCAGGCCTTCCCTCTaGACCACAGAGCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTFRPSL*TTEPGT
Trigger: TGTGCCAGGCTCTGTGGTGCAGAGGGAAGGCCTGAA...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAAACCCCCACACGGGTGTaGCCAGGGCCCACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: FFPYAKTFECILKGHGDETPTRV*PGPTSK
Trigger: CTTTGAGGTGGGCCCTGGCCACACCCGTGTGGGGGT...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAATACTCCTGGGAAGCCTaGAGCACCCGGAAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PQPYQINFSAPVPTCLIEYSWEA*STRKAN
Trigger: GTTGGCCTTCCGGGTGCTCCAGGCTTCCCAGGAGTA...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAATGGACCAGCTGGCCCTaGGCTGCCTTCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FFPYAKTFECILKGHGDEWTSWP*AAFFPC
Trigger: GCAGGGGAAGAAGGCAGCCCAGGGCCAGCTGGTCCA...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATTCCCCGTGGACCAGCTaGCCCTGGGCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNSPWTS*PWAAFF
Trigger: GAAGAAGGCAGCCCAGGGCCAGCTGGTCCACGGGGA...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAATCCTGGGATGCCAGATaGACCTTGGGGACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PQPYQINFSAPVPTCLIESWDAR*TLGTRR
Trigger: CCTCCTGGTCCCCAAGGTCCATCTGGCATCCCAGGA...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACTCCCTTGAAGCCCGGTaGACCTCTGGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNSLEAR*TSGSLC
Trigger: GCAGAGGGAGCCAGAGGTCCACCGGGCTTCAAGGGA...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAACCTTTGTTTCCCTTCTaGCCTAGGGCTCCCGGACGG +
Preference number: 4 (lower is better)
Translates to: PQPYQINFSAPVPTCLIEPLFPF*PRAPGR
Trigger: CCGTCCGGGAGCCCTAGGCCAGAAGGGAAACAAAGG...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCAAGGGCCACTCTCTCCTaGTTGTCCTTGGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQARATLS*LSLGTH
Trigger: ATGGGTCCCCAAGGACAACCAGGAGAGAGTGGCCCT...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACACCAGGTTCCCCAGGTTaGCCTGGTATTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTPGSPG*PGIPGG
Trigger: TCCTCCTGGAATACCAGGCCAACCTGGGGAACCTGG...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACGCCGGGCAGCAAGGCTaGCAAAGTACGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNAGQQG*QSTHTG
Trigger: CCCAGTGTGCGTACTTTGCCAGCCTTGCTGCCCGGC...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATATCTCCTGGTCGTCCTaGGGGACCAGGTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNISWSS*GTRWTS
Trigger: GCTGGTCCACCTGGTCCCTCAGGACGACCAGGAGAT...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCACTCTGGAGACAGCAGTaGAGAAGGGCCTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQALWRQQ*RRAWFS
Trigger: GGAAAACCAGGCCCTTCTTCACTGCTGTCTCCAGAG...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATGGTCCACGAGGACCCTaGAACCCTGGAAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNGPRGP*NPGSPG
Trigger: CCCAGGACTTCCAGGGTTTCAGGGTCCTCGTGGACC...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCAGTCCTTTGTCACCTTTaGTCCCAGGGTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQAVLCHL*SQGLPS
Trigger: AGAGGGGAGACCCTGGGATCAAAGGTGACAAAGGAC...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAAAATGCGGATGCCGGCTaGATGGGCAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FFPYAKTFECILKGHGDENADAG*MGSCCS
Trigger: GCTGCAGCAGCTGCCCATGCAGCCGGCATCCGCATT...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCTGTCATAGAGACGTTTaGCAATCACAGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: QYELTSTPRARVPSCICSCHRDV*QSQSCP
Trigger: AGGGCAAGACTGTGATTGGCAAACGTCTCTATGACA...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACATCCAGGTGATCCACTaGTGCCCGGTGGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNIQVIH*CPVVPL
Trigger: CAAGGGGACCACCGGGCAGCAGTGGATCACCTGGAT...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACCCCAATTCTCCAGGATaGCCCTGTGGTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNPNSPG*PCGPRA
Trigger: AGCCCTGGGACCACAGGGCCATCCTGGAGAATTGGG...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAAGGGTCCTGCAGGTCCTaGAGCACCAGGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FFPYAKTFECILKGHGDEGSCRS*STRVSS
Trigger: GCTGGAAACCCTGGTGCTCCAGGACCTGCAGGACCC...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCAAGGCCCTCTTTCTCCTaGGTTTCCTGGTGCACCATC +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQARPSFS*VSWCTI
Trigger: GATGGTGCACCAGGAAACCCAGGAGAAAGAGGGCCT...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACTCCCCTCAGACCAGGTaGGCCAGGATCACCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNSPQTR*ARITCV
Trigger: CACACAGGTGATCCTGGCCCACCTGGTCTGAGGGGA...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACCCTTTGTTTCCCTTCTaGCCTAGGGCTCCCGGACGG +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNPLFPF*PRAPGR
Trigger: CCGTCCGGGAGCCCTAGGCCAGAAGGGAAACAAAGG...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACATTCCCCAGGTTGGCCTaGTATTCCAGGAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTFPRLA*YSRRTH
Trigger: ATGGGTCCTCCTGGAATACCAGGCCAACCTGGGGAA...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCAGGAACCGGAAAGTTGTaGCAAAGGCATACTCATCAG +
Preference number: 4 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPGTGKL*QRHTHQ
Trigger: CTGATGAGTATGCCTTTGTCACAACTTTCCGGTTCC...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR TCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTTTCCTCGGTCACCCTTaGTTCCTAAGGGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTFLGHP*FLRDQV
Trigger: TACCTGGTCCCTTAGGAATCAAGGGTGACCGAGGAA...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACGGTCCACGAGGACCCTaGAACCCTGGAAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNGPRGP*NPGSPG
Trigger: CCCAGGACTTCCAGGGTTTCAGGGTCCTCGTGGACC...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAACAAGCTCTTCCTGAATaGGGCGCCGTAAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PQPYQINFSAPVPTCLIEQALPE*GAVRCP
Trigger: TGGACACCTTACGGCGCCTCATTCAGGAAGAGCTTG...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACATCTCCTTTAGGCCCTTaGTCTCCTGGCATTCTTGGG +
Preference number: 4 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTSPLGP*SPGILG
Trigger: CCCAAGAATGCCAGGAGAGCAAGGGCCTAAAGGAGA...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTCTGGCTTTCCATCTCTaGCCTGCTTGCCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTLAFHL*PACLLL
Trigger: GAGAAGAAGGCAAGCAGGGCAGAGATGGAAAGCCAG...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATATCCAGGTGATCCACTaGTGCCCGGTGGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNIQVIH*CPVVPL
Trigger: CAAGGGGACCACCGGGCAGCAGTGGATCACCTGGAT...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGATTCTACCCGGACACTTaGGCAGAGCACATTTTCACA +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRFYPDT*AEHIFT
Trigger: TGTGAAAATGTGCTCTGCCCAAGTGTCCGGGTAGAA...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp ACTGACACAGGTCCCAATGTACATGGTAGTGAACCACCCACAAGTAAGTCAAGCTGTGGGATGCCATACTaGTCAATGACTTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: TDTGPNVHGSEPPTSKSSCGMPY*SMTCQM
Trigger: CATCTGGCAAGTCATTGACCAGTATGGCATCCCACA...GCTTGACTTACTTGTGGGTGGTTCACTACCATGTACATTGGGACCTGTGTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTATCACAGTCTTGCCCTaGATGTCGATATTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCITVLP*MSIFSL
Trigger: GAGGGAGAATATCGACATCCAGGGCAAGACTGTGAT...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATCTCCTGGTTCTCCCTTaGAGCCAGGAAGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNLLVLP*SQEGLV
Trigger: CACCAGGCCTTCCTGGCTCCAAGGGAGAACCAGGAG...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATGCCAGGGGGACCTGCTaGACCAACCTCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNARGTC*TNLTLF
Trigger: GAAAAGGGTGAGGTTGGTCCAGCAGGTCCCCCTGGC...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGATCTCCCTTGTTTTCCTaGAAGACCCTTGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRSPLFS*KTLVPF
Trigger: AAAGGGGACAAGGGTCTTCCAGGAAAACAAGGGAGA...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAAAGCCCGGTGGACCTCTaGCTCCCTCTGCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: FFPYAKTFECILKGHGDESPVDL*LPLLLI
Trigger: TATCAGGAGCAGAGGGAGCCAGAGGTCCACCGGGCT...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACAGGGCCACTCTCTCCTaGTTGTCCTTGGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNRATLS*LSLGTH
Trigger: ATGGGTCCCCAAGGACAACCAGGAGAGAGTGGCCCT...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAATTCCCCAGGTTGGCCTaGTATTCCAGGAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: PQPYQINFSAPVPTCLIEFPRLA*YSRRTH
Trigger: ATGGGTCCTCCTGGAATACCAGGCCAACCTGGGGAA...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATGCCCTTCACATTACTTaGCCGGGCAGCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNALHIT*PGSKAG
Trigger: GCCAGCCTTGCTGCCCGGCCAAGTAATGTGAAGGGC...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTAGATTTCCTTCACACTaGACAAATCCATCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPRFPSH*TNPSSQ
Trigger: TTGACTTGATGGATTTGTTCAGTGTGAAGGAAATCT...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATCAGAGGGTCCTGCTATaGCAGGTTCTCCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNQRVLL*QVLPSD
Trigger: GTCTGAGGGGAGAACCTGGCATAGCAGGACCCTCTG...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTGACACATTCTGGGCCTaGATGCTTAGAGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTDTFWA*MLRAIL
Trigger: CAAGATGGCTCTAAGCATCCAGGCCCAGAATGTGTC...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAATTCTCCTCGAAGACCTaGAGCTCCAACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FFPYAKTFECILKGHGDEFSSKT*SSNWPS
Trigger: GCTGGGCCAGTTGGAGCTCCAGGTCTTCGAGGAGAA...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATTTCTCCAGGGGGACCTaGCTTTCCATCTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNFSRGT*LSISAL
Trigger: CAGGGCAGAGATGGAAAGCCAGGTCCCCCTGGAGAA...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACAGCCCGGTGGACCTCTaGCTCCCTCTGCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNSPVDL*LPLLLI
Trigger: TATCAGGAGCAGAGGGAGCCAGAGGTCCACCGGGCT...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCAAAACCCTGGAAGTCCTaGGCTGCCACTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQAKPWKS*AATFSF
Trigger: AAAGGAGAAAGTGGCAGCCCAGGACTTCCAGGGTTT...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATAGGACCCTGAAACCCTaGAAGTCCTGGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNRTLKP*KSWAAT
Trigger: AGTGGCAGCCCAGGACTTCCAGGGTTTCAGGGTCCT...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACGACCCTTGTCCCCTTTaGAACCTGGCAGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNDPCPL*NLADLG
Trigger: TCCCAGGTCTGCCAGGTTTCAAAGGGGACAAGGGTC...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACACCATCTTTTCCTGGTaGTCCATCCCTTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNTIFSW*SIPSRG
Trigger: CCCTCTGGAAGGGATGGATCACCAGGAAAAGATGGT...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACAACAGGATGGCCACCTaGTTGAAGGCACGATTCCCA +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNNRMAT*LKARFP
Trigger: TGGGAATCGTGCCTTCAAGCAGGTGGCCATCCTGTT...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCAGCAAGTCTCCAGTTCTaGATGTCTCGAGTCACAGTA +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQAASLQF*MSRVTV
Trigger: TACTGTGACTCGAGACATGCAGAACTGGAGACTTGC...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACTTCAGGCCTTCCCTCTaGACCACAGAGCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNFRPSL*TTEPGT
Trigger: TGTGCCAGGCTCTGTGGTGCAGAGGGAAGGCCTGAA...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACAGCTCCTACCTCTCCTaGTTCTCCTGGAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNSSYLS*FSWRST
Trigger: CGTGGACCTCCAGGAGAAGCAGGAGAGGTAGGAGCT...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACGGACAGCATCCTTCATaGCACCCACAGCGTTGTACT +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNGQHPS*HPQRCT
Trigger: AGTACAACGCTGTGGGTGCCATGAAGGATGCTGTCC...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACTTCTCCTCGAAGACCTaGAGCTCCAACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNFSSKT*SSNWPS
Trigger: GCTGGGCCAGTTGGAGCTCCAGGTCTTCGAGGAGAA...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACTTCACCCCGAGGTCCTaGCATTCCAGGTACGCCACT +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNFTPRS*HSRYAT
Trigger: AGTGGCGTACCTGGAATGCCAGGACCTCGGGGTGAA...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATTTCTCCTGGGACTCCTaGGATGCCAGATGGACCTTG +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNFSWDS*DARWTL
Trigger: CAAGGTCCATCTGGCATCCCAGGAGTCCCAGGAGAA...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACTTCTCCAGGGGGACCTaGCTTTCCATCTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNFSRGT*LSISAL
Trigger: CAGGGCAGAGATGGAAAGCCAGGTCCCCCTGGAGAA...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAAACCCTTCCCACCTGGTaGTCCTTTGTCACCTTTGAT +
Preference number: 4 (lower is better)
Translates to: PQPYQINFSAPVPTCLIETLPTW*SFVTFD
Trigger: ATCAAAGGTGACAAAGGACCACCAGGTGGGAAGGGT...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR TCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACCTCTGGAGACAGCAGTaGAGAAGGGCCTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNLWRQQ*RRAWFS
Trigger: GGAAAACCAGGCCCTTCTTCACTGCTGTCTCCAGAG...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAAAGCGTTGTACTCAACTaGCTTGTTCTCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: PQPYQINFSAPVPTCLIESVVLN*LVLTIQ
Trigger: CTGGATGGTGAGAACAAGGCAGTTGAGTACAACGCT...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACATGCCAATCACAGTCTTaGCCTGGATGTCGATATTCT +
Preference number: 4 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTCQSQS*PGCRYS
Trigger: AGAATATCGACATCCAGGGCAAGACTGTGATTGGCA...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACTGGCTTTCCATCTCTaGCCTGCTTGCCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FFPYAKTFECILKGHGDELAFHL*PACLLL
Trigger: GAGAAGAAGGCAAGCAGGGCAGAGATGGAAAGCCAG...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACTGCTCCAGGGGTTCCTaGGGGACCCATTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNCSRGS*GTHFSF
Trigger: AAAGGAGAAATGGGTCCCCCAGGAACCCCTGGAGCA...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CCA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACAGGACCAGGGCTTCCTaGAAGTCCATCTTTAGCGTA +
Preference number: 4 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNRTRAS*KSIFSV
Trigger: TACGCTAAAGATGGACTTCCAGGAAGCCCTGGTCCT...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTAAGACCAGATCATACTaGACACTTTTGCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTKTRSY*TLLQPA
Trigger: TGCAGGTTGCAAAAGTGTGCAGTATGATCTGGTCTT...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR GCA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAAACATCTTCAGTTCTCTaGACCACAGGGAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: FFPYAKTFECILKGHGDETSSVL*TTGKEP
Trigger: GGGTTCCTTCCCTGTGGTGCAGAGAACTGAAGATGT...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCATCATCAGGAAGACCTTaGGGAAACACATCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQASSGRP*GNTSSV
Trigger: AACTGAAGATGTGTTTCCCCAAGGTCTTCCTGATGA...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CCA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATAGGACCAGGGCTTCCTaGAAGTCCATCTTTAGCGTA +
Preference number: 4 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNRTRAS*KSIFSV
Trigger: TACGCTAAAGATGGACTTCCAGGAAGCCCTGGTCCT...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR GCA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACCAGGAGGGCAGTCGTTaGACACATCCTTTACTAAGA +
Preference number: 4 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNQEGSR*THPLLR
Trigger: TCTTAGTAAAGGATGTGTGCAACGACTGCCCTCCTG...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CAA 72 bp AAAGAAAACATAATACATGGGAATGGACAAAGATGCTaGCCCCTCTATGTCATCAGGGAACTGCTAAACAAA +
Preference number: 4 (lower is better)
Translates to: KENIIHGNGQRC*PLYVIRELLNK
Trigger: TTTGTTTAGCAGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATGTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
3UTR CAA 72 bp ACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTaGCCTAATAGAAGGAATAGATCTTGGATCTTAATT +
Preference number: 4 (lower is better)
Translates to: TLPNQLFCTSTN*PNRRNRSWILI
Trigger: AATTAAGATCCAAGATCTATTCCTTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 90 bp AGGCCCTTGAGGTCCTGGTGGCCCCGCCACACCTGCATTCCCATCTaGTCCTGGTGGCCCAGGATTCCCCGGTGGGCCCATGAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: RPLRSWWPRHTCIPI*SWWPRIPRWAHEAW
Trigger: CCAGGCTTCATGGGCCCACCGGGGAATCCTGGGCCACCAGGAGCAGATGGGAATGCAGGTGTGGCGGGGCCACCAGGACCTCAAGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 90 bp TGGGAGACCAGGAGCACCAGGATCTCCCCGTGGACCAGCTGGCCCTaGGCTGCCTTCTTCCCCTGCTGTTCCCTTCTCTCCACGCTCCCC +
Preference number: 5 (lower is better)
Translates to: WETRSTRISPWTSWP*AAFFPCCSLLSTLP
Trigger: GGGGAGCGTGGAGAGAAGGGAACAGCAGGGGAAGAAGGCAGCCCAGGGCCAGCTGGTCCACGGGGAGATCCTGGTGCTCCTGGTCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159993.8
ENSMUST00000160513.2
ENSMUST00000229585.2
CDS CCA 90 bp TCACCTTTGGGGCCCATTGGTCCAGAGGGTCCTTCCAGACCACCTTaGCCAGGACGGCCTGGCTCACCCATGGGGCCTGTCCGACCTGGC +
Preference number: 5 (lower is better)
Translates to: SPLGPIGPEGPSRPP*PGRPGSPMGPVRPG
Trigger: GCCAGGTCGGACAGGCCCCATGGGTGAGCCAGGCCGTCCTGGCCAAGGTGGTCTGGAAGGACCCTCTGGACCAATGGGCCCCAAAGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 90 bp GCACCCGGAGGTCCAATGGGTCCCCGAGGACCCAATTCTCCAGGATaGCCCTGTGGTCCCAGGGCTCCAGGCTCGCCAGGATCACCTTTC +
Preference number: 5 (lower is better)
Translates to: APGGPMGPRGPNSPG*PCGPRAPGSPGSPF
Trigger: GAAAGGTGATCCTGGCGAGCCTGGAGCCCTGGGACCACAGGGCCATCCTGGAGAATTGGGTCCTCGGGGACCCATTGGACCTCCGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS TCA 90 bp GATTCCCAGGTCTGCCGCCGGCCTGGGCGGAGAAGCTGCGGCTGGTaGTATAACGCAGGGCGTCACCCGTGTTCGTGTTACCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: DSQVCRRPGRRSCGW*YNAGRHPCSCYRHG
Trigger: ACCATGGCGGTAACACGAACACGGGTGACGCCCTGCGTTATATCACCAGCCGCAGCTTCTCCGCCCAGGCCGGCGGCAGACCTGGGAATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CCA 90 bp GGTCTTCAAGAACCCGATCTGTTCGCTCCCAGGGGTGGGCAGCTGTaGAGGCGCAGGTGGCGGCTCTGTCACCACAGTCACCTGACACGG +
Preference number: 5 (lower is better)
Translates to: GLQEPDLFAPRGGQL*RRRWRLCHHSHLTR
Trigger: CCGTGTCAGGTGACTGTGGTGACAGAGCCGCCACCTGCGCCTCCACAGCTGCCCACCCCTGGGAGCGAACAGATCGGGTTCTTGAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CCA 90 bp CATTGGTCCAGAGGGTCCTTCCAGACCACCTTGGCCAGGACGGCCTaGCTCACCCATGGGGCCTGTCCGACCTGGCAGCCCATCTTTTCC +
Preference number: 5 (lower is better)
Translates to: HWSRGSFQTTLARTA*LTHGACPTWQPIFS
Trigger: GGAAAAGATGGGCTGCCAGGTCGGACAGGCCCCATGGGTGAGCCAGGCCGTCCTGGCCAAGGTGGTCTGGAAGGACCCTCTGGACCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS TCA 90 bp GTTCTCCCCTCAGACCAGGTGGGCCAGGATCACCTGTGTGTCCCTTaGAGCCCGGTGGACCTCTGGCTCCCTCTGCTCCTGATAGGCCTG +
Preference number: 5 (lower is better)
Translates to: VLPSDQVGQDHLCVP*SPVDLWLPLLLIGL
Trigger: CAGGCCTATCAGGAGCAGAGGGAGCCAGAGGTCCACCGGGCTTCAAGGGACACACAGGTGATCCTGGCCCACCTGGTCTGAGGGGAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 90 bp TATCTCCTGGTCGTCCTGAGGGACCAGGTGGACCAGCAACCCCAATaGCTGGGTCACCACGGCTGCCAGGAGAGCCAGGAATCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: YLLVVLRDQVDQQPQ*LGHHGCQESQESQV
Trigger: CACCTGGGATTCCTGGCTCTCCTGGCAGCCGTGGTGACCCAGGCATTGGGGTTGCTGGTCCACCTGGTCCCTCAGGACGACCAGGAGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159993.8
ENSMUST00000160513.2
ENSMUST00000229585.2
CDS TCA 90 bp GGCAGCTGTGGAGGCGCAGGTGGCGGCTCTGTCACCACAGTCACCTaGCACGGACCCAACGGGATGTCACAGCAAGTCTCCAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: GSCGGAGGGSVTTVT*HGPNGMSQQVSSSA
Trigger: TGCAGAACTGGAGACTTGCTGTGACATCCCGTTGGGTCCGTGTCAGGTGACTGTGGTGACAGAGCCGCCACCTGCGCCTCCACAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CCA 90 bp TCTGCCCTGCTTGCCTTCTTCTCCTGGGACTCCTGGGATGCCAGATaGACCTTGGGGACCAGGAGGGCCTTCTTTGCCCTGAGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: SALLAFFSWDSWDAR*TLGTRRAFFALRPL
Trigger: CAAGGGCCTCAGGGCAAAGAAGGCCCTCCTGGTCCCCAAGGTCCATCTGGCATCCCAGGAGTCCCAGGAGAAGAAGGCAAGCAGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 90 bp CCTTCCAGAGGGTCCTGCTATGCCAGGTTCTCCCCTCAGACCAGGTaGGCCAGGATCACCTGTGTGTCCCTTGAAGCCCGGTGGACCTCT +
Preference number: 5 (lower is better)
Translates to: PSRGSCYARFSPQTR*ARITCVSLEARWTS
Trigger: AGAGGTCCACCGGGCTTCAAGGGACACACAGGTGATCCTGGCCCACCTGGTCTGAGGGGAGAACCTGGCATAGCAGGACCCTCTGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 90 bp GTGGCCTGGGGTTCCAGGGTCTCCAGGCTGACCCTTCCCACCTGGTaGTCCTTTGTCACCTTTGATCCCAGGGTCTCCCCTCTCGCCTTT +
Preference number: 5 (lower is better)
Translates to: VAWGSRVSRLTLPTW*SFVTFDPRVSPLAF
Trigger: AAAGGCGAGAGGGGAGACCCTGGGATCAAAGGTGACAAAGGACCACCAGGTGGGAAGGGTCAGCCTGGAGACCCTGGAACCCCAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 90 bp GTCTTGCCCGGTTCTCCAGGGGGACCTGGCTTTCCATCTCTGCCCTaGTTGCCTTCTTCTCCTGGGACTCCTGGGATGCCAGATGGACCT +
Preference number: 5 (lower is better)
Translates to: VLPGSPGGPGFPSLP*LPSSPGTPGMPDGP
Trigger: AGGTCCATCTGGCATCCCAGGAGTCCCAGGAGAAGAAGGCAAGCAGGGCAGAGATGGAAAGCCAGGTCCCCCTGGAGAACCGGGCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTCCCGGCTCCCCATCCTaGCCCTTTCCTGGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPPGSPS*PFPGGP
Trigger: AGGGCCACCAGGAAAGGGCAAGGATGGGGAGCCGGG...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 90 bp GAGATCCAGGTGATCCACTGCTGCCCGGTGGTCCCCTTGTTCCTCTaGGACCCTGTGGTCCAGCAGGTCCAGTGTCACCATCTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: EIQVIHCCPVVPLFL*DPVVQQVQCHHLFL
Trigger: CAGGAAAAGATGGTGACACTGGACCTGCTGGACCACAGGGTCCCAGAGGAACAAGGGGACCACCGGGCAGCAGTGGATCACCTGGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 90 bp GCATTCCAGGTACGCCACTTTCGCCAGAGTCTCCTGGTTCTCCCTTaGAGCCAGGAAGGCCTGGTGGTCCATTCAGCCCATCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: AFQVRHFRQSLLVLP*SQEGLVVHSAHPFQ
Trigger: CTGGAAAGGATGGGCTGAATGGACCACCAGGCCTTCCTGGCTCCAAGGGAGAACCAGGAGACTCTGGCGAAAGTGGCGTACCTGGAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 90 bp ACCCACACCAACAGCAAAAATGCGGATGCCGGCTGCATGGGCAGCTaGTGCAGCATCCAGCACCAGGTCTTGGCTACGACCATCAGTCAA +
Preference number: 5 (lower is better)
Translates to: THTNSKNADAGCMGS*CSIQHQVLATTISQ
Trigger: TTGACTGATGGTCGTAGCCAAGACCTGGTGCTGGATGCTGCAGCAGCTGCCCATGCAGCCGGCATCCGCATTTTTGCTGTTGGTGTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS GCA 90 bp CATCCAGTTCCTCCTTCAATGCTGCACCCACACCAACAGCAAAAATaGGGATGCCGGCTGCATGGGCAGCTGCTGCAGCATCCAGCACCA +
Preference number: 5 (lower is better)
Translates to: HPVPPSMLHPHQQQK*GCRLHGQLLQHPAP
Trigger: TGGTGCTGGATGCTGCAGCAGCTGCCCATGCAGCCGGCATCCGCATTTTTGCTGTTGGTGTGGGTGCAGCATTGAAGGAGGAACTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS GCA 90 bp CACCATCTTTTCCTGGTGATCCATCCCTTCCAGAGGGTCCTGCTATaGCAGGTTCTCCCCTCAGACCAGGTGGGCCAGGATCACCTGTGT +
Preference number: 5 (lower is better)
Translates to: HHLFLVIHPFQRVLL*QVLPSDQVGQDHLC
Trigger: ACACAGGTGATCCTGGCCCACCTGGTCTGAGGGGAGAACCTGGCATAGCAGGACCCTCTGGAAGGGATGGATCACCAGGAAAAGATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 90 bp GTATTCCAGGAGGACCCATCTCTCCTCGGAGACCAACTCCAGGTGTaGCAGGGTCACCTTTGGCTCCTCTTTCACCTTTGGGGCCCATTG +
Preference number: 5 (lower is better)
Translates to: VFQEDPSLLGDQLQV*QGHLWLLFHLWGPL
Trigger: CAATGGGCCCCAAAGGTGAAAGAGGAGCCAAAGGTGACCCTGGCACACCTGGAGTTGGTCTCCGAGGAGAGATGGGTCCTCCTGGAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 90 bp CATCAACTCGGGGGCCTCGGAAGACCACCCGGACAGCATCCTTCATaGCACCCACAGCGTTGTACTCAACTGCCTTGTTCTCACCATCCA +
Preference number: 5 (lower is better)
Translates to: HQLGGLGRPPGQHPS*HPQRCTQLPCSHHP
Trigger: TGGATGGTGAGAACAAGGCAGTTGAGTACAACGCTGTGGGTGCCATGAAGGATGCTGTCCGGGTGGTCTTCCGAGGCCCCCGAGTTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CCA 90 bp GGGCTTCCTGGAAGTCCATCTTTAGCGTATCCAGGTTCCCCAGGTTaGCCTGGTATTCCAGGAGGACCCATCTCTCCTCGGAGACCAACT +
Preference number: 5 (lower is better)
Translates to: GLPGSPSLAYPGSPG*PGIPGGPISPRRPT
Trigger: AGTTGGTCTCCGAGGAGAGATGGGTCCTCCTGGAATACCAGGCCAACCTGGGGAACCTGGATACGCTAAAGATGGACTTCCAGGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTTCACCTGTGTGTCCCTaGAAGCCCGGTGGACCTCTG +
Preference number: 5 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPSPVCP*KPGGPL
Trigger: CAGAGGTCCACCGGGCTTCAAGGGACACACAGGTGA...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp AACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCCAGGTTCCCCAGGTaGGCCTGGTATTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: NPVSSIPPWLLLQLLPPGSRFPR*AWYSRR
Trigger: CCTCCTGGAATACCAGGCCAACCTGGGGAACCTGGA...ACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp GGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTACACCTCCTCGCGAGAGTaGAAGTGGCCCAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: GSRENLSCTDGCCLPQPYTSSRE*KWPSSK
Trigger: CTTTGAACTGGGCCACTTCAACTCTCGCGAGGAGGT...GTAGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTCCACCTGGTGGTCCTTaGTCACCTTTGATCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPPPGGP*SPLIPG
Trigger: CCCTGGGATCAAAGGTGACAAAGGACCACCAGGTGG...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGAGCACCATCATGCCCCTaGGCACCCGGAGGTCCAATG +
Preference number: 5 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRAPSCP*APGGPM
Trigger: CATTGGACCTCCGGGTGCCAAGGGGCATGATGGTGC...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCACCCGGCTCCCCATCCTaGCCCTTTCCTGGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQAPGSPS*PFPGGP
Trigger: AGGGCCACCAGGAAAGGGCAAGGATGGGGAGCCGGG...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp CTTTTCCCTGGGCCATCTTTAGGCACAGCTGAGGAAACAACAATACAGTCTCCAGGCCCTTCACATTACTaGGCCGGGCAGCAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LFPGPSLGTAEETTIQSPGPSHY*AGQQGW
Trigger: CCAGCCTTGCTGCCCGGCCAAGTAATGTGAAGGGCC...TGGAGACTGTATTGTTGTTTCCTCAGCTGTGCCTAAAGATGGCCCAGGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp GAGGCTCCAGAGAAAACCTCTCCTGCACAGATGGATGCTGCCTACCTCAACCCTAGCTTGCCACGGATCTaGTCAATGGCATTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: EAPEKTSPAQMDAAYLNPSLPRI*SMALKS
Trigger: CGACTTCAATGCCATTGACAAGATCCGTGGCAAGCT...AGGGTTGAGGTAGGCAGCATCCATCTGTGCAGGAGAGGTTTTCTCTGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp CCTCCATGGCTTCTACTTCAGCTCCTGCCTCCAGGTTCTTGCTTTGAGTTCCCTTTGTACTCAACTGCCTaGTTCTCACCATCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: PPWLLLQLLPPGSCFEFPLYSTA*FSPSSR
Trigger: CCGGCTGGATGGTGAGAACAAGGCAGTTGAGTACAA...AGGGAACTCAAAGCAAGAACCTGGAGGCAGGAGCTGAAGTAGAAGCCATGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAAGGCCTTGGTGACCTCTaGGTCCGGGGGCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: PQPYQINFSAPVPTCLIEGLGDL*VRGLPA
Trigger: AGCAGGGAGCCCCCGGACCAAGAGGTCACCAAGGCC...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGATGCACCACGTTCTCCTaGGCTTCCCTGTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRCTTFS*ASLWSS
Trigger: GCTGGACCACAGGGAAGCCAAGGAGAACGTGGTGCA...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp ACTGACACAGGTCCCAATGTACATGGTAGTGAACCACCCACAAGTAAGTCAAGCTGCACCACGTTCTCCTaGGCTTCCCTGTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TDTGPNVHGSEPPTSKSSCTTFS*ASLWSS
Trigger: GCTGGACCACAGGGAAGCCAAGGAGAACGTGGTGCA...GCTTGACTTACTTGTGGGTGGTTCACTACCATGTACATTGGGACCTGTGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 90 bp CACCTGACACGGACCCAACGGGATGTCACAGCAAGTCTCCAGTTCTaGATGTCTCGAGTCACAGTAAATCACAATCCGCTGCAGGTCAAA +
Preference number: 5 (lower is better)
Translates to: HLTRTQRDVTASLQF*MSRVTVNHNPLQVK
Trigger: TTTGACCTGCAGCGGATTGTGATTTACTGTGACTCGAGACATGCAGAACTGGAGACTTGCTGTGACATCCCGTTGGGTCCGTGTCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTAAGGTGTCTACCAGGTaGGCTACCCACTGGCGGACT +
Preference number: 5 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCKVSTR*ATHWRT
Trigger: AGTCCGCCAGTGGGTAGCCAACCTGGTAGACACCTT...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGACCACCTGGTGGTCCTTaGTCACCTTTGATCCCAGGG +
Preference number: 5 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRPPGGP*SPLIPG
Trigger: CCCTGGGATCAAAGGTGACAAAGGACCACCAGGTGG...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGTCCAGGTTCCCCAGGTaGGCCTGGTATTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQSRFPR*AWYSRR
Trigger: CCTCCTGGAATACCAGGCCAACCTGGGGAACCTGGA...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 90 bp TCCAGCCGGATAGAGACCTGTGGGATGCCATACTGGTCAATGACTTaGCAGATGTACCAATCTTCTTTCCGTGATGTTTTCCGGAACCGG +
Preference number: 5 (lower is better)
Translates to: SSRIETCGMPYWSMT*QMYQSSFRDVFRNR
Trigger: CCGGTTCCGGAAAACATCACGGAAAGAAGATTGGTACATCTGGCAAGTCATTGACCAGTATGGCATCCCACAGGTCTCTATCCGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp ACTGACACAGGTCCCAATGTACATGGTAGTGAACCACCCACAAGTAAGTCAAGCCTCTCCTTTAGGCCCTaGCTCTCCTGGCATTCTTGG +
Preference number: 5 (lower is better)
Translates to: TDTGPNVHGSEPPTSKSSLSFRP*LSWHSW
Trigger: CCAAGAATGCCAGGAGAGCAAGGGCCTAAAGGAGAG...GCTTGACTTACTTGTGGGTGGTTCACTACCATGTACATTGGGACCTGTGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAAGCACCATCATGCCCCTaGGCACCCGGAGGTCCAATG +
Preference number: 5 (lower is better)
Translates to: PQPYQINFSAPVPTCLIEAPSCP*APGGPM
Trigger: CATTGGACCTCCGGGTGCCAAGGGGCATGATGGTGC...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 90 bp GAACCAGCAAACAGTCAATGTAGAGGGACACATTCTGGGCCTGGATaGTTAGAGCCATCTTGTGCCAGTCACGGTCAAAGAGGTCATCAA +
Preference number: 5 (lower is better)
Translates to: EPANSQCRGTHSGPG*LEPSCASHGQRGHQ
Trigger: TTGATGACCTCTTTGACCGTGACTGGCACAAGATGGCTCTAAGCATCCAGGCCCAGAATGTGTCCCTCTACATTGACTGTTTGCTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS GCA 90 bp TCCGCTGCAGGTCAAAATCAATGGGAACGCTGTCATAGAGACGTTTaGCAATCACAGTCTTGCCCTGGATGTCGATATTCTCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: SAAGQNQWERCHRDV*QSQSCPGCRYSPSP
Trigger: AGGAGAGGGAGAATATCGACATCCAGGGCAAGACTGTGATTGGCAAACGTCTCTATGACAGCGTTCCCATTGATTTTGACCTGCAGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTTCATACTGCACACTTTaGCAACCTGCACGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCSYCTL*QPARWA
Trigger: GGCCCAACGTGCAGGTTGCAAAAGTGTGCAGTATGA...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp CAATATGAACTAACCAGTACCCCCAGAGCTCGTGTCCCCAGCTGCATATGTAGCCTCATCAGGAAGACCTaGGGGAAACACATCTTCAGT +
Preference number: 5 (lower is better)
Translates to: QYELTSTPRARVPSCICSLIRKT*GKHIFS
Trigger: ACTGAAGATGTGTTTCCCCAAGGTCTTCCTGATGAG...GCTACATATGCAGCTGGGGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp GTCCACAGGAATCCTCCTAAGGAAGTCAGCTTTCCAATTTGCAACAGACCCTGTATGGCACCCACAGCGTaGTACTCAACTGCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VHRNPPKEVSFPICNRPCMAPTA*YSTALF
Trigger: GAACAAGGCAGTTGAGTACAACGCTGTGGGTGCCAT...ACAGGGTCTGTTGCAAATTGGAAAGCTGACTTCCTTAGGAGGATTCCTGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACTCTCCCCTCTCGCCTTaGGATCCTGGCTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNSPLSP*DPGSPG
Trigger: GCCTGGAGAGCCAGGATCCAAAGGCGAGAGGGGAGA...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACGGCCCTTCACATTACTaGGCCGGGCAGCAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNGPSHY*AGQQGW
Trigger: CCAGCCTTGCTGCCCGGCCAAGTAATGTGAAGGGCC...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp CAAGACATAGAGAGAAACCCTGTAAGCAGCATTCCTCCATGGCTTCTACTTCAGCTGCCACTTTCTCCTTaGTTTCCCTTCTGGCCTAGG +
Preference number: 5 (lower is better)
Translates to: QDIERNPVSSIPPWLLLQLPLSP*FPFWPR
Trigger: CCTAGGCCAGAAGGGAAACAAAGGAGAAAGTGGCAG...CTGAAGTAGAAGCCATGGAGGAATGCTGCTTACAGGGTTTCTCTCTATGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAATCTCCCCTCTCGCCTTaGGATCCTGGCTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: FFPYAKTFECILKGHGDESPLSP*DPGSPG
Trigger: GCCTGGAGAGCCAGGATCCAAAGGCGAGAGGGGAGA...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp CCTCAACCCTACCAAATCAACTTTTCTGCACCAGTACCAACTTGCCTAATAGAACTCTCCTTTAGGCCCTaGCTCTCCTGGCATTCTTGG +
Preference number: 5 (lower is better)
Translates to: PQPYQINFSAPVPTCLIELSFRP*LSWHSW
Trigger: CCAAGAATGCCAGGAGAGCAAGGGCCTAAAGGAGAG...TTCTATTAGGCAAGTTGGTACTGGTGCAGAAAAGTTGATTTGGTAGGGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp GAACCTATACTGGTGGGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACACCAGGAGGGCAGTCGTaGCACACATCCTTTACTAAG +
Preference number: 5 (lower is better)
Translates to: EPILVGKCHCTSDQTQSTPGGQS*HTSFTK
Trigger: CTTAGTAAAGGATGTGTGCAACGACTGCCCTCCTGG...TGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACCCACCAGTATAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp CATAATACATGGGAATGGACAAAGATGCTTGCCCCTCTATGTCATCAGGGAACTCCAGGAGGGCAGTCGTaGCACACATCCTTTACTAAG +
Preference number: 5 (lower is better)
Translates to: HNTWEWTKMLAPLCHQGTPGGQS*HTSFTK
Trigger: CTTAGTAAAGGATGTGTGCAACGACTGCCCTCCTGG...AGTTCCCTGATGACATAGAGGGGCAAGCATCTTTGTCCATTCCCATGTATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAATCACCTGTGTGTCCCTaGAAGCCCGGTGGACCTCTG +
Preference number: 5 (lower is better)
Translates to: FFPYAKTFECILKGHGDESPVCP*KPGGPL
Trigger: CAGAGGTCCACCGGGCTTCAAGGGACACACAGGTGA...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp TTCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAAAGGATGGCCACCTGCTaGAAGGCACGATTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: FFPYAKTFECILKGHGDERMATC*KARFPG
Trigger: ACCTGGGAATCGTGCCTTCAAGCAGGTGGCCATCCT...TTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATGGTCCTTTGTCACCTTaGATCCCAGGGTCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNGPLSP*IPGSPL
Trigger: GAGGGGAGACCCTGGGATCAAAGGTGACAAAGGACC...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS TCA 90 bp GCCATACTGGTCAATGACTTGCCAGATGTACCAATCTTCTTTCCGTaGTGTTTTCCGGAACCGGAAAGTTGTGACAAAGGCATACTCATC +
Preference number: 5 (lower is better)
Translates to: AILVNDLPDVPIFFP*CFPEPESCDKGILI
Trigger: GATGAGTATGCCTTTGTCACAACTTTCCGGTTCCGGAAAACATCACGGAAAGAAGATTGGTACATCTGGCAAGTCATTGACCAGTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACAGCCGACGCCTCAGCTaGCCACGGATCTTGTCAATG +
Preference number: 5 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNSRRLS*PRILSM
Trigger: CATTGACAAGATCCGTGGCAAGCTGAGGCGTCGGCT...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp GGTAAATGTCACTGTACTTCAGACCAAACCCAGAGTACAACAATGAACCAAAATGGAGGGCATGAGCAGTaGATGGTCTTCAAGAACCCG +
Preference number: 5 (lower is better)
Translates to: GKCHCTSDQTQSTTMNQNGGHEQ*MVFKNP
Trigger: CGGGTTCTTGAAGACCATCAACTGCTCATGCCCTCC...ATTTTGGTTCATTGTTGTACTCTGGGTTTGGTCTGAAGTACAGTGACATTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp TCTTTCCATATGCCAAAACATTTGAATGCATCCTCAAAGGGCATGGTGATGAACCTGCCACTTTCTCCTTaGTTTCCCTTCTGGCCTAGG +
Preference number: 5 (lower is better)
Translates to: SFHMPKHLNASSKGMVMNLPLSP*FPFWPR
Trigger: CCTAGGCCAGAAGGGAAACAAAGGAGAAAGTGGCAG...GTTCATCACCATGCCCTTTGAGGATGCATTCAAATGTTTTGGCATATGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS-3UTR CAA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACGGTCCTTTGTCACCTTaGATCCCAGGGTCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNGPLSP*IPGSPL
Trigger: GAGGGGAGACCCTGGGATCAAAGGTGACAAAGGACC...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS TCA 90 bp TGTACCAATCTTCTTTCCGTGATGTTTTCCGGAACCGGAAAGTTGTaGCAAAGGCATACTCATCAGGAAGACCTTGGGGAAACACATCTT +
Preference number: 5 (lower is better)
Translates to: CTNLLSVMFSGTGKL*QRHTHQEDLGETHL
Trigger: AAGATGTGTTTCCCCAAGGTCTTCCTGATGAGTATGCCTTTGTCACAACTTTCCGGTTCCGGAAAACATCACGGAAAGAAGATTGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp GACCCTGATATAGCTCTCTCTTGTGAGGCTATGCCAGTACCTGGCAAATACAGAAAACCTGTAATTTCCTaGGTTCCTCCATTGGTATGT +
Preference number: 5 (lower is better)
Translates to: DPDIALSCEAMPVPGKYRKPVIS*VPPLVC
Trigger: ACATACCAATGGAGGAACCAAGGAAATTACAGGTTT...TCTGTATTTGCCAGGTACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACCTTCTACCCGGACACTaGGGCAGAGCACATTTTCAC +
Preference number: 5 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNLLPGH*GRAHFH
Trigger: GTGAAAATGTGCTCTGCCCAAGTGTCCGGGTAGAAG...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp GGTTTTAATAACTGTGAGGTCTCTGAGGACGGGAAAAGACAATTAAGGCAGGCATCCTTGGTTCCTCCATaGGTATGTTTAAACCGATCT +
Preference number: 5 (lower is better)
Translates to: GFNNCEVSEDGKRQLRQASLVPP*VCLNRS
Trigger: AGATCGGTTTAAACATACCAATGGAGGAACCAAGGA...TGCCTGCCTTAATTGTCTTTTCCCGTCCTCAGAGACCTCACAGTTATTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS-3UTR CAA 90 bp AATGGAAAGGGAAATACATTTAGTAATCACCTGTTCATGGTGTGTGTACAGAACTTGCCAATCACAGTCTaGCCCTGGATGTCGATATTC +
Preference number: 5 (lower is better)
Translates to: NGKGNTFSNHLFMVCVQNLPITV*PWMSIF
Trigger: GAATATCGACATCCAGGGCAAGACTGTGATTGGCAA...GTTCTGTACACACACCATGAACAGGTGATTACTAAATGTATTTCCCTTTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CCA 72 bp TGGCCCCGCCACACCTGCATTCCCATCTGCTCCTGGTaGCCCAGGATTCCCCGGTGGGCCCATGAAGCCTGG +
Preference number: 6 (lower is better)
Translates to: WPRHTCIPICSW*PRIPRWAHEAW
Trigger: CCAGGCTTCATGGGCCCACCGGGGAATCCTGGGCCACCAGGAGCAGATGGGAATGCAGGTGTGGCGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp TGGTGGCCCCGCCACACCTGCATTCCCATCTGCTCCTaGTGGCCCAGGATTCCCCGGTGGGCCCATGAAGCC +
Preference number: 6 (lower is better)
Translates to: WWPRHTCIPICS*WPRIPRWAHEA
Trigger: GGCTTCATGGGCCCACCGGGGAATCCTGGGCCACCAGGAGCAGATGGGAATGCAGGTGTGGCGGGGCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp GGGCCCATTGGTCCAGAGGGTCCTTCCAGACCACCTTaGCCAGGACGGCCTGGCTCACCCATGGGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: GPIGPEGPSRPP*PGRPGSPMGPV
Trigger: GACAGGCCCCATGGGTGAGCCAGGCCGTCCTGGCCAAGGTGGTCTGGAAGGACCCTCTGGACCAATGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 72 bp CTGAGGCCCTTGAGGTCCTGGTGGCCCCGCCACACCTaGATTCCCATCTGCTCCTGGTGGCCCAGGATTCCC +
Preference number: 6 (lower is better)
Translates to: LRPLRSWWPRHT*IPICSWWPRIP
Trigger: GGGAATCCTGGGCCACCAGGAGCAGATGGGAATGCAGGTGTGGCGGGGCCACCAGGACCTCAAGGGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp GAACCCGATCTGTTCGCTCCCAGGGGTGGGCAGCTGTaGAGGCGCAGGTGGCGGCTCTGTCACCACAGTCAC +
Preference number: 6 (lower is better)
Translates to: EPDLFAPRGGQL*RRRWRLCHHSH
Trigger: GTGACTGTGGTGACAGAGCCGCCACCTGCGCCTCCACAGCTGCCCACCCCTGGGAGCGAACAGATCGGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CAA 72 bp GCTGCTCCAGGAGGTCCTTGTGCACCATCATGCCCCTaGGCACCCGGAGGTCCAATGGGTCCCCGAGGACCC +
Preference number: 6 (lower is better)
Translates to: AAPGGPCAPSCP*APGGPMGPRGP
Trigger: GGGTCCTCGGGGACCCATTGGACCTCCGGGTGCCAAGGGGCATGATGGTGCACAAGGACCTCCTGGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159993.8
ENSMUST00000160513.2
ENSMUST00000229585.2
CDS CAA 90 bp TTCACCTTTGGGGCCCATTGGTCCAGAGGGTCCTTCCAGACCACCTaGGCCAGGACGGCCTGGCTCACCCATGGGGCCTGTCCGACCTGG +
Preference number: 6 (lower is better)
Translates to: FTFGAHWSRGSFQTT*ARTAWLTHGACPTW
Trigger: CCAGGTCGGACAGGCCCCATGGGTGAGCCAGGCCGTCCTGGCCAAGGTGGTCTGGAAGGACCCTCTGGACCAATGGGCCCCAAAGGTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS TCA 72 bp GTCTGCCGCCGGCCTGGGCGGAGAAGCTGCGGCTGGTaGTATAACGCAGGGCGTCACCCGTGTTCGTGTTAC +
Preference number: 6 (lower is better)
Translates to: VCRRPGRRSCGW*YNAGRHPCSCY
Trigger: GTAACACGAACACGGGTGACGCCCTGCGTTATATCACCAGCCGCAGCTTCTCCGCCCAGGCCGGCGGCAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CCA 72 bp GGGTCCCCGAGGACCCAATTCTCCAGGATGGCCCTGTaGTCCCAGGGCTCCAGGCTCGCCAGGATCACCTTT +
Preference number: 6 (lower is better)
Translates to: GSPRTQFSRMAL*SQGSRLARITF
Trigger: AAAGGTGATCCTGGCGAGCCTGGAGCCCTGGGACCACAGGGCCATCCTGGAGAATTGGGTCCTCGGGGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp CTGCTCCAGGAGGTCCTTGTGCACCATCATGCCCCTTaGCACCCGGAGGTCCAATGGGTCCCCGAGGACCCA +
Preference number: 6 (lower is better)
Translates to: LLQEVLVHHHAP*HPEVQWVPEDP
Trigger: TGGGTCCTCGGGGACCCATTGGACCTCCGGGTGCCAAGGGGCATGATGGTGCACAAGGACCTCCTGGAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159993.8
ENSMUST00000160513.2
ENSMUST00000229585.2
CDS CAA 72 bp AACCCAGGTGGTCCACGTAGTCCCGGCTCCCCATCCTaGCCCTTTCCTGGTGGCCCTGGGAGACCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: NPGGPRSPGSPS*PFPGGPGRPGA
Trigger: TGCTCCTGGTCTCCCAGGGCCACCAGGAAAGGGCAAGGATGGGGAGCCGGGACTACGTGGACCACCTGGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159993.8
ENSMUST00000160513.2
ENSMUST00000229585.2
CDS TCA 72 bp GGCTACGACCATCAGTCAACAGGATGGCCACCTGCTTaGAGGCACGATTCCCAGGTCTGCCGCCGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: GYDHQSTGWPPA*RHDSQVCRRPG
Trigger: CCCAGGCCGGCGGCAGACCTGGGAATCGTGCCTTCAAGCAGGTGGCCATCCTGTTGACTGATGGTCGTAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS TCA 72 bp GGAGGCGCAGGTGGCGGCTCTGTCACCACAGTCACCTaGCACGGACCCAACGGGATGTCACAGCAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: GGAGGGSVTTVT*HGPNGMSQQVS
Trigger: GGAGACTTGCTGTGACATCCCGTTGGGTCCGTGTCAGGTGACTGTGGTGACAGAGCCGCCACCTGCGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS TCA 72 bp TCAGACCAGGTGGGCCAGGATCACCTGTGTGTCCCTTaGAGCCCGGTGGACCTCTGGCTCCCTCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SDQVGQDHLCVP*SPVDLWLPLLL
Trigger: CAGGAGCAGAGGGAGCCAGAGGTCCACCGGGCTTCAAGGGACACACAGGTGATCCTGGCCCACCTGGTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 72 bp GTGGACCAGCAACCCCAATGCCTGGGTCACCACGGCTaGCAGGAGAGCCAGGAATCCCAGGTGTTCCTCGGT +
Preference number: 6 (lower is better)
Translates to: VDQQPQCLGHHG*QESQESQVFLG
Trigger: ACCGAGGAACACCTGGGATTCCTGGCTCTCCTGGCAGCCGTGGTGACCCAGGCATTGGGGTTGCTGGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159993.8
ENSMUST00000160513.2
ENSMUST00000229585.2
CDS CAA 72 bp ATGCGCCGCGCAGCTGCCTTCACCTCCTCGCGAGAGTaGAAGTGGCCCAGTTCAAAGGCTGTAGTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: MRRAAAFTSSRE*KWPSSKAVVGR
Trigger: CCGGCCCACTACAGCCTTTGAACTGGGCCACTTCAACTCTCGCGAGGAGGTGAAGGCAGCTGCGCGGCGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CAA 72 bp CTCAGACCAGGTGGGCCAGGATCACCTGTGTGTCCCTaGAAGCCCGGTGGACCTCTGGCTCCCTCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: LRPGGPGSPVCP*KPGGPLAPSAP
Trigger: AGGAGCAGAGGGAGCCAGAGGTCCACCGGGCTTCAAGGGACACACAGGTGATCCTGGCCCACCTGGTCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CAA 90 bp GGTTCTCCCCTCAGACCAGGTGGGCCAGGATCACCTGTGTGTCCCTaGAAGCCCGGTGGACCTCTGGCTCCCTCTGCTCCTGATAGGCCT +
Preference number: 6 (lower is better)
Translates to: GSPLRPGGPGSPVCP*KPGGPLAPSAPDRP
Trigger: AGGCCTATCAGGAGCAGAGGGAGCCAGAGGTCCACCGGGCTTCAAGGGACACACAGGTGATCCTGGCCCACCTGGTCTGAGGGGAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CAA 90 bp CTGCTTGCCTTCTTCTCCTGGGACTCCTGGGATGCCAGATGGACCTaGGGGACCAGGAGGGCCTTCTTTGCCCTGAGGCCCTTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: LLAFFSWDSWDARWT*GTRRAFFALRPLRS
Trigger: GGACCTCAAGGGCCTCAGGGCAAAGAAGGCCCTCCTGGTCCCCAAGGTCCATCTGGCATCCCAGGAGTCCCAGGAGAAGAAGGCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp CGCGCAGCTGCCTTCACCTCCTCGCGAGAGTTGAAGTaGCCCAGTTCAAAGGCTGTAGTGGGCCGGTCACTG +
Preference number: 6 (lower is better)
Translates to: RAAAFTSSRELK*PSSKAVVGRSL
Trigger: CAGTGACCGGCCCACTACAGCCTTTGAACTGGGCCACTTCAACTCTCGCGAGGAGGTGAAGGCAGCTGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CCA 72 bp GTGATCCACTGCTGCCCGGTGGTCCCCTTGTTCCTCTaGGACCCTGTGGTCCAGCAGGTCCAGTGTCACCAT +
Preference number: 6 (lower is better)
Translates to: VIHCCPVVPLFL*DPVVQQVQCHH
Trigger: ATGGTGACACTGGACCTGCTGGACCACAGGGTCCCAGAGGAACAAGGGGACCACCGGGCAGCAGTGGATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CAA 90 bp TTGCCCGGTTCTCCAGGGGGACCTGGCTTTCCATCTCTGCCCTGCTaGCCTTCTTCTCCTGGGACTCCTGGGATGCCAGATGGACCTTGG +
Preference number: 6 (lower is better)
Translates to: LPGSPGGPGFPSLPC*PSSPGTPGMPDGPW
Trigger: CCAAGGTCCATCTGGCATCCCAGGAGTCCCAGGAGAAGAAGGCAAGCAGGGCAGAGATGGAAAGCCAGGTCCCCCTGGAGAACCGGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp ATGGGCCCTTCACATTACTTGGCCGGGCAGCAAGGCTaGCAAAGTACGCACACTGGGAGGGGTCACACAGGC +
Preference number: 6 (lower is better)
Translates to: MGPSHYLAGQQG*QSTHTGRGHTG
Trigger: GCCTGTGTGACCCCTCCCAGTGTGCGTACTTTGCCAGCCTTGCTGCCCGGCCAAGTAATGTGAAGGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 72 bp AACAGCAAAAATGCGGATGCCGGCTGCATGGGCAGCTaGTGCAGCATCCAGCACCAGGTCTTGGCTACGACC +
Preference number: 6 (lower is better)
Translates to: NSKNADAGCMGS*CSIQHQVLATT
Trigger: GGTCGTAGCCAAGACCTGGTGCTGGATGCTGCAGCAGCTGCCCATGCAGCCGGCATCCGCATTTTTGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS GCA 72 bp TTCCTGGTGATCCATCCCTTCCAGAGGGTCCTGCTATaGCAGGTTCTCCCCTCAGACCAGGTGGGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: FLVIHPFQRVLL*QVLPSDQVGQD
Trigger: ATCCTGGCCCACCTGGTCTGAGGGGAGAACCTGGCATAGCAGGACCCTCTGGAAGGGATGGATCACCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 72 bp GCCCATCTTTTCCAGGGGGTCCAGGAGGTCCGGGTCTaGCTTGAGAGGACTTCATGTGTGCTGGAGGCATCT +
Preference number: 6 (lower is better)
Translates to: AHLFQGVQEVRV*LERTSCVLEAS
Trigger: AGATGCCTCCAGCACACATGAAGTCCTCTCAAGGCAGACCCGGACCTCCTGGACCCCCTGGAAAAGATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp GGGGGCCTCGGAAGACCACCCGGACAGCATCCTTCATaGCACCCACAGCGTTGTACTCAACTGCCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: GGLGRPPGQHPS*HPQRCTQLPCS
Trigger: AGAACAAGGCAGTTGAGTACAACGCTGTGGGTGCCATGAAGGATGCTGTCCGGGTGGTCTTCCGAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CCA 72 bp GTACGCCACTTTCGCCAGAGTCTCCTGGTTCTCCCTTaGAGCCAGGAAGGCCTGGTGGTCCATTCAGCCCAT +
Preference number: 6 (lower is better)
Translates to: VRHFRQSLLVLP*SQEGLVVHSAH
Trigger: ATGGGCTGAATGGACCACCAGGCCTTCCTGGCTCCAAGGGAGAACCAGGAGACTCTGGCGAAAGTGGCGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp CTCCTTTCCTGGAGCTCCTACCTCTCCTGCTTCTCCTaGAGGTCCACGAGGACCCTGAAACCCTGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: LLSWSSYLSCFS*RSTRTLKPWKS
Trigger: GGACTTCCAGGGTTTCAGGGTCCTCGTGGACCTCCAGGAGAAGCAGGAGAGGTAGGAGCTCCAGGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CAA 72 bp TCTCCAGGGGGACCTGGCTTTCCATCTCTGCCCTGCTaGCCTTCTTCTCCTGGGACTCCTGGGATGCCAGAT +
Preference number: 6 (lower is better)
Translates to: SPGGPGFPSLPC*PSSPGTPGMPD
Trigger: ATCTGGCATCCCAGGAGTCCCAGGAGAAGAAGGCAAGCAGGGCAGAGATGGAAAGCCAGGTCCCCCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CAA 72 bp GGTCACCTTTGGCTCCTCTTTCACCTTTGGGGCCCATaGGTCCAGAGGGTCCTTCCAGACCACCTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: GHLWLLFHLWGP*VQRVLPDHLGQ
Trigger: CTGGCCAAGGTGGTCTGGAAGGACCCTCTGGACCAATGGGCCCCAAAGGTGAAAGAGGAGCCAAAGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CAA 90 bp CCTCGGAAGACCACCCGGACAGCATCCTTCATGGCACCCACAGCGTaGTACTCAACTGCCTTGTTCTCACCATCCAGCCGGATAGAGACC +
Preference number: 6 (lower is better)
Translates to: PRKTTRTASFMAPTA*YSTALFSPSSRIET
Trigger: GGTCTCTATCCGGCTGGATGGTGAGAACAAGGCAGTTGAGTACAACGCTGTGGGTGCCATGAAGGATGCTGTCCGGGTGGTCTTCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS GCA 72 bp CCTCCTTCAATGCTGCACCCACACCAACAGCAAAAATaGGGATGCCGGCTGCATGGGCAGCTGCTGCAGCAT +
Preference number: 6 (lower is better)
Translates to: PPSMLHPHQQQK*GCRLHGQLLQH
Trigger: ATGCTGCAGCAGCTGCCCATGCAGCCGGCATCCGCATTTTTGCTGTTGGTGTGGGTGCAGCATTGAAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS GCA 72 bp GAGGACCCATCTCTCCTCGGAGACCAACTCCAGGTGTaGCAGGGTCACCTTTGGCTCCTCTTTCACCTTTGG +
Preference number: 6 (lower is better)
Translates to: EDPSLLGDQLQV*QGHLWLLFHLW
Trigger: CCAAAGGTGAAAGAGGAGCCAAAGGTGACCCTGGCACACCTGGAGTTGGTCTCCGAGGAGAGATGGGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp CTGGTCTCCTTTCTCTCCATGTACTCCTGGGAAGCCTaGAGCACCCGGAAGGCCAACTTCTCCCTTCTCACC +
Preference number: 6 (lower is better)
Translates to: LVSFLSMYSWEA*STRKANFSLLT
Trigger: GGTGAGAAGGGAGAAGTTGGCCTTCCGGGTGCTCCAGGCTTCCCAGGAGTACATGGAGAGAAAGGAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp TGGAGGTCCACGAGGACCCTGAAACCCTGGAAGTCCTaGGCTGCCACTTTCTCCTTTGTTTCCCTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: WRSTRTLKPWKS*AATFSFVSLLA
Trigger: GGCCAGAAGGGAAACAAAGGAGAAAGTGGCAGCCCAGGACTTCCAGGGTTTCAGGGTCCTCGTGGACCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CAA 72 bp ACCACCCGGACAGCATCCTTCATGGCACCCACAGCGTaGTACTCAACTGCCTTGTTCTCACCATCCAGCCGG +
Preference number: 6 (lower is better)
Translates to: TTRTASFMAPTA*YSTALFSPSSR
Trigger: CCGGCTGGATGGTGAGAACAAGGCAGTTGAGTACAACGCTGTGGGTGCCATGAAGGATGCTGTCCGGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CAA 72 bp GGAGAGCCAGGAATCCCAGGTGTTCCTCGGTCACCCTaGATTCCTAAGGGACCAGGTAACCCAGGTGGTCCA +
Preference number: 6 (lower is better)
Translates to: GEPGIPGVPRSP*IPKGPGNPGGP
Trigger: TGGACCACCTGGGTTACCTGGTCCCTTAGGAATCAAGGGTGACCGAGGAACACCTGGGATTCCTGGCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159993.8
ENSMUST00000160513.2
ENSMUST00000229585.2
CDS CCA 72 bp TTTCTCCCTTGGGTCCAGGAGCACCCATTAGTCCAATaGGTCCTGCATCTCCCTTCTGACCAGGGAGTCCCA +
Preference number: 6 (lower is better)
Translates to: FLPWVQEHPLVQ*VLHLPSDQGVP
Trigger: TGGGACTCCCTGGTCAGAAGGGAGATGCAGGACCCATTGGACTAATGGGTGCTCCTGGACCCAAGGGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CCA 72 bp TCCATCTTTAGCGTATCCAGGTTCCCCAGGTTGGCCTaGTATTCCAGGAGGACCCATCTCTCCTCGGAGACC +
Preference number: 6 (lower is better)
Translates to: SIFSVSRFPRLA*YSRRTHLSSET
Trigger: GGTCTCCGAGGAGAGATGGGTCCTCCTGGAATACCAGGCCAACCTGGGGAACCTGGATACGCTAAAGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp GGAAGTCCATCTTTAGCGTATCCAGGTTCCCCAGGTTaGCCTGGTATTCCAGGAGGACCCATCTCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: GSPSLAYPGSPG*PGIPGGPISPR
Trigger: CCGAGGAGAGATGGGTCCTCCTGGAATACCAGGCCAACCTGGGGAACCTGGATACGCTAAAGATGGACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS TCA 72 bp CCCTCTCACCCTTTTCTCCAGGAGGGCATGAGCAGTTaGTGGTCTTCAAGAACCCGATCTGTTCGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: PSHPFLQEGMSS*WSSRTRSVRSQ
Trigger: CTGGGAGCGAACAGATCGGGTTCTTGAAGACCATCAACTGCTCATGCCCTCCTGGAGAAAAGGGTGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS GCA 72 bp GGCTCGCCAGGATCACCTTTCTCTCCTTTAGGCCCTTaGTCTCCTGGCATTCTTGGGTGTGGTGTGAACACT +
Preference number: 6 (lower is better)
Translates to: GSPGSPFSPLGP*SPGILGCGVNT
Trigger: AGTGTTCACACCACACCCAAGAATGCCAGGAGAGCAAGGGCCTAAAGGAGAGAAAGGTGATCCTGGCGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CAA 72 bp TCCTTCATGGCACCCACAGCGTTGTACTCAACTGCCTaGTTCTCACCATCCAGCCGGATAGAGACCTGTGGG +
Preference number: 6 (lower is better)
Translates to: SFMAPTALYSTA*FSPSSRIETCG
Trigger: CCCACAGGTCTCTATCCGGCTGGATGGTGAGAACAAGGCAGTTGAGTACAACGCTGTGGGTGCCATGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CAA 72 bp CCCCTCTCACCCTTTTCTCCAGGAGGGCATGAGCAGTaGATGGTCTTCAAGAACCCGATCTGTTCGCTCCCA +
Preference number: 6 (lower is better)
Translates to: PLSPFSPGGHEQ*MVFKNPICSLP
Trigger: TGGGAGCGAACAGATCGGGTTCTTGAAGACCATCAACTGCTCATGCCCTCCTGGAGAAAAGGGTGAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CAA 72 bp AGGCTCGCCAGGATCACCTTTCTCTCCTTTAGGCCCTaGCTCTCCTGGCATTCTTGGGTGTGGTGTGAACAC +
Preference number: 6 (lower is better)
Translates to: RLARITFLSFRP*LSWHSWVWCEH
Trigger: GTGTTCACACCACACCCAAGAATGCCAGGAGAGCAAGGGCCTAAAGGAGAGAAAGGTGATCCTGGCGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS GCA 72 bp AGCATCCTTCATGGCACCCACAGCGTTGTACTCAACTaGCTTGTTCTCACCATCCAGCCGGATAGAGACCTG +
Preference number: 6 (lower is better)
Translates to: SILHGTHSVVLN*LVLTIQPDRDL
Trigger: CAGGTCTCTATCCGGCTGGATGGTGAGAACAAGGCAGTTGAGTACAACGCTGTGGGTGCCATGAAGGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CAA 72 bp AGGGACACATTCTGGGCCTGGATGCTTAGAGCCATCTaGTGCCAGTCACGGTCAAAGAGGTCATCAACTCGG +
Preference number: 6 (lower is better)
Translates to: RDTFWAWMLRAI*CQSRSKRSSTR
Trigger: CCGAGTTGATGACCTCTTTGACCGTGACTGGCACAAGATGGCTCTAAGCATCCAGGCCCAGAATGTGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS TCA 72 bp AGCAAAGCCCCTCTCACCCTTTTCTCCAGGAGGGCATaGGCAGTTGATGGTCTTCAAGAACCCGATCTGTTC +
Preference number: 6 (lower is better)
Translates to: SKAPLTLFSRRA*AVDGLQEPDLF
Trigger: GAACAGATCGGGTTCTTGAAGACCATCAACTGCTCATGCCCTCCTGGAGAAAAGGGTGAGAGGGGCTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS TCA 72 bp GCAAGTTTAGCTTCTAGCTGCTTCCCAAGCTCTTCCTaGATGAGGCGCCGTAAGGTGTCCATGGATGGAGAC +
Preference number: 6 (lower is better)
Translates to: ASLASSCFPSSS*MRRRKVSMDGD
Trigger: GTCTCCATCCATGGACACCTTACGGCGCCTCATTCAGGAAGAGCTTGGGAAGCAGCTAGAAGCTAAACTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159993.8
ENSMUST00000229585.2
CDS CCA 72 bp CCATCCAGCCGGATAGAGACCTGTGGGATGCCATACTaGTCAATGACTTGCCAGATGTACCAATCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: PSSRIETCGMPY*SMTCQMYQSSF
Trigger: GAAAGAAGATTGGTACATCTGGCAAGTCATTGACCAGTATGGCATCCCACAGGTCTCTATCCGGCTGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS TCA 72 bp CTTCTTTCCGTGATGTTTTCCGGAACCGGAAAGTTGTaGCAAAGGCATACTCATCAGGAAGACCTTGGGGAA +
Preference number: 6 (lower is better)
Translates to: LLSVMFSGTGKL*QRHTHQEDLGE
Trigger: TTCCCCAAGGTCTTCCTGATGAGTATGCCTTTGTCACAACTTTCCGGTTCCGGAAAACATCACGGAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS CAA 72 bp GAAAGTTGTGACAAAGGCATACTCATCAGGAAGACCTaGGGGAAACACATCTTCAGTTCTCTGCACCACAGG +
Preference number: 6 (lower is better)
Translates to: ESCDKGILIRKT*GKHIFSSLHHR
Trigger: CCTGTGGTGCAGAGAACTGAAGATGTGTTTCCCCAAGGTCTTCCTGATGAGTATGCCTTTGTCACAACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS TCA 72 bp GTCAATGACTTGCCAGATGTACCAATCTTCTTTCCGTaGTGTTTTCCGGAACCGGAAAGTTGTGACAAAGGC +
Preference number: 6 (lower is better)
Translates to: VNDLPDVPIFFP*CFPEPESCDKG
Trigger: GCCTTTGTCACAACTTTCCGGTTCCGGAAAACATCACGGAAAGAAGATTGGTACATCTGGCAAGTCATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS GCA 72 bp GGTCAAAATCAATGGGAACGCTGTCATAGAGACGTTTaGCAATCACAGTCTTGCCCTGGATGTCGATATTCT +
Preference number: 6 (lower is better)
Translates to: GQNQWERCHRDV*QSQSCPGCRYS
Trigger: AGAATATCGACATCCAGGGCAAGACTGTGATTGGCAAACGTCTCTATGACAGCGTTCCCATTGATTTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8
CDS GCA 72 bp ATAGAGACCTGTGGGATGCCATACTGGTCAATGACTTaGCAGATGTACCAATCTTCTTTCCGTGATGTTTTC +
Preference number: 6 (lower is better)
Translates to: IETCGMPYWSMT*QMYQSSFRDVF
Trigger: GAAAACATCACGGAAAGAAGATTGGTACATCTGGCAAGTCATTGACCAGTATGGCATCCCACAGGTCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159993.8