Pregenerated sensors for COIL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033983Ensembl transcript IDs: ENSMUST00000036649.8, ENSMUST00000107898.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCCTaGTCTGAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCG | + |
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Preference number: 1 (lower is better) Translates to: SPSSLHCAARPLAPA*SEAHAQPSGSGRPA Trigger: CGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR TCA 90 bp | AAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCCTGGTCTaGGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: KFLALCSKAPCPSLV*GSRPAFWQWEASAP Trigger: AGGAGCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCACCAGCCTTCTGGCAGTaGGAGGCCAGCGCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SVMRSPSSLHCAARPLAPPAFWQ*EASAPP Trigger: TGGAGGAGCGCTGGCCTCCCACTGCCAGAAGGCTGG...TGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTCCTCCACACAATAGCACATTCTTGTGTGTaGTACTGTAAACTCCTACGG | + |
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Preference number: 2 (lower is better) Translates to: EAHAQPSGSGRPALLHTIAHSCV*YCKLLR Trigger: CCGTAGGAGTTTACAGTACCACACACAAGAATGTGC...TATTGTGTGGAGGAGCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR CAA 90 bp | TTTCTGTTTAAGATCCTCTCTTCAGTTATGAGGAGCCCAAGTTCCTaGCATTGTGCAGCAAGGCCCCTTGCCCCAGCCTGGTCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FLFKILSSVMRSPSS*HCAARPLAPAWSEA Trigger: AGCCTCAGACCAGGCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGAAGAGAGGATCTTAAACAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTGTAGCCAAACAGGTGTaGAGGAGCCTAGCACACCGC | + |
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Preference number: 2 (lower is better) Translates to: SMLHRTAHMSKIKSRNMPVAKQV*RSLAHR Trigger: GCGGTGTGCTAGGCTCCTTCACACCTGTTTGGCTAC...AGGCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGCCTTAGTACTTTACAATGTGACTTAAAAGAAACAAAGCAAGATGCACAGGTAGCCAAACAGGTGTaGAGGAGCCTAGCACACCGC | + |
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Preference number: 2 (lower is better) Translates to: TCLSTLQCDLKETKQDAQVAKQV*RSLAHR Trigger: GCGGTGTGCTAGGCTCCTTCACACCTGTTTGGCTAC...CTGTGCATCTTGCTTTGTTTCTTTTAAGTCACATTGTAAAGTACTAAGGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTAGAAACAAAGCAAGATaGACAGCACATTCTTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: ESCVSHLESVKGLFNSSPRNKAR*TAHSCV Trigger: CACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCT...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAACCCAGGTTTTCAAGTaGGTTACTGAATTTAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: DLKETKQDAQHILVCGTVTQVFK*VTEFSQ Trigger: CTGGCTAAATTCAGTAACCCACTTGAAAACCTGGGT...TACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR TCA 72 bp | GCATTGTGCAGCAAGGCCCCTTGCCCCAGCCTGGTCTaGGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: ALCSKAPCPSLV*GSRPAFWQWEA Trigger: GGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGGCAAGGGGCCTTGCTGCACAATGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR CCA 72 bp | TCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCCTaGTCTGAGGCTCACGCCCAGCCTTCTGGCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLHCAARPLAPA*SEAHAQPSGSG Trigger: CCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR GCA 72 bp | GCTCCTCCACACAATACAACAAGGATGCCTCCCCACTaGGGGCTGCGCGGGCTCCTAGGAGTCCTGTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: APPHNTTRMPPH*GLRGLLGVLCF Trigger: GAAACACAGGACTCCTAGGAGCCCGCGCAGCCCGCAGTGGGGAGGCATCCTTGTTGTATTGTGTGGAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR TCA 72 bp | TCCTACGGACGATTGCTACTGGTAGCCAAACAGGTGTaGAGGAGCCTAGCACACCGCCATTTTGGTCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SYGRLLLVAKQV*RSLAHRHFGQH Trigger: GTGCTGACCAAAATGGCGGTGTGCTAGGCTCCTTCACACCTGTTTGGCTACCAGTAGCAATCGTCCGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR TCA 72 bp | CTCATCACCTCTGACAAATCCAACCCCACTAACTCCTaGGGAGAGCAGGGAGAAACTGTGGAATGGGCGAGA | + |
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Preference number: 3 (lower is better) Translates to: LITSDKSNPTNS*GEQGETVEWAR Trigger: TCTCGCCCATTCCACAGTTTCTCCCTGCTCTCCTCAGGAGTTAGTGGGGTTGGATTTGTCAGAGGTGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR CCA 72 bp | ACCCCACTAACTCCTGAGGAGAGCAGGGAGAAACTGTaGAATGGGCGAGATGCTCTATGCTTCACAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: TPLTPEESREKL*NGRDALCFTEQ Trigger: CTGTTCTGTGAAGCATAGAGCATCTCGCCCATTCCACAGTTTCTCCCTGCTCTCCTCAGGAGTTAGTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR GCA 72 bp | AGCAGGGAGAAACTGTGGAATGGGCGAGATGCTCTATaGTTCACAGAACAGCTCACATGTCAAAAATTAAGT | + |
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Preference number: 3 (lower is better) Translates to: SREKLWNGRDAL*FTEQLTCQKLS Trigger: ACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGAGCATCTCGCCCATTCCACAGTTTCTCCCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR TCA 72 bp | AAAGGAAATTTCTGTTTAAGATCCTCTCTTCAGTTATaGGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: KGNFCLRSSLQL*GAQVPCIVQQG Trigger: GCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGAAGAGAGGATCTTAAACAGAAATTTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGCCTGGTCTGAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCGGTAAAGCCAGGCTTTaGGGCCTGCCTGTTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PQPGLRLTPSLLAVGGQRGKARL*GLPVGS Trigger: GCTGCCAACAGGCAGGCCTCAAAGCCTGGCTTTACC...GCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCTGGTCTGAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCCTGCCTGTTGGCAGCTaGAGTCTTGGTAGCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PQPGLRLTPSLLAVGGQRLPVGS*SLGSRC Trigger: GCACCTGCTACCAAGACTGCAGCTGCCAACAGGCAG...GCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCTGGTCTGAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCGGACCAGAACCCCCTTaGCCTGCAAAGAGGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: PQPGLRLTPSLLAVGGQRGPEPP*PAKRPV Trigger: AACTGGCCTCTTTGCAGGGCAAGGGGGTTCTGGTCC...GCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR CAA 72 bp | GGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTaGCCCCAGCCTGGTCTGAGGCTCACGCCCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GAQVPCIVQQGP*PQPGLRLTPSL Trigger: AAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | GAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTCCTCCACACAATACCAGGCTTTGAGGCCTaGCTGTTGGCAGCTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: EAHAQPSGSGRPALLHTIPGFEA*LLAAAV Trigger: GACTGCAGCTGCCAACAGGCAGGCCTCAAAGCCTGG...TATTGTGTGGAGGAGCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGCCTGGTCTGAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTCAGACTCTGACAGGTaGCCTGAGCTACCTTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: PQPGLRLTPSLLAVGGQRSDSDR*PELPFS Trigger: GCTAAAAGGTAGCTCAGGCCACCTGTCAGAGTCTGA...GCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCACCGTGCAGTGTGGAGTaGCCGGCGGCGGGTAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SVMRSPSSLHCAARPLAPPCSVE*PAAGSQ Trigger: TTGACTACCCGCCGCCGGCCACTCCACACTGCACGG...TGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR TCA 90 bp | AGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCGTGGCCATCGCTGACTaGCTCTGGGCAGGACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SYEEPKFLALCSKAPCPSVAIAD*LWAGLR Trigger: TCTGAGTCCTGCCCAGAGTCAGTCAGCGATGGCCAC...GCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR TCA 90 bp | AGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCGGTAAAGCCAGGCTTTaGGGCCTGCCTGTTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SYEEPKFLALCSKAPCPSGKARL*GLPVGS Trigger: GCTGCCAACAGGCAGGCCTCAAAGCCTGGCTTTACC...GCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | TCAGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGAAGCCAGAAGACCGTaGAGTGTGGAGTGGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SVMRSPSSLHCAARPLAPEARRP*SVEWPA Trigger: CGCCGGCCACTCCACACTGCACGGTCTTCTGGCTTC...TGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | GAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTCCTCCACACAATAGAAAAGGTGACCTCCTaGATCATGACACTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: EAHAQPSGSGRPALLHTIEKVTS*IMTLQW Trigger: CCACTGCAGTGTCATGATGCAGGAGGTCACCTTTTC...TATTGTGTGGAGGAGCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCACTTTACCGAGGCTTCTaGGGGAGGCCCTGGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SVMRSPSSLHCAARPLAPLYRGF*GRPWGS Trigger: GCTTCCCCAGGGCCTCCCCCAGAAGCCTCGGTAAAG...TGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR CCA 90 bp | AGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCTGGATGACGAGGTTCTaGAGGCCTTGCCCTTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SYEEPKFLALCSKAPCPSWMTRF*RPCPCR Trigger: CCGGCAAGGGCAAGGCCTCCAGAACCTCGTCATCCA...GCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTCCTCCACACAATAAACTGGAGTCTGAACTaGATGACGAGGTTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: EAHAQPSGSGRPALLHTINWSLN*MTRFWR Trigger: CCTCCAGAACCTCGTCATCCAGTTCAGACTCCAGTT...TATTGTGTGGAGGAGCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR CCA 90 bp | AGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCTGGGGACAGGCGTACTaGGAGGACCAGGAGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SYEEPKFLALCSKAPCPSWGQAY*EDQELV Trigger: GACAAGCTCCTGGTCCTCCCAGTACGCCTGTCCCCA...GCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | GAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTCCTCCACACAATAAGTCTTGGTAGCAGGTaGATCTTTCAACAGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: EAHAQPSGSGRPALLHTISLGSR*IFQQLS Trigger: GCTGAGCTGTTGAAAGATGCACCTGCTACCAAGACT...TATTGTGTGGAGGAGCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR TCA 90 bp | AGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCGTGATCCTCTTCTCCTaGGTCACAGCGTATTCCACC | + |
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Preference number: 4 (lower is better) Translates to: SYEEPKFLALCSKAPCPSVILFS*VTAYST Trigger: GGTGGAATACGCTGTGACTCAGGAGAAGAGGATCAC...GCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| 3UTR CAA 72 bp | AAGATCCTCTCTTCAGTTATGAGGAGCCCAAGTTCCTaGCATTGTGCAGCAAGGCCCCTTGCCCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KILSSVMRSPSS*HCAARPLAPAW Trigger: CCAGGCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGAAGAGAGGATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | TCAGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCATGTCCTCCTGCCTCTTaGAGTGCTTCTTCAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: SVMRSPSSLHCAARPLAPCPPAS*SASSKT Trigger: AGTCTTTGAAGAAGCACTGCAAGAGGCAGGAGGACA...TGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | TCAGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAAGTCTTGGTAGCAGGTaGATCTTTCAACAGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SVMRSPSSLHCAARPLAPSLGSR*IFQQLS Trigger: GCTGAGCTGTTGAAAGATGCACCTGCTACCAAGACT...TGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR CCA 90 bp | AGCACCCAGGTTTTCAAGTGGGTTACTGAATTTAGCCAGAAGGAAATAAGGATCCCGTGCAGTGTGGAGTaGCCGGCGGCGGGTAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: STQVFKWVTEFSQKEIRIPCSVE*PAAGSQ Trigger: TTGACTACCCGCCGCCGGCCACTCCACACTGCACGG...GATCCTTATTTCCTTCTGGCTAAATTCAGTAACCCACTTGAAAACCTGGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR CCA 90 bp | AGCACCCAGGTTTTCAAGTGGGTTACTGAATTTAGCCAGAAGGAAATAAGGATCGAAGACCGTGCAGTGTaGAGTGGCCGGCGGCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: STQVFKWVTEFSQKEIRIEDRAV*SGRRRV Trigger: TACCCGCCGCCGGCCACTCCACACTGCACGGTCTTC...GATCCTTATTTCCTTCTGGCTAAATTCAGTAACCCACTTGAAAACCTGGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR CCA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTGAAGACCGTGCAGTGTaGAGTGGCCGGCGGCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: ESCVSHLESVKGLFNSSPEDRAV*SGRRRV Trigger: TACCCGCCGCCGGCCACTCCACACTGCACGGTCTTC...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR TCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAAGGAGCGCCCCGGAACTaGAGCCGAAGCGCTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKGAPRN*SRSAGG Trigger: TCCGCCAGCGCTTCGGCTTCAGTTCCGGGGCGCTCC...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR TCA 90 bp | TCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTGGAGCGCCCCGGAACTaGAGCCGAAGCGCTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: SMLHRTAHMSKIKSRNMPGAPRN*SRSAGG Trigger: TCCGCCAGCGCTTCGGCTTCAGTTCCGGGGCGCTCC...AGGCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR TCA 90 bp | TCAGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAAAAGACTTGTATCCCTaGTCTGTTTCCTCATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SVMRSPSSLHCAARPLAPKDLYP*SVSSSS Trigger: GGAGGATGAGGAAACAGATCAGGGATACAAGTCTTT...TGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | AGCACCCAGGTTTTCAAGTGGGTTACTGAATTTAGCCAGAAGGAAATAAGGATCGAAGCCAGAAGACCGTaGAGTGTGGAGTGGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: STQVFKWVTEFSQKEIRIEARRP*SVEWPA Trigger: CGCCGGCCACTCCACACTGCACGGTCTTCTGGCTTC...GATCCTTATTTCCTTCTGGCTAAATTCAGTAACCCACTTGAAAACCTGGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS-3UTR GCA 90 bp | AGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCTCCTGCCTCTTGCAGTaGTTCTTCAAAGACTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SYEEPKFLALCSKAPCPSSCLLQ*FFKDLY Trigger: ATACAAGTCTTTGAAGAAGCACTGCAAGAGGCAGGA...GCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | AGCACCCAGGTTTTCAAGTGGGTTACTGAATTTAGCCAGAAGGAAATAAGGATCAGGCCCTGGGGAAGCTaGAGTTCTGTGAGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: STQVFKWVTEFSQKEIRIRPWGS*SSVRPP Trigger: AGGGGGCCTCACAGAACTGCAGCTTCCCCAGGGCCT...GATCCTTATTTCCTTCTGGCTAAATTCAGTAACCCACTTGAAAACCTGGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGGCTCTACTGGATTCTaGATCACCACAGATGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVMRSPSSLHCAARPLAPGSTGF*ITTDEF Trigger: AAACTCATCTGTGGTGATCCAGAATCCAGTAGAGCC...TGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTTGCAGTGGCCATCGCTaGCTGACTCTGGGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ESCVSHLESVKGLFNSSPCSGHR*LTLGRT Trigger: AGTCCTGCCCAGAGTCAGTCAGCGATGGCCACTGCA...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTTGGATGACGAGGTTCTaGAGGCCTTGCCCTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESCVSHLESVKGLFNSSPWMTRF*RPCPCR Trigger: CCGGCAAGGGCAAGGCCTCCAGAACCTCGTCATCCA...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCCAGGTTTTCAAGTGGGTTACTGAATTTAGCCAGAAGGAAATAAGGATCTGGGGACAGGCGTACTaGGAGGACCAGGAGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: STQVFKWVTEFSQKEIRIWGQAY*EDQELV Trigger: GACAAGCTCCTGGTCCTCCCAGTACGCCTGTCCCCA...GATCCTTATTTCCTTCTGGCTAAATTCAGTAACCCACTTGAAAACCTGGGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | AGCACCCAGGTTTTCAAGTGGGTTACTGAATTTAGCCAGAAGGAAATAAGGATCGGACCAGAACCCCCTTaGCCTGCAAAGAGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: STQVFKWVTEFSQKEIRIGPEPP*PAKRPV Trigger: AACTGGCCTCTTTGCAGGGCAAGGGGGTTCTGGTCC...GATCCTTATTTCCTTCTGGCTAAATTCAGTAACCCACTTGAAAACCTGGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAAAGGCCCTGGGGAAGCTaGAGTTCTGTGAGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKRPWGS*SSVRPP Trigger: AGGGGGCCTCACAGAACTGCAGCTTCCCCAGGGCCT...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | TCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTCTTTACCGAGGCTTCTaGGGGAGGCCCTGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SMLHRTAHMSKIKSRNMPLYRGF*GRPWGS Trigger: GCTTCCCCAGGGCCTCCCCCAGAAGCCTCGGTAAAG...AGGCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAAGTGGCCATCGCTGACTaGCTCTGGGCAGGACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKVAIAD*LWAGLR Trigger: TCTGAGTCCTGCCCAGAGTCAGTCAGCGATGGCCAC...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTGTGATCCTCTTCTCCTaGGTCACAGCGTATTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ESCVSHLESVKGLFNSSPVILFS*VTAYST Trigger: GGTGGAATACGCTGTGACTCAGGAGAAGAGGATCAC...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTCCAGGCTTTGAGGCCTaGCTGTTGGCAGCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SMLHRTAHMSKIKSRNMPPGFEA*LLAAAV Trigger: GACTGCAGCTGCCAACAGGCAGGCCTCAAAGCCTGG...AGGCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAAGAGGCCTTCTCATTCTaGCCGCTGTCCTCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKEAFSF*PLSSCL Trigger: GAGGCAGGAGGACAGCGGCCAGAATGAGAAGGCCTC...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTCTTCCCAAACTGGTaGGGACAGGCGTACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALCFTEQLTCQKLSQETCLFPNW*GQAYWE Trigger: CTCCCAGTACGCCTGTCCCCACCAGTTTGGGAAGAG...GCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAAGAAGCTGCAGTTCTGTaGGGCCCCCTCTTTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKEAAVL*GPLFRR Trigger: ACGCCTAAAGAGGGGGCCTCACAGAACTGCAGCTTC...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTTGGCCGCTGTCCTCCTaGCTCTTGCAGTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMLHRTAHMSKIKSRNMPWPLSS*LLQCFF Trigger: GAAGAAGCACTGCAAGAGGCAGGAGGACAGCGGCCA...AGGCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTGAAAAGGTGACCTCCTaGATCATGACACTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESCVSHLESVKGLFNSSPEKVTS*IMTLQW Trigger: CCACTGCAGTGTCATGATGCAGGAGGTCACCTTTTC...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAACTGCCTGTTGGCAGCTaGAGTCTTGGTAGCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKLPVGS*SLGSRC Trigger: GCACCTGCTACCAAGACTGCAGCTGCCAACAGGCAG...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | GACTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAGAACCCCCTTGCCCTaGAAAGAGGCCAGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLKETKQDAQHILVCGTVRTPLP*KEASWL Trigger: AAGCCAACTGGCCTCTTTGCAGGGCAAGGGGGTTCT...TACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCCAGGTTTTCAAGTGGGTTACTGAATTTAGCCAGAAGGAAATAAGGATCCTTTGCTTTCCTGCATaGGAAACTAGAGTCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: STQVFKWVTEFSQKEIRILCFPA*ETRVAT Trigger: GGTGGCGACTCTAGTTTCCCATGCAGGAAAGCAAAG...GATCCTTATTTCCTTCTGGCTAAATTCAGTAACCCACTTGAAAACCTGGGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTCATCCTCTTCGGCTaGGCTGCCTGTCACTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALCFTEQLTCQKLSQETCLILFG*AACHFA Trigger: AGCAAAGTGACAGGCAGCCCAGCCGAAGAGGATGAG...GCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTAACTGGAGTCTGAACTaGATGACGAGGTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESCVSHLESVKGLFNSSPNWSLN*MTRFWR Trigger: CCTCCAGAACCTCGTCATCCAGTTCAGACTCCAGTT...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAACTCTTCCCAAACTGGTaGGGACAGGCGTACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKLFPNW*GQAYWE Trigger: CTCCCAGTACGCCTGTCCCCACCAGTTTGGGAAGAG...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | ACATGCCTTAGTACTTTACAATGTGACTTAAAAGAAACAAAGCAAGATGCACAGTGGCCGCTGTCCTCCTaGCTCTTGCAGTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TCLSTLQCDLKETKQDAQWPLSS*LLQCFF Trigger: GAAGAAGCACTGCAAGAGGCAGGAGGACAGCGGCCA...CTGTGCATCTTGCTTTGTTTCTTTTAAGTCACATTGTAAAGTACTAAGGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTAGAACCCCCTTGCCCTaGAAAGAGGCCAGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMLHRTAHMSKIKSRNMPRTPLP*KEASWL Trigger: AAGCCAACTGGCCTCTTTGCAGGGCAAGGGGGTTCT...AGGCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAACTCATCCTCTTCGGCTaGGCTGCCTGTCACTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKLILFG*AACHFA Trigger: AGCAAAGTGACAGGCAGCCCAGCCGAAGAGGATGAG...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCCAGGTTTTCAAGTGGGTTACTGAATTTAGCCAGAAGGAAATAAGGATCAAAGACTTGTATCCCTaGTCTGTTTCCTCATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STQVFKWVTEFSQKEIRIKDLYP*SVSSSS Trigger: GGAGGATGAGGAAACAGATCAGGGATACAAGTCTTT...GATCCTTATTTCCTTCTGGCTAAATTCAGTAACCCACTTGAAAACCTGGGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | GACTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTACTTCCGACTCTGAACTaGAGTCTGAACTGGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: DLKETKQDAQHILVCGTVLPTLN*SLNWMT Trigger: CGTCATCCAGTTCAGACTCCAGTTCAGAGTCGGAAG...TACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTTCCGACTCTGAACTaGAGTCTGAACTGGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: ALCFTEQLTCQKLSQETCLPTLN*SLNWMT Trigger: CGTCATCCAGTTCAGACTCCAGTTCAGAGTCGGAAG...GCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTTCCTGCCTCTTGCAGTaGTTCTTCAAAGACTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ESCVSHLESVKGLFNSSPSCLLQ*FFKDLY Trigger: ATACAAGTCTTTGAAGAAGCACTGCAAGAGGCAGGA...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | GACTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTACTTTGCTCTTTTTCTTaGTCTTTGTCCGCCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLKETKQDAQHILVCGTVLCSFS*SLSAPS Trigger: AGACGGGGCGGACAAAGAGCAAGAAAAAGAGCAAAG...TACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAACTTTGCTCTTTTTCTTaGTCTTTGTCCGCCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKLCSFS*SLSAPS Trigger: AGACGGGGCGGACAAAGAGCAAGAAAAAGAGCAAAG...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCGGCTGCCTGTCACTTTaGTCTTTTTCTTGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALCFTEQLTCQKLSQETCGCLSL*SFSCSL Trigger: CAAAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCC...GCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCGGCTCTACTGGATTCTaGATCACCACAGATGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALCFTEQLTCQKLSQETCGSTGF*ITTDEF Trigger: AAACTCATCTGTGGTGATCCAGAATCCAGTAGAGCC...GCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAAGGCTGCCTGTCACTTTaGTCTTTTTCTTGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKGCLSL*SFSCSL Trigger: CAAAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCC...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAAAACTGTCTCTGCTTCTaGCTCTCAGAGCTTCTATTA | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKARCTAHSCVWYCKNCLCF*LSELLL Trigger: TAATAGAAGCTCTGAGAGTCAGAAGCAGAGACAGTT...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR TCA 90 bp | ACATGCCTTAGTACTTTACAATGTGACTTAAAAGAAACAAAGCAAGATGCACAGAACTGTCTCTGCTTCTaGCTCTCAGAGCTTCTATTA | + |
|
Preference number: 4 (lower is better) Translates to: TCLSTLQCDLKETKQDAQNCLCF*LSELLL Trigger: TAATAGAAGCTCTGAGAGTCAGAAGCAGAGACAGTT...CTGTGCATCTTGCTTTGTTTCTTTTAAGTCACATTGTAAAGTACTAAGGCATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCCTGGTCTGAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCACCCTGAGGCTGTCGTaGTCTCTCACCAGGCGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PQPGLRLTPSLLAVGGQRTLRLS*SLTRRA Trigger: CGCGCGCCTGGTGAGAGACAACGACAGCCTCAGGGT...GCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCCTGGTCTGAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTGTTGTTTGGAAGACTaGGAGGCCCTGGTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PQPGLRLTPSLLAVGGQRCCLED*EALVCF Trigger: GAAGCAGACCAGGGCCTCCAAGTCTTCCAAACAACA...GCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCCTGGTCTGAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCCTCTTTAGGCGTCTGTaGTTTGGAAGACTTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQPGLRLTPSLLAVGGQRLFRRL*FGRLGG Trigger: GCCTCCAAGTCTTCCAAACAACAGACGCCTAAAGAG...GCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTCAGACCAGGCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTCCTCCACACAATATGGACCAGAACCCCCTaGCCCTGCAAAGAGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EAHAQPSGSGRPALLHTIWTRTP*PCKEAS Trigger: ACTGGCCTCTTTGCAGGGCAAGGGGGTTCTGGTCCA...TATTGTGTGGAGGAGCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTCACGCCCAGCCTTCTGGCAGTGGGAGGCCAGCGCTCCTCCACACAATATGTTGTTTGGAAGACTaGGAGGCCCTGGTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EAHAQPSGSGRPALLHTICCLED*EALVCF Trigger: GAAGCAGACCAGGGCCTCCAAGTCTTCCAAACAACA...TATTGTGTGGAGGAGCGCTGGCCTCCCACTGCCAGAAGGCTGGGCGTGAGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | AGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCGAGGTTCTGGAGGCCTaGCCCTTGCCGGAGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SYEEPKFLALCSKAPCPSEVLEA*PLPELK Trigger: CTTCAGCTCCGGCAAGGGCAAGGCCTCCAGAACCTC...GCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 90 bp | GCCTTGCCCTTGCCGGAGCTGAAGGTAAAGCCAGGCTTTGAGGCCTaGCTGTTGGCAGCTGCAGTCTTGGTAGCAGGTGCATCTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALPLPELKVKPGFEA*LLAAAVLVAGASFN Trigger: GTTGAAAGATGCACCTGCTACCAAGACTGCAGCTGCCAACAGGCAGGCCTCAAAGCCTGGCTTTACCTTCAGCTCCGGCAAGGGCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 90 bp | ATAATACCCGGAGTCTCCAATGACAGCCCTGGACCAGAACCCCCTTaGCCTGCAAAGAGGCCAGTTGGCTTTAAGAAGCCAGCAGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: IIPGVSNDSPGPEPP*PAKRPVGFKKPADA Trigger: CGCATCTGCTGGCTTCTTAAAGCCAACTGGCCTCTTTGCAGGGCAAGGGGGTTCTGGTCCAGGGCTGTCATTGGAGACTCCGGGTATTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | AGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCTTGGCAGCTGCAGTCTaGGTAGCAGGTGCATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SYEEPKFLALCSKAPCPSLAAAV*VAGASF Trigger: GAAAGATGCACCTGCTACCAAGACTGCAGCTGCCAA...GCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CCA 90 bp | TCATCTGGGAGGAGTTTAGTTTCCAGGTCCGAGGCCTTCTCATTCTaGCCGCTGTCCTCCTGCCTCTTGCAGTGCTTCTTCAAAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGRSLVSRSEAFSF*PLSSCLLQCFFKDL Trigger: CAAGTCTTTGAAGAAGCACTGCAAGAGGCAGGAGGACAGCGGCCAGAATGAGAAGGCCTCGGACCTGGAAACTAAACTCCTCCCAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CCA 90 bp | CAGTTGGCTTTAAGAAGCCAGCAGATGCGCCCTCGAGCATGTTCTTaGACACCAGGAACTGGTCTTCCGACTCTGAACTGGAGTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QLALRSQQMRPRACS*TPGTGLPTLNWSLN Trigger: GTTCAGACTCCAGTTCAGAGTCGGAAGACCAGTTCCTGGTGTCCAAGAACATGCTCGAGGGCGCATCTGCTGGCTTCTTAAAGCCAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | AGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCAGCGGGCTGCCTGTCACTTaGCTCTTTTTCTTGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SYEEPKFLALCSKAPCPSGLPVT*LFFLLF Trigger: AAAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCCC...GCTGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CCA 90 bp | TGTCACTTTGCTCTTTTTCTTGCTCTTTGTCCGCCCCGTCTCATCTaGGAGGAGTTTAGTTTCCAGGTCCGAGGCCTTCTCATTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CHFALFLALCPPRLI*EEFSFQVRGLLILA Trigger: GGCCAGAATGAGAAGGCCTCGGACCTGGAAACTAAACTCCTCCCAGATGAGACGGGGCGGACAAAGAGCAAGAAAAAGAGCAAAGTGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTGAGGTTCTGGAGGCCTaGCCCTTGCCGGAGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESCVSHLESVKGLFNSSPEVLEA*PLPELK Trigger: CTTCAGCTCCGGCAAGGGCAAGGCCTCCAGAACCTC...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCACCCTGAGGCTGTCGTaGTCTCTCACCAGGCGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ALCFTEQLTCQKLSQETCTLRLS*SLTRRA Trigger: CGCGCGCCTGGTGAGAGACAACGACAGCCTCAGGGT...GCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTTATGAGGAGCCCAAGTTCCTTGCATTGTGCAGCAAGGCCCCTTGCCCCATTTGAAGACTTCTTTTaGGTCTCTTCCTCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVMRSPSSLHCAARPLAPFEDFF*VSSSSS Trigger: AGAGGATGAGGAAGAGACCAAAAAGAAGTCTTCAAA...TGGGGCAAGGGGCCTTGCTGCACAATGCAAGGAACTTGGGCTCCTCATAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCTGGACCAGAACCCCCTaGCCCTGCAAAGAGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALCFTEQLTCQKLSQETCWTRTP*PCKEAS Trigger: ACTGGCCTCTTTGCAGGGCAAGGGGGTTCTGGTCCA...GCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCCTGTGTTTCACATCTGGAAAGTGTGAAAGGACTCTTTAACTCATCACCTGGGCTGCCTGTCACTTaGCTCTTTTTCTTGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ESCVSHLESVKGLFNSSPGLPVT*LFFLLF Trigger: AAAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCCC...AGGTGATGAGTTAAAGAGTCCTTTCACACTTTCCAGATGTGAAACACAGGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | GACTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTATTGGCAGCTGCAGTCTaGGTAGCAGGTGCATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLKETKQDAQHILVCGTVLAAAV*VAGASF Trigger: GAAAGATGCACCTGCTACCAAGACTGCAGCTGCCAA...TACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTGCAAAGAGGCCAGTaGGCTTTAAGAAGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALCFTEQLTCQKLSQETCLQRGQ*ALRSQQ Trigger: CTGCTGGCTTCTTAAAGCCAACTGGCCTCTTTGCAG...GCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAACTGTCCTCCTGCCTCTaGCAGTGCTTCTTCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LKRNKARCTAHSCVWYCKLSSCL*QCFFKD Trigger: GTCTTTGAAGAAGCACTGCAAGAGGCAGGAGGACAG...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAACTGCAAAGAGGCCAGTaGGCTTTAAGAAGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKRNKARCTAHSCVWYCKLQRGQ*ALRSQQ Trigger: CTGCTGGCTTCTTAAAGCCAACTGGCCTCTTTGCAG...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAACTTGTCTGCCCCGGTTaGAGTCAGAAGACTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LKRNKARCTAHSCVWYCKLVCPG*SQKTSI Trigger: GATGGAAGTCTTCTGACTCAAACCGGGGCAGACAAG...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | ACATGCCTTAGTACTTTACAATGTGACTTAAAAGAAACAAAGCAAGATGCACAGCTGTCCTCCTGCCTCTaGCAGTGCTTCTTCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TCLSTLQCDLKETKQDAQLSSCL*QCFFKD Trigger: GTCTTTGAAGAAGCACTGCAAGAGGCAGGAGGACAG...CTGTGCATCTTGCTTTGTTTCTTTTAAGTCACATTGTAAAGTACTAAGGCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | TCTATGCTTCACAGAACAGCTCACATGTCAAAAATTAAGTCAAGAAACATGCCTACTTTGCTCTTTTTCTaGCTCTTTGTCCGCCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SMLHRTAHMSKIKSRNMPTLLFF*LFVRPV Trigger: GACGGGGCGGACAAAGAGCAAGAAAAAGAGCAAAGT...AGGCATGTTTCTTGACTTAATTTTTGACATGTGAGCTGTTCTGTGAAGCATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTAAACTCTTTAGGCGTCTGTaGTTTGGAAGACTTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LKRNKARCTAHSCVWYCKLFRRL*FGRLGG Trigger: GCCTCCAAGTCTTCCAAACAACAGACGCCTAAAGAG...TTTACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | ACATGCCTTAGTACTTTACAATGTGACTTAAAAGAAACAAAGCAAGATGCACAGCTTGTCTGCCCCGGTTaGAGTCAGAAGACTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TCLSTLQCDLKETKQDAQLVCPG*SQKTSI Trigger: GATGGAAGTCTTCTGACTCAAACCGGGGCAGACAAG...CTGTGCATCTTGCTTTGTTTCTTTTAAGTCACATTGTAAAGTACTAAGGCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS-3UTR CAA 90 bp | GACTTAAAAGAAACAAAGCAAGATGCACAGCACATTCTTGTGTGTGGTACTGTATTTGAAGACTTCTTTTaGGTCTCTTCCTCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLKETKQDAQHILVCGTVFEDFF*VSSSSS Trigger: AGAGGATGAGGAAGAGACCAAAAAGAAGTCTTCAAA...TACAGTACCACACACAAGAATGTGCTGTGCATCTTGCTTTGTTTCTTTTAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 72 bp | CTCTCAGAGCTTCTATTAAAGACACAGGAGACCGCTTaGCCGCGCCCTCGCCCTCGGCCCCGGACACCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSELLLKTQETA*PRPRPRPRTPR Trigger: CCGGGGTGTCCGGGGCCGAGGGCGAGGGCGCGGGCAAGCGGTCTCCTGTGTCTTTAATAGAAGCTCTGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 72 bp | ACTCTCAGAGCTTCTATTAAAGACACAGGAGACCGCTaGCCCGCGCCCTCGCCCTCGGCCCCGGACACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TLRASIKDTGDR*PAPSPSAPDTP Trigger: CGGGGTGTCCGGGGCCGAGGGCGAGGGCGCGGGCAAGCGGTCTCCTGTGTCTTTAATAGAAGCTCTGAGAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CCA 72 bp | CCGTGCTGCTTCTCCTTCGGGCTTTACCGAGGCTTCTaGGGGAGGCCCTGGGGAAGCTGCAGTTCTGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PCCFSFGLYRGF*GRPWGSCSSVR Trigger: CCTCACAGAACTGCAGCTTCCCCAGGGCCTCCCCCAGAAGCCTCGGTAAAGCCCGAAGGAGAAGCAGCACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 72 bp | CTGACAGGTGGCCTGAGCTACCTTTTAGCCCCGTGCTaGTTCTCCTTCGGGCTTTACCGAGGCTTCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTGGLSYLLAPC*FSFGLYRGFWG Trigger: CCCCCAGAAGCCTCGGTAAAGCCCGAAGGAGAAGCAGCACGGGGCTAAAAGGTAGCTCAGGCCACCTGTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 90 bp | ATGACAGCCCTGGACCAGAACCCCCTTGCCCTGCAAAGAGGCCAGTaGGCTTTAAGAAGCCAGCAGATGCGCCCTCGAGCATGTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: MTALDQNPLALQRGQ*ALRSQQMRPRACSW Trigger: CCAAGAACATGCTCGAGGGCGCATCTGCTGGCTTCTTAAAGCCAACTGGCCTCTTTGCAGGGCAAGGGGGTTCTGGTCCAGGGCTGTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 72 bp | TTGCCGGAGCTGAAGGTAAAGCCAGGCTTTGAGGCCTaGCTGTTGGCAGCTGCAGTCTTGGTAGCAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPELKVKPGFEA*LLAAAVLVAGA Trigger: TGCACCTGCTACCAAGACTGCAGCTGCCAACAGGCAGGCCTCAAAGCCTGGCTTTACCTTCAGCTCCGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CCA 72 bp | CTGACTGACTCTGGGCAGGACTCAGACTCTGACAGGTaGCCTGAGCTACCTTTTAGCCCCGTGCTGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LTDSGQDSDSDR*PELPFSPVLLL Trigger: GAGAAGCAGCACGGGGCTAAAAGGTAGCTCAGGCCACCTGTCAGAGTCTGAGTCCTGCCCAGAGTCAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 72 bp | GGAGTCTCCAATGACAGCCCTGGACCAGAACCCCCTTaGCCTGCAAAGAGGCCAGTTGGCTTTAAGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GVSNDSPGPEPP*PAKRPVGFKKP Trigger: TGGCTTCTTAAAGCCAACTGGCCTCTTTGCAGGGCAAGGGGGTTCTGGTCCAGGGCTGTCATTGGAGACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 90 bp | GGGAAGCTGCAGTTCTGTGAGGCCCCCTCTTTAGGCGTCTGTTGTTaGGAAGACTTGGAGGCCCTGGTCTGCTTCTTCGGTTCACACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GKLQFCEAPSLGVCC*EDLEALVCFFGSHF Trigger: GAAGTGTGAACCGAAGAAGCAGACCAGGGCCTCCAAGTCTTCCAAACAACAGACGCCTAAAGAGGGGGCCTCACAGAACTGCAGCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 72 bp | CTTCGGCTGGGCTGCCTGTCACTTTGCTCTTTTTCTTaGTCTTTGTCCGCCCCGTCTCATCTGGGAGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LRLGCLSLCSFS*SLSAPSHLGGV Trigger: AACTCCTCCCAGATGAGACGGGGCGGACAAAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCCCAGCCGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CCA 72 bp | AGGAGTTTAGTTTCCAGGTCCGAGGCCTTCTCATTCTaGCCGCTGTCCTCCTGCCTCTTGCAGTGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSLVSRSEAFSF*PLSSCLLQCFF Trigger: GAAGAAGCACTGCAAGAGGCAGGAGGACAGCGGCCAGAATGAGAAGGCCTCGGACCTGGAAACTAAACTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 72 bp | TCTTCGGCTGGGCTGCCTGTCACTTTGCTCTTTTTCTaGCTCTTTGTCCGCCCCGTCTCATCTGGGAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSAGLPVTLLFF*LFVRPVSSGRS Trigger: ACTCCTCCCAGATGAGACGGGGCGGACAAAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCCCAGCCGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 72 bp | GAGGCCCCCTCTTTAGGCGTCTGTTGTTTGGAAGACTaGGAGGCCCTGGTCTGCTTCTTCGGTTCACACTTC | + |
|
Preference number: 6 (lower is better) Translates to: EAPSLGVCCLED*EALVCFFGSHF Trigger: GAAGTGTGAACCGAAGAAGCAGACCAGGGCCTCCAAGTCTTCCAAACAACAGACGCCTAAAGAGGGGGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 72 bp | CAGTTCTGTGAGGCCCCCTCTTTAGGCGTCTGTTGTTaGGAAGACTTGGAGGCCCTGGTCTGCTTCTTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: QFCEAPSLGVCC*EDLEALVCFFG Trigger: ACCGAAGAAGCAGACCAGGGCCTCCAAGTCTTCCAAACAACAGACGCCTAAAGAGGGGGCCTCACAGAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS TCA 72 bp | AGAAGACTTCCATCCCATAATACCCGGAGTCTCCAATaGCAGCCCTGGACCAGAACCCCCTTGCCCTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RRLPSHNTRSLQ*QPWTRTPLPCK Trigger: TTTGCAGGGCAAGGGGGTTCTGGTCCAGGGCTGTCATTGGAGACTCCGGGTATTATGGGATGGAAGTCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS TCA 72 bp | TCAGCCTCGGATCGATCAACTCTCTCCAGAGCACGGTaGTCCTCTTCTCCTGAGTCACAGCGTATTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SASDRSTLSRAR*SSSPESQRIPP Trigger: TGGTGGAATACGCTGTGACTCAGGAGAAGAGGATCACCGTGCTCTGGAGAGAGTTGATCGATCCGAGGCTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 72 bp | CTTCCTCATCCTCTTCGGCTGGGCTGCCTGTCACTTTaGTCTTTTTCTTGCTCTTTGTCCGCCCCGTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPHPLRLGCLSL*SFSCSLSAPSH Trigger: ATGAGACGGGGCGGACAAAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCCCAGCCGAAGAGGATGAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CCA 72 bp | GCTCTTTTTCTTGCTCTTTGTCCGCCCCGTCTCATCTaGGAGGAGTTTAGTTTCCAGGTCCGAGGCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALFLALCPPRLI*EEFSFQVRGLL Trigger: GAGAAGGCCTCGGACCTGGAAACTAAACTCCTCCCAGATGAGACGGGGCGGACAAAGAGCAAGAAAAAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 90 bp | TCCTCATCCTCTTCGGCTGGGCTGCCTGTCACTTTGCTCTTTTTCTaGCTCTTTGTCCGCCCCGTCTCATCTGGGAGGAGTTTAGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSAGLPVTLLFF*LFVRPVSSGRSLVS Trigger: GGAAACTAAACTCCTCCCAGATGAGACGGGGCGGACAAAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCCCAGCCGAAGAGGATGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 90 bp | CCAGTTGGCTTTAAGAAGCCAGCAGATGCGCCCTCGAGCATGTTCTaGGACACCAGGAACTGGTCTTCCGACTCTGAACTGGAGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PVGFKKPADAPSSMF*DTRNWSSDSELESE Trigger: TTCAGACTCCAGTTCAGAGTCGGAAGACCAGTTCCTGGTGTCCAAGAACATGCTCGAGGGCGCATCTGCTGGCTTCTTAAAGCCAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 72 bp | AGCTCAGCTGACAGTTTCTCTGAAAAGGTGACCTCCTaGATCATGACACTGCAGTGGCCATCGCTGACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSADSFSEKVTS*IMTLQWPSLTD Trigger: GTCAGTCAGCGATGGCCACTGCAGTGTCATGATGCAGGAGGTCACCTTTTCAGAGAAACTGTCAGCTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 72 bp | TTTAAGAAGCCAGCAGATGCGCCCTCGAGCATGTTCTaGGACACCAGGAACTGGTCTTCCGACTCTGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: FKKPADAPSSMF*DTRNWSSDSEL Trigger: CAGTTCAGAGTCGGAAGACCAGTTCCTGGTGTCCAAGAACATGCTCGAGGGCGCATCTGCTGGCTTCTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 90 bp | AAGGTAAAGCCAGGCTTTGAGGCCTGCCTGTTGGCAGCTGCAGTCTaGGTAGCAGGTGCATCTTTCAACAGCTCAGCTGACAGTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KVKPGFEACLLAAAV*VAGASFNSSADSFS Trigger: AGAGAAACTGTCAGCTGAGCTGTTGAAAGATGCACCTGCTACCAAGACTGCAGCTGCCAACAGGCAGGCCTCAAAGCCTGGCTTTACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS CAA 90 bp | TGGAGGCCCTGGTCTGCTTCTTCGGTTCACACTTCTCCTTTCTTTTaGAAGACTTCTTTTTGGTCTCTTCCTCATCCTCTTCGGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WRPWSASSVHTSPFF*KTSFWSLPHPLRLG Trigger: GCCCAGCCGAAGAGGATGAGGAAGAGACCAAAAAGAAGTCTTCAAAAAGAAAGGAGAAGTGTGAACCGAAGAAGCAGACCAGGGCCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
||
| CDS GCA 72 bp | TCTTTTTGGTCTCTTCCTCATCCTCTTCGGCTGGGCTaGCTGTCACTTTGCTCTTTTTCTTGCTCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SFWSLPHPLRLG*LSLCSFSCSLS Trigger: GGACAAAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCCCAGCCGAAGAGGATGAGGAAGAGACCAAAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS GCA 72 bp | GGCGTCTGTTGTTTGGAAGACTTGGAGGCCCTGGTCTaGTTCTTCGGTTCACACTTCTCCTTTCTTTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GVCCLEDLEALV*FFGSHFSFLFE Trigger: TTCAAAAAGAAAGGAGAAGTGTGAACCGAAGAAGCAGACCAGGGCCTCCAAGTCTTCCAAACAACAGACGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS CAA 90 bp | TGCTTCTTCGGTTCACACTTCTCCTTTCTTTTTGAAGACTTCTTTTaGGTCTCTTCCTCATCCTCTTCGGCTGGGCTGCCTGTCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: CFFGSHFSFLFEDFF*VSSSSSSAGLPVTL Trigger: CAAAGTGACAGGCAGCCCAGCCGAAGAGGATGAGGAAGAGACCAAAAAGAAGTCTTCAAAAAGAAAGGAGAAGTGTGAACCGAAGAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS CCA 72 bp | AGACTTCTTTTTGGTCTCTTCCTCATCCTCTTCGGCTaGGCTGCCTGTCACTTTGCTCTTTTTCTTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RLLFGLFLILFG*AACHFALFLAL Trigger: AAGAGCAAGAAAAAGAGCAAAGTGACAGGCAGCCCAGCCGAAGAGGATGAGGAAGAGACCAAAAAGAAGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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| CDS CCA 72 bp | CATCAACTTAAAAGCCCGTTTCTTTGCTTTCCTGCATaGGAAACTAGAGTCGCCACCATTGCTTACTATCAG | + |
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Preference number: 6 (lower is better) Translates to: HQLKSPFLCFPA*ETRVATIAYYQ Trigger: CTGATAGTAAGCAATGGTGGCGACTCTAGTTTCCCATGCAGGAAAGCAAAGAAACGGGCTTTTAAGTTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036649.8 ENSMUST00000107898.8 |
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