Pregenerated sensors for COL1A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001506Ensembl transcript IDs: ENSMUST00000001547.8
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTaGTGTGACCCTGCCTGGCTCCAAACCCCTGAGAGGGGCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: VSPTQPAHACPMFPV*CDPAWLQTPERGRW Trigger: CCACCTGCCCCTCTCAGGGGTTTGGAGCCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR TCA 90 bp | ACACAAAGACAAGAACGAGGTAGTCTTTCAGCAACACAATTGCACTaGGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTC | + |
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Preference number: 1 (lower is better) Translates to: TQRQERGSLSATQLH*GIERSLPPSLHMHV Trigger: GACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGTGTTGCTGAAAGACTACCTCGTTCTTGTCTTTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCGAAAAGTGGGCTGGGTaGGAGGGAACCAGATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CSTFDTKLGVLPPCPHPREKWAG*EGTRLG Trigger: CCCCAATCTGGTTCCCTCCCACCCAGCCCACTTTTC...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCGCAACACAATTGCACTaGGGAATAGAACGGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRATQLH*GIERSL Trigger: GAGAGACCGTTCTATTCCTCAGTGCAATTGTGTTGC...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCAGGGTTGGGGAAAAGTaGGCTGGGTGGGAGGGAACC | + |
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Preference number: 2 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPRVGEK*AGWEGT Trigger: GGTTCCCTCCCACCCAGCCCACTTTTCCCCAACCCT...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGCCGCCCCCACACAGTTaGCCCGGTGACACACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: REQQQEGRVSEERERSDRPPPHS*PGDTQR Trigger: TCTTTGTGTGTCACCGGGGCAACTGTGTGGGGGCGG...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CCA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGAAATTTGGGGAGCAATaGAGGAGAGGCCCCAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: NGLSHPACTCMSDVSSLLKFGEQ*RRGPKR Trigger: CCTCTTGGGGCCTCTCCTCCATTGCTCCCCAAATTT...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCTTATTTCCTGTGTCTTaGGGGAGACTTAAATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRLFPVS*GRLKFG Trigger: CCCAAATTTAAGTCTCCCCCAAGACACAGGAAATAA...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTGGGTTGAGGGGCTGGTaGGACATTTCAGCATTGCCT | + |
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Preference number: 2 (lower is better) Translates to: TIALRNRTVSPTQPAHACGLRGW*DISALP Trigger: AGGCAATGCTGAAATGTCCCACCAGCCCCTCAACCC...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR CAA 90 bp | GTACAGAGTCTCTTGTTTCCTCCCAGCCCAGGGGTAAAAACTGTTTaGTGCTTTGGAAAGTGGTGCTCTGAAACCCTGATGCAGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: VQSLLFPPSPGVKTV*CFGKWCSETLMQDR Trigger: TCTGTCCTGCATCAGGGTTTCAGAGCACCACTTTCCAAAGCACAAAACAGTTTTTACCCCTGGGCTGGGAGGAAACAAGAGACTCTGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CCA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGATTGCCTTTGTTTGCTaGGCAGACAATGCATTATTT | + |
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Preference number: 2 (lower is better) Translates to: NGLSHPACTCMSDVSSLLIAFVC*ADNALF Trigger: AAATAATGCATTGTCTGCCCAGCAAACAAAGGCAAT...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGCATGGAGATGCCAGATaGTTAGGTTCCTTCAACAGT | + |
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Preference number: 2 (lower is better) Translates to: REQQQEGRVSEERERSDRHGDAR*LGSFNS Trigger: ACTGTTGAAGGAACCTAACCATCTGGCATCTCCATG...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTAGCATTGCCTTTGTTTaGTGGGCAGACAATGCATTA | + |
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Preference number: 2 (lower is better) Translates to: TIALRNRTVSPTQPAHACSIAFV*WADNAL Trigger: TAATGCATTGTCTGCCCAGCAAACAAAGGCAATGCT...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCTGCACTTTTGGTTTTTaGTCACGTTCAGTTGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPCTFGF*SRSVGQ Trigger: TTGACCAACTGAACGTGACCAAAAACCAAAAGTGCA...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTTTTGGTAAGGTTGAATaGACTTTTGGTTTTTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TIALRNRTVSPTQPAHACFGKVE*TFGFWS Trigger: TGACCAAAAACCAAAAGTGCATTCAACCTTACCAAA...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CCA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCTTGGTCACGTTCAGTTaGTCAAAGGTAAAAACTAAG | + |
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Preference number: 2 (lower is better) Translates to: YFLCLGGDLNLGSNGGEALVTFS*SKVKTK Trigger: CTTAGTTTTTACCTTTGACCAACTGAACGTGACCAA...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCCGTCTGTTTCCAGGGTaGGGGAAAAGTGGGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRRLFPG*GKSGLG Trigger: ACCCAGCCCACTTTTCCCCAACCCTGGAAACAGACG...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR GCA 72 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTaGTGTGACCCTGCCTGGCTCCAAACCCCTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TQPAHACPMFPV*CDPAWLQTPER Trigger: CCTCTCAGGGGTTTGGAGCCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGATGTCCCAGCAGGATTaGAGGGTGCTGGGTAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: TQPAHACPMFPVCCDPAWMSQQD*RVLGRE Trigger: TTCCCTACCCAGCACCCTCAAATCCTGCTGGGACAT...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCCAGCATTGCCTTTGTTaGCTGGGCAGACAATGCATT | + |
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Preference number: 3 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRQHCLC*LGRQCI Trigger: AATGCATTGTCTGCCCAGCAAACAAAGGCAATGCTG...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGGGGGGAGACTTAAATTaGGGGAGCAATGGAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NGLSHPACTCMSDVSSLLGGDLN*GSNGGE Trigger: CTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCC...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCATTTCAGCATTGCCTTaGTTTGCTGGGCAGACAATG | + |
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Preference number: 3 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRISALP*FAGQTM Trigger: CATTGTCTGCCCAGCAAACAAAGGCAATGCTGAAAT...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGTGGGACATTTCAGCATaGCCTTTGTTTGCTGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: TQPAHACPMFPVCCDPAWWDISA*PLFAGQ Trigger: CTGCCCAGCAAACAAAGGCAATGCTGAAATGTCCCA...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCTGGGGGAAATTGAGTTaGGGTTGTTCGTCTGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: LGREVDGVEGLVGHFSIAWGKLS*GCSSVS Trigger: GGAAACAGACGAACAACCCAAACTCAATTTCCCCCA...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR TCA 72 bp | CAAGAACGAGGTAGTCTTTCAGCAACACAATTGCACTaGGGAATAGAACGGTCTCTCCCACCCAGCCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: QERGSLSATQLH*GIERSLPPSLH Trigger: GTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGTGTTGCTGAAAGACTACCTCGTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR GCA 72 bp | GAGGGGCTGGTGGGACATTTCAGCATTGCCTTTGTTTaGTGGGCAGACAATGCATTATTTCCTGTGTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: EGLVGHFSIAFV*WADNALFPVSW Trigger: CCAAGACACAGGAAATAATGCATTGTCTGCCCAGCAAACAAAGGCAATGCTGAAATGTCCCACCAGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCAGGTTGAATGCACTTTaGGTTTTTGGTCACGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPRLNAL*VFGHVQ Trigger: CTGAACGTGACCAAAAACCAAAAGTGCATTCAACCT...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGCCATATTTTTGGCTTTaGGGGGAAATTGAGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: REQQQEGRVSEERERSDRPYFWL*GEIEFG Trigger: CCCAAACTCAATTTCCCCCAAAAGCCAAAAATATGG...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTATGCACTTTTGGTTTTaGGTCACGTTCAGTTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: TIALRNRTVSPTQPAHACMHFWF*VTFSWS Trigger: TGACCAACTGAACGTGACCAAAAACCAAAAGTGCAT...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCGCCAACGGGTCCCCTTaGGCCTTGGGGGCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRANGSP*ALGARV Trigger: GACCCTGGCCCCCAAGGCCCAAGGGGACCCGTTGGC...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCGGGCCAGGGGCTCCCTaGGCTCCAGCTTCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRGPGAP*APASPS Trigger: AGATGGAGAAGCTGGAGCTCAGGGAGCCCCTGGCCC...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCTCACCAGGCATTCCCTaGAGACCGGGGGCACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRSPGIP*RPGAPW Trigger: CCAGGGTGCCCCCGGTCTTCAGGGAATGCCTGGTGA...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGGACCTGGAGGGCCGCTaGGGCCCTGGGGTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: NGLSHPACTCMSDVSSLLDLEGR*GPGVQR Trigger: CCTCTGGACCCCAGGGCCCCAGCGGCCCTCCAGGTC...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCTCACCACGGGGGCCTTaGGGTCCAGCAGGGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIASPRGP*GPAGPR Trigger: CCGTGGCCCTGCTGGACCCCAAGGCCCCCGTGGTGA...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCGGCCAGGGAGACCGTTaGGTCCGTCTTTGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRGQGDR*VRLCQE Trigger: CTCCTGGCAAAGACGGACTCAACGGTCTCCCTGGCC...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGCGCGAGCACCAGCAGTaGCAGGAGGTCCAGGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: TQPAHACPMFPVCCDPAWREHQQ*QEVQGD Trigger: GTCGCCCTGGACCTCCTGGCACTGCTGGTGCTCGCG...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCGGCCGCTGTCACCAGTaGGACCTCGAGGACCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIAGRCHQ*DLEDQG Trigger: CCCCTGGTCCTCGAGGTCGCACTGGTGACAGCGGCC...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCGGTCCCCTTGGGCCTTaGGGGCCAGGGTCTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIAGPLGP*GPGSPL Trigger: CAAGGGAGACCCTGGCCCCCAAGGCCCAAGGGGACC...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCCACCACTGTTACCCTTaGGACCTGGAGGGCCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRHHCYP*DLEGRW Trigger: CCAGCGGCCCTCCAGGTCCCAAGGGTAACAGTGGTG...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCGCCTTGGAAACCTTGTaGACCAGGTGCACCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRALETL*TRCTRG Trigger: CCCCCTGGTGCACCTGGTCCACAAGGTTTCCAAGGC...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCCCCATCACACCAGCCTaGCCACGGGCTCCAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIAPITPA*PRAPGG Trigger: TCCTCCTGGAGCCCGTGGCCAGGCTGGTGTGATGGG...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGAATCCACGAGCACCCTaGGGTCCAGGAGGTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: TQPAHACPMFPVCCDPAWNPRAP*GPGGPR Trigger: GCGTGGACCTCCTGGACCTCAGGGTGCTCGTGGATT...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCTGCCAGGACTGCCAGTaGGACCCTTGGCACCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIACQDCQ*DPWHQG Trigger: TCCCTGGTGCCAAGGGTCTCACTGGCAGTCCTGGCA...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCACCCTTAGCACCAACTaGACCAGGGAAGCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRTLSTN*TREARR Trigger: CCTCCTGGCTTCCCTGGTGCAGTTGGTGCTAAGGGT...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCTCACCACGCACACCCTaGGGACCTTCAGAGCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRSPRTP*GPSEPL Trigger: TAGAGGCTCTGAAGGTCCCCAGGGTGTGCGTGGTGA...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCGGACCAGGAAGACCCTaGAATCCAGGGGAGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIAGPGRP*NPGEPA Trigger: CGCTGGCTCCCCTGGATTCCAGGGTCTTCCTGGTCC...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTAGACCGGGGGCACCCTaGCTACCGGGAGCTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACRPGAP*LPGAPG Trigger: CCCCGGAGCTCCCGGTAGCCAGGGTGCCCCCGGTCT...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCTGCGGGCAGGGTTCTTaGGGCTGCCTTCGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPCGQGS*GCLRGC Trigger: GCAGCCCCGAAGGCAGCCGCAAGAACCCTGCCCGCA...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCGACCGGGAGGACCACTaGGACCAGCTTCACCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIADREDH*DQLHPC Trigger: ACAAGGGTGAAGCTGGTCCCAGTGGTCCTCCCGGTC...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGCGCAGGAAGGTCAGCTaGATAGCGACATCGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGLSHPACTCMSDVSSLLRRKVS*IATSAG Trigger: CCCCGCCGATGTCGCTATCCAGCTGACCTTCCTGCG...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCCCAGAGAAGCCACGATaGCCCTTTATGCCTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRPEKPR*PFMPLS Trigger: TGACAGAGGCATAAAGGGTCATCGTGGCTTCTCTGG...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGGGGGCCTGCAGGACCTaGAGCTCCAGAGGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: REQQQEGRVSEERERSDRGACRT*SSRGAL Trigger: CAAGGCCCCTCTGGAGCTTCAGGTCCTGCAGGCCCC...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGATGTCTTCTTGGCCATaGGTCAGGAGGGCAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQPAHACPMFPVCCDPAWMSSWP*VRRAVA Trigger: GGCCACTGCCCTCCTGACGCATGGCCAAGAAGACAT...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCCAGTGTCTCCTTTGTTaGCAGGAGCACCAGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRQCLLC*QEHQVH Trigger: GTGAACCTGGTGCTCCTGGCAACAAAGGAGACACTG...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CCA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTCGCCCTCCCGTCTTTaGGGGTTGGGACAGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NGLSHPACTCMSDVSSLLSPSRL*GLGQSS Trigger: ACTGGACTGTCCCAACCCCCAAAGACGGGAGGGCGA...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTGTTACCCTTGGGACCTaGAGGGCCGCTGGGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACVTLGT*RAAGAL Trigger: CAGGGCCCCAGCGGCCCTCCAGGTCCCAAGGGTAAC...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCCCTTGGGGTTCGGGCTaGTGTACCAGTTCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIAPWGSG*CTSSSE Trigger: CTCAGAAGAACTGGTACATCAGCCCGAACCCCAAGG...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCAGGGAGCCACATCGATaGTGGGCAGGCGGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPREPHR*WAGGRS Trigger: AGACCTCCCGCCTGCCCATCATCGATGTGGCTCCCT...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR GCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTACCTCTCTCGCCTCTTaGGCCAGAGGGTCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACTSLAS*ARGSRG Trigger: GCCCCTGGACCCTCTGGCGCAAGAGGCGAGAGAGGT...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCGCGTCAGGAGGGCAGTaGCCCCTAAGAGGAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPASGGQ*PLRGAG Trigger: TCCTGCTCCTCTTAGGGGCCACTGCCCTCCTGACGC...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGGAGCCTCTAGCTCCTTaGGGACCAGCTTCACCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TQPAHACPMFPVCCDPAWEPLAP*GPASPL Trigger: TAAGGGTGAAGCTGGTCCCCAAGGAGCTAGAGGCTC...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCTCCGAATTCCTGGTCTaGGGCACCAATGTCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIASEFLV*GTNVQG Trigger: CCCTTGGACATTGGTGCCCCAGACCAGGAATTCGGA...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTCAGAGTGGCACATCTTaGGGTCGCGGCATGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACQSGTS*GRGMCG Trigger: CCCGCACATGCCGCGACCTCAAGATGTGCCACTCTG...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGCAGCTTCTCCATCTTTaGCAGCAGGACCAACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NGLSHPACTCMSDVSSLLQLLHL*QQDQQR Trigger: GCGCTGTTGGTCCTGCTGGCAAAGATGGAGAAGCTG...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCTCTCCAAACCAGACGTaGTTCTTTTCCTTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRSPNQT*FFSLGF Trigger: GAACCCCAAGGAAAAGAAGCACGTCTGGTTTGGAGA...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCCACCGGAAGGACCCTTaGGGCCAGCAACACCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPHRKDP*GQQHHQ Trigger: CTGATGGTGTTGCTGGCCCCAAGGGTCCTTCCGGTG...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGGGGACCAGCAGGACCTaGGGGACCTTGTACACCACG | + |
|
Preference number: 4 (lower is better) Translates to: REQQQEGRVSEERERSDRGTSRT*GTLYTT Trigger: CGTGGTGTACAAGGTCCCCCAGGTCCTGCTGGTCCC...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGCTCTTCCAGTCAGAGTaGCACATCTTGAGGTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NGLSHPACTCMSDVSSLLLFQSE*HILRSR Trigger: CCGCGACCTCAAGATGTGCCACTCTGACTGGAAGAG...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCTCTGGGAGGCCTCGGTaGACATTAGGCGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPSGRPR*TLGAGR Trigger: CCTTCCTGCGCCTAATGTCCACCGAGGCCTCCCAGA...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCACCGCGTTCACCACTTaGTCCAGAAGGACCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGREVDGVEGLVGHFSIATAFTT*SRRTLF Trigger: AAACAAGGTCCTTCTGGATCAAGTGGTGAACGCGGT...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCCCTTGGCACCATCGTTaGCGGGGGCACCATTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPPWHHR*RGHHCF Trigger: GAAACAATGGTGCCCCCGGCAACGATGGTGCCAAGG...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTCACCACGGGGACCTTTaGCCCCTTCTTTGCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACHHGDL*PLLCQR Trigger: CCGTTGGCAAAGAAGGGGGCAAAGGTCCCCGTGGTG...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTCCACGTCTCACCATTaGGGACCCTTAGGCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGLSHPACTCMSDVSSLLSTSHH*GPLGHC Trigger: ACAATGGCCTAAGGGTCCCCAATGGTGAGACGTGGA...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGGACCAGAAGGACCCATaGGGCCAGGCACGGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: REQQQEGRVSEERERSDRDQKDP*GQARKL Trigger: GAGTTTCCGTGCCTGGCCCCATGGGTCCTTCTGGTC...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCTCGGGGACCCATCTaGCCAGGAGCTCCGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACPRGPI*PGAPFS Trigger: TGAAAACGGAGCTCCTGGCCAGATGGGTCCCCGAGG...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTAGTCATAACCGCCACTaGGAGGTCCAGGAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACSHNRH*EVQEGQ Trigger: CTGGCCCTCCTGGACCTCCCAGTGGCGGTTATGACT...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTGCTGACTCAGGCTCTTaGGGGTGGTGTCCACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACADSGS*GWCPPQ Trigger: TTGAGGTGGACACCACCCTCAAGAGCCTGAGTCAGC...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR TCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCTGTTGCAGTAGACCTTaGTGGCGTCCAGGTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPCCSRP*WRPGCS Trigger: GCTGCAACCTGGACGCCATCAAGGTCTACTGCAACA...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGCCTGTTCACCAGGCTTaGCTGCTTCACCAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: REQQQEGRVSEERERSDRPVHQA*LLHQED Trigger: GTCCTCCTGGTGAAGCAGGCAAGCCTGGTGAACAGG...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCCAGAAGGACCTTGTTTaGCAGGTTCACCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPQKDLV*QVHQRG Trigger: GCCCCTCTGGTGAACCTGGCAAACAAGGTCCTTCTG...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCACCAGTATCACCCTTaGCACCATCGTTGCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YFLCLGGDLNLGSNGGEAHQYHP*HHRCRG Trigger: CCCCCGGCAACGATGGTGCCAAGGGTGATACTGGTG...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGGTCACCCTTAGGACCTaGAAGACCAGCTGCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: REQQQEGRVSEERERSDRVTLRT*KTSCTT Trigger: CGTGGTGCAGCTGGTCTTCCAGGTCCTAAGGGTGAC...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTCACCACGAGGACCTTTaGGTCCAGGAGCACCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACHHEDL*VQEHQR Trigger: ACGTTGGTGCTCCTGGACCCAAAGGTCCTCGTGGTG...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR GCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCGGAATCCATCGGTCATaGTCTCTCCAAACCAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPGIHRS*SLQTRR Trigger: ACGTCTGGTTTGGAGAGAGCATGACCGATGGATTCC...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGCACCGGGTTCTCCTTTaGCACCAGTGTCTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: REQQQEGRVSEERERSDRHRVLL*HQCLLC Trigger: ACAAAGGAGACACTGGTGCCAAAGGAGAACCCGGTG...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTTCCAGGTTGCAGCCTTaGTTAGGGTCGATCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACSRLQP*LGSIQY Trigger: GTACTGGATCGACCCTAACCAAGGCTGCAACCTGGA...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTTCTAGTCCGAATTCCTaGTCTGGGGCACCAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIALRNRTVSPTQPAHACSSPNS*SGAPMS Trigger: GGACATTGGTGCCCCAGACCAGGAATTCGGACTAGA...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCCATTGTGTATGCAGCTaGCTTCAGGGATGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPHCVCS*LQGCLL Trigger: AAGAAGACATCCCTGAAGTCAGCTGCATACACAATG...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCACGATGACCCTTTATaGCTCTGTCACCTTGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YFLCLGGDLNLGSNGGEAHDDPL*LCHLVR Trigger: GCGAACAAGGTGACAGAGGCATAAAGGGTCATCGTG...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| 3UTR CAA 72 bp | CTCTTGTTTCCTCCCAGCCCAGGGGTAAAAACTGTTTaGTGCTTTGGAAAGTGGTGCTCTGAAACCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLFPPSPGVKTV*CFGKWCSETLM Trigger: CATCAGGGTTTCAGAGCACCACTTTCCAAAGCACAAAACAGTTTTTACCCCTGGGCTGGGAGGAAACAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR TCA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCTGGTTTTGTATTCGATaGCTGTCTTGCCCCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFLCLGGDLNLGSNGGEAWFCIR*LSCPKF Trigger: GAACTTGGGGCAAGACAGTCATCGAATACAAAACCA...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS CCA 90 bp | GGGGACCAGCCTCACCACGGTCTCCGGGAGCACCACGGGCTCCGGTaGGACCGGGAGGACCACTGGGACCAGCTTCACCCTTGTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDQPHHGLREHHGLR*DREDHWDQLHPCHQ Trigger: CTGGTGACAAGGGTGAAGCTGGTCCCAGTGGTCCTCCCGGTCCCACCGGAGCCCGTGGTGCTCCCGGAGACCGTGGTGAGGCTGGTCCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS CCA 90 bp | TCTCCAGCGGTACCCTTAGGTCCAGGGAATCCCATCACACCAGCCTaGCCACGGGCTCCAGGAGGACCTGCGGGTCCAGGGCGACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAVPLGPGNPITPA*PRAPGGPAGPGRPS Trigger: AGATGGTCGCCCTGGACCCGCAGGTCCTCCTGGAGCCCGTGGCCAGGCTGGTGTGATGGGATTCCCTGGACCTAAGGGTACCGCTGGAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGGGCCAACGGGTCCCCTaGGGCCTTGGGGGCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NGLSHPACTCMSDVSSLLGQRVP*GLGGQG Trigger: ACCCTGGCCCCCAAGGCCCAAGGGGACCCGTTGGCC...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCGGGGCCTTGGAAACCTaGTGGACCAGGTGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRGALET*WTRCTR Trigger: CCTGGTGCACCTGGTCCACAAGGTTTCCAAGGCCCC...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGTCCAGGGCGACCATCTaGACCAGCGGGACCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TQPAHACPMFPVCCDPAWSRATI*TSGTRG Trigger: CCCCCTGGTCCCGCTGGTCAAGATGGTCGCCCTGGA...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCGGACCAGCTTCACCCTaGTCACCAGGGGCACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRGPASP*SPGAPA Trigger: TGCTGGTGCCCCTGGTGACAAGGGTGAAGCTGGTCC...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS CCA 90 bp | AGGCTCACCACGGGCTCCTCGTTTTCCTTCTTCTCCGGCAGGGCCTaGGGGACCTTGAACTCCAGTAGCACCGGGTTCTCCTTTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RLTTGSSFSFFSGRA*GTLNSSSTGFSFGT Trigger: GGTGCCAAAGGAGAACCCGGTGCTACTGGAGTTCAAGGTCCCCCAGGCCCTGCCGGAGAAGAAGGAAAACGAGGAGCCCGTGGTGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGGGGCCAGGGTCTCCCTaGGGTCCCTCGACTCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: TQPAHACPMFPVCCDPAWGPGSP*GPSTPT Trigger: TGTAGGAGTCGAGGGACCCAAGGGAGACCCTGGCCC...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGGACCTCGGGGACCCATaGGACCTGAACCGCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TQPAHACPMFPVCCDPAWDLGDP*DLNRQA Trigger: AGCCTGGCGGTTCAGGTCCAATGGGTCCCCGAGGTC...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCTCGCCTGTCTCACCCTaGTCACCACGGGGGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGREVDGVEGLVGHFSIASPVSP*SPRGPW Trigger: CCAAGGCCCCCGTGGTGACAAGGGTGAGACAGGCGA...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCAGCTCCAGAGGGGCCTaGTTCACCAGGAGAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRSSRGA*FTRRTR Trigger: CCTGGTTCTCCTGGTGAACAAGGCCCCTCTGGAGCT...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGCCAGGACGGCCGGGCTaGCCAGCTTCCCCATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: NGLSHPACTCMSDVSSLLPGRPG*PASPSS Trigger: AGATGATGGGGAAGCTGGCAAGCCCGGCCGTCCTGG...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCGCACCGGGTTCTCCTTaGGCACCAGTGTCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRAPGSP*APVSPL Trigger: CAAAGGAGACACTGGTGCCAAAGGAGAACCCGGTGC...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGAGGGCCTGGGGGACCTaGAACTCCAGTAGCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: NGLSHPACTCMSDVSSLLRAWGT*NSSSTG Trigger: CCCGGTGCTACTGGAGTTCAAGGTCCCCCAGGCCCT...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGGGAGCCAGCGGGACCTaGTTCACCTCTCTCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQPAHACPMFPVCCDPAWGASGT*FTSLTS Trigger: GCTGGTGAGAGAGGTGAACAAGGTCCCGCTGGCTCC...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGTTGCCGGGGGCACCATaGTTTCCTCGGGGACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TQPAHACPMFPVCCDPAWLPGAP*FPRGPA Trigger: TGCTGGTCCCCGAGGAAACAATGGTGCCCCCGGCAA...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACCTTTGATACCAAACTGGGCGTGCTGCCACCCTGCCCCCATCCCCGCCCAGAAGGACCTTGTTaGCCAGGTTCACCAGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSTFDTKLGVLPPCPHPRPEGPC*PGSPEG Trigger: CCCCTCTGGTGAACCTGGCAAACAAGGTCCTTCTGG...GCGGGGATGGGGGCAGGGTGGCAGCACGCCCAGTTTGGTATCAAAGGTGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS GCA 90 bp | AGGCCATTGTGTATGCAGCTGACTTCAGGGATGTCTTCTTGGCCATaGGTCAGGAGGGCAGTGGCCCCTAAGAGGAGCAGGAGCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPLCMQLTSGMSSWP*VRRAVAPKRSRSRR Trigger: CCTCCGGCTCCTGCTCCTCTTAGGGGCCACTGCCCTCCTGACGCATGGCCAAGAAGACATCCCTGAAGTCAGCTGCATACACAATGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGACCTTTCGCACCAGGTaGGCCATCAGCACCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NGLSHPACTCMSDVSSLLTFRTR*AISTRG Trigger: CCCCCTGGTGCTGATGGCCAACCTGGTGCGAAAGGT...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CAA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGTCAGAGTGGCACATCTaGAGGTCGCGGCATGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TQPAHACPMFPVCCDPAWSEWHI*RSRHVR Trigger: CCGCACATGCCGCGACCTCAAGATGTGCCACTCTGA...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTCACCACGGGGACCTTaGCCCCCTTCTTTGCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: NGLSHPACTCMSDVSSLLSPRGP*PPSLPT Trigger: CGTTGGCAAAGAAGGGGGCAAAGGTCCCCGTGGTGA...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CCA 90 bp | ACCCTTAGGCCATTGTGTATGCAGCTGACTTCAGGGATGTCTTCTTaGCCATGCGTCAGGAGGGCAGTGGCCCCTAAGAGGAGCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLRPLCMQLTSGMSS*PCVRRAVAPKRSRS Trigger: GCTCCTGCTCCTCTTAGGGGCCACTGCCCTCCTGACGCATGGCCAAGAAGACATCCCTGAAGTCAGCTGCATACACAATGGCCTAAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGAGAGCCTCTAGCTCCTaGGGGACCAGCTTCACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NGLSHPACTCMSDVSSLLRASSS*GTSFTL Trigger: AAGGGTGAAGCTGGTCCCCAAGGAGCTAGAGGCTCT...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCATACCAGGAGCACCATaGGCACCTTTAGCGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGREVDGVEGLVGHFSIAIPGAP*APLAPG Trigger: ACCTGGCGCTAAAGGTGCCAATGGTGCTCCTGGTAT...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCCCAGTGTCTCCTTTGTaGCCAGGAGCACCAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGREVDGVEGLVGHFSIAPVSPL*PGAPGS Trigger: TGAACCTGGTGCTCCTGGCAACAAAGGAGACACTGG...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCGCACCACGAGGACCTTaGGGTCCAGGAGCACCAACG | + |
|
Preference number: 5 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPAPRGP*GPGAPT Trigger: CGTTGGTGCTCCTGGACCCAAAGGTCCTCGTGGTGC...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CAA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCGTAGCGGCCACCATCTaGAGACTTCTCTTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGREVDGVEGLVGHFSIAVAATI*RLLLRW Trigger: CCACCTCAAGAGAAGTCTCAAGATGGTGGCCGCTAC...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGTAGGGAAGTAGACGGGGTTGAGGGGCTGGTGGGACATTTCAGCATTGCCGGCAGGCGGGAGGTCTaGGTGGTTTTGTATTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGREVDGVEGLVGHFSIAGRREV*VVLYSM Trigger: CATCGAATACAAAACCACCAAGACCTCCCGCCTGCC...GGCAATGCTGAAATGTCCCACCAGCCCCTCAACCCCGTCTACTTCCCTACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGGCACCAGTATCACCCTaGGCACCATCGTTGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: REQQQEGRVSEERERSDRAPVSP*APSLPG Trigger: CCCCGGCAACGATGGTGCCAAGGGTGATACTGGTGC...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS GCA 90 bp | CCCTCCCGTCTTTGGGGGTTGGGACAGTCCAGTTCTTCATTGCATTaGACGTCATCGCACACAGCCGTGCCATTGTGGCAGATACAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PSRLWGLGQSSSSLH*TSSHTAVPLWQIQI Trigger: GATCTGTATCTGCCACAATGGCACGGCTGTGTGCGATGACGTGCAATGCAATGAAGAACTGGACTGTCCCAACCCCCAAAGACGGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CCA 90 bp | ACGTATTCTTCCGGGCAGAAAGCACAGCACTCGCCCTCCCGTCTTTaGGGGTTGGGACAGTCCAGTTCTTCATTGCATTGCACGTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: TYSSGQKAQHSPSRL*GLGQSSSSLHCTSS Trigger: CGATGACGTGCAATGCAATGAAGAACTGGACTGTCCCAACCCCCAAAGACGGGAGGGCGAGTGCTGTGCTTTCTGCCCGGAAGAATACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGGGGACCCTTAGGCCATaGTGTATGCAGCTGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NGLSHPACTCMSDVSSLLGTLRP*CMQLTS Trigger: TGAAGTCAGCTGCATACACAATGGCCTAAGGGTCCC...CAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGTGGGAGAGACCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCTGCACATGCATGTCCGATGTTTCCAGTCTGCTGTGACCCTGCCTGGCAGTCCAGTTCTTCATaGCATTGCACGTCATCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQPAHACPMFPVCCDPAWQSSSS*HCTSSH Trigger: GTGCGATGACGTGCAATGCAATGAAGAACTGGACTG...CCAGGCAGGGTCACAGCAGACTGGAAACATCGGACATGCATGTGCAGGCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCGGGCCAGGGAGACCGTaGAGTCCGTCTTTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YFLCLGGDLNLGSNGGEAGPGRP*SPSLPG Trigger: TCCTGGCAAAGACGGACTCAACGGTCTCCCTGGCCC...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGCTGAGCTCGATCTCGTaGGATCCCTGGAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: REQQQEGRVSEERERSDRLSSIS*DPWRSR Trigger: CCTGCTCCTCCAGGGATCCAACGAGATCGAGCTCAG...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCGGACCAGCATCTCCTTaGGCACCATCCAAACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPGPASP*APSKPL Trigger: CAGTGGTTTGGATGGTGCCAAAGGAGATGCTGGTCC...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGGCACCAGTGTCTCCTTaGTTGCCAGGAGCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: REQQQEGRVSEERERSDRAPVSP*LPGAPG Trigger: ACCTGGTGCTCCTGGCAACAAAGGAGACACTGGTGC...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTCCAGCTTCTCCATCTTaGCCAGCAGGACCAACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TIALRNRTVSPTQPAHACPASPS*PAGPTA Trigger: CGCTGTTGGTCCTGCTGGCAAAGATGGAGAAGCTGG...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCCTGTTCACCAGGCTaGCCTGCTTCACCAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YFLCLGGDLNLGSNGGEAPCSPG*PASPGG Trigger: TCCTCCTGGTGAAGCAGGCAAGCCTGGTGAACAGGG...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCCGAACCATCAGCACCTTaGGGACCAGCATCACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPVSWGRLKFGEQWRRGPEPSAP*GPASPL Trigger: CAGAGGTGATGCTGGTCCCAAAGGTGCTGATGGTTC...GGGGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGACCGACCACACCACGTaGTCCAGCAATACCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: REQQQEGRVSEERERSDRTDHTT*SSNTLR Trigger: CCTCAGGGTATTGCTGGACAACGTGGTGTGGTCGGT...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGCCGTTGAGTCCGTCTTaGCCAGGAGAACCAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: REQQQEGRVSEERERSDRPLSPS*PGEPAE Trigger: CTCTGCTGGTTCTCCTGGCAAAGACGGACTCAACGG...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS TCA 90 bp | ACGAGGACCAGAAGGACCCATGGGGCCAGGCACGGAAACTCCAGCTaGTTTTTCATCATAGCCATAGGACATCTGGGAAGCAAAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TRTRRTHGARHGNSS*FFIIAIGHLGSKVS Trigger: GGAAACTTTGCTTCCCAGATGTCCTATGGCTATGATGAAAAATCAGCTGGAGTTTCCGTGCCTGGCCCCATGGGTCCTTCTGGTCCTCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS GCA 90 bp | GACAGTCCAGTTCTTCATTGCATTGCACGTCATCGCACACAGCCGTaGCATTGTGGCAGATACAGATCAAGCATACCTCGGGTTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: DSPVLHCIARHRTQP*HCGRYRSSIPRVST Trigger: CGTGGAAACCCGAGGTATGCTTGATCTGTATCTGCCACAATGGCACGGCTGTGTGCGATGACGTGCAATGCAATGAAGAACTGGACTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCACCTTTAGCGCCAGGTaGTCCATCAGCACCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YFLCLGGDLNLGSNGGEATFSAR*SISTRV Trigger: AACCCTGGTGCTGATGGACAACCTGGCGCTAAAGGT...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTGACCGCGTTCACCACTaGATCCAGAAGGACCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TIALRNRTVSPTQPAHACDRVHH*IQKDLV Trigger: AACAAGGTCCTTCTGGATCAAGTGGTGAACGCGGTC...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGTATGCCTCTGTCACCTaGTTCGCCTGTCTCACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: REQQQEGRVSEERERSDRYASVT*FACLTL Trigger: AAGGGTGAGACAGGCGAACAAGGTGACAGAGGCATA...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
||
| CDS-3UTR CAA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCGTCCAGGTTGCAGCCTaGGTTAGGGTCGATCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: YFLCLGGDLNLGSNGGEAVQVAA*VRVDPV Trigger: TACTGGATCGACCCTAACCAAGGCTGCAACCTGGAC...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CCA 90 bp | AGTTCTTCATTGCATTGCACGTCATCGCACACAGCCGTGCCATTGTaGCAGATACAGATCAAGCATACCTCGGGTTTCCACGTCTCACCA | + |
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Preference number: 5 (lower is better) Translates to: SSSLHCTSSHTAVPL*QIQIKHTSGFHVSP Trigger: TGGTGAGACGTGGAAACCCGAGGTATGCTTGATCTGTATCTGCCACAATGGCACGGCTGTGTGCGATGACGTGCAATGCAATGAAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CAA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCACACAGCCGTGCCATaGTGGCAGATACAGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: YFLCLGGDLNLGSNGGEAHTAVP*WQIQIK Trigger: CTTGATCTGTATCTGCCACAATGGCACGGCTGTGTG...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CAA 90 bp | AGGGAGCAGCAGCAAGAGGGGAGGGTTTCAGAAGAAAGAGAGAGATCAGATAGGATCTTGAGACTTCTCTaGAGGTGGCTGAGGCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: REQQQEGRVSEERERSDRILRLL*RWLRQE Trigger: TTCCTGCCTCAGCCACCTCAAGAGAAGTCTCAAGAT...CCTATCTGATCTCTCTCTTTCTTCTGAAACCCTCCCCTCTTGCTGCTGCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CAA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCAGTTCTTCATTGCATaGCACGTCATCGCACACAGC | + |
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Preference number: 5 (lower is better) Translates to: YFLCLGGDLNLGSNGGEAQFFIA*HVIAHS Trigger: GCTGTGTGCGATGACGTGCAATGCAATGAAGAACTG...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CAA 90 bp | ACAATTGCACTGAGGAATAGAACGGTCTCTCCCACCCAGCCTGCACATGCATGTGAGGTCTTGGTGGTTTaGTATTCGATGACTGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: TIALRNRTVSPTQPAHACEVLVV*YSMTVL Trigger: CAAGACAGTCATCGAATACAAAACCACCAAGACCTC...ACATGCATGTGCAGGCTGGGTGGGAGAGACCGTTCTATTCCTCAGTGCAATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS-3UTR CAA 90 bp | TATTTCCTGTGTCTTGGGGGAGACTTAAATTTGGGGAGCAATGGAGGAGAGGCCCTACATCTTCTGAGTTaGGTGATACGTATTCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: YFLCLGGDLNLGSNGGEALHLLS*VIRILP Trigger: CGGAAGAATACGTATCACCAAACTCAGAAGATGTAG...GGCCTCTCCTCCATTGCTCCCCAAATTTAAGTCTCCCCCAAGACACAGGAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CCA 72 bp | CCTCACCACGGTCTCCGGGAGCACCACGGGCTCCGGTaGGACCGGGAGGACCACTGGGACCAGCTTCACCCT | + |
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Preference number: 6 (lower is better) Translates to: PHHGLREHHGLR*DREDHWDQLHP Trigger: AGGGTGAAGCTGGTCCCAGTGGTCCTCCCGGTCCCACCGGAGCCCGTGGTGCTCCCGGAGACCGTGGTGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS GCA 72 bp | GACCAGCAGGACCAGTCTCACCACGATCGCCATTCTTaGCAGCGGGACCAACAGGGCCGGGAGCACCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: DQQDQSHHDRHS*QRDQQGREHRE Trigger: CTCCCGGTGCTCCCGGCCCTGTTGGTCCCGCTGGCAAGAATGGCGATCGTGGTGAGACTGGTCCTGCTGGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | GGACCAGCAGGACCAGTCTCACCACGATCGCCATTCTaGCCAGCGGGACCAACAGGGCCGGGAGCACCGGGA | + |
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Preference number: 6 (lower is better) Translates to: GPAGPVSPRSPF*PAGPTGPGAPG Trigger: TCCCGGTGCTCCCGGCCCTGTTGGTCCCGCTGGCAAGAATGGCGATCGTGGTGAGACTGGTCCTGCTGGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CCA 72 bp | GAGGCCTCGGTGGACATTAGGCGCAGGAAGGTCAGCTaGATAGCGACATCGGCGGGGTCGGAGCCCTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: EASVDIRRRKVS*IATSAGSEPSL Trigger: AAGCGAGGGCTCCGACCCCGCCGATGTCGCTATCCAGCTGACCTTCCTGCGCCTAATGTCCACCGAGGCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CCA 72 bp | ACGGGCTCCTCGTTTTCCTTCTTCTCCGGCAGGGCCTaGGGGACCTTGAACTCCAGTAGCACCGGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TGSSFSFFSGRA*GTLNSSSTGFS Trigger: GGAGAACCCGGTGCTACTGGAGTTCAAGGTCCCCCAGGCCCTGCCGGAGAAGAAGGAAAACGAGGAGCCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 90 bp | AGCACCAGCAATACCAGGAGCACCATTGGCACCTTTAGCGCCAGGTaGTCCATCAGCACCAGGGTTTCCAGCAGGGCCGGCAGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: STSNTRSTIGTFSAR*SISTRVSSRAGSTS Trigger: GCTGGTGCTGCCGGCCCTGCTGGAAACCCTGGTGCTGATGGACAACCTGGCGCTAAAGGTGCCAATGGTGCTCCTGGTATTGCTGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS TCA 72 bp | GGGCCAGGAAGACCAGGGAAGCCTCTTTCTCCTCTCTaGCCGGGAAGACCGACCACACCACGTTGTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GPGRPGKPLSPL*PGRPTTPRCPA Trigger: TGCTGGACAACGTGGTGTGGTCGGTCTTCCCGGTCAGAGAGGAGAAAGAGGCTTCCCTGGTCTTCCTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | ACGCACACCCTGGGGACCTTCAGAGCCTCTAGCTCCTaGGGGACCAGCTTCACCCTTAGCACCAACTGCACC | + |
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Preference number: 6 (lower is better) Translates to: THTLGTFRASSS*GTSFTLSTNCT Trigger: GGTGCAGTTGGTGCTAAGGGTGAAGCTGGTCCCCAAGGAGCTAGAGGCTCTGAAGGTCCCCAGGGTGTGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | AATACCAGGAGCACCATTGGCACCTTTAGCGCCAGGTaGTCCATCAGCACCAGGGTTTCCAGCAGGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: NTRSTIGTFSAR*SISTRVSSRAG Trigger: GCCGGCCCTGCTGGAAACCCTGGTGCTGATGGACAACCTGGCGCTAAAGGTGCCAATGGTGCTCCTGGTATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | TCGTTTTCCTTCTTCTCCGGCAGGGCCTGGGGGACCTaGAACTCCAGTAGCACCGGGTTCTCCTTTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: SFSFFSGRAWGT*NSSSTGFSFGT Trigger: GGTGCCAAAGGAGAACCCGGTGCTACTGGAGTTCAAGGTCCCCCAGGCCCTGCCGGAGAAGAAGGAAAACGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | TTCTCCTCTCTGACCGGGAAGACCGACCACACCACGTaGTCCAGCAATACCCTGAGGTCCAGGGGTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: FSSLTGKTDHTT*SSNTLRSRGTR Trigger: CCTGGTACCCCTGGACCTCAGGGTATTGCTGGACAACGTGGTGTGGTCGGTCTTCCCGGTCAGAGAGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CCA 72 bp | TCCGGGCAGAAAGCACAGCACTCGCCCTCCCGTCTTTaGGGGTTGGGACAGTCCAGTTCTTCATTGCATTGC | + |
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Preference number: 6 (lower is better) Translates to: SGQKAQHSPSRL*GLGQSSSSLHC Trigger: GCAATGCAATGAAGAACTGGACTGTCCCAACCCCCAAAGACGGGAGGGCGAGTGCTGTGCTTTCTGCCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 90 bp | GGCCAGGGTCTCCCTTGGGTCCCTCGACTCCTACATCTTCTGAGTTaGGTGATACGTATTCTTCCGGGCAGAAAGCACAGCACTCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GQGLPWVPRLLHLLS*VIRILPGRKHSTRP Trigger: AGGGCGAGTGCTGTGCTTTCTGCCCGGAAGAATACGTATCACCAAACTCAGAAGATGTAGGAGTCGAGGGACCCAAGGGAGACCCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS TCA 72 bp | GGTCTGGGGCACCAATGTCCAAGGGAGCCACATCGATaGTGGGCAGGCGGGAGGTCTTGGTGGTTTTGTATT | + |
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Preference number: 6 (lower is better) Translates to: GLGHQCPREPHR*WAGGRSWWFCI Trigger: AATACAAAACCACCAAGACCTCCCGCCTGCCCATCATCGATGTGGCTCCCTTGGACATTGGTGCCCCAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS GCA 72 bp | CACCGGGTTCTCCTTTGGCACCAGTGTCTCCTTTGTTaGCAGGAGCACCAGGTTCACCACTGTTACCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HRVLLWHQCLLC*QEHQVHHCYPW Trigger: CCAAGGGTAACAGTGGTGAACCTGGTGCTCCTGGCAACAAAGGAGACACTGGTGCCAAAGGAGAACCCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CCA 72 bp | CCATTGTGTATGCAGCTGACTTCAGGGATGTCTTCTTaGCCATGCGTCAGGAGGGCAGTGGCCCCTAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PLCMQLTSGMSS*PCVRRAVAPKR Trigger: CCTCTTAGGGGCCACTGCCCTCCTGACGCATGGCCAAGAAGACATCCCTGAAGTCAGCTGCATACACAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 90 bp | GCCCTCCCGTCTTTGGGGGTTGGGACAGTCCAGTTCTTCATTGCATaGCACGTCATCGCACACAGCCGTGCCATTGTGGCAGATACAGAT | + |
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Preference number: 6 (lower is better) Translates to: ALPSLGVGTVQFFIA*HVIAHSRAIVADTD Trigger: ATCTGTATCTGCCACAATGGCACGGCTGTGTGCGATGACGTGCAATGCAATGAAGAACTGGACTGTCCCAACCCCCAAAGACGGGAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS GCA 72 bp | CTTTGGGGGTTGGGACAGTCCAGTTCTTCATTGCATTaGACGTCATCGCACACAGCCGTGCCATTGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LWGLGQSSSSLH*TSSHTAVPLWQ Trigger: CTGCCACAATGGCACGGCTGTGTGCGATGACGTGCAATGCAATGAAGAACTGGACTGTCCCAACCCCCAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | CGGGCACCATCTTTACCAGGAGAACCATCAGCACCTTaGGGACCAGCATCACCTCTGTCACCCTTAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: RAPSLPGEPSAP*GPASPLSPLGP Trigger: AGGTCCTAAGGGTGACAGAGGTGATGCTGGTCCCAAAGGTGCTGATGGTTCTCCTGGTAAAGATGGTGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS TCA 72 bp | CAAACCAGACGTGCTTCTTTTCCTTGGGGTTCGGGCTaGTGTACCAGTTCTTCTGAGGCACAGACGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: QTRRASFPWGSG*CTSSSEAQTAE Trigger: CTCAGCCGTCTGTGCCTCAGAAGAACTGGTACATCAGCCCGAACCCCAAGGAAAAGAAGCACGTCTGGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | TCTTTGGGGGTTGGGACAGTCCAGTTCTTCATTGCATaGCACGTCATCGCACACAGCCGTGCCATTGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SLGVGTVQFFIA*HVIAHSRAIVA Trigger: TGCCACAATGGCACGGCTGTGTGCGATGACGTGCAATGCAATGAAGAACTGGACTGTCCCAACCCCCAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS TCA 72 bp | AGAAGGACCCATGGGGCCAGGCACGGAAACTCCAGCTaGTTTTTCATCATAGCCATAGGACATCTGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: RRTHGARHGNSS*FFIIAIGHLGS Trigger: GCTTCCCAGATGTCCTATGGCTATGATGAAAAATCAGCTGGAGTTTCCGTGCCTGGCCCCATGGGTCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CCA 72 bp | TTGCATTGCACGTCATCGCACACAGCCGTGCCATTGTaGCAGATACAGATCAAGCATACCTCGGGTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LHCTSSHTAVPL*QIQIKHTSGFH Trigger: GTGGAAACCCGAGGTATGCTTGATCTGTATCTGCCACAATGGCACGGCTGTGTGCGATGACGTGCAATGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | GGTTTCCACGTCTCACCATTGGGGACCCTTAGGCCATaGTGTATGCAGCTGACTTCAGGGATGTCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GFHVSPLGTLRP*CMQLTSGMSSW Trigger: CCAAGAAGACATCCCTGAAGTCAGCTGCATACACAATGGCCTAAGGGTCCCCAATGGTGAGACGTGGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | CTCCCTTGGGTCCCTCGACTCCTACATCTTCTGAGTTaGGTGATACGTATTCTTCCGGGCAGAAAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: LPWVPRLLHLLS*VIRILPGRKHS Trigger: GCTGTGCTTTCTGCCCGGAAGAATACGTATCACCAAACTCAGAAGATGTAGGAGTCGAGGGACCCAAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 90 bp | TCCAGTTCTTCATTGCATTGCACGTCATCGCACACAGCCGTGCCATaGTGGCAGATACAGATCAAGCATACCTCGGGTTTCCACGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSSLHCTSSHTAVP*WQIQIKHTSGFHVS Trigger: TGAGACGTGGAAACCCGAGGTATGCTTGATCTGTATCTGCCACAATGGCACGGCTGTGTGCGATGACGTGCAATGCAATGAAGAACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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| CDS CAA 72 bp | TCATTGCATTGCACGTCATCGCACACAGCCGTGCCATaGTGGCAGATACAGATCAAGCATACCTCGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLHCTSSHTAVP*WQIQIKHTSGF Trigger: GAAACCCGAGGTATGCTTGATCTGTATCTGCCACAATGGCACGGCTGTGTGCGATGACGTGCAATGCAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001547.8 |
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