Pregenerated sensors for COL1A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029661Ensembl transcript IDs: ENSMUST00000031668.10, ENSMUST00000141483.8
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTTTGGAACCATGGGCAAGAAGGAAAATGAGGCTGTTAAAGAATaGATGCTGAATCTAATGAAGAGAGAACCTGGGGCAAGTGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: FFGTMGKKENEAVKE*MLNLMKREPGASGL Trigger: CAGGCCACTTGCCCCAGGTTCTCTCTTCATTAGATTCAGCATTCATTCTTTAACAGCCTCATTTTCCTTCTTGCCCATGGTTCCAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR-3UTR TCA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGTATTGCACACTGCTCTaGCCAATCCTTCTCTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKYCTLL*PILLFC Trigger: GCAAAAGAGAAGGATTGGTCAGAGCAGTGTGCAATA...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR-3UTR TCA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGTTTTCTTACAAAGGTTaGCAATGTCCACAACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKFSYKG*QCPQQV Trigger: CACCTGTTGTGGACATTGTCAACCTTTGTAAGAAAA...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR-3UTR CCA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCGGGAGGAGACTTAGTTaGATCATATTGCACACTGCT | + |
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Preference number: 2 (lower is better) Translates to: SHTMHINVEDCFFCNSSSGRRLS*IILHTA Trigger: AGCAGTGTGCAATATGATCCAACTAAGTCTCCTCCC...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR CCA 72 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTaGGATGGTCTACACTCACTGCAAAGTGTCTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: VPQFVSALVNSH*DGLHSLQSVLR Trigger: CCTCAAGACACTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR-3UTR CAA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTAACACTGCAAACATTTaGGGGAGGGGCCAAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: VLNFPLWKIVRSHKWCECNTANI*GRGQGR Trigger: CCTCCCTTGGCCCCTCCCCAAAATGTTTGCAGTGTT...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR-3UTR CAA 90 bp | AATCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCACAGTTCGTGTCAGCCTaGGTCAACTCTCATTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: NHTQCTSMWRIVSSVILPQFVSA*VNSHWD Trigger: ATCCCAATGAGAGTTGACCAAGGCTGACACGAACTG...TGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR-3UTR CAA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCGTTTTCTTACAAAGGTaGACAATGTCCACAACAGGT | + |
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Preference number: 3 (lower is better) Translates to: SHTMHINVEDCFFCNSSSVFLQR*TMSTTG Trigger: ACCTGTTGTGGACATTGTCAACCTTTGTAAGAAAAC...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR GCA 72 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATaGATAGAAGACATGGAAGGATTCAGCTTTCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: QSFSFAHSLRCR*IEDMEGFSFQF Trigger: AAACTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGGCCTCGGGCACCAGCTaGACCAGGAGCTCCGACACG | + |
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Preference number: 4 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKASGTS*TRSSDT Trigger: CGTGTCGGAGCTCCTGGTCCAGCTGGTGCCCGAGGC...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGGCACCAGGAGGGCCTaGGATGCCCAGAGGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCGTRRA*DAQRTR Trigger: CCTGGTCCTCTGGGCATCTCAGGCCCTCCTGGTGCC...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGCCCTTGTGTCCAGGCTaGCCATCACGACCTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKPLCPG*PSRPGG Trigger: TCCCCCAGGTCGTGATGGTCAGCCTGGACACAAGGG...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGGGACCAGGAGGACCTTaGGCTCCAACAGAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKGPGGP*APTEPG Trigger: GCCTGGCTCTGTTGGAGCCCAAGGTCCTCCTGGTCC...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCATCCAGTTCGGCCAACTaGACCTTGGTCGCCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: VPQFVSALVNSHWDGLHSSSSAN*TLVATG Trigger: CCCCGTGGCGACCAAGGTCCAGTTGGCCGAACTGGA...TGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGCTGACCATCACGACCTaGGGGACCATCGCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKLTITT*GTIAAR Trigger: CCTGGCAGCGATGGTCCCCCAGGTCGTGATGGTCAG...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCAAGCCCTGGAGGCCCTaGAGGGCCAGCAGATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCKPWRP*RASRSS Trigger: GCTGGATCTGCTGGCCCTGCAGGGCCTCCAGGGCTT...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | TTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAGGGACCAGGAGCACCTaGGAAACCAGGGGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LGFKLPSVEDSQKPQVVRGTRST*ETRGSS Trigger: GCTGGACCCCCTGGTTTCCCAGGTGCTCCTGGTCCC...TCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCCGGCCAACTGGACCTTaGTCGCCACGGGGACCACGA | + |
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Preference number: 4 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCRPTGP*SPRGPR Trigger: TCGTGGTCCCCGTGGCGACCAAGGTCCAGTTGGCCG...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | TTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTCATGGGTTCATCCTCACCAGCCTTaGCAGGAGAGCCAGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: FPLWKIVRSHKWCECSWVHPHQP*QESQLD Trigger: GTCCAGCTGGCTCTCCTGGCAAGGCTGGTGAGGATG...AACCCATGAACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTCTCTCACCAGGTTTaGCAGGATCACCAGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VPQFVSALVNSHWDGLHSLSHQV*QDHQRG Trigger: GCCCCTCTGGTGATCCTGGCAAACCTGGTGAGAGAG...TGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGTCCAGCTGGGCCGATTaGGCCAGGTCTGCCATCAAT | + |
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Preference number: 4 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKSSWAD*ARSAIN Trigger: ATTGATGGCAGACCTGGCCCAATCGGCCCAGCTGGA...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR CAA 72 bp | GGGAGGGGCCAAGGGAGGAGACTTAGTTGGATCATATaGCACACTGCTCTGACCAATCCTTCTCTTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GRGQGRRLSWII*HTALTNPSLLP Trigger: GGGCAAAAGAGAAGGATTGGTCAGAGCAGTGTGCAATATGATCCAACTAAGTCTCCTCCCTTGGCCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGGGACCCACAGAACCGTaGGGACCAGGGGCACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQGPTEP*GPGAPA Trigger: TGCAGGTGCCCCTGGTCCTCACGGTTCTGTGGGTCC...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGATCCACTCTGGGTGGCTaGGTCTTAAGTCCCGGCACG | + |
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Preference number: 4 (lower is better) Translates to: LGFKLPSVEDSQKPQVVRSTLGG*VLSPGT Trigger: CGTGCCGGGACTTAAGACTCAGCCACCCAGAGTGGA...TCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGGGCTCCTGCTTGACCTaGAGTTCCATTCTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKGSCLT*SSILSR Trigger: CCTGGAGAGAATGGAACTCCAGGTCAAGCAGGAGCC...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGGTCCAGCAGACCCAATaGGACCAGCAGGGCCGACGG | + |
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Preference number: 4 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQVQQTQ*DQQGRR Trigger: CCGTCGGCCCTGCTGGTCCCATTGGGTCTGCTGGAC...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCAAGGGCCAGAAAGACCTaGAAGACCCACTTCACCACG | + |
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Preference number: 4 (lower is better) Translates to: VPQFVSALVNSHWDGLHSRARKT*KTHFTT Trigger: CGTGGTGAAGTGGGTCTTCCAGGTCTTTCTGGCCCT...TGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGTTCCACTCTGGGTaGCTGAGTCTTAAGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: VPQFVSALVNSHWDGLHSLFHSG*LSLKSR Trigger: CCGGGACTTAAGACTCAGCCACCCAGAGTGGAACAG...TGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTCTTTGCCCCCAGGTATaGCAGCAGCACCCCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VLNFPLWKIVRSHKWCECLCPQV*QQHPSL Trigger: GAGAGAGGGGTGCTGCTGGCATACCTGGGGGCAAAG...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTACAGCACCAGGAATaGCACGAGCACCATCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: VPQFVSALVNSHWDGLHSLQHQE*HEHHLY Trigger: GTAGAGATGGTGCTCGTGGCATTCCTGGTGCTGTAG...TGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTCAGGAGGGCCTGAGATaGCCAGAGGACCAGGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: VLNFPLWKIVRSHKWCECQEGLR*PEDQVH Trigger: GTGAACCTGGTCCTCTGGGCATCTCAGGCCCTCCTG...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTAGGACCAGGGGCACCTaGAGCACCAGTCGGACCAAT | + |
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Preference number: 4 (lower is better) Translates to: VLNFPLWKIVRSHKWCECRTRGT*STSRTN Trigger: ATTGGTCCGACTGGTGCTGCAGGTGCCCCTGGTCCT...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | TTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGATCTCCTAACCAGACATaGTTGTTGGCCTGGGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: LGFKLPSVEDSQKPQVVRSPNQT*LLAWAR Trigger: CCGCGCCCAGGCCAACAAGCATGTCTGGTTAGGAGA...TCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGCTGCCTCTAAGCCCTaGAGGCCCTGCAGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QSFSFAHSLRCRCIEDMEAASKP*RPCRAS Trigger: GCTGGCCCTGCAGGGCCTCCAGGGCTTAGAGGCAGC...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTGCCAGCTTCACCTCTTaGTCCAGCTGGGCCGATTGG | + |
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Preference number: 4 (lower is better) Translates to: VLNFPLWKIVRSHKWCECASFTS*SSWADW Trigger: CCAATCGGCCCAGCTGGACCAAGAGGTGAAGCTGGC...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | TTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAACCACGTTCTCCTCTTaGACCAGCAGGACCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LGFKLPSVEDSQKPQVVRTTFSS*TSRTRE Trigger: CTCCCTGGTCCTGCTGGTCCAAGAGGAGAACGTGGT...TCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTCATAGTCCTTGGGTCTaGGTGAAGGCTGGGAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: VLNFPLWKIVRSHKWCECHSPWV*VKAGSE Trigger: CTCGCTCCCAGCCTTCACTCAGACCCAAGGACTATG...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCCATTTGTTCCAGGGTTaGCAGGAGGTCCAACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCHLFQG*QEVQQG Trigger: GCCCTGTTGGACCTCCTGGCAACCCTGGAACAAATG...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCAAGACCCTGAGGACCTaGGGTACCAGGGGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SHTMHINVEDCFFCNSSSKTLRT*GTRGSC Trigger: GCAGGAGCCCCTGGTACCGCAGGTCCTCAGGGTCTT...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCCACCAGGAGGGCCTCTaGGTCCCATTAAACCCATTG | + |
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Preference number: 4 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCHQEGL*VPLNPL Trigger: CAATGGGTTTAATGGGACCCAGAGGCCCTCCTGGTG...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGACCTCTTGGTCCAGCTaGGCCGATTGGGCCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQTSWSS*ADWARS Trigger: AGACCTGGCCCAATCGGCCCAGCTGGACCAAGAGGT...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | TTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTCATGGGTTGGGGTGTTTACAGGTTaGGCCTGGATGCAGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FPLWKIVRSHKWCECSWVGVFTG*AWMQVS Trigger: TGAAACCTGCATCCAGGCCCAACCTGTAAACACCCC...AACCCATGAACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGACCTCTGGGTCCCATaGGACCAGGTTCCCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: QSFSFAHSLRCRCIEDMEDLWVP*DQVPQV Trigger: GACCTGGGGAACCTGGTCTCATGGGACCCAGAGGTC...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGCACCAAGAAGACCCTaGGGACCTGCGGTACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QSFSFAHSLRCRCIEDMEAPRRP*GPAVPG Trigger: CCCTGGTACCGCAGGTCCTCAGGGTCTTCTTGGTGC...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAACATAGCCACCTCCGCTaGCACCAGGAGGACCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QSFSFAHSLRCRCIEDMEHSHLR*HQEDQE Trigger: CTCCTGGTCCTCCTGGTGTCAGCGGAGGTGGCTATG...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTCTAGGACAGAGTAGGTaGACCTGCTGTTGCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLNFPLWKIVRSHKWCECLGQSR*TCCCPQ Trigger: CTGAGGGCAACAGCAGGTTCACCTACTCTGTCCTAG...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCCAGGGAATCCGATGTTaGCAGCTTCACCTCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCQGIRC*QLHLLV Trigger: GACCAAGAGGTGAAGCTGGCAACATCGGATTCCCTG...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | TTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAGAAGGCGAGCTGAGTTaGCATTTCCTTGGAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGFKLPSVEDSQKPQVVREGELS*HFLGGH Trigger: GTGTCCTCCAAGGAAATGGCAACTCAGCTCGCCTTC...TCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | TTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTCATGGGTTACATCGTTGGAACCCTaGAGAAGCACAGCCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPLWKIVRSHKWCECSWVTSLEP*RSTALF Trigger: GAACAAGGCTGTGCTTCTGCAGGGTTCCAACGATGT...AACCCATGAACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTACCGGATTCTCCTTTaGAGCCAGCAGGACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLNFPLWKIVRSHKWCECYRILL*SQQDQA Trigger: AGCCTGGTCCTGCTGGCTCCAAAGGAGAATCCGGTA...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAAGCACCCCTCTCTCCTaGAAGCCCACCAGGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSFSFAHSLRCRCIEDMESTPLS*KPTRPR Trigger: TCTGGGCCTGGTGGGCTTCCAGGAGAGAGGGGTGCT...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | TTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAACCACTAGGACCTCTTaGACCAACAGCACCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFKLPSVEDSQKPQVVRTTRTS*TNSTNR Trigger: CCTGTTGGTGCTGTTGGTCCAAGAGGTCCTAGTGGT...TCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| 3UTR CAA 72 bp | AGTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATaGGGATGGTCTACACTCACTGCAAAGTGTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: STSVRVSLGQLS*GWSTLTAKCLE Trigger: CTCAAGACACTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAACCGGGTTTTCCAGGGTaGCCATCCTCACCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSFSFAHSLRCRCIEDMEPGFPG*PSSPAL Trigger: CAAGGCTGGTGAGGATGGTCACCCTGGAAAACCCGG...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGGTCCTTTCACGCCTTTaGAGCCAGGAAGTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQVLSRL*SQEVQE Trigger: CTCCTGGACTTCCTGGCTTCAAAGGCGTGAAAGGAC...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCACCACGAGCACCCTGTaGTCCAACGACTCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHTMHINVEDCFFCNSSSTTSTL*SNDSSL Trigger: GAGAGAGGAGTCGTTGGACCACAGGGTGCTCGTGGT...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | AATCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGGACCAGGGAGACCCTaGAAGCCAGGAGGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NHTQCTSMWRIVSSVILPGPGRP*KPGGPA Trigger: TGCTGGTCCTCCTGGCTTCCAGGGTCTCCCTGGTCC...TGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CCA 90 bp | AATCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGTTTCCATCAGGCCCTaGGGCTCCACTGGGACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NHTQCTSMWRIVSSVILPVSIRP*GSTGTS Trigger: CGAGGTCCCAGTGGAGCCCCAGGGCCTGATGGAAAC...TGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR TCA 90 bp | AATCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGGTCCTTGGAAACCTTaGGGGCCAGGGGCTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: NHTQCTSMWRIVSSVILPGPWKP*GPGAPT Trigger: TGTTGGAGCCCCTGGCCCTCAAGGTTTCCAAGGACC...TGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR GCA 90 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACGTACTGATCCCGATTaGAAATATTGGCATGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPQFVSALVNSHWDGLHSRTDPD*KYWHVA Trigger: AGCAACATGCCAATATTTGCAATCGGGATCAGTACG...TGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCGGCCTTGTTCACCTTTaGCACCTTGAACACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHTMHINVEDCFFCNSSSGLVHL*HLEHPG Trigger: CCCAGGGTGTTCAAGGTGGCAAAGGTGAACAAGGCC...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR GCA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGCATCTCTACCAGTGTTaGCAGTGTCACCTCGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQHLYQC*QCHLGD Trigger: GTCTCCGAGGTGACACTGGCAACACTGGTAGAGATG...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR GCA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAACACCAGTCGGACCAATaGTGCCAGGGTAACCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSFSFAHSLRCRCIEDMEHQSDQ*CQGNHA Trigger: AGCGTGGTTACCCTGGCAGCATTGGTCCGACTGGTG...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | AATCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCCCAAGTTCACCCTTaGGACCAGGAGCACCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NHTQCTSMWRIVSSVILPAQVHP*DQEHLG Trigger: TCCCAGGTGCTCCTGGTCCCAAGGGTGAACTTGGGC...TGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CCA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGAGCACCAGCAATACCTaGCAGACCACGTTCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQSTSNT*QTTFTS Trigger: AGAGGTGAACGTGGTCTGCCAGGTATTGCTGGTGCT...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCCAAGTTCAACATCGTTaGAACCCTGCAGAAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCQVQHR*NPAEAQ Trigger: CTGTGCTTCTGCAGGGTTCCAACGATGTTGAACTTG...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR TCA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTCCTTTGTCAGAATACTaGGCAGCAAAGTTCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLNFPLWKIVRSHKWCECPLSEY*AAKFPV Trigger: TACTGGGAACTTTGCTGCTCAGTATTCTGACAAAGG...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAACCAGGAAGACCCCTGTaGCCTTTATCACCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSFSFAHSLRCRCIEDMEPGRPL*PLSPGS Trigger: AGAACCTGGTGATAAAGGGCACAGGGGTCTTCCTGG...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAACGGCAGGCGAGATaGCTTATTTGTTTTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCERQAR*LICFVF Trigger: GAATACAAAACAAATAAGCCATCTCGCCTGCCGTTC...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCTTTACAGGTTGGGCCTaGATGCAGGTTTCACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SHTMHINVEDCFFCNSSSFTGWA*MQVSPV Trigger: TACTGGTGAAACCTGCATCCAGGCCCAACCTGTAAA...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR GCA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCAGACCAGGAAGACCCTaGAATCCACTGTATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHTMHINVEDCFFCNSSSRPGRP*NPLYPF Trigger: AAAAGGATACAGTGGATTGCAGGGTCTTCCTGGTCT...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCCCCGATTGCAAATATTaGCATGTTGCTAGGCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHTMHINVEDCFFCNSSSPDCKY*HVARHE Trigger: TTCGTGCCTAGCAACATGCCAATATTTGCAATCGGG...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGATTCATTTGTCTTTTTaGAGCAGCCATCGACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQIHLSF*SSHRLG Trigger: TCCTAGTCGATGGCTGCTCCAAAAAGACAAATGAAT...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS-3UTR CCA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAAGAAGGGTCTCAATCTaGTTATTGAGAGATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSFSFAHSLRCRCIEDMERRVSI*LLRDFR Trigger: TCTGAAATCTCTCAATAACCAGATTGAGACCCTTCT...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS GCA 90 bp | ACCCAATGGGACCAGCAGGGCCGACGGGGCCAACGCTTCCATCACTaGCTCGGGCACCAGCTGGACCAGGAGCTCCGACACGCCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TQWDQQGRRGQRFHH*LGHQLDQELRHALS Trigger: AGAGAGGGCGTGTCGGAGCTCCTGGTCCAGCTGGTGCCCGAGGCAGTGATGGAAGCGTTGGCCCCGTCGGCCCTGCTGGTCCCATTGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS GCA 90 bp | AGGAAGACCTCGAGAACCAGGGCTGCCTCTAAGCCCTGGAGGCCCTaGAGGGCCAGCAGATCCAGCTTCTCCGGGAGACCCTCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKTSRTRAASKPWRP*RASRSSFSGRPSLS Trigger: GGAAAGAGAGGGTCTCCCGGAGAAGCTGGATCTGCTGGCCCTGCAGGGCCTCCAGGGCTTAGAGGCAGCCCTGGTTCTCGAGGTCTTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS GCA 90 bp | AGGGAGACCCAGAATACCGGGAGCACCAAGAAGACCCTGAGGACCTaGGGTACCAGGGGCTCCTGCGGTACCAGGTTCTCCAGAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RETQNTGSTKKTLRT*GTRGSCGTRFSRGT Trigger: GGTCCCTCTGGAGAACCTGGTACCGCAGGAGCCCCTGGTACCGCAGGTCCTCAGGGTCTTCTTGGTGCTCCCGGTATTCTGGGTCTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS TCA 90 bp | CTAGAGCCAGGGAGACCCAGAATACCGGGAGCACCAAGAAGACCCTaGGGACCTGCGGTACCAGGGGCTCCTGCGGTACCAGGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LEPGRPRIPGAPRRP*GPAVPGAPAVPGSP Trigger: TGGAGAACCTGGTACCGCAGGAGCCCCTGGTACCGCAGGTCCTCAGGGTCTTCTTGGTGCTCCCGGTATTCTGGGTCTCCCTGGCTCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 90 bp | GGGTCCAGGGAATCCGATGTTGCCAGCTTCACCTCTTGGTCCAGCTaGGCCGATTGGGCCAGGTCTGCCATCAATGCCAGGGAGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSRESDVASFTSWSS*ADWARSAINARETH Trigger: GTGGGTCTCCCTGGCATTGATGGCAGACCTGGCCCAATCGGCCCAGCTGGACCAAGAGGTGAAGCTGGCAACATCGGATTCCCTGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 90 bp | GGGGCCTTTGGGTCCAGGGAATCCGATGTTGCCAGCTTCACCTCTTaGTCCAGCTGGGCCGATTGGGCCAGGTCTGCCATCAATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAFGSRESDVASFTS*SSWADWARSAINAR Trigger: CCTGGCATTGATGGCAGACCTGGCCCAATCGGCCCAGCTGGACCAAGAGGTGAAGCTGGCAACATCGGATTCCCTGGACCCAAAGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 90 bp | TGGAGCACCGACTGCACCAGCTTCACCCTTGTTTCCATCAGGCCCTaGGGCTCCACTGGGACCTCGGCTTCCAATAGGACCAGAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WSTDCTSFTLVSIRP*GSTGTSASNRTRRA Trigger: GGCCCTTCTGGTCCTATTGGAAGCCGAGGTCCCAGTGGAGCCCCAGGGCCTGATGGAAACAAGGGTGAAGCTGGTGCAGTCGGTGCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 90 bp | GAATCCGATGTTGCCAGCTTCACCTCTTGGTCCAGCTGGGCCGATTaGGCCAGGTCTGCCATCAATGCCAGGGAGACCCACAGGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESDVASFTSWSSWAD*ARSAINARETHRAF Trigger: GAAGGCCCTGTGGGTCTCCCTGGCATTGATGGCAGACCTGGCCCAATCGGCCCAGCTGGACCAAGAGGTGAAGCTGGCAACATCGGATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 90 bp | GGGGGTCCAGATGCACCTGTTTCTCCAGTTCGGCCAACTGGACCTTaGTCGCCACGGGGACCACGAATCCCTTCCTTTCCAGCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GGPDAPVSPVRPTGP*SPRGPRIPSFPAAP Trigger: TGGTGCTGCTGGAAAGGAAGGGATTCGTGGTCCCCGTGGCGACCAAGGTCCAGTTGGCCGAACTGGAGAAACAGGTGCATCTGGACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 90 bp | AGGGTAACCACGCTCTCCCTTGTGTCCAGGCTGACCATCACGACCTaGGGGACCATCGCTGCCAGGGTTACCATCACGACCAGCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: RVTTLSLVSRLTITT*GTIAARVTITTSFT Trigger: GGTGAAGCTGGTCGTGATGGTAACCCTGGCAGCGATGGTCCCCCAGGTCGTGATGGTCAGCCTGGACACAAGGGAGAGCGTGGTTACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 90 bp | GGTGTCCTCTCTCACCAGGTTTGCCAGGATCACCAGAGGGGCCTTTaGGTCCAGGGAATCCGATGTTGCCAGCTTCACCTCTTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVLSHQVCQDHQRGL*VQGIRCCQLHLLVQ Trigger: CTGGACCAAGAGGTGAAGCTGGCAACATCGGATTCCCTGGACCCAAAGGCCCCTCTGGTGATCCTGGCAAACCTGGTGAGAGAGGACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 90 bp | AAATCCAGGGGGTCCAGATGCACCTGTTTCTCCAGTTCGGCCAACTaGACCTTGGTCGCCACGGGGACCACGAATCCCTTCCTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSRGSRCTCFSSSAN*TLVATGTTNPFLSS Trigger: GCTGGAAAGGAAGGGATTCGTGGTCCCCGTGGCGACCAAGGTCCAGTTGGCCGAACTGGAGAAACAGGTGCATCTGGACCCCCTGGATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 90 bp | GGGGACCTGCGGGACCCCTTTGTCCACGTGGTCCTCTGTCTCCAGTaGGGCCCTTTCGTACTGATCCCGATTGCAAATATTGGCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GDLRDPFVHVVLCLQ*GPFVLIPIANIGML Trigger: CAACATGCCAATATTTGCAATCGGGATCAGTACGAAAGGGCCCCACTGGAGACAGAGGACCACGTGGACAAAGGGGTCCCGCAGGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031668.10 ENSMUST00000141483.8 |
||
| CDS-3UTR CAA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGGGCCCAAGTTCACCCTaGGGACCAGGAGCACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKGPSSP*GPGAPG Trigger: CCCAGGTGCTCCTGGTCCCAAGGGTGAACTTGGGCC...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCTCGGCCAACTGGACCTaGGTCGCCACGGGGACCACG | + |
|
Preference number: 5 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCSANWT*VATGTT Trigger: CGTGGTCCCCGTGGCGACCAAGGTCCAGTTGGCCGA...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS GCA 90 bp | CACCTACAGCACCAGGAATGCCACGAGCACCATCTCTACCAGTGTTaGCAGTGTCACCTCGGAGACCAGTTTCACCCTTTTCTCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLQHQECHEHHLYQC*QCHLGDQFHPFLLC Trigger: GCAAAGGAGAAAAGGGTGAAACTGGTCTCCGAGGTGACACTGGCAACACTGGTAGAGATGGTGCTCGTGGCATTCCTGGTGCTGTAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 90 bp | GCCTGGGCGCGGCTGTATGAGTTCTTCGCTGGGGTGTTTACAGGTTaGGCCTGGATGCAGGTTTCACCAGTAGAGAAATCACAGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: AWARLYEFFAGVFTG*AWMQVSPVEKSQYT Trigger: AGTGTACTGTGATTTCTCTACTGGTGAAACCTGCATCCAGGCCCAACCTGTAAACACCCCAGCGAAGAACTCATACAGCCGCGCCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 90 bp | CTGCCACCATTGATAGTCTCTCCTAACCAGACATGCTTGTTGGCCTaGGCGCGGCTGTATGAGTTCTTCGCTGGGGTGTTTACAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPLIVSPNQTCLLA*ARLYEFFAGVFTGW Trigger: CCAACCTGTAAACACCCCAGCGAAGAACTCATACAGCCGCGCCCAGGCCAACAAGCATGTCTGGTTAGGAGAGACTATCAATGGTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTCATGGGTTACCTGCGGGACCCCTTaGTCCACGTGGTCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPLWKIVRSHKWCECSWVTCGTP*STWSSV Trigger: GACAGAGGACCACGTGGACAAAGGGGTCCCGCAGGT...AACCCATGAACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACCTCTCTCACCAGGTTaGCCAGGATCACCAGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPQFVSALVNSHWDGLHSPLSPG*PGSPEG Trigger: CCCCTCTGGTGATCCTGGCAAACCTGGTGAGAGAGG...TGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS GCA 90 bp | CGTGGTCCTCTGTCTCCAGTGGGGCCCTTTCGTACTGATCCCGATTaGAAATATTGGCATGTTGCTAGGCACGAAGTTACTGCAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGPLSPVGPFRTDPD*KYWHVARHEVTASS Trigger: GCTGCTTGCAGTAACTTCGTGCCTAGCAACATGCCAATATTTGCAATCGGGATCAGTACGAAAGGGCCCCACTGGAGACAGAGGACCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031668.10 ENSMUST00000141483.8 |
||
| CDS GCA 90 bp | TATTCAAACTGGCTGCCACCATTGATAGTCTCTCCTAACCAGACATaGTTGTTGGCCTGGGCGCGGCTGTATGAGTTCTTCGCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YSNWLPPLIVSPNQT*LLAWARLYEFFAGV Trigger: CACCCCAGCGAAGAACTCATACAGCCGCGCCCAGGCCAACAAGCATGTCTGGTTAGGAGAGACTATCAATGGTGGCAGCCAGTTTGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTCATGGGTTAGGTCCTTGGAAACCTaGAGGGCCAGGGGCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPLWKIVRSHKWCECSWVRSLET*RARGSN Trigger: GTTGGAGCCCCTGGCCCTCAAGGTTTCCAAGGACCT...AACCCATGAACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTCATGGGTTACCTGCAGGACCCGTTaGACCAGGCTCACCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FPLWKIVRSHKWCECSWVTCRTR*TRLTRF Trigger: GAACCTGGTGAGCCTGGTCAAACGGGTCCTGCAGGT...AACCCATGAACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTCATGGGTTTCACCAGAGGGGCCTTaGGGTCCAGGGAATCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: FPLWKIVRSHKWCECSWVSPEGP*GPGNPM Trigger: CATCGGATTCCCTGGACCCAAAGGCCCCTCTGGTGA...AACCCATGAACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGTTCACCTTTGCCACCTaGAACACCCTGGGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKFTFAT*NTLGSR Trigger: CCTGGACCCCAGGGTGTTCAAGGTGGCAAAGGTGAA...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCAAGGACCAGCAGGGCCTaGTTCACCTTTGCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPQFVSALVNSHWDGLHSRTSRA*FTFATL Trigger: CAAGGTGGCAAAGGTGAACAAGGCCCTGCTGGTCCT...TGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTCATGGGTTGCACCAGCTTCACCCTaGTTTCCATCAGGCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPLWKIVRSHKWCECSWVAPASP*FPSGPG Trigger: CCCAGGGCCTGATGGAAACAAGGGTGAAGCTGGTGC...AACCCATGAACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS TCA 90 bp | GAGAGATTTCAGAGTTGCATCAACTTCATAGTCCTTGGGTCTGAGTaGAGGCTGGGAGCGAGGCTGGTCAGCCCTGTAGAAGTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ERFQSCINFIVLGSE*RLGARLVSPVEVSF Trigger: GAAGGAGACTTCTACAGGGCTGACCAGCCTCGCTCCCAGCCTTCACTCAGACCCAAGGACTATGAAGTTGATGCAACTCTGAAATCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTCCATCCTCACCAGCCTaGCCAGGAGAGCCAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLNFPLWKIVRSHKWCECPSSPA*PGEPAG Trigger: TCCAGCTGGCTCTCCTGGCAAGGCTGGTGAGGATGG...ACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTACCTCAGTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACCAGGGAATCCGATGTaGCCAGCTTCACCTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VPQFVSALVNSHWDGLHSPGNPM*PASPLG Trigger: ACCAAGAGGTGAAGCTGGCAACATCGGATTCCCTGG...TGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAACTGAGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 90 bp | CTGTCTCCAGTGGGGCCCTTTCGTACTGATCCCGATTGCAAATATTaGCATGTTGCTAGGCACGAAGTTACTGCAAGCAGCAACAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPVGPFRTDPDCKY*HVARHEVTASSNRV Trigger: GACTCTGTTGCTGCTTGCAGTAACTTCGTGCCTAGCAACATGCCAATATTTGCAATCGGGATCAGTACGAAAGGGCCCCACTGGAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031668.10 ENSMUST00000141483.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCTACCACGTTCTCCTCTaGGACCAGCAGGACCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCYHVLL*DQQDQG Trigger: TCCCTGGTCCTGCTGGTCCAAGAGGAGAACGTGGTA...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGTCACCTCGGATGCCTaGAGGACCACTAGGACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCVTSDA*RTTRTS Trigger: AGAGGTCCTAGTGGTCCTCAAGGCATCCGAGGTGAC...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCCCCCTTTCTCCGGGCTaGCCAACTTCTCCAGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCPLSPG*PTSPVV Trigger: TACTACTGGAGAAGTTGGCAAGCCCGGAGAAAGGGG...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGTTCACCAGCAGGTCCTaGGAAACCTTGAGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQFTSRS*ETLRAR Trigger: CCTGGCCCTCAAGGTTTCCAAGGACCTGCTGGTGAA...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | AATCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGGGACCAGGAGGACCTaGGGCTCCAACAGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NHTQCTSMWRIVSSVILPGTRRT*GSNRAR Trigger: CCTGGCTCTGTTGGAGCCCAAGGTCCTCCTGGTCCC...TGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCTTACCGGATTCTCCTTaGGAGCCAGCAGGACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHTMHINVEDCFFCNSSSLPDSP*EPAGPG Trigger: GCCTGGTCCTGCTGGCTCCAAAGGAGAATCCGGTAA...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGTCACCCTTTTCTCCTTaGCCCCCAGGTATGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQSPFSP*PPGMPA Trigger: TGCTGGCATACCTGGGGGCAAAGGAGAAAAGGGTGA...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCTCACCCTTAGGCCCTTaGGTTCCCTTCTCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCSPLGP*VPFSPL Trigger: TAAAGGAGAGAAGGGAACCAAAGGGCCTAAGGGTGA...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTTCGTGTCAGCCTTGGTCAACTCTCATTGGGATGGTCTACACTCACTGCAAAGCATTCATTTGTCTTTTaGGAGCAGCCATCGACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRVSLGQLSLGWSTLTAKHSFVF*EQPSTR Trigger: CCTAGTCGATGGCTGCTCCAAAAAGACAAATGAATG...CTTTGCAGTGAGTGTAGACCATCCCAATGAGAGTTGACCAAGGCTGACACGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS TCA 90 bp | ATTCATTTGTCTTTTTGGAGCAGCCATCGACTAGGACAGAGTAGGTaGACCTGCTGTTGCCCTCAGCAACAAGTTCAACATCGTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IHLSFWSSHRLGQSR*TCCCPQQQVQHRWN Trigger: GTTCCAACGATGTTGAACTTGTTGCTGAGGGCAACAGCAGGTTCACCTACTCTGTCCTAGTCGATGGCTGCTCCAAAAAGACAAATGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGCTCCAACAGACCCGGTaGGACCAACAATGCCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQLQQTR*DQQCHF Trigger: AAAATGGCATTGTTGGTCCAACCGGGTCTGTTGGAG...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | CAATCCTTCTCTTTTGCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAATGTCCTTTCACGCCTTaGAAGCCAGGAAGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QSFSFAHSLRCRCIEDMECPFTP*KPGSPG Trigger: TCCTGGACTTCCTGGCTTCAAAGGCGTGAAAGGACA...TTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGCAAAAGAGAAGGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | AATCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCACCATCTCTACCAGTGTaGCCAGTGTCACCTCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NHTQCTSMWRIVSSVILPPSLPV*PVSPRR Trigger: TCTCCGAGGTGACACTGGCAACACTGGTAGAGATGG...TGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCGAATGTTCATGGGTTGTCTCAATCTGGTTATaGAGAGATTTCAGAGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPLWKIVRSHKWCECSWVVSIWL*RDFRVA Trigger: TGCAACTCTGAAATCTCTCAATAACCAGATTGAGAC...AACCCATGAACATTCGCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GCCCACAGTTTAAGATGTAGATGCATAGAAGACATGGAAGGATTCAGCTTTCAGACAAGTTCAACATCGTaGGAACCCTGCAGAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AHSLRCRCIEDMEGFSFQTSSTS*EPCRST Trigger: TGTGCTTCTGCAGGGTTCCAACGATGTTGAACTTGT...CTGAAAGCTGAATCCTTCCATGTCTTCTATGCATCTACATCTTAAACTGTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | GTTTGGGTTTTAAACTTCCCTCTGTGGAAGATAGTCAGAAGCCACAAGTGGTGCAAATCACAGTACACTTaGATGGCATCCATAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: VWVLNFPLWKIVRSHKWCKSQYT*MASIVH Trigger: ATGTACTATGGATGCCATCAAAGTGTACTGTGATTT...GCACCACTTGTGGCTTCTGACTATCTTCCACAGAGGGAAGTTTAAAACCCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS-3UTR CAA 90 bp | TCACACACAATGCACATCAATGTGGAGGATTGTTTCTTCTGTAATTCTTCCAGCTCTTGCCCCATTCATTaGTCTTTTTGGAGCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SHTMHINVEDCFFCNSSSSCPIH*SFWSSH Trigger: ATGGCTGCTCCAAAAAGACAAATGAATGGGGCAAGA...GCTGGAAGAATTACAGAAGAAACAATCCTCCACATTGATGTGCATTGTGTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS GCA 72 bp | GACCAGCAGGGCCGACGGGGCCAACGCTTCCATCACTaGCTCGGGCACCAGCTGGACCAGGAGCTCCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: DQQGRRGQRFHH*LGHQLDQELRH Trigger: GTGTCGGAGCTCCTGGTCCAGCTGGTGCCCGAGGCAGTGATGGAAGCGTTGGCCCCGTCGGCCCTGCTGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS GCA 72 bp | TCGAGAACCAGGGCTGCCTCTAAGCCCTGGAGGCCCTaGAGGGCCAGCAGATCCAGCTTCTCCGGGAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: SRTRAASKPWRP*RASRSSFSGRP Trigger: GGGTCTCCCGGAGAAGCTGGATCTGCTGGCCCTGCAGGGCCTCCAGGGCTTAGAGGCAGCCCTGGTTCTCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CAA 90 bp | GGGAGACCGGGAGCCCCAGCGACACCAGGGAGTCCAGTAGCACCCTaGGCGCCAGTGAGCCCATTTGTTCCAGGGTTGCCAGGAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRPGAPATPGSPVAP*APVSPFVPGLPGGP Trigger: TGGACCTCCTGGCAACCCTGGAACAAATGGGCTCACTGGCGCCAAGGGTGCTACTGGACTCCCTGGTGTCGCTGGGGCTCCCGGTCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS TCA 72 bp | GGGAGACCCAGAATACCGGGAGCACCAAGAAGACCCTaGGGACCTGCGGTACCAGGGGCTCCTGCGGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: GRPRIPGAPRRP*GPAVPGAPAVP Trigger: TGGTACCGCAGGAGCCCCTGGTACCGCAGGTCCTCAGGGTCTTCTTGGTGCTCCCGGTATTCTGGGTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS GCA 72 bp | AGGCCCAGAGGCACCAGCACTGCCTGGAGCACCGACTaGACCAGCTTCACCCTTGTTTCCATCAGGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RPRGTSTAWSTD*TSFTLVSIRPW Trigger: CCAGGGCCTGATGGAAACAAGGGTGAAGCTGGTGCAGTCGGTGCTCCAGGCAGTGCTGGTGCCTCTGGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS GCA 72 bp | GTCCAGGCTGACCATCACGACCTGGGGGACCATCGCTaGCAGGGTTACCATCACGACCAGCTTCACCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VQADHHDLGDHR*QGYHHDQLHQG Trigger: CCCCTGGTGAAGCTGGTCGTGATGGTAACCCTGGCAGCGATGGTCCCCCAGGTCGTGATGGTCAGCCTGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 72 bp | TGGAAGCCCACCAGGCCCAGAGGCACCAGCACTGCCTaGAGCACCGACTGCACCAGCTTCACCCTTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WKPTRPRGTSTA*STDCTSFTLVS Trigger: GGAAACAAGGGTGAAGCTGGTGCAGTCGGTGCTCCAGGCAGTGCTGGTGCCTCTGGGCCTGGTGGGCTTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CAA 72 bp | GGAGCCCCAGCGACACCAGGGAGTCCAGTAGCACCCTaGGCGCCAGTGAGCCCATTTGTTCCAGGGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAPATPGSPVAP*APVSPFVPGLP Trigger: TGGCAACCCTGGAACAAATGGGCTCACTGGCGCCAAGGGTGCTACTGGACTCCCTGGTGTCGCTGGGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CAA 72 bp | GCACTGCCTGGAGCACCGACTGCACCAGCTTCACCCTaGTTTCCATCAGGCCCTGGGGCTCCACTGGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: ALPGAPTAPASP*FPSGPGAPLGP Trigger: AGGTCCCAGTGGAGCCCCAGGGCCTGATGGAAACAAGGGTGAAGCTGGTGCAGTCGGTGCTCCAGGCAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS GCA 72 bp | CAGAATACCGGGAGCACCAAGAAGACCCTGAGGACCTaGGGTACCAGGGGCTCCTGCGGTACCAGGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QNTGSTKKTLRT*GTRGSCGTRFS Trigger: GGAGAACCTGGTACCGCAGGAGCCCCTGGTACCGCAGGTCCTCAGGGTCTTCTTGGTGCTCCCGGTATTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 72 bp | AGGGTTGCCAGGAGGTCCAACAGGGCCAGAAAGACCTaGAAGACCCACTTCACCACGGGGACCAGCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RVARRSNRARKT*KTHFTTGTSRT Trigger: GGTCCTGCTGGTCCCCGTGGTGAAGTGGGTCTTCCAGGTCTTTCTGGCCCTGTTGGACCTCCTGGCAACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 72 bp | GTTGCCAGCTTCACCTCTTGGTCCAGCTGGGCCGATTaGGCCAGGTCTGCCATCAATGCCAGGGAGACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VASFTSWSSWAD*ARSAINARETH Trigger: GTGGGTCTCCCTGGCATTGATGGCAGACCTGGCCCAATCGGCCCAGCTGGACCAAGAGGTGAAGCTGGCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 72 bp | GGGTCCAGGGAATCCGATGTTGCCAGCTTCACCTCTTaGTCCAGCTGGGCCGATTGGGCCAGGTCTGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: GSRESDVASFTS*SSWADWARSAI Trigger: GATGGCAGACCTGGCCCAATCGGCCCAGCTGGACCAAGAGGTGAAGCTGGCAACATCGGATTCCCTGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CCA 72 bp | ACGCTCTCCCTTGTGTCCAGGCTGACCATCACGACCTaGGGGACCATCGCTGCCAGGGTTACCATCACGACC | + |
|
Preference number: 6 (lower is better) Translates to: TLSLVSRLTITT*GTIAARVTITT Trigger: GGTCGTGATGGTAACCCTGGCAGCGATGGTCCCCCAGGTCGTGATGGTCAGCCTGGACACAAGGGAGAGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
||
| CDS CAA 90 bp | GGAATCCGATGTTGCCAGCTTCACCTCTTGGTCCAGCTGGGCCGATaGGGCCAGGTCTGCCATCAATGCCAGGGAGACCCACAGGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GIRCCQLHLLVQLGR*GQVCHQCQGDPQGL Trigger: AAGGCCCTGTGGGTCTCCCTGGCATTGATGGCAGACCTGGCCCAATCGGCCCAGCTGGACCAAGAGGTGAAGCTGGCAACATCGGATTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 90 bp | AGGGGGTCCAGATGCACCTGTTTCTCCAGTTCGGCCAACTGGACCTaGGTCGCCACGGGGACCACGAATCCCTTCCTTTCCAGCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: RGSRCTCFSSSANWT*VATGTTNPFLSSST Trigger: GGTGCTGCTGGAAAGGAAGGGATTCGTGGTCCCCGTGGCGACCAAGGTCCAGTTGGCCGAACTGGAGAAACAGGTGCATCTGGACCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 72 bp | GGGTCCAGATGCACCTGTTTCTCCAGTTCGGCCAACTaGACCTTGGTCGCCACGGGGACCACGAATCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSRCTCFSSSAN*TLVATGTTNPF Trigger: GAAGGGATTCGTGGTCCCCGTGGCGACCAAGGTCCAGTTGGCCGAACTGGAGAAACAGGTGCATCTGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | TGGGTCCAGGGAATCCGATGTTGCCAGCTTCACCTCTaGGTCCAGCTGGGCCGATTGGGCCAGGTCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: WVQGIRCCQLHL*VQLGRLGQVCH Trigger: ATGGCAGACCTGGCCCAATCGGCCCAGCTGGACCAAGAGGTGAAGCTGGCAACATCGGATTCCCTGGACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS GCA 72 bp | GACCTCGGATTCCAGCAGGGCCGGTTGAACCACGATTaGCAGGAGGACCCATTACACCAGCTCTGCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: DLGFQQGRLNHD*QEDPLHQLCHQ Trigger: CTGATGGCAGAGCTGGTGTAATGGGTCCTCCTGGCAATCGTGGTTCAACCGGCCCTGCTGGAATCCGAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 72 bp | GAATCCGATGTTGCCAGCTTCACCTCTTGGTCCAGCTaGGCCGATTGGGCCAGGTCTGCCATCAATGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ESDVASFTSWSS*ADWARSAINAR Trigger: CCTGGCATTGATGGCAGACCTGGCCCAATCGGCCCAGCTGGACCAAGAGGTGAAGCTGGCAACATCGGATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 72 bp | CAGAGGACCAGGTTCACCCAGAGCACCAGCAATACCTaGCAGACCACGTTCACCTCTAGAGCCAGGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: QRTRFTQSTSNT*QTTFTSRARET Trigger: GGTCTCCCTGGCTCTAGAGGTGAACGTGGTCTGCCAGGTATTGCTGGTGCTCTGGGTGAACCTGGTCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | GGACCTCGGATTCCAGCAGGGCCGGTTGAACCACGATaGCCAGGAGGACCCATTACACCAGCTCTGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: GPRIPAGPVEPR*PGGPITPALPS Trigger: TGATGGCAGAGCTGGTGTAATGGGTCCTCCTGGCAATCGTGGTTCAACCGGCCCTGCTGGAATCCGAGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | AGAACCACGAACACCAGCAGGCCCGACTGGGCCAGGTaGCCCAGATCTACCATCTTTGCCAACGGGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RTTNTSRPDWAR*PRSTIFANGSR Trigger: TCTGGACCCGTTGGCAAAGATGGTAGATCTGGGCAACCTGGCCCAGTCGGGCCTGCTGGTGTTCGTGGTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 90 bp | TGGGCTCCAACAGAGCCAGGCTCACCCTTGTTACCGGATTCTCCTTaGGAGCCAGCAGGACCAGGCTCACCAACAAGTCCTCTGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: WAPTEPGSPLLPDSP*EPAGPGSPTSPLAP Trigger: AGGTGCCAGAGGACTTGTTGGTGAGCCTGGTCCTGCTGGCTCCAAAGGAGAATCCGGTAACAAGGGTGAGCCTGGCTCTGTTGGAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 90 bp | GGGTGTCCTCTCTCACCAGGTTTGCCAGGATCACCAGAGGGGCCTTaGGGTCCAGGGAATCCGATGTTGCCAGCTTCACCTCTTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GCPLSPGLPGSPEGP*GPGNPMLPASPLGP Trigger: TGGACCAAGAGGTGAAGCTGGCAACATCGGATTCCCTGGACCCAAAGGCCCCTCTGGTGATCCTGGCAAACCTGGTGAGAGAGGACACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS TCA 72 bp | GAAGCACGGTTGGCTAGCAGGCGCATGAAGGCGAGCTaGGTTGCCATTTCCTTGGAGGACACCCCTTCTACG | + |
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Preference number: 6 (lower is better) Translates to: EARLASRRMKAS*VAISLEDTPST Trigger: CGTAGAAGGGGTGTCCTCCAAGGAAATGGCAACTCAGCTCGCCTTCATGCGCCTGCTAGCCAACCGTGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 72 bp | GATGCACCTGTTTCTCCAGTTCGGCCAACTGGACCTTaGTCGCCACGGGGACCACGAATCCCTTCCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: DAPVSPVRPTGP*SPRGPRIPSFP Trigger: TGGAAAGGAAGGGATTCGTGGTCCCCGTGGCGACCAAGGTCCAGTTGGCCGAACTGGAGAAACAGGTGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | TCTCTTTCCTTCTTCACCGCTGGGACCAGGAGGACCTaGGGCTCCAACAGAGCCAGGCTCACCCTTGTTACC | + |
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Preference number: 6 (lower is better) Translates to: SLSFFTAGTRRT*GSNRARLTLVT Trigger: GGTAACAAGGGTGAGCCTGGCTCTGTTGGAGCCCAAGGTCCTCCTGGTCCCAGCGGTGAAGAAGGAAAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | CTCTCACCAGGTTTGCCAGGATCACCAGAGGGGCCTTaGGGTCCAGGGAATCCGATGTTGCCAGCTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: LSPGLPGSPEGP*GPGNPMLPASP Trigger: AGGTGAAGCTGGCAACATCGGATTCCCTGGACCCAAAGGCCCCTCTGGTGATCCTGGCAAACCTGGTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | AGATGCACCTGTTTCTCCAGTTCGGCCAACTGGACCTaGGTCGCCACGGGGACCACGAATCCCTTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RCTCFSSSANWT*VATGTTNPFLS Trigger: GGAAAGGAAGGGATTCGTGGTCCCCGTGGCGACCAAGGTCCAGTTGGCCGAACTGGAGAAACAGGTGCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | ACAGAGCCAGGCTCACCCTTGTTACCGGATTCTCCTTaGGAGCCAGCAGGACCAGGCTCACCAACAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TEPGSPLLPDSP*EPAGPGSPTSP Trigger: AGGACTTGTTGGTGAGCCTGGTCCTGCTGGCTCCAAAGGAGAATCCGGTAACAAGGGTGAGCCTGGCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | AGACCGAATTCACCAGGAAGACCCCTTTCTCCGGGCTaGCCAACTTCTCCAGTAGTACCTGAGGGACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RPNSPGRPLSPG*PTSPVVPEGPG Trigger: CCCTGGTCCCTCAGGTACTACTGGAGAAGTTGGCAAGCCCGGAGAAAGGGGTCTTCCTGGTGAATTCGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS GCA 72 bp | GGGACCCTTTTCACCAACAAATCCAGGGGGTCCAGATaGACCTGTTTCTCCAGTTCGGCCAACTGGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: GTLFTNKSRGSR*TCFSSSANWTL Trigger: CAAGGTCCAGTTGGCCGAACTGGAGAAACAGGTGCATCTGGACCCCCTGGATTTGTTGGTGAAAAGGGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CCA 72 bp | CGGGACCCCTTTGTCCACGTGGTCCTCTGTCTCCAGTaGGGCCCTTTCGTACTGATCCCGATTGCAAATATT | + |
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Preference number: 6 (lower is better) Translates to: RDPFVHVVLCLQ*GPFVLIPIANI Trigger: AATATTTGCAATCGGGATCAGTACGAAAGGGCCCCACTGGAGACAGAGGACCACGTGGACAAAGGGGTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031668.10 ENSMUST00000141483.8 |
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| CDS CCA 72 bp | AGGACCAGATGGGCCAGCAGCTCCAACAGACCCGGTTaGACCAACAATGCCATTTTCACCCTTAGGCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: RTRWASSSNRPG*TNNAIFTLRPF Trigger: AAAGGGCCTAAGGGTGAAAATGGCATTGTTGGTCCAACCGGGTCTGTTGGAGCTGCTGGCCCATCTGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | GCACCAGGAATGCCACGAGCACCATCTCTACCAGTGTaGCCAGTGTCACCTCGGAGACCAGTTTCACCCTTT | + |
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Preference number: 6 (lower is better) Translates to: APGMPRAPSLPV*PVSPRRPVSPF Trigger: AAAGGGTGAAACTGGTCTCCGAGGTGACACTGGCAACACTGGTAGAGATGGTGCTCGTGGCATTCCTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | CCACCATTGATAGTCTCTCCTAACCAGACATGCTTGTaGGCCTGGGCGCGGCTGTATGAGTTCTTCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PPLIVSPNQTCL*AWARLYEFFAG Trigger: CCCAGCGAAGAACTCATACAGCCGCGCCCAGGCCAACAAGCATGTCTGGTTAGGAGAGACTATCAATGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS GCA 72 bp | TGGCTGCCACCATTGATAGTCTCTCCTAACCAGACATaGTTGTTGGCCTGGGCGCGGCTGTATGAGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: WLPPLIVSPNQT*LLAWARLYEFF Trigger: GAAGAACTCATACAGCCGCGCCCAGGCCAACAAGCATGTCTGGTTAGGAGAGACTATCAATGGTGGCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS GCA 72 bp | TTGCCCTCAGCAACAAGTTCAACATCGTTGGAACCCTaGAGAAGCACAGCCTTGTTCAAGCTGCCCGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LPSATSSTSLEP*RSTALFKLPVS Trigger: GGAGACGGGCAGCTTGAACAAGGCTGTGCTTCTGCAGGGTTCCAACGATGTTGAACTTGTTGCTGAGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | CAGCACCAGGAGGGCCTCTGGGTCCCATTAAACCCATaGGTCCAGGGCCAGATGAAACTCCTTTGTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: QHQEGLWVPLNP*VQGQMKLLCQN Trigger: ATTCTGACAAAGGAGTTTCATCTGGCCCTGGACCAATGGGTTTAATGGGACCCAGAGGCCCTCCTGGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031668.10 ENSMUST00000141483.8 |
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| CDS CAA 72 bp | CTGCCACCATTGATAGTCTCTCCTAACCAGACATGCTaGTTGGCCTGGGCGCGGCTGTATGAGTTCTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: LPPLIVSPNQTC*LAWARLYEFFA Trigger: AGCGAAGAACTCATACAGCCGCGCCCAGGCCAACAAGCATGTCTGGTTAGGAGAGACTATCAATGGTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | AGTTCAACATCGTTGGAACCCTGCAGAAGCACAGCCTaGTTCAAGCTGCCCGTCTCCTCATCCAGGTACGCA | + |
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Preference number: 6 (lower is better) Translates to: SSTSLEPCRSTA*FKLPVSSSRYA Trigger: TGCGTACCTGGATGAGGAGACGGGCAGCTTGAACAAGGCTGTGCTTCTGCAGGGTTCCAACGATGTTGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 90 bp | AACTGGCTGCCACCATTGATAGTCTCTCCTAACCAGACATGCTTGTaGGCCTGGGCGCGGCTGTATGAGTTCTTCGCTGGGGTGTTTACA | + |
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Preference number: 6 (lower is better) Translates to: NWLPPLIVSPNQTCL*AWARLYEFFAGVFT Trigger: TGTAAACACCCCAGCGAAGAACTCATACAGCCGCGCCCAGGCCAACAAGCATGTCTGGTTAGGAGAGACTATCAATGGTGGCAGCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 90 bp | TCAAACTGGCTGCCACCATTGATAGTCTCTCCTAACCAGACATGCTaGTTGGCCTGGGCGCGGCTGTATGAGTTCTTCGCTGGGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SNWLPPLIVSPNQTC*LAWARLYEFFAGVF Trigger: AAACACCCCAGCGAAGAACTCATACAGCCGCGCCCAGGCCAACAAGCATGTCTGGTTAGGAGAGACTATCAATGGTGGCAGCCAGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS TCA 72 bp | TTAATCCATCCATACCACTGTGTCCTTTCACGCCTTTaGAGCCAGGAAGTCCAGGAGTCCCGGGGAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: LIHPYHCVLSRL*SQEVQESRGNH Trigger: GTGGTTTCCCCGGGACTCCTGGACTTCCTGGCTTCAAAGGCGTGAAAGGACACAGTGGTATGGATGGATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | GTTGGACCAACAATGCCATTTTCACCCTTAGGCCCTTaGGTTCCCTTCTCTCCTTTAGCACCGGGTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VGPTMPFSPLGP*VPFSPLAPGWP Trigger: TGGCCAACCCGGTGCTAAAGGAGAGAAGGGAACCAAAGGGCCTAAGGGTGAAAATGGCATTGTTGGTCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 90 bp | CAGTGGGGCCCTTTCGTACTGATCCCGATTGCAAATATTGGCATGTaGCTAGGCACGAAGTTACTGCAAGCAGCAACAGAGTCCGCGTAT | + |
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Preference number: 6 (lower is better) Translates to: QWGPFVLIPIANIGM*LGTKLLQAATESAY Trigger: ATACGCGGACTCTGTTGCTGCTTGCAGTAACTTCGTGCCTAGCAACATGCCAATATTTGCAATCGGGATCAGTACGAAAGGGCCCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031668.10 ENSMUST00000141483.8 |
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| CDS CCA 72 bp | CGGCTGTATGAGTTCTTCGCTGGGGTGTTTACAGGTTaGGCCTGGATGCAGGTTTCACCAGTAGAGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: RLYEFFAGVFTG*AWMQVSPVEKS Trigger: TGATTTCTCTACTGGTGAAACCTGCATCCAGGCCCAACCTGTAAACACCCCAGCGAAGAACTCATACAGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | TTTAATCCATCCATACCACTGTGTCCTTTCACGCCTTaGAAGCCAGGAAGTCCAGGAGTCCCGGGGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: FNPSIPLCPFTP*KPGSPGVPGKP Trigger: TGGTTTCCCCGGGACTCCTGGACTTCCTGGCTTCAAAGGCGTGAAAGGACACAGTGGTATGGATGGATTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS GCA 72 bp | CTGTCTCCAGTGGGGCCCTTTCGTACTGATCCCGATTaGAAATATTGGCATGTTGCTAGGCACGAAGTTACT | + |
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Preference number: 6 (lower is better) Translates to: LSPVGPFRTDPD*KYWHVARHEVT Trigger: AGTAACTTCGTGCCTAGCAACATGCCAATATTTGCAATCGGGATCAGTACGAAAGGGCCCCACTGGAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031668.10 ENSMUST00000141483.8 |
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| CDS CCA 72 bp | TATGAGTTCTTCGCTGGGGTGTTTACAGGTTGGGCCTaGATGCAGGTTTCACCAGTAGAGAAATCACAGTAC | + |
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Preference number: 6 (lower is better) Translates to: YEFFAGVFTGWA*MQVSPVEKSQY Trigger: GTACTGTGATTTCTCTACTGGTGAAACCTGCATCCAGGCCCAACCTGTAAACACCCCAGCGAAGAACTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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| CDS CAA 72 bp | CCTTTCGTACTGATCCCGATTGCAAATATTGGCATGTaGCTAGGCACGAAGTTACTGCAAGCAGCAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: PFVLIPIANIGM*LGTKLLQAATE Trigger: CTCTGTTGCTGCTTGCAGTAACTTCGTGCCTAGCAACATGCCAATATTTGCAATCGGGATCAGTACGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031668.10 ENSMUST00000141483.8 |
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| CDS CCA 72 bp | TTTCTAGAGCCTTCAGGAGTGAGAAGGGTCTCAATCTaGTTATTGAGAGATTTCAGAGTTGCATCAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: FLEPSGVRRVSI*LLRDFRVASTS Trigger: TGAAGTTGATGCAACTCTGAAATCTCTCAATAACCAGATTGAGACCCTTCTCACTCCTGAAGGCTCTAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031668.10 |
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