Pregenerated sensors for COL10A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039462Ensembl transcript IDs: ENSMUST00000105511.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GAAGTGAGGAAACTTGGTCCCAGAGTGCACTTTAGAAAGTGTAAGTaGTTCACATTACTTTTAGCCTACCTCCAAATGCATCTCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: EVRKLGPRVHFRKCK*FTLLLAYLQMHLQG Trigger: TCCCTGGAGATGCATTTGGAGGTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACCAAGTTTCCTCACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| 3UTR CCA 72 bp | AGCCTACCTCCAAATGCATCTCCAGGGAGGGCGCGATaGAATTGGGTGGAAAGCCTTTCTAAGCGGAGAATA | + |
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Preference number: 3 (lower is better) Translates to: SLPPNASPGRAR*NWVESLSKRRI Trigger: TATTCTCCGCTTAGAAAGGCTTTCCACCCAATTCCATCGCGCCCTCCCTGGAGATGCATTTGGAGGTAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATGGGTTGTATGAGCCATaGAGTGATGCACCATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LFVSSLMFKPLMFILPLDGLYEP*SDAPSE Trigger: TTCTGATGGTGCATCACTCAATGGCTCATACAACCC...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| 3UTR TCA 72 bp | TGCGCACTTCAAAAACCATGTGTGTACCTGTGCATTTaGATTTATCTTGATGAAAGGGGTTGTATGAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: CALQKPCVYLCI*IYLDERGCMSH Trigger: ATGGCTCATACAACCCCTTTCATCAAGATAAATTCAAATGCACAGGTACACACATGGTTTTTGAAGTGCGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| 3UTR TCA 72 bp | CCAGGTATGTGGACTTTCTGCAATTGCAGAAAAGCTTaGAACAGCTGTGACAAAGCACCTTATAATCGAAAT | + |
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Preference number: 3 (lower is better) Translates to: PGMWTFCNCRKA*NSCDKAPYNRN Trigger: ATTTCGATTATAAGGTGCTTTGTCACAGCTGTTTCAAGCTTTTCTGCAATTGCAGAAAGTCCACATACCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTCACATTACTTTTAGCCTACCTCCAAATGCATCTCCAGGGAGGGCGCGATTCCCGGGAGGACCTTaGGGACCTGGTGGACCTGAT | + |
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Preference number: 4 (lower is better) Translates to: VVHITFSLPPNASPGRARFPGGP*GPGGPD Trigger: ATCAGGTCCACCAGGTCCCCAAGGTCCTCCCGGGAA...TCGCGCCCTCCCTGGAGATGCATTTGGAGGTAGGCTAAAAGTAATGTGAACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTCACATTACTTTTAGCCTACCTCCAAATGCATCTCCAGGGAGGGCGCGATATGCCAGCTGGGCCTaGAGCACCTGGGTTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VVHITFSLPPNASPGRARYASWA*STWVSR Trigger: CCTGGAAACCCAGGTGCTCCAGGCCCAGCTGGCATA...TCGCGCCCTCCCTGGAGATGCATTTGGAGGTAGGCTAAAAGTAATGTGAACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTCACATTACTTTTAGCCTACCTCCAAATGCATCTCCAGGGAGGGCGCGACCAGGTTCTCCACTGTaGCCTCTTGGACCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VVHITFSLPPNASPGRARPGSPL*PLGPGG Trigger: CCCTCCTGGTCCAAGAGGCCACAGTGGAGAACCTGG...TCGCGCCCTCCCTGGAGATGCATTTGGAGGTAGGCTAAAAGTAATGTGAACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTACTGACATAAGTCAGACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTTTGCCTGGCGGGCCTaGCAGGCCTGGCTTCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: VTDISQTLVSKLHQVCGLFAWRA*QAWLPR Trigger: ACGGGGAAGCCAGGCCTGCCAGGCCCGCCAGGCAAA...AAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTCTGACTTATGTCAGTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTCACATTACTTTTAGCCTACCTCCAAATGCATCTCCAGGGAGGGCGCGACACAGAAATTCCAGCTaGGCCAGGAATTCCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: VVHITFSLPPNASPGRARHRNSS*ARNSRG Trigger: CCCCCTGGAATTCCTGGCCCAGCTGGAATTTCTGTG...TCGCGCCCTCCCTGGAGATGCATTTGGAGGTAGGCTAAAAGTAATGTGAACAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR GCA 90 bp | GTTGTTCACATTACTTTTAGCCTACCTCCAAATGCATCTCCAGGGAGGGCGCGAGATGGGGGCACCTACTaGTGGGTAAGCTTTAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: VVHITFSLPPNASPGRARDGGTY*WVSFRE Trigger: CTCTCTAAAGCTTACCCAGCAGTAGGTGCCCCCATC...TCGCGCCCTCCCTGGAGATGCATTTGGAGGTAGGCTAAAAGTAATGTGAACAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR TCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACGGTCCTATGGGACCTTaGGGGCCTGGAAGACCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYGPMGP*GPGRPL Trigger: GAGGGGTCTTCCAGGCCCTCAAGGTCCCATAGGACC...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCAATTCCAGGGGGCCCTaGAGGGCCCCGAGGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: CLFVSSLMFKPLMFILPLNSRGP*RAPRSG Trigger: CCCGGACCTCGGGGCCCTCCAGGGCCCCCTGGAATT...GAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTACTGACATAAGTCAGACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTGGGACCTTGAGGGCCTaGAAGACCCCTCTCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: VTDISQTLVSKLHQVCGLGTLRA*KTPLTW Trigger: CCAGGTGAGAGGGGTCTTCCAGGCCCTCAAGGTCCC...AAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTCTGACTTATGTCAGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACTCCACTGTGGCCTCTTaGACCAGGAGGGCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYSTVAS*TRRAWR Trigger: CCTCCAGGCCCTCCTGGTCCAAGAGGCCACAGTGGA...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACGGGACCCGGAGGACCTaGGAGACCAGGTTCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYGTRRT*ETRFST Trigger: AGTGGAGAACCTGGTCTCCCAGGTCCTCCGGGTCCC...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR TCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACAACCCCGGTCACCTTTaGTGCCCGGCTGTCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYNPGHL*CPAVLE Trigger: TTCCAGGACAGCCGGGCATCAAAGGTGACCGGGGTT...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR TCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACGGGACCTGGTGGACCTaGTGGTCCCATTTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYGTWWT*WSHFSW Trigger: CCAGGAGAAATGGGACCATCAGGTCCACCAGGTCCC...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAATCCTCGAGGTCCGGTTaGGCCTGGTGGACCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKSSRSG*AWWTRN Trigger: ATTCCTGGTCCACCAGGCCCAACCGGACCTCGAGGA...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAATGGTCCTGGCAACCCTaGCTCTCCTTGGAGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKWSWQP*LSLESR Trigger: CCTGGACTCCAAGGAGAGCCAGGGTTGCCAGGACCA...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTACTGACATAAGTCAGACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTGGCCTGGCTTCCCCGTaGCTGATATTCCTGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: VTDISQTLVSKLHQVCGLGLASP*LIFLVV Trigger: GACCACCAGGAATATCAGCCACGGGGAAGCCAGGCC...AAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTCTGACTTATGTCAGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAATCCAGGATGACCTGCTaGCCCTCGTTCCCCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKSRMTC*PSFPFG Trigger: GCCAAAGGGGAACGAGGGCCAGCAGGTCATCCTGGA...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACGCCCAGTGGGGCCCCTaGTACCTGGTATTCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYAQWGP*YLVFQV Trigger: AACCTGGAATACCAGGTACCAGGGGCCCCACTGGGC...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTACTGACATAAGTCAGACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCCGGTTGGGCCTGGTaGACCAGGAATGCCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VTDISQTLVSKLHQVCGLSGWAW*TRNALF Trigger: GAACAAGGCATTCCTGGTCCACCAGGCCCAACCGGA...AAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTCTGACTTATGTCAGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GAAGTGAGGAAACTTGGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACAGATGCCCGGCTGTCCTaGAAAGCCGTTTTCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: EVRKLGPRVHFRKCKLFTDARLS*KAVFTS Trigger: AGAGGTGAAAACGGCTTTCCAGGACAGCCGGGCATC...TGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACCAAGTTTCCTCACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACCCTGGAGCCCCTGGGTaGCCTTTTTCTCCTGGGATA | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYPGAPG*PFSPGI Trigger: TATCCCAGGAGAAAAAGGCCACCCAGGGGCTCCAGG...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATGAATCCTGGGACACCTaGTGGCCCAGTGGGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDESWDT*WPSGAP Trigger: AGGGGCCCCACTGGGCCACCAGGTGTCCCAGGATTC...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACAGATCCAGGGAATCCTaGGACACCTGGTGGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYRSRES*DTWWPS Trigger: ACTGGGCCACCAGGTGTCCCAGGATTCCCTGGATCT...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACAGTTGCTATGCCAGCTaGGCCTGGAGCACCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYSCYAS*AWSTWV Trigger: AACCCAGGTGCTCCAGGCCCAGCTGGCATAGCAACT...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTCACATTACTTTTAGCCTACCTCCAAATGCATCTCCAGGGAGGGCGCGATCTGCATTGGGCAATTaGAGCCATACCTGGTCATTT | + |
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Preference number: 4 (lower is better) Translates to: VVHITFSLPPNASPGRARSALGN*SHTWSF Trigger: AAATGACCAGGTATGGCTCCAATTGCCCAATGCAGA...TCGCGCCCTCCCTGGAGATGCATTTGGAGGTAGGCTAAAAGTAATGTGAACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR TCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACAGGCCTACCCAAACGTaGGTCCCTTTCACATGCACG | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYRPTQT*VPFTCT Trigger: CGTGCATGTGAAAGGGACTCACGTTTGGGTAGGCCT...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR TCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACCATGATTGCACTCCCTaGAGCCTGATCCAGGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYHDCTP*SLIQVA Trigger: GGCTACCTGGATCAGGCTTCAGGGAGTGCAATCATG...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GTTACTGACATAAGTCAGACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTGGCCCTTTATGCCTGTaGGCGTTTGGTACCGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VTDISQTLVSKLHQVCGLGPLCL*AFGTVQ Trigger: CTGAACGGTACCAAACGCCCACAGGCATAAAGGGCC...AAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTCTGACTTATGTCAGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACTATTCCTGGTGGTCCTaGCAACCCTGGCTCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYYSWWS*QPWLSL Trigger: CAAGGAGAGCCAGGGTTGCCAGGACCACCAGGAATA...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GAAGTGAGGAAACTTGGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATGGTCCCATTTCTCCTaGGAAACCCCGGTCACCTTT | + |
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Preference number: 4 (lower is better) Translates to: EVRKLGPRVHFRKCKLFTWSHFS*ETPVTF Trigger: AAAGGTGACCGGGGTTTCCCAGGAGAAATGGGACCA...TGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACCAAGTTTCCTCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAAGTGGCCTTTTTCTCCTaGGATACCTGGCTGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKVAFFS*DTWLTR Trigger: CCTGGTCAGCCAGGTATCCCAGGAGAAAAAGGCCAC...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGCCCTCGTTCCCCTTTaGCACCTGGAGCCCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: CLFVSSLMFKPLMFILPLALVPL*HLEPQE Trigger: TTCCTGGGGCTCCAGGTGCCAAAGGGGAACGAGGGC...GAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GAAGTGAGGAAACTTGGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACAATACCTGTTACCCCGTaGTTAGCACTGACAAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: EVRKLGPRVHFRKCKLFTIPVTP*LALTSG Trigger: GCCGCTTGTCAGTGCTAACCACGGGGTAACAGGTAT...TGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACCAAGTTTCCTCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR GCA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAATTCACCTCTTGGACCTaGCTCACCATTGTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKFTSWT*LTIVSR Trigger: CCTGGACACAATGGTGAGGCAGGTCCAAGAGGTGAA...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACGGATCCAATGGCTCCTaGCTTCCCAATACCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYGSNGS*LPNTFS Trigger: CGAGAAGGTATTGGGAAGCCAGGAGCCATTGGATCC...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAAGCGCCTGGAATGCCATaGTTCCCTGGGATTCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKAPGMP*FPGIPL Trigger: TAAAGGAATCCCAGGGAACCATGGCATTCCAGGCGC...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | GAAGTGAGGAAACTTGGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACAGGGGGCACCTACTGCTaGGTAAGCTTTAGAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: EVRKLGPRVHFRKCKLFTGGTYC*VSFREN Trigger: ATTCTCTCTAAAGCTTACCCAGCAGTAGGTGCCCCC...TGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACCAAGTTTCCTCACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR GCA 90 bp | GTTACTGACATAAGTCAGACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTCTGGTGGACCAGGAATaGCTTGTTCTCCTCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: VTDISQTLVSKLHQVCGLLVDQE*LVLLLL Trigger: CAGTAAGAGGAGAACAAGGCATTCCTGGTCCACCAG...AAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTCTGACTTATGTCAGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR GCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATCCTGGGCCTCTGGCCTaGCTTTATGAAGCCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDPGPLA*LYEAIR Trigger: CCTGATGGCTTCATAAAGGCAGGCCAGAGGCCCAGG...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCAAGACCCCTCTCACCTaGACGGCCAGGAGAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: CLFVSSLMFKPLMFILPLKTPLT*TARRAI Trigger: TATGGCTCTCCTGGCCGTCCAGGTGAGAGGGGTCTT...GAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR GCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATGCACCTGTAAGTCCCTaGTGTCCAGGTTTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDAPVSP*CPGFPG Trigger: GCCAGGAAAACCTGGACAGCAGGGACTTACAGGTGC...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATATTGAGGCCCTTAGTTaGTATGCCAGCTGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDIEALS*YASWAW Trigger: CCAGGCCCAGCTGGCATAGCAACTAAGGGCCTCAAT...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTTCACATTACTTTTAGCCTACCTCCAAATGCATCTCCAGGGAGGGCGCGATTGTTCTCCTCTTACTaGAATCCCTTTACTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VVHITFSLPPNASPGRARLFSSY*NPFTLY Trigger: ATAAAGAGTAAAGGGATTCCAGTAAGAGGAGAACAA...TCGCGCCCTCCCTGGAGATGCATTTGGAGGTAGGCTAAAAGTAATGTGAACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACTCCTTTGTGTCCATATaGTCCTCTCTCCCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYSFVSI*SSLPWF Trigger: AAACCAGGGGAGAGAGGACCATATGGACACAAAGGA...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGACCAGGGGATCCAATaGCTCCTGGCTTCCCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: CLFVSSLMFKPLMFILPLDQGIQ*LLASQY Trigger: GTATTGGGAAGCCAGGAGCCATTGGATCCCCTGGTC...GAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCAAAGCCAGGAGCTCCTaGAGGACCAGCTATTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFVSSLMFKPLMFILPLKARSS*RTSYSW Trigger: CCAGGAATAGCTGGTCCTCCAGGAGCTCCTGGCTTT...GAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATAGGACCATTGAGACCTaGCTCCCCAGGATACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDRTIET*LPRIPC Trigger: ACAGGGTATCCTGGGGAGCCAGGTCTCAATGGTCCT...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATTCCAGGTTCACCTCTTaGACCTGCCTCACCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDSRFTS*TCLTIV Trigger: CACAATGGTGAGGCAGGTCCAAGAGGTGAACCTGGA...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATGGAGTAGAGGCCGTTTaGTTCTGCATTGGGCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDGVEAV*FCIGQL Trigger: CAATTGCCCAATGCAGAATCAAACGGCCTCTACTCC...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATAATGCCATGGTTCCCTaGGATTCCTTTAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDNAMVP*DSFRSL Trigger: CAAGGACCTAAAGGAATCCCAGGGAACCATGGCATT...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATTTGTCCCCTCAAACCTaGCAAGCCTTGTTTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDLSPQT*QALFSK Trigger: TTTGGAAAACAAGGCTTGCCAGGTTTGAGGGGACAA...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATACTCTTTATGGCGTATaGGATGAAGTATTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDTLYGV*DEVLCL Trigger: AAGACACAATACTTCATCCCATACGCCATAAAGAGT...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATGAAATAGTATATGCCTaGGATCTTACAGGTAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSLMFKPLMFILPLDEIVYA*DLTGKD Trigger: ATCTTTACCTGTAAGATCCCAGGCATATACTATTTC...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS TCA 90 bp | TCCTTGGAGTCCAGGACTTCCATAGCCTGGCTTGCCTGGCGGTCCTaGGGGACCTGGGTGTCCTCGAGGTCCGGTTGGGCCTGGTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SLESRTSIAWLAWRS*GTWVSSRSGWAWWT Trigger: GGTCCACCAGGCCCAACCGGACCTCGAGGACACCCAGGTCCCTCAGGACCGCCAGGCAAGCCAGGCTATGGAAGTCCTGGACTCCAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS GCA 90 bp | GCAACCCTGGCTCTCCTTGGAGTCCAGGACTTCCATAGCCTGGCTTaGCTGGCGGTCCTGAGGGACCTGGGTGTCCTCGAGGTCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATLALLGVQDFHSLA*LAVLRDLGVLEVRL Trigger: CAACCGGACCTCGAGGACACCCAGGTCCCTCAGGACCGCCAGGCAAGCCAGGCTATGGAAGTCCTGGACTCCAAGGAGAGCCAGGGTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS CCA 90 bp | ACCAGTGGGCCCATTGAGGCCCTTAGTTGCTATGCCAGCTGGGCCTaGAGCACCTGGGTTTCCAGGGTCACCCTTAGATCCAGGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: TSGPIEALSCYASWA*STWVSRVTLRSRES Trigger: GGATTCCCTGGATCTAAGGGTGACCCTGGAAACCCAGGTGCTCCAGGCCCAGCTGGCATAGCAACTAAGGGCCTCAATGGGCCCACTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS CCA 90 bp | TGGCCCAGTGGGGCCCCTGGTACCTGGTATTCCAGGTTCACCTCTTaGACCTGCCTCACCATTGTGTCCAGGCACTCCTTTAGCTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: WPSGAPGTWYSRFTS*TCLTIVSRHSFSSY Trigger: GTAGGAGCTAAAGGAGTGCCTGGACACAATGGTGAGGCAGGTCCAAGAGGTGAACCTGGAATACCAGGTACCAGGGGCCCCACTGGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTTCACATTACTTTTAGCCTACCTCCAAATGCATCTCCAGGGAGGGCGCGAGGCCCTCGTTCCCCTTaGGCACCTGGAGCCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVHITFSLPPNASPGRARGPRSP*APGAPG Trigger: TCCTGGGGCTCCAGGTGCCAAAGGGGAACGAGGGCC...TCGCGCCCTCCCTGGAGATGCATTTGGAGGTAGGCTAAAAGTAATGTGAACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS TCA 90 bp | GTGGACCTGATGGTCCCATTTCTCCTGGGAAACCCCGGTCACCTTTaGTGCCCGGCTGTCCTGGAAAGCCGTTTTCACCTCTTCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VDLMVPFLLGNPGHL*CPAVLESRFHLFFP Trigger: TGGGAAGAAGAGGTGAAAACGGCTTTCCAGGACAGCCGGGCATCAAAGGTGACCGGGGTTTCCCAGGAGAAATGGGACCATCAGGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS CCA 90 bp | TTTTTCTCCTGGGATACCTGGCTGACCAGGGGATCCAATGGCTCCTaGCTTCCCAATACCTTCTCGTCCTTGCTTCCCGGGAGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FFSWDTWLTRGSNGS*LPNTFSSLLPGRTL Trigger: CAAGGTCCTCCCGGGAAGCAAGGACGAGAAGGTATTGGGAAGCCAGGAGCCATTGGATCCCCTGGTCAGCCAGGTATCCCAGGAGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS GCA 90 bp | GACCTGGGTGTCCTCGAGGTCCGGTTGGGCCTGGTGGACCAGGAATaGCTTGTTCTCCTCTTACTGGAATCCCTTTACTCTTTATGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: DLGVLEVRLGLVDQE*LVLLLLESLYSLWR Trigger: ACGCCATAAAGAGTAAAGGGATTCCAGTAAGAGGAGAACAAGGCATTCCTGGTCCACCAGGCCCAACCGGACCTCGAGGACACCCAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS CCA 90 bp | GAGAGAATGACAGTAAAAGCAGACACGGGCATACCTGTTACCCCGTaGTTAGCACTGACAAGCGGCATCCCAGAAAGCCTGGGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ERMTVKADTGIPVTP*LALTSGIPESLGLW Trigger: CCAGAGGCCCAGGCTTTCTGGGATGCCGCTTGTCAGTGCTAACCACGGGGTAACAGGTATGCCCGTGTCTGCTTTTACTGTCATTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 90 bp | GCAGGCCCAACTAGACCTATCTCACCTTTAGCGCCTGGAATGCCATaGTTCCCTGGGATTCCTTTAGGTCCTTGGGGTCCCATATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGPTRPISPLAPGMP*FPGIPLGPWGPIFP Trigger: TGGGAATATGGGACCCCAAGGACCTAAAGGAATCCCAGGGAACCATGGCATTCCAGGCGCTAAAGGTGAGATAGGTCTAGTTGGGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCCCTCTCTCCCCTGGTTaGCCTGGCGGGCCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLFVSSLMFKPLMFILPLPLSPG*PGGPGR Trigger: CCTGCCAGGCCCGCCAGGCAAACCAGGGGAGAGAGG...GAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CAA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAAGGGTCCTATGGGACCTaGAGGGCCTGGAAGACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKGSYGT*RAWKTP Trigger: AGGGGTCTTCCAGGCCCTCAAGGTCCCATAGGACCC...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 90 bp | CTTTATGGCGTATGGGATGAAGTATTGTGTCTTGGGGCTAGCAAGTaGGCCCTTTATGCCTGTGGGCGTTTGGTACCGTTCAGCATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LYGVWDEVLCLGASK*ALYACGRLVPFSIK Trigger: TTTTATGCTGAACGGTACCAAACGCCCACAGGCATAAAGGGCCCACTTGCTAGCCCCAAGACACAATACTTCATCCCATACGCCATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CAA 90 bp | GAAGTGAGGAAACTTGGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACAGGACCAGTGGGCCCATaGAGGCCCTTAGTTGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: EVRKLGPRVHFRKCKLFTGPVGP*RPLVAM Trigger: CATAGCAACTAAGGGCCTCAATGGGCCCACTGGTCC...TGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACCAAGTTTCCTCACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 90 bp | TCTTGGGTCGTAATGCTGCTGCCTATTGTACAGAATCTCATCAAATaGGATGGGGGCACCTACTGCTGGGTAAGCTTTAGAGAGAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWVVMLLPIVQNLIK*DGGTYCWVSFREND Trigger: GTCATTCTCTCTAAAGCTTACCCAGCAGTAGGTGCCCCCATCCCATTTGATGAGATTCTGTACAATAGGCAGCAGCATTACGACCCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CAA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATGTCCTCGAGGTCCGGTaGGGCCTGGTGGACCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFVSSLMFKPLMFILPLDVLEVR*GLVDQE Trigger: TTCCTGGTCCACCAGGCCCAACCGGACCTCGAGGAC...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 90 bp | GCCTTGTTCTCCTCTTACTGGAATCCCTTTACTCTTTATGGCGTATaGGATGAAGTATTGTGTCTTGGGGCTAGCAAGTGGGCCCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: ALFSSYWNPFTLYGV*DEVLCLGASKWALY Trigger: ATAAAGGGCCCACTTGCTAGCCCCAAGACACAATACTTCATCCCATACGCCATAAAGAGTAAAGGGATTCCAGTAAGAGGAGAACAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 90 bp | CCTATTGTACAGAATCTCATCAAATGGGATGGGGGCACCTACTGCTaGGTAAGCTTTAGAGAGAATGACAGTAAAAGCAGACACGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PIVQNLIKWDGGTYC*VSFRENDSKSRHGH Trigger: ATGCCCGTGTCTGCTTTTACTGTCATTCTCTCTAAAGCTTACCCAGCAGTAGGTGCCCCCATCCCATTTGATGAGATTCTGTACAATAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CAA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAACAACCCTGGCTCTCCTaGGAGTCCAGGACTTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKQPWLS*ESRTSI Trigger: TATGGAAGTCCTGGACTCCAAGGAGAGCCAGGGTTG...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CAA 90 bp | GGTCCCAGAGTGCACTTTAGAAAGTGTAAGTTGTTCACATTACTTTTAGCCTACAATACCTTCTCGTCCTaGCTTCCCGGGAGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPRVHFRKCKLFTLLLAYNTFSS*LPGRTL Trigger: CAAGGTCCTCCCGGGAAGCAAGGACGAGAAGGTATT...GTAGGCTAAAAGTAATGTGAACAACTTACACTTTCTAAAGTGCACTCTGGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 90 bp | GTGAGTCCCTTTCACATGCACGTGGTAGGAGAAATAGTATATGCCTaGGATCTTACAGGTAAAGATACCAGATCTTGGGTCGTAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSPFHMHVVGEIVYA*DLTGKDTRSWVVML Trigger: CAGCATTACGACCCAAGATCTGGTATCTTTACCTGTAAGATCCCAGGCATATACTATTTCTCCTACCACGTGCATGTGAAAGGGACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CAA 90 bp | GTTACTGACATAAGTCAGACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTATGAAGTATTGTGTCTaGGGGCTAGCAAGTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTDISQTLVSKLHQVCGLMKYCV*GLASGP Trigger: GGGCCCACTTGCTAGCCCCAAGACACAATACTTCAT...AAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTCTGACTTATGTCAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCAAACCCCGGTCACCTTaGATGCCCGGCTGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLFVSSLMFKPLMFILPLKPRSP*MPGCPG Trigger: TCCAGGACAGCCGGGCATCAAAGGTGACCGGGGTTT...GAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCACCAGCAGGTCCCCTTaGTCCCCTCAAACCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLFVSSLMFKPLMFILPLTSRSP*SPQTWQ Trigger: TTGCCAGGTTTGAGGGGACAAAGGGGACCTGCTGGT...GAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CAA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAATATGCCTGTGGGCGTTaGGTACCGTTCAGCATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKYACGR*VPFSIK Trigger: TTTTATGCTGAACGGTACCAAACGCCCACAGGCATA...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATTTACCCTTAGGACCATaGAGACCTGGCTCCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFVSSLMFKPLMFILPLDLPLGP*RPGSPG Trigger: TCCTGGGGAGCCAGGTCTCAATGGTCCTAAGGGTAA...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CAA 90 bp | GACACTTGTTTCCAAGTTACACCAGGTATGTGGACTTTCTGCAATTGCAGAAAATTCTGCATTGGGCAATaGGAGCCATACCTGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: DTCFQVTPGMWTFCNCRKFCIGQ*EPYLVI Trigger: AATGACCAGGTATGGCTCCAATTGCCCAATGCAGAA...TTTTCTGCAATTGCAGAAAGTCCACATACCTGGTGTAACTTGGAAACAAGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCTTCCAGGTTCACCTCTaGGACCTGCCTCACCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLFVSSLMFKPLMFILPLFQVHL*DLPHHC Trigger: ACAATGGTGAGGCAGGTCCAAGAGGTGAACCTGGAA...GAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS CCA 90 bp | GAAATAGTATATGCCTGGGATCTTACAGGTAAAGATACCAGATCTTaGGTCGTAATGCTGCTGCCTATTGTACAGAATCTCATCAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: EIVYAWDLTGKDTRS*VVMLLPIVQNLIKW Trigger: CCATTTGATGAGATTCTGTACAATAGGCAGCAGCATTACGACCCAAGATCTGGTATCTTTACCTGTAAGATCCCAGGCATATACTATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTCGTTTCTAGTCTGATGTTCAAACCCTTAATGTTTATTCTTCCACTCGATGGGCCAATATCTCCTTaGTGTCCATATGGTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFVSSLMFKPLMFILPLDGPISP*CPYGPL Trigger: GAGAGGACCATATGGACACAAAGGAGATATTGGCCC...ATCGAGTGGAAGAATAAACATTAAGGGTTTGAACATCAGACTAGAAACGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS CAA 72 bp | GCGGTCCTGAGGGACCTGGGTGTCCTCGAGGTCCGGTaGGGCCTGGTGGACCAGGAATGCCTTGTTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVLRDLGVLEVR*GLVDQECLVLL Trigger: GAGGAGAACAAGGCATTCCTGGTCCACCAGGCCCAACCGGACCTCGAGGACACCCAGGTCCCTCAGGACCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS GCA 72 bp | GCTCTCCTTGGAGTCCAGGACTTCCATAGCCTGGCTTaGCTGGCGGTCCTGAGGGACCTGGGTGTCCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALLGVQDFHSLA*LAVLRDLGVLE Trigger: CTCGAGGACACCCAGGTCCCTCAGGACCGCCAGGCAAGCCAGGCTATGGAAGTCCTGGACTCCAAGGAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS CAA 90 bp | GCTTGCCTGGCGGTCCTGAGGGACCTGGGTGTCCTCGAGGTCCGGTaGGGCCTGGTGGACCAGGAATGCCTTGTTCTCCTCTTACTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ACLAVLRDLGVLEVR*GLVDQECLVLLLLE Trigger: TTCCAGTAAGAGGAGAACAAGGCATTCCTGGTCCACCAGGCCCAACCGGACCTCGAGGACACCCAGGTCCCTCAGGACCGCCAGGCAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
||
| CDS GCA 72 bp | GACAAGCGGCATCCCAGAAAGCCTGGGCCTCTGGCCTaGCTTTATGAAGCCATCAGGCATGACTGCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: DKRHPRKPGPLA*LYEAIRHDCLA Trigger: GGCCAAGCAGTCATGCCTGATGGCTTCATAAAGGCAGGCCAGAGGCCCAGGCTTTCTGGGATGCCGCTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | TGGGATACCTGGCTGACCAGGGGATCCAATGGCTCCTaGCTTCCCAATACCTTCTCGTCCTTGCTTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: WDTWLTRGSNGS*LPNTFSSLLPG Trigger: CCCGGGAAGCAAGGACGAGAAGGTATTGGGAAGCCAGGAGCCATTGGATCCCCTGGTCAGCCAGGTATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | CCCATTGAGGCCCTTAGTTGCTATGCCAGCTGGGCCTaGAGCACCTGGGTTTCCAGGGTCACCCTTAGATCC | + |
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Preference number: 6 (lower is better) Translates to: PIEALSCYASWA*STWVSRVTLRS Trigger: GGATCTAAGGGTGACCCTGGAAACCCAGGTGCTCCAGGCCCAGCTGGCATAGCAACTAAGGGCCTCAATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CAA 90 bp | TTTAGCGCCTGGAATGCCATGGTTCCCTGGGATTCCTTTAGGTCCTaGGGGTCCCATATTCCCAGGGGATCCAGGCAGACCCGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSAWNAMVPWDSFRS*GSHIPRGSRQTRFS Trigger: GGAGAACCGGGTCTGCCTGGATCCCCTGGGAATATGGGACCCCAAGGACCTAAAGGAATCCCAGGGAACCATGGCATTCCAGGCGCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | TTGTGCACCCTTCTCTCCAGGAAAGCCCCTAGGTCCTaGGGCACCTGTAAGTCCCTGCTGTCCAGGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LCTLLSRKAPRS*GTCKSLLSRFS Trigger: GGAAAACCTGGACAGCAGGGACTTACAGGTGCCCCAGGACCTAGGGGCTTTCCTGGAGAGAAGGGTGCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CAA 72 bp | TGGGGCCCCTGGTACCTGGTATTCCAGGTTCACCTCTaGGACCTGCCTCACCATTGTGTCCAGGCACTCCTT | + |
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Preference number: 6 (lower is better) Translates to: WGPWYLVFQVHL*DLPHHCVQALL Trigger: AAGGAGTGCCTGGACACAATGGTGAGGCAGGTCCAAGAGGTGAACCTGGAATACCAGGTACCAGGGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS TCA 72 bp | ATGGTCCCATTTCTCCTGGGAAACCCCGGTCACCTTTaGTGCCCGGCTGTCCTGGAAAGCCGTTTTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: MVPFLLGNPGHL*CPAVLESRFHL Trigger: GAGGTGAAAACGGCTTTCCAGGACAGCCGGGCATCAAAGGTGACCGGGGTTTCCCAGGAGAAATGGGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | TGGGGCACCTGTAAGTCCCTGCTGTCCAGGTTTTCCTaGCACAGAAATTCCAGCTGGGCCAGGAATTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WGTCKSLLSRFS*HRNSSWARNSR Trigger: CCTGGAATTCCTGGCCCAGCTGGAATTTCTGTGCCAGGAAAACCTGGACAGCAGGGACTTACAGGTGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | TGGGAAACCCCGGTCACCTTTGATGCCCGGCTGTCCTaGAAAGCCGTTTTCACCTCTTCTTCCCACTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: WETPVTFDARLS*KAVFTSSSHSR Trigger: TCTGGAGTGGGAAGAAGAGGTGAAAACGGCTTTCCAGGACAGCCGGGCATCAAAGGTGACCGGGGTTTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS GCA 72 bp | GTCCTCGAGGTCCGGTTGGGCCTGGTGGACCAGGAATaGCTTGTTCTCCTCTTACTGGAATCCCTTTACTCT | + |
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Preference number: 6 (lower is better) Translates to: VLEVRLGLVDQE*LVLLLLESLYS Trigger: AGAGTAAAGGGATTCCAGTAAGAGGAGAACAAGGCATTCCTGGTCCACCAGGCCCAACCGGACCTCGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CAA 90 bp | TGGGTGTCCTCGAGGTCCGGTTGGGCCTGGTGGACCAGGAATGCCTaGTTCTCCTCTTACTGGAATCCCTTTACTCTTTATGGCGTATGG | + |
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Preference number: 6 (lower is better) Translates to: WVSSRSGWAWWTRNA*FSSYWNPFTLYGVW Trigger: CCATACGCCATAAAGAGTAAAGGGATTCCAGTAAGAGGAGAACAAGGCATTCCTGGTCCACCAGGCCCAACCGGACCTCGAGGACACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | ACTAGACCTATCTCACCTTTAGCGCCTGGAATGCCATaGTTCCCTGGGATTCCTTTAGGTCCTTGGGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: TRPISPLAPGMP*FPGIPLGPWGP Trigger: GGGACCCCAAGGACCTAAAGGAATCCCAGGGAACCATGGCATTCCAGGCGCTAAAGGTGAGATAGGTCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | ACAGTAAAAGCAGACACGGGCATACCTGTTACCCCGTaGTTAGCACTGACAAGCGGCATCCCAGAAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TVKADTGIPVTP*LALTSGIPESL Trigger: CAGGCTTTCTGGGATGCCGCTTGTCAGTGCTAACCACGGGGTAACAGGTATGCCCGTGTCTGCTTTTACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | GTATGGGATGAAGTATTGTGTCTTGGGGCTAGCAAGTaGGCCCTTTATGCCTGTGGGCGTTTGGTACCGTTC | + |
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Preference number: 6 (lower is better) Translates to: VWDEVLCLGASK*ALYACGRLVPF Trigger: GAACGGTACCAAACGCCCACAGGCATAAAGGGCCCACTTGCTAGCCCCAAGACACAATACTTCATCCCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CAA 90 bp | GGAATCCCTTTACTCTTTATGGCGTATGGGATGAAGTATTGTGTCTaGGGGCTAGCAAGTGGGCCCTTTATGCCTGTGGGCGTTTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: GIPLLFMAYGMKYCV*GLASGPFMPVGVWY Trigger: GTACCAAACGCCCACAGGCATAAAGGGCCCACTTGCTAGCCCCAAGACACAATACTTCATCCCATACGCCATAAAGAGTAAAGGGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CAA 72 bp | TTACTCTTTATGGCGTATGGGATGAAGTATTGTGTCTaGGGGCTAGCAAGTGGGCCCTTTATGCCTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LLFMAYGMKYCV*GLASGPFMPVG Trigger: GCCCACAGGCATAAAGGGCCCACTTGCTAGCCCCAAGACACAATACTTCATCCCATACGCCATAAAGAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CAA 90 bp | TCTTACTGGAATCCCTTTACTCTTTATGGCGTATGGGATGAAGTATaGTGTCTTGGGGCTAGCAAGTGGGCCCTTTATGCCTGTGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: SYWNPFTLYGVWDEV*CLGASKWALYACGR Trigger: ACGCCCACAGGCATAAAGGGCCCACTTGCTAGCCCCAAGACACAATACTTCATCCCATACGCCATAAAGAGTAAAGGGATTCCAGTAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | GTAATGCTGCTGCCTATTGTACAGAATCTCATCAAATaGGATGGGGGCACCTACTGCTGGGTAAGCTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: VMLLPIVQNLIK*DGGTYCWVSFR Trigger: TCTAAAGCTTACCCAGCAGTAGGTGCCCCCATCCCATTTGATGAGATTCTGTACAATAGGCAGCAGCATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CAA 72 bp | AATCCCTTTACTCTTTATGGCGTATGGGATGAAGTATaGTGTCTTGGGGCTAGCAAGTGGGCCCTTTATGCC | + |
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Preference number: 6 (lower is better) Translates to: NPFTLYGVWDEV*CLGASKWALYA Trigger: GGCATAAAGGGCCCACTTGCTAGCCCCAAGACACAATACTTCATCCCATACGCCATAAAGAGTAAAGGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | CAGAATCTCATCAAATGGGATGGGGGCACCTACTGCTaGGTAAGCTTTAGAGAGAATGACAGTAAAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: QNLIKWDGGTYC*VSFRENDSKSR Trigger: TCTGCTTTTACTGTCATTCTCTCTAAAGCTTACCCAGCAGTAGGTGCCCCCATCCCATTTGATGAGATTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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| CDS CCA 72 bp | TTTCACATGCACGTGGTAGGAGAAATAGTATATGCCTaGGATCTTACAGGTAAAGATACCAGATCTTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: FHMHVVGEIVYA*DLTGKDTRSWV Trigger: GACCCAAGATCTGGTATCTTTACCTGTAAGATCCCAGGCATATACTATTTCTCCTACCACGTGCATGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105511.2 |
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