Pregenerated sensors for COL19A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026141Ensembl transcript IDs: ENSMUST00000051344.6, ENSMUST00000115244.9
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAATCAGTCCTAAGACAGTCAACAGCAGTAATGTACTACTTCAATCTCAAAAGAACTCAGAGCCACAATaGAACAGAACATATGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: KISPKTVNSSNVLLQSQKNSEPQ*NRTYGK Trigger: CTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTT...CTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGACTGATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| 3UTR TCA 72 bp | GTCCAAAAACTCATAAGCCTTGAGAGCACGTGGTTGTaGAGCCTGCAGTGGCGGCTCAAGTGGCCTGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: VQKLISLESTWL*SLQWRLKWPGD Trigger: ATCTCCAGGCCACTTGAGCCGCCACTGCAGGCTTCACAACCACGTGCTCTCAAGGCTTATGAGTTTTTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| 3UTR-3UTR CAA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCATAGGACTCAGATGGTaGCTTTGGATGTCTGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: EAVELRATMKQNIWKEVGIGLRW*LWMSAS Trigger: AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTAT...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| 3UTR GCA 72 bp | TGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTaGTCTTACTGTCAGAATAGGACTCAGATGGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: WKEVGKHLKIRI*SYCQNRTQMVA Trigger: AGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTGCCAGGGGGTCCAGTTaGGCCAGGAGCTCCCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASARGSS*ARSSRE Trigger: CTCTCGGGAGCTCCTGGCCCAACTGGACCCCCTGGC...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR GCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTCCGGAGTGCCAGGGATaGCAGGATTGCCTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASPECQG*QDCLEG Trigger: GCCCTCCAGGCAATCCTGGCATCCCTGGCACTCCGG...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGCGATCGGGTCACCTaGGGGGCCTGGAAGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FRSRRTQSHNETEHMERSCDRVT*GAWKAW Trigger: CCAGGCCTTCCAGGCCCCCCAGGTGACCCGATCGCA...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTCTCCCCTGGTACTCCTaGAGGGCCTGGGGCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: FRSRRTQSHNETEHMERSLPWYS*RAWGTW Trigger: CCAGGTGCCCCAGGCCCTCCAGGAGTACCAGGGGAG...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTGGCCAGGTGGCCCAGTaGAGCCCTTGCTTCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASGQVAQ*SPCFLL Trigger: CAGCAGGAAGCAAGGGCTCCACTGGGCCACCTGGCC...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCTTGCCTGGAGGGCCTTaGTGGCCAGGTGGCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGLPGGP*WPGGPV Trigger: CACTGGGCCACCTGGCCACCAAGGCCCTCCAGGCAA...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTGTAGCCTTGGGGCCCTaGATCTCCTGGGGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASVALGP*ISWGSR Trigger: CCTGGACCCCCAGGAGATCCAGGGCCCCAAGGCTAC...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR GCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGCACTTCCCGCCTGCCTaGTGGTGGGGAGGAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMHFPPA*WWGGGA Trigger: TGCACCTCCTCCCCACCAGCAGGCAGGCGGGAAGTG...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGCCCGTCCTTCCCTGGTaGGCCAGGCCTTCCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMPVLPW*ARPSMS Trigger: GCTCATGGAAGGCCTGGCCCACCAGGGAAGGACGGG...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTTCCCGCCTGCCTGCTaGTGGGGAGGAGGTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FRSRRTQSHNETEHMERSFPPAC*WGGGAG Trigger: TCCTGCACCTCCTCCCCACCAGCAGGCAGGCGGGAA...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTCCTGCAGGTCCTTGCTaGCCCTTTAGCCCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASPAGPC*PFSPGL Trigger: AAGCCCAGGGCTAAAGGGTCAGCAAGGACCTGCAGG...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR TCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCCGGCAAACCCACTGCTaGAGATCCAGGAAGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGRQTHC*RSRKTR Trigger: CCGGGTCTTCCTGGATCTTCAGCAGTGGGTTTGCCG...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR TCA 90 bp | AAAATCAGTCCTAAGACAGTCAACAGCAGTAATGTACTACTTCAATCTCAAAAGCCCCGGGGCACCTGGTaGGCCCGGCAAACCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: KISPKTVNSSNVLLQSQKPRGTW*ARQTHC Trigger: GCAGTGGGTTTGCCGGGCTCACCAGGTGCCCCGGGG...CTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGACTGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR GCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCGGGCCCCATGGAACCTaGAGGTCCTTGCTGACCCTT | + |
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Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGGPHGT*RSLLTL Trigger: AAGGGTCAGCAAGGACCTGCAGGTTCCATGGGGCCC...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR GCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGCCCAGTGGAGCCCTTaGTTCCTGCTGGTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMAQWSP*FLLVPQ Trigger: CTGTGGGACCAGCAGGAAGCAAGGGCTCCACTGGGC...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCACCTGGCTCTCCGGCTaGTCCTTGGGAGCCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGTWLSG*SLGACS Trigger: AGAACAGGCTCCCAAGGACCAGCCGGAGAGCCAGGT...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTCGCCAGGTTTACCCATaGTGCCCTGAGCACCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASRQVYP*CPEHLV Trigger: TACCAGGTGCTCAGGGCATCATGGGTAAACCTGGCG...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGAGGTCCGGGTGGTCCTaGAGGTCCTGGATTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMRSGWS*RSWISW Trigger: CCAGGAAATCCAGGACCTCCAGGACCACCCGGACCT...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTTGGCAGGCTTATCCCTaGAGGCCCAGCATCACCCTT | + |
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Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASWQAYP*RPSITL Trigger: AAGGGTGATGCTGGGCCTCCAGGGATAAGCCTGCCA...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCAGGACCCTGAATACCTaGCTCTCCGGCTGGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGRTLNT*LSGWSL Trigger: CAAGGACCAGCCGGAGAGCCAGGTATTCAGGGTCCT...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGGGGCCTGGAAGGCCTaGCTTTCCATCCTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KIRICSYCQNRTQMVALDGAWKA*LSILPW Trigger: CCAGGGAAGGATGGAAAGCCAGGCCTTCCAGGCCCC...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGTCCCGGAGGACCTCGTaGCCCTACATCACCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMSRRTS*PYITLP Trigger: AGGAAGGGTGATGTAGGGCCACGAGGTCCTCCGGGA...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATTTCACCCTGCTCCCCTaGTACTCCTGGAGGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KIRICSYCQNRTQMVALDFTLLP*YSWRAW Trigger: CCAGGCCCTCCAGGAGTACCAGGGGAGCAGGGTGAA...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTCACCGCGTTCTCCTTTaGGGCCTCTGTCGCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: FRSRRTQSHNETEHMERSHRVLL*GLCRQV Trigger: AACCTGGCGACAGAGGCCCCAAAGGAGAACGCGGTG...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR GCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATCCTGGCAAGCCCATTaGACCAGGCTCTCCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNISWQAH*TRLSHW Trigger: CCAGTGGGAGAGCCTGGTGCAATGGGCTTGCCAGGA...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR GCA 90 bp | GAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGAATAGGACTGGAGCCCTTGCTTCCTaGTGGTCCCACAGGGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: EVGKHLKIRICSYCQNRTGALAS*WSHRAY Trigger: ATAGGCCCTGTGGGACCAGCAGGAAGCAAGGGCTCC...AGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR GCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATACAGCATCAGCCGGAGTaGCAGGGATGCCAGGATTGC | + |
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Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNIQHQPE*QGCQDC Trigger: GCAATCCTGGCATCCCTGGCACTCCGGCTGATGCTG...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTTTGCCAGGTGGACCCTaGGGACCTTGGATTCCTATG | + |
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Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASLPGGP*GPWIPM Trigger: CATAGGAATCCAAGGTCCCCAGGGTCCACCTGGCAA...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGTCCTGGAGGTCCTaGATTTCCTGGGGGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FRSRRTQSHNETEHMERSWSWRS*ISWGSC Trigger: ACAGGACCCCCAGGAAATCCAGGACCTCCAGGACCA...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCACTCCTGGTGGTCCTCTaGGCCCCATGGAACCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: HMERSWQTSENTDLLLLSLLVVL*APWNLQ Trigger: CTGCAGGTTCCATGGGGCCCAGAGGACCACCAGGAG...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGGGGCCCGGAGGTCCTaGGTAACCGGGAACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: HMERSWQTSENTDLLLLSGARRS*VTGNIH Trigger: GTGAATGTTCCCGGTTACCCAGGACCTCCGGGCCCC...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATACTCCTGGAGGGCCTaGGGCACCTGGTTTTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNIYSWRA*GTWFSR Trigger: TCGGGAAAACCAGGTGCCCCAGGCCCTCCAGGAGTA...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCGATTACATCTTCCACTaGGTCCCGGGGGTCCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGDYIFH*VPGVLE Trigger: CTCAAGGACCCCCGGGACCCAGTGGAAGATGTAATC...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTCCAGGGACATTGGCTTaGCAGTTGCCACAGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASPGTLA*QLPQKF Trigger: GAACTTCTGTGGCAACTGTCAAGCCAATGTCCCTGG...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR TCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCTTCCGTCATCGCCTTTaGTGCTTTTCAGCCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGFRHRL*CFSAQG Trigger: TCCCTGGGCTGAAAAGCATCAAAGGCGATGACGGAA...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR GCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATAAGCCCCGCTCTCCTTTaGTTCCCTTTGGCCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNISPALL*FPLALL Trigger: GAGAAGGGCCAAAGGGAAGCAAAGGAGAGCGGGGCT...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATAGCCTTCTTTGCCAGGTaGACCCTGGGGACCTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNIAFFAR*TLGTLD Trigger: ATCCAAGGTCCCCAGGGTCCACCTGGCAAAGAAGGC...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTCCTCGTCTTCCCCTTTaGCCTTCTTTGCCAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FRSRRTQSHNETEHMERSPRLPL*PSLPGG Trigger: TCCACCTGGCAAAGAAGGCCAAAGGGGAAGACGAGG...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGTCCTCTGGGCCCCATaGAACCTGCAGGTCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: HMERSWQTSENTDLLLLSVLWAP*NLQVLA Trigger: AGCAAGGACCTGCAGGTTCCATGGGGCCCAGAGGAC...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCTCCTTTGCTTCCCTTTaGCCCTTCTCTGCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGSFASL*PFSAWE Trigger: TTCCCAGGCAGAGAAGGGCCAAAGGGAAGCAAAGGA...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCCACCTTTTGCTCCAGTaGGACCAGGATGTCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGHLLLQ*DQDVQF Trigger: GAACTGGACATCCTGGTCCCACTGGAGCAAAAGGTG...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGCATGCCCGTAAGACCTaGCTTCCCACGTTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMHARKT*LPTFTL Trigger: CAAGGTGAACGTGGGAAGCCAGGTCTTACGGGCATG...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTAACCATCTTGTCCATTaGGGCCATCCAGACCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASNHLVH*GHPDQS Trigger: ACTCTGGTCTGGATGGCCTCAATGGACAAGATGGTT...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR GCA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGGTCCTCTTTCACCCTaGTCCCCTGGTACTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HMERSWQTSENTDLLLLSGPLSP*SPGTPG Trigger: TCCAGGAGTACCAGGGGAGCAGGGTGAAAGAGGACC...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCATCCTTTTGGGCCAGGTaGACCTTGAGGACCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HMERSWQTSENTDLLLLSSFWAR*TLRTRV Trigger: GACTCGGGTCCTCAAGGTCCACCTGGCCCAAAAGGA...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATAACCCTTGTCTCCTTTTaGGCCAGGTGGACCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNITLVSF*ARWTLR Trigger: CCTCAAGGTCCACCTGGCCCAAAAGGAGACAAGGGT...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATACAATCCAACATCTCCTaGTGGTCCTCTGGGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNIQSNIS*WSSGPH Trigger: ATGGGGCCCAGAGGACCACCAGGAGATGTTGGATTG...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | AAAATCAGTCCTAAGACAGTCAACAGCAGTAATGTACTACTTCAATCTCAAAAGTGGCCCTTCTCTGCCTaGGAATCCCGGAGGACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KISPKTVNSSNVLLQSQKWPFSA*ESRRTS Trigger: CGAGGTCCTCCGGGATTCCCAGGCAGAGAAGGGCCA...CTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGACTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAACCAGGCTCTCCCACTaGGCCAGGATCACCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HMERSWQTSENTDLLLLSTRLSH*ARITFW Trigger: CCAAAAGGTGATCCTGGCCCAGTGGGAGAGCCTGGT...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAAGGGCCTCTGTCTCCTaGAATTCCCTGATCACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: HMERSWQTSENTDLLLLSRASVS*NSLITA Trigger: CGCGGTGATCAGGGAATTCCAGGAGACAGAGGCCCT...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR TCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGTTTCTGGCTTGTCCCTaGCTGTCAGACAGGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMFLACP*LSDRYM Trigger: CATGTACCTGTCTGACAGTCAGGGACAAGCCAGAAA...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCCCAAGTTTATGCCATTaGCGATCAAAGAGTGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGPSLCH*RSKSGR Trigger: CCGTCCACTCTTTGATCGTCAATGGCATAAACTTGG...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATAAGGGCAGGTTGTTTCTaGCTTGTCCCTGACTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNIRAGCF*LVPDCQ Trigger: CTGACAGTCAGGGACAAGCCAGAAACAACCTGCCCT...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATTTTCCATTTATGCCTaGCTTCCCCGAGGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNIFSIYA*LPRGSL Trigger: GAGGGACCCTCGGGGAAGCCAGGCATAAATGGAAAA...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR TCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGCACAGGTTTGCCATCTaGAGCTCGTGCAGCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMHRFAI*SSCSNN Trigger: ATTATTGCTGCACGAGCTTCAGATGGCAAACCTGTG...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR TCA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCATCTCCTGGAATTCCCTaGTCACCGCGTTCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HMERSWQTSENTDLLLLSSPGIP*SPRSPL Trigger: CAAAGGAGAACGCGGTGATCAGGGAATTCCAGGAGA...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR GCA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGTCAGACAGGTACATaGAGGAAGCAGGAAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRSRRTQSHNETEHMERSCQTGT*RKQEGC Trigger: ACAACCTTCCTGCTTCCTGCATGTACCTGTCTGACA...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCACCGTTCCTTTTTGGTaGTTCTTCGTACCCGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGTVPFW*FFVPET Trigger: TGTTTCGGGTACGAAGAAGCACCAAAAAGGAACGGT...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR GCA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATCGATATCCACAGGTTTaGCATCTGAAGCTCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIRICSYCQNRTQMVALDRYPQV*HLKLVQ Trigger: CTGCACGAGCTTCAGATGGCAAACCTGTGGATATCG...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR GCA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAACCCTTGTCACCTTTTaGTCCAGTGGGACCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HMERSWQTSENTDLLLLSTLVTF*SSGTRM Trigger: CATCCTGGTCCCACTGGAGCAAAAGGTGACAAGGGT...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTCACCAGTTCCCTTATTaGAATATCCACCAAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASHQFPY*NIHQKA Trigger: AGCCTTTTGGTGGATATTTCAATAAGGGAACTGGTG...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATACCACCGTTCCTTTTTaGTGCTTCTTCGTACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KIRICSYCQNRTQMVALDTTVPF*CFFVPE Trigger: TTCGGGTACGAAGAAGCACCAAAAAGGAACGGTGGT...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTCCTTTGGCTCCTaGTTCACCCTTTTCACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KIRICSYCQNRTQMVALDVSFGS*FTLFTN Trigger: ATTGGTGAAAAGGGTGAACCAGGAGCCAAAGGAGAC...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | AAAATCAGTCCTAAGACAGTCAACAGCAGTAATGTACTACTTCAATCTCAAAAGCTTTCCATCCTTCCCTaGAGCTCCGTCATTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KISPKTVNSSNVLLQSQKLSILP*SSVIPW Trigger: CCAGGGAATGACGGAGCTCCAGGGAAGGATGGAAAG...CTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGACTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCATAGAGGCAATCTTCTaGATTACATCTTCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EAVELRATMKQNIWKEVGIEAIF*ITSSTG Trigger: CCCAGTGGAAGATGTAATCCAGAAGATTGCCTCTAT...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTCTTTCCTGGCAGATATaGAGACATTTTACCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASLSWQI*RHFTSV Trigger: AACACTGGTAAAATGTCTTCATATCTGCCAGGAAAG...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGTTGACGATCAAAGAGTaGACGGAGTTCTCGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMLTIKE*TEFSIL Trigger: AAGAATCGAGAACTCCGTCCACTCTTTGATCGTCAA...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATAAATACCATGTTCTCCTaGCAATCCAACATCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHFSSEAVELRATMKQNINTMFS*QSNISW Trigger: CCAGGAGATGTTGGATTGCCAGGAGAACATGGTATT...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | GAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGAATAGGACTAACGCCTTGTTTTCCTaGAATACCATGTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGKHLKIRICSYCQNRTNALFS*NTMFSW Trigger: CCAGGAGAACATGGTATTCCAGGAAAACAAGGCGTT...AGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | AAAATCAGTCCTAAGACAGTCAACAGCAGTAATGTACTACTTCAATCTCAAAAGTCAGCCCAGGGACATTaGCTTGACAGTTGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KISPKTVNSSNVLLQSQKSAQGH*LDSCHR Trigger: TCTGTGGCAACTGTCAAGCCAATGTCCCTGGGCTGA...CTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGACTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTTTGTTTCTGTCATCTTaGTATCTCTCTGTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASLFLSS*YLSVLS Trigger: ACTGAGAACAGAGAGATATCAAGATGACAGAAACAA...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR TCA 90 bp | GAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGAATAGGACTGCACACTTCCCAACTTaGAACAGGTTTTATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVGKHLKIRICSYCQNRTAHFPT*NRFYHL Trigger: AAGGTGATAAAACCTGTTTCAAGTTGGGAAGTGTGC...AGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTATAGCGTATTCCTCTaGAAGGCCTTTGGGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: FRSRRTQSHNETEHMERSYSVFL*KAFGKY Trigger: ATATTTCCCAAAGGCCTTCCAGAGGAATACGCTATA...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTTTGTTTGGAATACACTaGCATGTGTCTTTAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASLFGIH*HVSLSS Trigger: GGAACTTAAAGACACATGCCAGTGTATTCCAAACAA...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR TCA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATTCCCAGATCAAAGCCTaGCAATTCAGATTTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KIRICSYCQNRTQMVALDSQIKA*QFRFVS Trigger: AGAAACAAATCTGAATTGTCAGGCTTTGATCTGGGA...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR GCA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGATCTGGGCCATATTCTaGTGGTTTAAAATCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFFFRSRRTQSHNETEHMIWAIF*WFKIFH Trigger: ATGGAAGATTTTAAACCAGCAGAATATGGCCCAGAT...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR GCA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTGTCTTTAAGTTCCTaGTTTCCTGGCAGATATGAA | + |
|
Preference number: 4 (lower is better) Translates to: KIRICSYCQNRTQMVALDVSLSS*FPGRYE Trigger: TTCATATCTGCCAGGAAAGCAGGAACTTAAAGACAC...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTTGGGCCATATTCTGCTaGTTTAAAATCTTCCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SALTVRIGLRWLLWMSASWAIFC*FKIFHK Trigger: TTTATGGAAGATTTTAAACCAGCAGAATATGGCCCA...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR GCA 90 bp | AAAATCAGTCCTAAGACAGTCAACAGCAGTAATGTACTACTTCAATCTCAAAAGCTTCCAAAGTCGTCTTaGTCTGGACACTTAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KISPKTVNSSNVLLQSQKLPKSS*SGHLVG Trigger: ACCTACTAAGTGTCCAGAGCAAGACGACTTTGGAAG...CTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGACTGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR GCA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGGATTTTATATAAACTaGTCATGCCGTTTCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KIRICSYCQNRTQMVALDGFYIN*SCRFPH Trigger: ATGAGGGAAACGGCATGAGCAGTTTATATAAAATCC...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CCA 90 bp | AAAATCAGTCCTAAGACAGTCAACAGCAGTAATGTACTACTTCAATCTCAAAAGACATTCACCCCTCCCTaGATTTTATATAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KISPKTVNSSNVLLQSQKTFTPP*ILYKLL Trigger: GAGCAGTTTATATAAAATCCAGGGAGGGGTGAATGT...CTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGACTGATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS CCA 90 bp | TCCGGCTGGTCCTTGGGAGCCTGTTCTACCAGGGATTCCTACACCTaGTGGGCCTGTGTCCCCGGGGGAACCGTGGAGCCCAGGCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SGWSLGACSTRDSYT*WACVPGGTVEPRQT Trigger: GGTCTGCCTGGGCTCCACGGTTCCCCCGGGGACACAGGCCCACCAGGTGTAGGAATCCCTGGTAGAACAGGCTCCCAAGGACCAGCCGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 90 bp | CCAGGGATTCCTACACCTGGTGGGCCTGTGTCCCCGGGGGAACCGTaGAGCCCAGGCAGACCTCTTTCACCCTTTGGCCCACGTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: PGIPTPGGPVSPGEP*SPGRPLSPFGPRGP Trigger: TGGTCCACGTGGGCCAAAGGGTGAAAGAGGTCTGCCTGGGCTCCACGGTTCCCCCGGGGACACAGGCCCACCAGGTGTAGGAATCCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 90 bp | AGTGCCAGGGATGCCAGGATTGCCTGGAGGGCCTTGGTGGCCAGGTaGCCCAGTGGAGCCCTTGCTTCCTGCTGGTCCCACAGGGCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SARDARIAWRALVAR*PSGALASCWSHRAY Trigger: ATAGGCCCTGTGGGACCAGCAGGAAGCAAGGGCTCCACTGGGCCACCTGGCCACCAAGGCCCTCCAGGCAATCCTGGCATCCCTGGCACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 90 bp | AGGGTAGCCCCGCTCTCCTTTGCTTCCCTTTGGCCCTTCTCTGCCTaGGAATCCCGGAGGACCTCGTGGCCCTACATCACCCTTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVAPLSFASLWPFSA*ESRRTSWPYITLPG Trigger: GCCAGGAAGGGTGATGTAGGGCCACGAGGTCCTCCGGGATTCCCAGGCAGAGAAGGGCCAAAGGGAAGCAAAGGAGAGCGGGGCTACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS GCA 90 bp | TGGGAATCCCGGAGGACCTCGTGGCCCTACATCACCCTTCCTGGCTaGAGGATCATACTTTCCAGGCTCCCCAGTGCTTCCGTCATCGCC | + |
|
Preference number: 5 (lower is better) Translates to: WESRRTSWPYITLPG*RIILSRLPSASVIA Trigger: GGCGATGACGGAAGCACTGGGGAGCCTGGAAAGTATGATCCTGCAGCCAGGAAGGGTGATGTAGGGCCACGAGGTCCTCCGGGATTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 90 bp | CGTCTTCCCCTTTGGCCTTCTTTGCCAGGTGGACCCTGGGGACCTTaGATTCCTATGGAGCCAGTTAAGGCTGGTGGCCCTGGAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLPLWPSLPGGPWGP*IPMEPVKAGGPGGP Trigger: GGGACCTCCAGGGCCACCAGCCTTAACTGGCTCCATAGGAATCCAAGGTCCCCAGGGTCCACCTGGCAAAGAAGGCCAAAGGGGAAGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | ATCCTTCCCTGGAGCTCCGTCATTCCCTGGCATCCCTGGAGTTCCTaGCAATCCAGGCAGACCTCGAGGACCCTGAATACCTGGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILPWSSVIPWHPWSS*QSRQTSRTLNTWLS Trigger: GGAGAGCCAGGTATTCAGGGTCCTCGAGGTCTGCCTGGATTGCCAGGAACTCCAGGGATGCCAGGGAATGACGGAGCTCCAGGGAAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | GCTTCCCTTTGGCCCTTCTCTGCCTGGGAATCCCGGAGGACCTCGTaGCCCTACATCACCCTTCCTGGCTGCAGGATCATACTTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLWPFSAWESRRTS*PYITLPGCRIILSR Trigger: CCTGGAAAGTATGATCCTGCAGCCAGGAAGGGTGATGTAGGGCCACGAGGTCCTCCGGGATTCCCAGGCAGAGAAGGGCCAAAGGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | GTTCTCCTGGCAATCCAACATCTCCTGGTGGTCCTCTGGGCCCCATaGAACCTGCAGGTCCTTGCTGACCCTTTAGCCCTGGGCTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: VLLAIQHLLVVLWAP*NLQVLADPLALGFL Trigger: TAGGAAGCCCAGGGCTAAAGGGTCAGCAAGGACCTGCAGGTTCCATGGGGCCCAGAGGACCACCAGGAGATGTTGGATTGCCAGGAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | GTTTTCCCTCGTCTTCCCCTTTGGCCTTCTTTGCCAGGTGGACCCTaGGGACCTTGGATTCCTATGGAGCCAGTTAAGGCTGGTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VFPRLPLWPSLPGGP*GPWIPMEPVKAGGP Trigger: AGGGCCACCAGCCTTAACTGGCTCCATAGGAATCCAAGGTCCCCAGGGTCCACCTGGCAAAGAAGGCCAAAGGGGAAGACGAGGGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | GAATACCATGTTCTCCTGGCAATCCAACATCTCCTGGTGGTCCTCTaGGCCCCATGGAACCTGCAGGTCCTTGCTGACCCTTTAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EYHVLLAIQHLLVVL*APWNLQVLADPLAL Trigger: CAGGGCTAAAGGGTCAGCAAGGACCTGCAGGTTCCATGGGGCCCAGAGGACCACCAGGAGATGTTGGATTGCCAGGAGAACATGGTATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | TGGCCCTGGAGGTCCCATATCACCCTTGTCTCCTTTTGGGCCAGGTaGACCTTGAGGACCCGAGTCACCTTTCAAACCATCTTGTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: WPWRSHITLVSFWAR*TLRTRVTFQTILSI Trigger: AATGGACAAGATGGTTTGAAAGGTGACTCGGGTCCTCAAGGTCCACCTGGCCCAAAAGGAGACAAGGGTGATATGGGACCTCCAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS TCA 90 bp | CTTCCGTCATCGCCTTTGATGCTTTTCAGCCCAGGGACATTGGCTTaGCAGTTGCCACAGAAGTTCTTCAGCAGGGCTCCAATGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPSSPLMLFSPGTLA*QLPQKFFSRAPMSP Trigger: GGGAGACATTGGAGCCCTGCTGAAGAACTTCTGTGGCAACTGTCAAGCCAATGTCCCTGGGCTGAAAAGCATCAAAGGCGATGACGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS TCA 90 bp | CAGGATCATACTTTCCAGGCTCCCCAGTGCTTCCGTCATCGCCTTTaGTGCTTTTCAGCCCAGGGACATTGGCTTGACAGTTGCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: QDHTFQAPQCFRHRL*CFSAQGHWLDSCHR Trigger: TCTGTGGCAACTGTCAAGCCAATGTCCCTGGGCTGAAAAGCATCAAAGGCGATGACGGAAGCACTGGGGAGCCTGGAAAGTATGATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS GCA 90 bp | AGGGCAGGTTGTTTCTGGCTTGTCCCTGACTGTCAGACAGGTACATaGAGGAAGCAGGAAGGTTGTCACCCAGGTCCACAATTTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAGCFWLVPDCQTGT*RKQEGCHPGPQFPR Trigger: TCTTGGAAATTGTGGACCTGGGTGACAACCTTCCTGCTTCCTGCATGTACCTGTCTGACAGTCAGGGACAAGCCAGAAACAACCTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | CCTTCCACCCGGATCTCCCTTTTCTCCCTTAACGCCTTGTTTTCCTaGAATACCATGTTCTCCTGGCAATCCAACATCTCCTGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSTRISLFSLNALFS*NTMFSWQSNISWWS Trigger: GGACCACCAGGAGATGTTGGATTGCCAGGAGAACATGGTATTCCAGGAAAACAAGGCGTTAAGGGAGAAAAGGGAGATCCGGGTGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGCCAGGGATGCCAGGATaGCCTGGAGGGCCTTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AFFFRSRRTQSHNETEHMPGMPG*PGGPWW Trigger: CCACCAAGGCCCTCCAGGCAATCCTGGCATCCCTGG...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCCTTCCCACGTTCACCTaGAGGGCCTCTGTCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EAVELRATMKQNIWKEVGLPTFT*RASVSW Trigger: CCAGGAGACAGAGGCCCTCAAGGTGAACGTGGGAAG...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGAATAGGACTGGCCCAGTGGAGCCCTaGCTTCCTGCTGGTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: EVGKHLKIRICSYCQNRTGPVEP*LPAGPT Trigger: TGTGGGACCAGCAGGAAGCAAGGGCTCCACTGGGCC...AGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CAA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTCTCCTTTGCTTCCCTTaGGCCCTTCTCTGCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SALTVRIGLRWLLWMSASLLCFP*ALLCLG Trigger: TCCCAGGCAGAGAAGGGCCAAAGGGAAGCAAAGGAG...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCCTGGCAAGCCCATaGCACCAGGCTCTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KIRICSYCQNRTQMVALDVLASP*HQALPL Trigger: CAGTGGGAGAGCCTGGTGCAATGGGCTTGCCAGGAC...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS TCA 90 bp | CATGTTCACCCGGCTCTCCTTTGTCGCCCTTATGTCCAATGGATCTaGGAGTTCCTGGTAATCCTGCTTCCTCCTTGTTTGGAATACACT | + |
|
Preference number: 5 (lower is better) Translates to: HVHPALLCRPYVQWI*EFLVILLPPCLEYT Trigger: AGTGTATTCCAAACAAGGAGGAAGCAGGATTACCAGGAACTCTCAGATCCATTGGACATAAGGGCGACAAAGGAGAGCCGGGTGAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS TCA 90 bp | TCACCAATTTCTCCCTTGATGCCTTCAAGTCCTTGTTCTCCCTTTTaGCCAGGTAATCCTGGAGTACCATCTAAGCCATGTTCACCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPISPLMPSSPCSPF*PGNPGVPSKPCSPG Trigger: GCCGGGTGAACATGGCTTAGATGGTACTCCAGGATTACCTGGTCAAAAGGGAGAACAAGGACTTGAAGGCATCAAGGGAGAAATTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | GTCATCTTGATATCTCTCTGTTCTCAGTGTAGGGCAGGTTGTTTCTaGCTTGTCCCTGACTGTCAGACAGGTACATGCAGGAAGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VILISLCSQCRAGCF*LVPDCQTGTCRKQE Trigger: TTCCTGCTTCCTGCATGTACCTGTCTGACAGTCAGGGACAAGCCAGAAACAACCTGCCCTACACTGAGAACAGAGAGATATCAAGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCCCTCGTCTTCCCCTTaGGCCTTCTTTGCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVGKHLKIRICSYCQNRTPSSSP*AFFARW Trigger: CCACCTGGCAAAGAAGGCCAAAGGGGAAGACGAGGG...AGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGACCTCTTTCACCCTTaGGCCCACGTGGACCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KIRICSYCQNRTQMVALDDLFHP*AHVDQV Trigger: CACCTGGTCCACGTGGGCCAAAGGGTGAAAGAGGTC...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCACTCTCCGGCTGGTCCTaGGGAGCCTGTTCTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HMERSWQTSENTDLLLLSLSGWS*GACSTR Trigger: CCTGGTAGAACAGGCTCCCAAGGACCAGCCGGAGAG...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTCTTCCGTCATCGCCTTaGATGCTTTTCAGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SALTVRIGLRWLLWMSASLPSSP*MLFSPG Trigger: CCCTGGGCTGAAAAGCATCAAAGGCGATGACGGAAG...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTTACCCTTGTCACCTTTaGCTCCAGTGGGACCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SALTVRIGLRWLLWMSASYPCHL*LQWDQD Trigger: ATCCTGGTCCCACTGGAGCAAAAGGTGACAAGGGTA...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTGGTCCCTCACTACCCTaGTCACCTTTTGCTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FRSRRTQSHNETEHMERSGPSLP*SPFAPV Trigger: CACTGGAGCAAAAGGTGACAAGGGTAGTGAGGGACC...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCAACCACCGTTCCTTTTaGGTGCTTCTTCGTACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EAVELRATMKQNIWKEVGNHRSF*VLLRTR Trigger: TCGGGTACGAAGAAGCACCAAAAAGGAACGGTGGTT...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | TCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGTCTGCTTCTGATGCCTTCAAGTCCTaGTTCTCCCTTTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SALTVRIGLRWLLWMSASDAFKS*FSLLTR Trigger: CCTGGTCAAAAGGGAGAACAAGGACTTGAAGGCATC...AGAAGCAGACATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGAATAGGACTGGTCCCATATCACCCTaGTCTCCTTTTGGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EVGKHLKIRICSYCQNRTGPISP*SPFGPG Trigger: ACCTGGCCCAAAAGGAGACAAGGGTGATATGGGACC...AGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTCCCAGGGACATTGGCTaGACAGTTGCCACAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FRSRRTQSHNETEHMERSPRDIG*TVATEV Trigger: AACTTCTGTGGCAACTGTCAAGCCAATGTCCCTGGG...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | AAAATCAGTCCTAAGACAGTCAACAGCAGTAATGTACTACTTCAATCTCAAAAGTCACCGCGTTCTCCTTaGGGGCCTCTGTCGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KISPKTVNSSNVLLQSQKSPRSP*GPLSPG Trigger: ACCTGGCGACAGAGGCCCCAAAGGAGAACGCGGTGA...CTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGACTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS GCA 90 bp | AATTGCAATCCATATAGAGAGAAAGGACTCGGGATTGCACGCCAATaGCAAGTTTATGCCATTGACGATCAAAGAGTGGACGGAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NCNPYREKGLGIARQ*QVYAIDDQRVDGVL Trigger: GAGAACTCCGTCCACTCTTTGATCGTCAATGGCATAAACTTGGCATTGGCGTGCAATCCCGAGTCCTTTCTCTCTATATGGATTGCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | AAAATCAGTCCTAAGACAGTCAACAGCAGTAATGTACTACTTCAATCTCAAAAGTGGGCCAGGTGGACCTaGAGGACCCGAGTCACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KISPKTVNSSNVLLQSQKWARWT*RTRVTF Trigger: AAAGGTGACTCGGGTCCTCAAGGTCCACCTGGCCCA...CTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGACTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTGGCCTCCCTTTTCACCTTTaGTTAAAGGCTCCCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EAVELRATMKQNIWKEVGLPFHL*LKAPQV Trigger: AACCTGGGGAGCCTTTAACAAAAGGTGAAAAGGGAG...GCCAACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS GCA 90 bp | ACACTTCCCAACTTGAAACAGGTTTTATCACCTTCGCAAAACGCATaGCTCAGAGCAAAGCTTTCTCCCAGATCAAAGCCTGACAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLPNLKQVLSPSQNA*LRAKLSPRSKPDNS Trigger: TGAATTGTCAGGCTTTGATCTGGGAGAAAGCTTTGCTCTGAGGCATGCGTTTTGCGAAGGTGATAAAACCTGTTTCAAGTTGGGAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | GGTGCTTCTTCGTACCCGAAACATGACAGCTATAGCGTATTCCTCTaGAAGGCCTTTGGGAAATATCTTAACAGTGTCTCTGATAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GASSYPKHDSYSVFL*KAFGKYLNSVSDKK Trigger: CTTCTTATCAGAGACACTGTTAAGATATTTCCCAAAGGCCTTCCAGAGGAATACGCTATAGCTGTCATGTTTCGGGTACGAAGAAGCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAGAATAGGACTTCGATATCCACAGGTTaGCCATCTGAAGCTCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EVGKHLKIRICSYCQNRTSISTG*PSEARA Trigger: TGCACGAGCTTCAGATGGCAAACCTGTGGATATCGA...AGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGCTGCTTCCTCCTTGTTaGGAATACACTGGCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AFFFRSRRTQSHNETEHMLLPPC*EYTGMC Trigger: ACACATGCCAGTGTATTCCAAACAAGGAGGAAGCAG...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAAGACCAGAGTCTCCTTaGGCTCCTGGTTCACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HMERSWQTSENTDLLLLSRPESP*APGSPF Trigger: AAAGGGTGAACCAGGAGCCAAAGGAGACTCTGGTCT...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | GCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGACCTTTCAAACCATCTaGTCCATTGAGGCCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AFFFRSRRTQSHNETEHMTFQTI*SIEAIQ Trigger: CTGGATGGCCTCAATGGACAAGATGGTTTGAAAGGT...CATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS TCA 90 bp | TCTCCCAGATCAAAGCCTGACAATTCAGATTTGTTTCTGTCATCTTaGTATCTCTCTGTTCTCAGTGTAGGGCAGGTTGTTTCTGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPRSKPDNSDLFLSS*YLSVLSVGQVVSGL Trigger: CAAGCCAGAAACAACCTGCCCTACACTGAGAACAGAGAGATATCAAGATGACAGAAACAAATCTGAATTGTCAGGCTTTGATCTGGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 90 bp | GGATTGCACGCCAATGCCAAGTTTATGCCATTGACGATCAAAGAGTaGACGGAGTTCTCGATTCTTAAAAACATAGTTCAACAGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLHANAKFMPLTIKE*TEFSILKNIVQQIS Trigger: GGAGATCTGTTGAACTATGTTTTTAAGAATCGAGAACTCCGTCCACTCTTTGATCGTCAATGGCATAAACTTGGCATTGGCGTGCAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS-3UTR CAA 90 bp | TTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATGGAAAGAAGTTCCTCTGGAAGGCCTTaGGGAAATATCTTAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FRSRRTQSHNETEHMERSSSGRP*GNILTV Trigger: CACTGTTAAGATATTTCCCAAAGGCCTTCCAGAGGA...ACTTCTTTCCATATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CAA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAAAACCATCTTGTCCATaGAGGCCATCCAGACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HMERSWQTSENTDLLLLSKPSCP*RPSRPE Trigger: CTCTGGTCTGGATGGCCTCAATGGACAAGATGGTTT...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS TCA 90 bp | GCAAAACGCATGCCTCAGAGCAAAGCTTTCTCCCAGATCAAAGCCTaGCAATTCAGATTTGTTTCTGTCATCTTGATATCTCTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AKRMPQSKAFSQIKA*QFRFVSVILISLCS Trigger: AGAACAGAGAGATATCAAGATGACAGAAACAAATCTGAATTGTCAGGCTTTGATCTGGGAGAAAGCTTTGCTCTGAGGCATGCGTTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS TCA 90 bp | GTAGATTCTAAGTTGGTGAAGTTCGATATCCACAGGTTTGCCATCTaGAGCTCGTGCAGCAATAATTGTCCTTCCTTGAAAATCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VDSKLVKFDIHRFAI*SSCSNNCPSLKIHR Trigger: TCTGTGGATTTTCAAGGAAGGACAATTATTGCTGCACGAGCTTCAGATGGCAAACCTGTGGATATCGAACTTCACCAACTTAGAATCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS GCA 90 bp | AATCCACAGAATTCTTTTCTTCCGTGTGTCGACTTGCAATTAAATTaGAATCCATATAGAGAGAAAGGACTCGGGATTGCACGCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: NPQNSFLPCVDLQLN*NPYREKGLGIARQC Trigger: GCATTGGCGTGCAATCCCGAGTCCTTTCTCTCTATATGGATTGCAATTTAATTGCAAGTCGACACACGGAAGAAAAGAATTCTGTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS-3UTR CAA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATTCACCAATTTCTCCCTaGATGCCTTCAAGTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KIRICSYCQNRTQMVALDSPISP*MPSSPC Trigger: ACAAGGACTTGAAGGCATCAAGGGAGAAATTGGTGA...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CAA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATGCAGTAGATTCTAAGTaGGTGAAGTTCGATATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KIRICSYCQNRTQMVALDAVDSK*VKFDIH Trigger: GTGGATATCGAACTTCACCAACTTAGAATCTACTGC...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CAA 90 bp | CATATGGAAAGAAGTTGGCAAACATCTGAAAATACGGATCTGCTCTTACTGTCAAATCCTGCTTCCTCCTaGTTTGGAATACACTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HMERSWQTSENTDLLLLSNPASS*FGIHWH Trigger: ATGCCAGTGTATTCCAAACAAGGAGGAAGCAGGATT...TGACAGTAAGAGCAGATCCGTATTTTCAGATGTTTGCCAACTTCTTTCCATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CAA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATCACCAGTTCCCTTATaGAAATATCCACCAAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LHFSSEAVELRATMKQNISPVPL*KYPPKG Trigger: GCCTTTTGGTGGATATTTCAATAAGGGAACTGGTGA...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CAA 90 bp | AAAATACGGATCTGCTCTTACTGTCAGAATAGGACTCAGATGGTTGCTTTGGATTTTGTTTCTGTCATCTaGATATCTCTCTGTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KIRICSYCQNRTQMVALDFVSVI*ISLCSQ Trigger: CTGAGAACAGAGAGATATCAAGATGACAGAAACAAA...ATCCAAAGCAACCATCTGAGTCCTATTCTGACAGTAAGAGCAGATCCGTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS-3UTR CAA 90 bp | TTGCATTTTTCTTCCGAAGCCGTAGAACTCAGAGCCACAATGAAACAGAACATATTAGTAGGTGATAAGTaGCAACATGATTCTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHFSSEAVELRATMKQNILVGDK*QHDSSA Trigger: AGCTGAAGAATCATGTTGCAACTTATCACCTACTAA...TATGTTCTGTTTCATTGTGGCTCTGAGTTCTACGGCTTCGGAAGAAAAATGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115244.9 |
||
| CDS CCA 72 bp | CCTACACCTGGTGGGCCTGTGTCCCCGGGGGAACCGTaGAGCCCAGGCAGACCTCTTTCACCCTTTGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PTPGGPVSPGEP*SPGRPLSPFGP Trigger: TGGGCCAAAGGGTGAAAGAGGTCTGCCTGGGCTCCACGGTTCCCCCGGGGACACAGGCCCACCAGGTGTAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 72 bp | TTGGGAGCCTGTTCTACCAGGGATTCCTACACCTGGTaGGCCTGTGTCCCCGGGGGAACCGTGGAGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGACSTRDSYTW*ACVPGGTVEPR Trigger: CCTGGGCTCCACGGTTCCCCCGGGGACACAGGCCCACCAGGTGTAGGAATCCCTGGTAGAACAGGCTCCCAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 72 bp | TCCTTGGGAGCCTGTTCTACCAGGGATTCCTACACCTaGTGGGCCTGTGTCCCCGGGGGAACCGTGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLGACSTRDSYT*WACVPGGTVEP Trigger: GGGCTCCACGGTTCCCCCGGGGACACAGGCCCACCAGGTGTAGGAATCCCTGGTAGAACAGGCTCCCAAGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 90 bp | AGGCAGACCTCGAGGACCCTGAATACCTGGCTCTCCGGCTGGTCCTaGGGAGCCTGTTCTACCAGGGATTCCTACACCTGGTGGGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RQTSRTLNTWLSGWS*GACSTRDSYTWWAC Trigger: ACAGGCCCACCAGGTGTAGGAATCCCTGGTAGAACAGGCTCCCAAGGACCAGCCGGAGAGCCAGGTATTCAGGGTCCTCGAGGTCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS GCA 72 bp | CGGAGGACCTCGTGGCCCTACATCACCCTTCCTGGCTaGAGGATCATACTTTCCAGGCTCCCCAGTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRTSWPYITLPG*RIILSRLPSAS Trigger: GGAAGCACTGGGGAGCCTGGAAAGTATGATCCTGCAGCCAGGAAGGGTGATGTAGGGCCACGAGGTCCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 72 bp | TGGCCCTTCTCTGCCTGGGAATCCCGGAGGACCTCGTaGCCCTACATCACCCTTCCTGGCTGCAGGATCATA | + |
|
Preference number: 6 (lower is better) Translates to: WPFSAWESRRTS*PYITLPGCRII Trigger: TATGATCCTGCAGCCAGGAAGGGTGATGTAGGGCCACGAGGTCCTCCGGGATTCCCAGGCAGAGAAGGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS TCA 72 bp | GTTGGGCCAGGAGCTCCCGAGAGGCCAGGGATTCCTTaGAGACCCTCATCGCCTTTCTCCCCGTGTATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VGPGAPERPGIP*RPSSPFSPCIP Trigger: TGGAATACACGGGGAGAAAGGCGATGAGGGTCTTCAAGGAATCCCTGGCCTCTCGGGAGCTCCTGGCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS GCA 72 bp | CTTCAAATGAAACAGCATCAGCCGGAGTGCCAGGGATaGCAGGATTGCCTGGAGGGCCTTGGTGGCCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LQMKQHQPECQG*QDCLEGLGGQV Trigger: CACCTGGCCACCAAGGCCCTCCAGGCAATCCTGGCATCCCTGGCACTCCGGCTGATGCTGTTTCATTTGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 72 bp | CAGACCTCGAGGACCCTGAATACCTGGCTCTCCGGCTaGTCCTTGGGAGCCTGTTCTACCAGGGATTCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: QTSRTLNTWLSG*SLGACSTRDSY Trigger: GTAGGAATCCCTGGTAGAACAGGCTCCCAAGGACCAGCCGGAGAGCCAGGTATTCAGGGTCCTCGAGGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | TCGAGGACCCTGAATACCTGGCTCTCCGGCTGGTCCTaGGGAGCCTGTTCTACCAGGGATTCCTACACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRTLNTWLSGWS*GACSTRDSYTW Trigger: CCAGGTGTAGGAATCCCTGGTAGAACAGGCTCCCAAGGACCAGCCGGAGAGCCAGGTATTCAGGGTCCTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 90 bp | TATAGCCCCCTTCATGCCCGTAAGACCTGGCTTCCCACGTTCACCTaGAGGGCCTCTGTCTCCTGGAATTCCCTGATCACCGCGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: YSPLHARKTWLPTFT*RASVSWNSLITAFS Trigger: GGAGAACGCGGTGATCAGGGAATTCCAGGAGACAGAGGCCCTCAAGGTGAACGTGGGAAGCCAGGTCTTACGGGCATGAAGGGGGCTATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 72 bp | CGTCTTCCCCTTTGGCCTTCTTTGCCAGGTGGACCCTaGGGACCTTGGATTCCTATGGAGCCAGTTAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLPLWPSLPGGP*GPWIPMEPVKA Trigger: AGCCTTAACTGGCTCCATAGGAATCCAAGGTCCCCAGGGTCCACCTGGCAAAGAAGGCCAAAGGGGAAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | CTTCATGCCCGTAAGACCTGGCTTCCCACGTTCACCTaGAGGGCCTCTGTCTCCTGGAATTCCCTGATCACC | + |
|
Preference number: 6 (lower is better) Translates to: LHARKTWLPTFT*RASVSWNSLIT Trigger: GGTGATCAGGGAATTCCAGGAGACAGAGGCCCTCAAGGTGAACGTGGGAAGCCAGGTCTTACGGGCATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 72 bp | GGGGTCCCTCACTACCCTTGTCACCTTTTGCTCCAGTaGGACCAGGATGTCCAGTTCTTCCTGTTAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GVPHYPCHLLLQ*DQDVQFFLLSQ Trigger: CTGGCTTAACAGGAAGAACTGGACATCCTGGTCCCACTGGAGCAAAAGGTGACAAGGGTAGTGAGGGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | TTACACCAGGAAATCCTTCTAGTCCTGGCAAGCCCATaGCACCAGGCTCTCCCACTGGGCCAGGATCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LHQEILLVLASP*HQALPLGQDHL Trigger: AAGGTGATCCTGGCCCAGTGGGAGAGCCTGGTGCAATGGGCTTGCCAGGACTAGAAGGATTTCCTGGTGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS TCA 72 bp | GAGGACCCGAGTCACCTTTCAAACCATCTTGTCCATTaGGGCCATCCAGACCAGAGTCTCCTTTGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EDPSHLSNHLVH*GHPDQSLLWLL Trigger: CAGGAGCCAAAGGAGACTCTGGTCTGGATGGCCTCAATGGACAAGATGGTTTGAAAGGTGACTCGGGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS TCA 72 bp | ACTTTCCAGGCTCCCCAGTGCTTCCGTCATCGCCTTTaGTGCTTTTCAGCCCAGGGACATTGGCTTGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: TFQAPQCFRHRL*CFSAQGHWLDS Trigger: ACTGTCAAGCCAATGTCCCTGGGCTGAAAAGCATCAAAGGCGATGACGGAAGCACTGGGGAGCCTGGAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 90 bp | GCTTCCGTCATCGCCTTTGATGCTTTTCAGCCCAGGGACATTGGCTaGACAGTTGCCACAGAAGTTCTTCAGCAGGGCTCCAATGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASVIAFDAFQPRDIG*TVATEVLQQGSNVS Trigger: GGAGACATTGGAGCCCTGCTGAAGAACTTCTGTGGCAACTGTCAAGCCAATGTCCCTGGGCTGAAAAGCATCAAAGGCGATGACGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS TCA 72 bp | TCGCCTTTGATGCTTTTCAGCCCAGGGACATTGGCTTaGCAGTTGCCACAGAAGTTCTTCAGCAGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPLMLFSPGTLA*QLPQKFFSRAP Trigger: TGGAGCCCTGCTGAAGAACTTCTGTGGCAACTGTCAAGCCAATGTCCCTGGGCTGAAAAGCATCAAAGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS GCA 72 bp | TGTTTCTGGCTTGTCCCTGACTGTCAGACAGGTACATaGAGGAAGCAGGAAGGTTGTCACCCAGGTCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: CFWLVPDCQTGT*RKQEGCHPGPQ Trigger: TTGTGGACCTGGGTGACAACCTTCCTGCTTCCTGCATGTACCTGTCTGACAGTCAGGGACAAGCCAGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 90 bp | ACAGACCCTGGAAATCCAGGCAGCCCAGTATCGCCCTTTTCTCCTTaGGGGCCACTAGCTCCGTGCTCACCAGTTCCCTTATTGAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: TDPGNPGSPVSPFSP*GPLAPCSPVPLLKY Trigger: ATATTTCAATAAGGGAACTGGTGAGCACGGAGCTAGTGGCCCCAAAGGAGAAAAGGGCGATACTGGGCTGCCTGGATTTCCAGGGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS TCA 72 bp | CCGGCTCTCCTTTGTCGCCCTTATGTCCAATGGATCTaGGAGTTCCTGGTAATCCTGCTTCCTCCTTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PALLCRPYVQWI*EFLVILLPPCL Trigger: CAAACAAGGAGGAAGCAGGATTACCAGGAACTCTCAGATCCATTGGACATAAGGGCGACAAAGGAGAGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | TGGACCTTGAGGACCCGAGTCACCTTTCAAACCATCTaGTCCATTGAGGCCATCCAGACCAGAGTCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: WTLRTRVTFQTI*SIEAIQTRVSF Trigger: AAAGGAGACTCTGGTCTGGATGGCCTCAATGGACAAGATGGTTTGAAAGGTGACTCGGGTCCTCAAGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | CCTTCCACCCGGATCTCCCTTTTCTCCCTTAACGCCTaGTTTTCCTGGAATACCATGTTCTCCTGGCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: PSTRISLFSLNA*FSWNTMFSWQS Trigger: GGATTGCCAGGAGAACATGGTATTCCAGGAAAACAAGGCGTTAAGGGAGAAAAGGGAGATCCGGGTGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS GCA 72 bp | TCACCAGTTCCCTTATTGAAATATCCACCAAAAGGCTaGTGTAGTCCTTGTAACCCAGGAGGTCCGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPVPLLKYPPKG*CSPCNPGGPGG Trigger: ACCACCCGGACCTCCTGGGTTACAAGGACTACAGCAGCCTTTTGGTGGATATTTCAATAAGGGAACTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | TTGGGGCCACTAGCTCCGTGCTCACCAGTTCCCTTATaGAAATATCCACCAAAAGGCTGCTGTAGTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGPLAPCSPVPL*KYPPKGCCSPC Trigger: ACAAGGACTACAGCAGCCTTTTGGTGGATATTTCAATAAGGGAACTGGTGAGCACGGAGCTAGTGGCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 72 bp | CGGATCTCCCTTTTCTCCCTTAACGCCTTGTTTTCCTaGAATACCATGTTCTCCTGGCAATCCAACATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RISLFSLNALFS*NTMFSWQSNIS Trigger: GGAGATGTTGGATTGCCAGGAGAACATGGTATTCCAGGAAAACAAGGCGTTAAGGGAGAAAAGGGAGATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | GACTCGGGATTGCACGCCAATGCCAAGTTTATGCCATaGACGATCAAAGAGTGGACGGAGTTCTCGATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DSGLHANAKFMP*TIKEWTEFSIL Trigger: AAGAATCGAGAACTCCGTCCACTCTTTGATCGTCAATGGCATAAACTTGGCATTGGCGTGCAATCCCGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | ATAGGCCGGGTTCTCCTCTATCTCCCTTTTCACCTTTaGTTAAAGGCTCCCCAGGTTCTCCTTTGTGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: IGRVLLYLPFHL*LKAPQVLLCVL Trigger: AAGGACACAAAGGAGAACCTGGGGAGCCTTTAACAAAAGGTGAAAAGGGAGATAGAGGAGAACCCGGCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS TCA 72 bp | ACTCGGGATTGCACGCCAATGCCAAGTTTATGCCATTaGCGATCAAAGAGTGGACGGAGTTCTCGATTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: TRDCTPMPSLCH*RSKSGRSSRFL Trigger: TAAGAATCGAGAACTCCGTCCACTCTTTGATCGTCAATGGCATAAACTTGGCATTGGCGTGCAATCCCGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS TCA 72 bp | TCTCCCTTGATGCCTTCAAGTCCTTGTTCTCCCTTTTaGCCAGGTAATCCTGGAGTACCATCTAAGCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: SPLMPSSPCSPF*PGNPGVPSKPC Trigger: ACATGGCTTAGATGGTACTCCAGGATTACCTGGTCAAAAGGGAGAACAAGGACTTGAAGGCATCAAGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS GCA 72 bp | CCATATAGAGAGAAAGGACTCGGGATTGCACGCCAATaGCAAGTTTATGCCATTGACGATCAAAGAGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PYREKGLGIARQ*QVYAIDDQRVD Trigger: GTCCACTCTTTGATCGTCAATGGCATAAACTTGGCATTGGCGTGCAATCCCGAGTCCTTTCTCTCTATATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 90 bp | CGTACCCGAAACATGACAGCTATAGCGTATTCCTCTGGAAGGCCTTaGGGAAATATCTTAACAGTGTCTCTGATAAGAAGCACACTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RTRNMTAIAYSSGRP*GNILTVSLIRSTLP Trigger: GGGAAGTGTGCTTCTTATCAGAGACACTGTTAAGATATTTCCCAAAGGCCTTCCAGAGGAATACGCTATAGCTGTCATGTTTCGGGTACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 90 bp | GAGAGAAAGGACTCGGGATTGCACGCCAATGCCAAGTTTATGCCATaGACGATCAAAGAGTGGACGGAGTTCTCGATTCTTAAAAACATA | + |
|
Preference number: 6 (lower is better) Translates to: ERKDSGLHANAKFMP*TIKEWTEFSILKNI Trigger: TATGTTTTTAAGAATCGAGAACTCCGTCCACTCTTTGATCGTCAATGGCATAAACTTGGCATTGGCGTGCAATCCCGAGTCCTTTCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS GCA 72 bp | AACTTGAAACAGGTTTTATCACCTTCGCAAAACGCATaGCTCAGAGCAAAGCTTTCTCCCAGATCAAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: NLKQVLSPSQNA*LRAKLSPRSKP Trigger: AGGCTTTGATCTGGGAGAAAGCTTTGCTCTGAGGCATGCGTTTTGCGAAGGTGATAAAACCTGTTTCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CCA 72 bp | TCGTACCCGAAACATGACAGCTATAGCGTATTCCTCTaGAAGGCCTTTGGGAAATATCTTAACAGTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SYPKHDSYSVFL*KAFGKYLNSVS Trigger: AGAGACACTGTTAAGATATTTCCCAAAGGCCTTCCAGAGGAATACGCTATAGCTGTCATGTTTCGGGTACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | ATGGATCTGAGAGTTCCTGGTAATCCTGCTTCCTCCTaGTTTGGAATACACTGGCATGTGTCTTTAAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: MDLRVPGNPASS*FGIHWHVSLSS Trigger: GGAACTTAAAGACACATGCCAGTGTATTCCAAACAAGGAGGAAGCAGGATTACCAGGAACTCTCAGATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 90 bp | TTATGTCCAATGGATCTGAGAGTTCCTGGTAATCCTGCTTCCTCCTaGTTTGGAATACACTGGCATGTGTCTTTAAGTTCCTGCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LCPMDLRVPGNPASS*FGIHWHVSLSSCFP Trigger: AGGAAAGCAGGAACTTAAAGACACATGCCAGTGTATTCCAAACAAGGAGGAAGCAGGATTACCAGGAACTCTCAGATCCATTGGACATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS TCA 72 bp | AAGTTGGTGAAGTTCGATATCCACAGGTTTGCCATCTaGAGCTCGTGCAGCAATAATTGTCCTTCCTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KLVKFDIHRFAI*SSCSNNCPSLK Trigger: TTTCAAGGAAGGACAATTATTGCTGCACGAGCTTCAGATGGCAAACCTGTGGATATCGAACTTCACCAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 90 bp | GGAAATATCTTAACAGTGTCTCTGATAAGAAGCACACTTCCCAACTaGAAACAGGTTTTATCACCTTCGCAAAACGCATGCCTCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GNILTVSLIRSTLPN*KQVLSPSQNACLRA Trigger: TGCTCTGAGGCATGCGTTTTGCGAAGGTGATAAAACCTGTTTCAAGTTGGGAAGTGTGCTTCTTATCAGAGACACTGTTAAGATATTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
||
| CDS CAA 72 bp | AACATGACAGCTATAGCGTATTCCTCTGGAAGGCCTTaGGGAAATATCTTAACAGTGTCTCTGATAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: NMTAIAYSSGRP*GNILTVSLIRS Trigger: GCTTCTTATCAGAGACACTGTTAAGATATTTCCCAAAGGCCTTCCAGAGGAATACGCTATAGCTGTCATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CAA 90 bp | TCCTTCCTTGAAAATCCACAGAATTCTTTTCTTCCGTGTGTCGACTaGCAATTAAATTGCAATCCATATAGAGAGAAAGGACTCGGGATT | + |
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Preference number: 6 (lower is better) Translates to: SFLENPQNSFLPCVD*QLNCNPYREKGLGI Trigger: AATCCCGAGTCCTTTCTCTCTATATGGATTGCAATTTAATTGCAAGTCGACACACGGAAGAAAAGAATTCTGTGGATTTTCAAGGAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS GCA 72 bp | AATTCTTTTCTTCCGTGTGTCGACTTGCAATTAAATTaGAATCCATATAGAGAGAAAGGACTCGGGATTGCA | + |
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Preference number: 6 (lower is better) Translates to: NSFLPCVDLQLN*NPYREKGLGIA Trigger: TGCAATCCCGAGTCCTTTCTCTCTATATGGATTGCAATTTAATTGCAAGTCGACACACGGAAGAAAAGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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| CDS CCA 72 bp | ACCACCTTCTTCGTACCATCAATCACTACAGATATCTaGGCCATATTCTGCTGGTTTAAAATCTTCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: TTFFVPSITTDI*AIFCWFKIFHK Trigger: TTTATGGAAGATTTTAAACCAGCAGAATATGGCCCAGATATCTGTAGTGATTGATGGTACGAAGAAGGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051344.6 ENSMUST00000115244.9 |
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