RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COG8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031916

Ensembl transcript IDs: ENSMUST00000034391.4, ENSMUST00000095517.12, ENSMUST00000134772.2

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTAGGAGCGCGTGCGCGCCGGGCCCTCCAAGGCGGCCAAGGAGCTaGACCTCTGCGCCCGGCTCCCCGGAACCCACGCCGGCCGCGGCA +
Preference number: 1 (lower is better)
Translates to: SRSACAPGPPRRPRS*TSAPGSPEPTPAAA
Trigger: TGCCGCGGCCGGCGTGGGTTCCGGGGAGCCGGGCGCAGAGGTGCAGCTCCTTGGCCGCCTTGGAGGGCCCGGCGCGCACGCGCTCCTACT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 90 bp ACCTCTGCGCCCGGCTCCCCGGAACCCACGCCGGCCGCGGCAGCCTaGCCAGCAGCAACATGGCGCGGGGAGACGCCGCGGCCCTTCCTT +
Preference number: 1 (lower is better)
Translates to: TSAPGSPEPTPAAAA*PAATWRGETPRPFL
Trigger: AAGGAAGGGCCGCGGCGTCTCCCCGCGCCATGTTGCTGCTGGGCAGGCTGCCGCGGCCGGCGTGGGTTCCGGGGAGCCGGGCGCAGAGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 90 bp GGGGCCGCCACGACGCGCAGCACCGGGTCCCCGACCTGGCACACGTaGGCGTATGGCGGCTGCGGCGCGCCACATACAAGGCGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: GAATTRSTGSPTWHT*AYGGCGAPHTRRLR
Trigger: CCTCAGGCGCCTTGTATGTGGCGCGCCGCAGCCGCCATACGCGCACGTGTGCCAGGTCGGGGACCCGGTGCTGCGCGTCGTGGCGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 90 bp TCCCCGGAACCCACGCCGGCCGCGGCAGCCTGCCCAGCAGCAACATaGCGCGGGGAGACGCCGCGGCCCTTCCTTCCGCTAGCGCCAAAG +
Preference number: 1 (lower is better)
Translates to: SPEPTPAAAACPAAT*RGETPRPFLPLAPK
Trigger: CTTTGGCGCTAGCGGAAGGAAGGGCCGCGGCGTCTCCCCGCGCCATGTTGCTGCTGGGCAGGCTGCCGCGGCCGGCGTGGGTTCCGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 90 bp GGTTCCACCGGGGCCGCCACGACGCGCAGCACCGGGTCCCCGACCTaGCACACGTGCGCGTATGGCGGCTGCGGCGCGCCACATACAAGG +
Preference number: 1 (lower is better)
Translates to: GSTGAATTRSTGSPT*HTCAYGGCGAPHTR
Trigger: CCTTGTATGTGGCGCGCCGCAGCCGCCATACGCGCACGTGTGCCAGGTCGGGGACCCGGTGCTGCGCGTCGTGGCGGCCCCGGTGGAACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 90 bp ACACGTGCGCGTATGGCGGCTGCGGCGCGCCACATACAAGGCGCCTaGGGTACCGCCAGTAGGAGCGCGTGCGCGCCGGGCCCTCCAAGG +
Preference number: 1 (lower is better)
Translates to: TRARMAAAARHIQGA*GTASRSACAPGPPR
Trigger: CCTTGGAGGGCCCGGCGCGCACGCGCTCCTACTGGCGGTACCTCAGGCGCCTTGTATGTGGCGCGCCGCAGCCGCCATACGCGCACGTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 90 bp CACGACGCGCAGCACCGGGTCCCCGACCTGGCACACGTGCGCGTATaGCGGCTGCGGCGCGCCACATACAAGGCGCCTGAGGTACCGCCA +
Preference number: 1 (lower is better)
Translates to: HDAQHRVPDLAHVRV*RLRRATYKAPEVPP
Trigger: TGGCGGTACCTCAGGCGCCTTGTATGTGGCGCGCCGCAGCCGCCATACGCGCACGTGTGCCAGGTCGGGGACCCGGTGCTGCGCGTCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 90 bp AGCTGCGGCGCACTAAGGCCCACACAGCCACGCCGTCGCATTACCTaGACCATCCGCCCCACCAGCCGCTGCAGCTCCGGCCCCGCTAGC +
Preference number: 1 (lower is better)
Translates to: SCGALRPTQPRRRIT*TIRPTSRCSSGPAS
Trigger: GCTAGCGGGGCCGGAGCTGCAGCGGCTGGTGGGGCGGATGGTGCAGGTAATGCGACGGCGTGGCTGTGTGGGCCTTAGTGCGCCGCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 90 bp GAGAAGGCTCGGAGGAGCTTGTCCGGGAACTCGAGCGCCAACACTTaGAGCGGCACCCCGAGCTGCGGCGCACTAAGGCCCACACAGCCA +
Preference number: 1 (lower is better)
Translates to: EKARRSLSGNSSANT*SGTPSCGALRPTQP
Trigger: TGGCTGTGTGGGCCTTAGTGCGCCGCAGCTCGGGGTGCCGCTGCAAGTGTTGGCGCTCGAGTTCCCGGACAAGCTCCTCCGAGCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 90 bp AGCCAGAGAGAGCAAGACCACCCCGCTGCCCACGTCCCCTGCACCTaGGATCTGCACGGCTTGGAAGCGAGGCACACACGCCAGAAAGCC +
Preference number: 1 (lower is better)
Translates to: SQREQDHPAAHVPCT*DLHGLEARHTRQKA
Trigger: GGCTTTCTGGCGTGTGTGCCTCGCTTCCAAGCCGTGCAGATCTCAGGTGCAGGGGACGTGGGCAGCGGGGTGGTCTTGCTCTCTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 90 bp CTCAGACTGGGGTTCACCAGCACCCGAAGTGGGAAGGGTTCCATCTaGCGCAGTTCGCGCAGGCGCGGTGAGAAGGCTCGGAGGAGCTTG +
Preference number: 1 (lower is better)
Translates to: LRLGFTSTRSGKGSI*RSSRRRGEKARRSL
Trigger: CAAGCTCCTCCGAGCCTTCTCACCGCGCCTGCGCGAACTGCGTCAGATGGAACCCTTCCCACTTCGGGTGCTGGTGAACCCCAGTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 90 bp CACACGCCAGAAAGCCGGCGACACTCTCGCAGCCCTCGGGGAAGGTaGCCAAGCGGCTGTCCAACACTCTCAGACTGGGGTTCACCAGCA +
Preference number: 1 (lower is better)
Translates to: HTPESRRHSRSPRGR*PSGCPTLSDWGSPA
Trigger: TGCTGGTGAACCCCAGTCTGAGAGTGTTGGACAGCCGCTTGGTCACCTTCCCCGAGGGCTGCGAGAGTGTCGCCGGCTTTCTGGCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 90 bp ATGCTGGATGATTCGAGCTGTCCAACCACTTGCCGACCACACCACTaGCTCTCCTTTTGGGTCCAGTCCTTCCCGCTGCAGAAGCGCGTA +
Preference number: 1 (lower is better)
Translates to: MLDDSSCPTTCRPHH*LSFWVQSFPLQKRV
Trigger: TACGCGCTTCTGCAGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCTCGAATCATCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
3UTR CCA 90 bp TCGAGCTGTCCAACCACTTGCCGACCACACCACTGGCTCTCCTTTTaGGTCCAGTCCTGCAAAGGAAGTTACAGGCTCGATGAGGTGAGG +
Preference number: 1 (lower is better)
Translates to: SSCPTTCRPHHWLSF*VQSCKGSYRLDEVR
Trigger: CCTCACCTCATCGAGCCTGTAACTTCCTTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 90 bp CAAGTGATCCATCTCATGCTGGATGATTCGAGCTGTCCAACCACTTaGCGACCACACCACTGGCTCTCCTTTTGGGTCCAGTCCTTCCCG +
Preference number: 1 (lower is better)
Translates to: QVIHLMLDDSSCPTT*RPHHWLSFWVQSFP
Trigger: CGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCTCGAATCATCCAGCATGAGATGGATCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
3UTR CCA 90 bp ATGACACGGAGGCAGGCTGGGAGCTGGATGTTAGTCCTCAGTTGTTaGATCAGCTGGCTTAGCATCAGCTGCATGGACTGGCGCACTTCA +
Preference number: 1 (lower is better)
Translates to: MTRRQAGSWMLVLSC*ISWLSISCMDWRTS
Trigger: TGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCAGCTGATCCAACAACTGAGGACTAACATCCAGCTCCCAGCCTGCCTCCGTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR CCA 90 bp ATGCTGGATGATTCGAGCTGTCCAACCACTTGCCGACCACACCACTaGCTCTCCTTTTGGGTCCAGTCCTGCAAAGGAAGTTACAGGCTC +
Preference number: 1 (lower is better)
Translates to: MLDDSSCPTTCRPHH*LSFWVQSCKGSYRL
Trigger: GAGCCTGTAACTTCCTTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCTCGAATCATCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 90 bp GTCCTCAGTTGTTGGATCAGCTGGCTTAGCATCAGCTGCATGGACTaGCGCACTTCATTCACAATGCCCTGGATAACGGGGATGGAGGAG +
Preference number: 1 (lower is better)
Translates to: VLSCWISWLSISCMD*RTSFTMPWITGMEE
Trigger: CTCCTCCATCCCCGTTATCCAGGGCATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCAGCTGATCCAACAACTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR GCA 90 bp CAAGTGATCCATCTCATGCTGGATGATTCGAGCTGTCCAACCACTTaGCGACCACACCACTGGCTCTCCTTTTGGGTCCAGTCCTGCAAA +
Preference number: 1 (lower is better)
Translates to: QVIHLMLDDSSCPTT*RPHHWLSFWVQSCK
Trigger: TTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCTCGAATCATCCAGCATGAGATGGATCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 90 bp CTTAGCATCAGCTGCATGGACTGGCGCACTTCATTCACAATGCCCTaGATAACGGGGATGGAGGAGTACTTCCTTTCCAGTCGCCGTACA +
Preference number: 1 (lower is better)
Translates to: LSISCMDWRTSFTMP*ITGMEEYFLSSRRT
Trigger: TGTACGGCGACTGGAAAGGAAGTACTCCTCCATCCCCGTTATCCAGGGCATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGATGCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR CCA 90 bp AGGCAGGCTGGGAGCTGGATGTTAGTCCTCAGTTGTTGGATCAGCTaGCTTAGCATCAGCTGCATGGACTGGCGCACTTCATTCACAATG +
Preference number: 1 (lower is better)
Translates to: RQAGSWMLVLSCWIS*LSISCMDWRTSFTM
Trigger: CATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCAGCTGATCCAACAACTGAGGACTAACATCCAGCTCCCAGCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR TCA 90 bp CCTTTTGGGTCCAGTCCTGCAAAGGAAGTTACAGGCTCGATGAGGTaGGGCTTTGCTGAACTCATGCCCAACCTCCTGTCCCTACTTTGT +
Preference number: 1 (lower is better)
Translates to: PFGSSPAKEVTGSMR*GFAELMPNLLSLLC
Trigger: ACAAAGTAGGGACAGGAGGTTGGGCATGAGTTCAGCAAAGCCTCACCTCATCGAGCCTGTAACTTCCTTTGCAGGACTGGACCCAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 90 bp GTGTCCATAAGCTGGGGTATCTCTAAAATCTCCAGGATTTCTGTGTaGCGGTTTAGAGTCAGCGTGTTCATGCGGCGGCTGGAGCTGATC +
Preference number: 1 (lower is better)
Translates to: VSISWGISKISRISV*RFRVSVFMRRLELI
Trigger: GATCAGCTCCAGCCGCCGCATGAACACGCTGACTCTAAACCGGCACACAGAAATCCTGGAGATTTTAGAGATACCCCAGCTTATGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR GCA 90 bp TGGATGTTAGTCCTCAGTTGTTGGATCAGCTGGCTTAGCATCAGCTaGATGGACTGGCGCACTTCATTCACAATGCCCTGGATAACGGGG +
Preference number: 1 (lower is better)
Translates to: WMLVLSCWISWLSIS*MDWRTSFTMPWITG
Trigger: CCCCGTTATCCAGGGCATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCAGCTGATCCAACAACTGAGGACTAACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR CCA 90 bp TCTTTTCAAGGGCTGTTTATCAAAGGTATTTCATGCCAGGCATGGTaGCACACACCTTTTAATCCCAGCACTCAGGAGGTAGAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: SFQGLFIKGISCQAW*HTPFNPSTQEVEAG
Trigger: GCCTGCCTCTACCTCCTGAGTGCTGGGATTAAAAGGTGTGTGCCACCATGCCTGGCATGAAATACCTTTGATAAACAGCCCTTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 90 bp GGCCATGCCTATTTATATCCTATCTACAGAGGCAGCATCCAAGAGTaGATGTGGATAACAGCTCTTATCCCTCCTAGAAAGGGTACCCCA +
Preference number: 1 (lower is better)
Translates to: GHAYLYPIYRGSIQE*MWITALIPPRKGTP
Trigger: TGGGGTACCCTTTCTAGGAGGGATAAGAGCTGTTATCCACATTCACTCTTGGATGCTGCCTCTGTAGATAGGATATAAATAGGCATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 90 bp GCTGATCTCCTCAGCTTCCTTCACAAAGTTCCTAGATGGCTGCTGTaGAGTTTAAGTGGATTAACAAGGCAATCAGGAGAGAGCCCTGTA +
Preference number: 1 (lower is better)
Translates to: ADLLSFLHKVPRWLL*SLSGLTRQSGESPV
Trigger: TACAGGGCTCTCTCCTGATTGCCTTGTTAATCCACTTAAACTTCACAGCAGCCATCTAGGAACTTTGTGAAGGAAGCTGAGGAGATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR CCA 90 bp ACGATAAACTGGGAAAATCGTGTGTGCAATACAGACACACTTACATaGGAATCTATATACCTACTCATGAGAAAGGGGAAAGACAGGCTC +
Preference number: 1 (lower is better)
Translates to: TINWENRVCNTDTLT*ESIYLLMRKGKDRL
Trigger: GAGCCTGTCTTTCCCCTTTCTCATGAGTAGGTATATAGATTCCCATGTAAGTGTGTCTGTATTGCACACACGATTTTCCCAGTTTATCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR GCA 90 bp TTAGCCTACGATTGCCAACAGAGTGCTGGAATTAAAGGTGTGCCACCACACTCAAAGGAGCTGCACCTCTaGGCCCGGCTCCCCGGAACC +
Preference number: 2 (lower is better)
Translates to: LAYDCQQSAGIKGVPPHSKELHL*ARLPGT
Trigger: GGTTCCGGGGAGCCGGGCGCAGAGGTGCAGCTCCTT...TGAGTGTGGTGGCACACCTTTAATTCCAGCACTCTGTTGGCAATCGTAGGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR CCA 90 bp CTTGCCGACCACACCACTGGCTCTCCTTTTGGGTCCAGTCCTGCAAAGGAAGTTTGCCGACCACACCACTaGCTCTCCTTTTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: LADHTTGSPFGSSPAKEVCRPHH*LSFWVQ
Trigger: CTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCA...AACTTCCTTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR TCA 90 bp ACACTCTCAGACTGGGGTTCACCAGCACCCGAAGTGGGAAGGGTTCCATCTGACAAGCAGCCCTGCAAGTaGTCCATCTCATGCTGGATG +
Preference number: 2 (lower is better)
Translates to: TLSDWGSPAPEVGRVPSDKQPCK*SISCWM
Trigger: CATCCAGCATGAGATGGATCACTTGCAGGGCTGCTT...GTCAGATGGAACCCTTCCCACTTCGGGTGCTGGTGAACCCCAGTCTGAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR CCA 90 bp GAATGTGTCTCATTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGACACTGGCTCTCCTTTTaGGTCCAGTCCTTCCCGCTG +
Preference number: 2 (lower is better)
Translates to: ECVSFVQRMFACPLLSMGHWLSF*VQSFPL
Trigger: CAGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTG...TCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAATGAGACACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
3UTR-3UTR CCA 90 bp TGTCTACAGAGTGAGTTCCACGACAGCCAAGGCTACACAGAGAAACCCTGTTTCTGCCGACCACACCACTaGCTCTCCTTTTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: CLQSEFHDSQGYTEKPCFCRPHH*LSFWVQ
Trigger: CTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCA...GAAACAGGGTTTCTCTGTGTAGCCTTGGCTGTCGTGGAACTCACTCTGTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR-3UTR GCA 90 bp TCAGGAGTACAGAGGCAGGTATATCTCTTAAGTTTGAGGCCAGCTTGTCTACAGAGCTGTCCAACCACTTaGCGACCACACCACTGGCTC +
Preference number: 2 (lower is better)
Translates to: SGVQRQVYLLSLRPACLQSCPTT*RPHHWL
Trigger: GAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCT...CTGTAGACAAGCTGGCCTCAAACTTAAGAGATATACCTGCCTCTGTACTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR-3UTR CCA 90 bp ATTATGTTTCTGTGTAAGTTTATACACAAAACAATACCTGCAGAGGCCAGGAGGACCGGGTCCCCGACCTaGCACACGTGCGCGTATGGC +
Preference number: 2 (lower is better)
Translates to: IMFLCKFIHKTIPAEARRTGSPT*HTCAYG
Trigger: GCCATACGCGCACGTGTGCCAGGTCGGGGACCCGGT...CCTCCTGGCCTCTGCAGGTATTGTTTTGTGTATAAACTTACACAGAAACATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR GCA 90 bp AATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCAAGCTGTCCAACCACTTaGCGACCACACCACTGGCTC +
Preference number: 2 (lower is better)
Translates to: NSKLKHRCDHLSLHAGFPSCPTT*RPHHWL
Trigger: GAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCT...TGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR-3UTR TCA 90 bp ACTGGAACCAATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTAAGCAGCCCTGCAAGTaGTCCATCTCATGCTGGATG +
Preference number: 2 (lower is better)
Translates to: TGTNSKLKHRCDHLSLHAKQPCK*SISCWM
Trigger: CATCCAGCATGAGATGGATCACTTGCAGGGCTGCTT...AGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATTGGTTCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR-3UTR TCA 90 bp ATCAGCTGCATGGACTGGCGCACTTCATTCACAATGCCCTGGATAACGGGGATGCCTAGATGGCTGCTGTaGAGTTTAAGTGGATTAACA +
Preference number: 2 (lower is better)
Translates to: ISCMDWRTSFTMPWITGMPRWLL*SLSGLT
Trigger: TGTTAATCCACTTAAACTTCACAGCAGCCATCTAGG...CATCCCCGTTATCCAGGGCATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR-3UTR CCA 90 bp CACTACTACAGGGCAAGGATAAGAAATCAAAACTCTTTTCAAGGGCTGTTTATCGAGATCTGCACGGCTTaGAAGCGAGGCACACACGCC +
Preference number: 2 (lower is better)
Translates to: HYYRARIRNQNSFQGLFIEICTA*KRGTHA
Trigger: GGCGTGTGTGCCTCGCTTCCAAGCCGTGCAGATCTC...GATAAACAGCCCTTGAAAAGAGTTTTGATTTCTTATCCTTGCCCTGTAGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR CCA 90 bp AGCTGGATGTTAGTCCTCAGTTGTTGGATCAGCTGGCTTAGCATCAGCTGCATGCACGTGTCCATAAGCTaGGGTATCTCTAAAATCTCC +
Preference number: 2 (lower is better)
Translates to: SWMLVLSCWISWLSISCMHVSIS*GISKIS
Trigger: GGAGATTTTAGAGATACCCCAGCTTATGGACACGTG...CATGCAGCTGATGCTAAGCCAGCTGATCCAACAACTGAGGACTAACATCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR-3UTR TCA 90 bp AGGCGGCACTTAATTCCCTGGAGCTGGAGGTATAGATGTAGTGAGTTGATTGATGAACCAATTCCAAGCTaGAGCACAGATGTGACCATC +
Preference number: 2 (lower is better)
Translates to: RRHLIPWSWRYRCSELIDEPIPS*STDVTI
Trigger: GATGGTCACATCTGTGCTTCAGCTTGGAATTGGTTC...ATCAATCAACTCACTACATCTATACCTCCAGCTCCAGGGAATTAAGTGCCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR-3UTR CCA 90 bp CCTTCAGTCCCAAAGCTCAGGAGTACAGAGGCAGGTATATCTCTTAAGTTTGAGCGGCACTTAATTCCCTaGAGCTGGAGGTATAGATGT +
Preference number: 2 (lower is better)
Translates to: PSVPKLRSTEAGISLKFERHLIP*SWRYRC
Trigger: ACATCTATACCTCCAGCTCCAGGGAATTAAGTGCCG...CTCAAACTTAAGAGATATACCTGCCTCTGTACTCCTGAGCTTTGGGACTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR-3UTR TCA 90 bp AGATGTGACCATCTTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGAGTGTCCATTTTGTCGATaGACAAGCAGCCCTGCAAGT +
Preference number: 2 (lower is better)
Translates to: RCDHLSLHAGFPDPQFKECPFCR*TSSPAS
Trigger: ACTTGCAGGGCTGCTTGTTCATCGACAAAATGGACA...CTCCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAAGATGGTCACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR-3UTR GCA 90 bp CCTTCAGTCCCAAAGCTCAGGAGTACAGAGGCAGGTATATCTCTTAAGTTTGAGATCAAAGGTATTTCATaGCAGGCATGGTGGCACACA +
Preference number: 2 (lower is better)
Translates to: PSVPKLRSTEAGISLKFEIKGIS*QAWWHT
Trigger: TGTGTGCCACCATGCCTGGCATGAAATACCTTTGAT...CTCAAACTTAAGAGATATACCTGCCTCTGTACTCCTGAGCTTTGGGACTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR CCA 90 bp CTATTTATATCCTATCTACAGAGGCAGCATCCAAGAGTGAATGTGGATAACAGCGGAACAGCAGGCGAGTaGCGACAGTTGTCGGTTTTA +
Preference number: 2 (lower is better)
Translates to: LFISYLQRQHPRVNVDNSGTAGE*RQLSVL
Trigger: TAAAACCGACAACTGTCGCCACTCGCCTGCTGTTCC...GCTGTTATCCACATTCACTCTTGGATGCTGCCTCTGTAGATAGGATATAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR GCA 90 bp TTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGAGAGTGTTAGTCATTCCCTACTTTGTTTCCTaGCCTGGCCATGCCTATTTA +
Preference number: 2 (lower is better)
Translates to: LVCMLDFQILNSRRVLVIPYFVS*PGHAYL
Trigger: TAAATAGGCATGGCCAGGGCAGGAAACAAAGTAGGG...AATGACTAACACTCTCCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR TCA 90 bp ATTATGTTTCTGTGTAAGTTTATACACAAAACAATACCTGCAGAGGCCAGGAGGTGTCCATTTTGTCGATaGACAAGCAGCCCTGCAAGT +
Preference number: 2 (lower is better)
Translates to: IMFLCKFIHKTIPAEARRCPFCR*TSSPAS
Trigger: ACTTGCAGGGCTGCTTGTTCATCGACAAAATGGACA...CCTCCTGGCCTCTGCAGGTATTGTTTTGTGTATAAACTTACACAGAAACATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR-3UTR CCA 90 bp AGACTGCATTTTAAGACAACTTTCAAGTCCAGCAGTAGTGTGATACACCTTCAGTTCACCTCCATCCAGTaGAGATTGGTAAATGTCCCA +
Preference number: 2 (lower is better)
Translates to: RLHFKTTFKSSSSVIHLQFTSIQ*RLVNVP
Trigger: TGGGACATTTACCAATCTCCACTGGATGGAGGTGAA...CTGAAGGTGTATCACACTACTGCTGGACTTGAAAGTTGTCTTAAAATGCAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR CCA 72 bp GGGGCCGCCACGACGCGCAGCACCGGGTCCCCGACCTaGCACACGTGCGCGTATGGCGGCTGCGGCGCGCCA +
Preference number: 3 (lower is better)
Translates to: GAATTRSTGSPT*HTCAYGGCGAP
Trigger: TGGCGCGCCGCAGCCGCCATACGCGCACGTGTGCCAGGTCGGGGACCCGGTGCTGCGCGTCGTGGCGGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 72 bp GGGTCCCCGACCTGGCACACGTGCGCGTATGGCGGCTaGGGCGCGCCACATACAAGGCGCCTGAGGTACCGC +
Preference number: 3 (lower is better)
Translates to: GSPTWHTCAYGG*GAPHTRRLRYR
Trigger: GCGGTACCTCAGGCGCCTTGTATGTGGCGCGCCGCAGCCGCCATACGCGCACGTGTGCCAGGTCGGGGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 72 bp ACGACGCGCAGCACCGGGTCCCCGACCTGGCACACGTaGGCGTATGGCGGCTGCGGCGCGCCACATACAAGG +
Preference number: 3 (lower is better)
Translates to: TTRSTGSPTWHT*AYGGCGAPHTR
Trigger: CCTTGTATGTGGCGCGCCGCAGCCGCCATACGCGCACGTGTGCCAGGTCGGGGACCCGGTGCTGCGCGTCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 72 bp CAGCACCGGGTCCCCGACCTGGCACACGTGCGCGTATaGCGGCTGCGGCGCGCCACATACAAGGCGCCTGAG +
Preference number: 3 (lower is better)
Translates to: QHRVPDLAHVRV*RLRRATYKAPE
Trigger: CTCAGGCGCCTTGTATGTGGCGCGCCGCAGCCGCCATACGCGCACGTGTGCCAGGTCGGGGACCCGGTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 72 bp CGTCGCATTACCTGCACCATCCGCCCCACCAGCCGCTaGAGCTCCGGCCCCGCTAGCTGCTCGGGTTCCACC +
Preference number: 3 (lower is better)
Translates to: RRITCTIRPTSR*SSGPASCSGST
Trigger: GGTGGAACCCGAGCAGCTAGCGGGGCCGGAGCTGCAGCGGCTGGTGGGGCGGATGGTGCAGGTAATGCGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 72 bp GCACTAAGGCCCACACAGCCACGCCGTCGCATTACCTaGACCATCCGCCCCACCAGCCGCTGCAGCTCCGGC +
Preference number: 3 (lower is better)
Translates to: ALRPTQPRRRIT*TIRPTSRCSSG
Trigger: GCCGGAGCTGCAGCGGCTGGTGGGGCGGATGGTGCAGGTAATGCGACGGCGTGGCTGTGTGGGCCTTAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 72 bp GAGCAAGACCACCCCGCTGCCCACGTCCCCTGCACCTaGGATCTGCACGGCTTGGAAGCGAGGCACACACGC +
Preference number: 3 (lower is better)
Translates to: EQDHPAAHVPCT*DLHGLEARHTR
Trigger: GCGTGTGTGCCTCGCTTCCAAGCCGTGCAGATCTCAGGTGCAGGGGACGTGGGCAGCGGGGTGGTCTTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 72 bp GGGTTCACCAGCACCCGAAGTGGGAAGGGTTCCATCTaGCGCAGTTCGCGCAGGCGCGGTGAGAAGGCTCGG +
Preference number: 3 (lower is better)
Translates to: GFTSTRSGKGSI*RSSRRRGEKAR
Trigger: CCGAGCCTTCTCACCGCGCCTGCGCGAACTGCGTCAGATGGAACCCTTCCCACTTCGGGTGCTGGTGAACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 72 bp CTGCCCACGTCCCCTGCACCTGAGATCTGCACGGCTTaGAAGCGAGGCACACACGCCAGAAAGCCGGCGACA +
Preference number: 3 (lower is better)
Translates to: LPTSPAPEICTA*KRGTHARKPAT
Trigger: TGTCGCCGGCTTTCTGGCGTGTGTGCCTCGCTTCCAAGCCGTGCAGATCTCAGGTGCAGGGGACGTGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 72 bp GAAGGGTTCCATCTGACGCAGTTCGCGCAGGCGCGGTaGGAAGGCTCGGAGGAGCTTGTCCGGGAACTCGAG +
Preference number: 3 (lower is better)
Translates to: EGFHLTQFAQAR*EGSEELVRELE
Trigger: CTCGAGTTCCCGGACAAGCTCCTCCGAGCCTTCTCACCGCGCCTGCGCGAACTGCGTCAGATGGAACCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 72 bp GAAAGCCGGCGACACTCTCGCAGCCCTCGGGGAAGGTaGCCAAGCGGCTGTCCAACACTCTCAGACTGGGGT +
Preference number: 3 (lower is better)
Translates to: ESRRHSRSPRGR*PSGCPTLSDWG
Trigger: ACCCCAGTCTGAGAGTGTTGGACAGCCGCTTGGTCACCTTCCCCGAGGGCTGCGAGAGTGTCGCCGGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 72 bp CCAACCACTTGCCGACCACACCACTGGCTCTCCTTTTaGGTCCAGTCCTTCCCGCTGCAGAAGCGCGTACCC +
Preference number: 3 (lower is better)
Translates to: PTTCRPHHWLSF*VQSFPLQKRVP
Trigger: GGGTACGCGCTTCTGCAGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
3UTR CCA 72 bp CAACACTCTCAGACTGGGGTTCACCAGCACCCGAAGTaGGAAGGGTTCCATCTGACGCAGTTCGCGCAGGCG +
Preference number: 3 (lower is better)
Translates to: QHSQTGVHQHPK*EGFHLTQFAQA
Trigger: CGCCTGCGCGAACTGCGTCAGATGGAACCCTTCCCACTTCGGGTGCTGGTGAACCCCAGTCTGAGAGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 72 bp GATTCGAGCTGTCCAACCACTTGCCGACCACACCACTaGCTCTCCTTTTGGGTCCAGTCCTTCCCGCTGCAG +
Preference number: 3 (lower is better)
Translates to: DSSCPTTCRPHH*LSFWVQSFPLQ
Trigger: CTGCAGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCTCGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
3UTR TCA 72 bp TCTAAGGAATCACCCTGCAACCCATCTAGGCGGGCCTaGCCTGCTCTTCAGGAGTTCAGTTGGCTCCCGAGT +
Preference number: 3 (lower is better)
Translates to: SKESPCNPSRRA*PALQEFSWLPS
Trigger: ACTCGGGAGCCAACTGAACTCCTGAAGAGCAGGTCAGGCCCGCCTAGATGGGTTGCAGGGTGATTCCTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 72 bp CATCTCATGCTGGATGATTCGAGCTGTCCAACCACTTaGCGACCACACCACTGGCTCTCCTTTTGGGTCCAG +
Preference number: 3 (lower is better)
Translates to: HLMLDDSSCPTT*RPHHWLSFWVQ
Trigger: CTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCTCGAATCATCCAGCATGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR CCA 72 bp ATTAAAGCTGCAAATACCACAGGGCCCGCGCTATCCTaGGCAAAGCAACTGCACACACCTTCCCGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: IKAANTTGPALS*AKQLHTPSRCR
Trigger: TCTGCAGCGGGAAGGTGTGTGCAGTTGCTTTGCCCAGGATAGCGCGGGCCCTGTGGTATTTGCAGCTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 72 bp GATTCGAGCTGTCCAACCACTTGCCGACCACACCACTaGCTCTCCTTTTGGGTCCAGTCCTGCAAAGGAAGT +
Preference number: 3 (lower is better)
Translates to: DSSCPTTCRPHH*LSFWVQSCKGS
Trigger: ACTTCCTTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGGACAGCTCGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 72 bp AGGCAGGCTGGGAGCTGGATGTTAGTCCTCAGTTGTTaGATCAGCTGGCTTAGCATCAGCTGCATGGACTGG +
Preference number: 3 (lower is better)
Translates to: RQAGSWMLVLSC*ISWLSISCMDW
Trigger: CCAGTCCATGCAGCTGATGCTAAGCCAGCTGATCCAACAACTGAGGACTAACATCCAGCTCCCAGCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR CCA 72 bp CATGCGCCGAAGATAGCCTATGACACGGAGGCAGGCTaGGAGCTGGATGTTAGTCCTCAGTTGTTGGATCAG +
Preference number: 3 (lower is better)
Translates to: HAPKIAYDTEAG*ELDVSPQLLDQ
Trigger: CTGATCCAACAACTGAGGACTAACATCCAGCTCCCAGCCTGCCTCCGTGTCATAGGCTATCTTCGGCGCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR TCA 72 bp ACAAGCAGCCCTGCAAGTGATCCATCTCATGCTGGATaGTTCGAGCTGTCCAACCACTTGCCGACCACACCA +
Preference number: 3 (lower is better)
Translates to: TSSPASDPSHAG*FELSNHLPTTP
Trigger: TGGTGTGGTCGGCAAGTGGTTGGACAGCTCGAATCATCCAGCATGAGATGGATCACTTGCAGGGCTGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR TCA 72 bp TCCAGTCCTGCAAAGGAAGTTACAGGCTCGATGAGGTaGGGCTTTGCTGAACTCATGCCCAACCTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: SSPAKEVTGSMR*GFAELMPNLLS
Trigger: GGACAGGAGGTTGGGCATGAGTTCAGCAAAGCCTCACCTCATCGAGCCTGTAACTTCCTTTGCAGGACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR GCA 72 bp GTCCTCAGTTGTTGGATCAGCTGGCTTAGCATCAGCTaGATGGACTGGCGCACTTCATTCACAATGCCCTGG +
Preference number: 3 (lower is better)
Translates to: VLSCWISWLSIS*MDWRTSFTMPW
Trigger: CCAGGGCATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCAGCTGATCCAACAACTGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR CCA 72 bp TGTTGGATCAGCTGGCTTAGCATCAGCTGCATGGACTaGCGCACTTCATTCACAATGCCCTGGATAACGGGG +
Preference number: 3 (lower is better)
Translates to: CWISWLSISCMD*RTSFTMPWITG
Trigger: CCCCGTTATCCAGGGCATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCAGCTGATCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR CCA 72 bp GGGAGCTGGATGTTAGTCCTCAGTTGTTGGATCAGCTaGCTTAGCATCAGCTGCATGGACTGGCGCACTTCA +
Preference number: 3 (lower is better)
Translates to: GSWMLVLSCWIS*LSISCMDWRTS
Trigger: TGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCAGCTGATCCAACAACTGAGGACTAACATCCAGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR-3UTR CAA 90 bp CTTGCCGACCACACCACTGGCTCTCCTTTTGGGTCCAGTCCTGCAAAGGAAGTTCCTCTCCATGGGAAATaGTCAGGAAATAGCCACTCC +
Preference number: 3 (lower is better)
Translates to: LADHTTGSPFGSSPAKEVPLHGK*SGNSHS
Trigger: GGAGTGGCTATTTCCTGACAATTTCCCATGGAGAGG...AACTTCCTTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR CAA 90 bp TGTCTACAGAGTGAGTTCCACGACAGCCAAGGCTACACAGAGAAACCCTGTTTCTCTTCAGGAGTTCAGTaGGCTCCCGAGTGCCGCTGT +
Preference number: 3 (lower is better)
Translates to: CLQSEFHDSQGYTEKPCFSSGVQ*APECRC
Trigger: ACAGCGGCACTCGGGAGCCAACTGAACTCCTGAAGA...GAAACAGGGTTTCTCTGTGTAGCCTTGGCTGTCGTGGAACTCACTCTGTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR CAA 90 bp TGTCTACAGAGTGAGTTCCACGACAGCCAAGGCTACACAGAGAAACCCTGTTTCCCACTGGCTCTCCTTTaGGGTCCAGTCCTGCAAAGG +
Preference number: 3 (lower is better)
Translates to: CLQSEFHDSQGYTEKPCFPLALL*GPVLQR
Trigger: CCTTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGG...GAAACAGGGTTTCTCTGTGTAGCCTTGGCTGTCGTGGAACTCACTCTGTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 72 bp AGCTGCATGGACTGGCGCACTTCATTCACAATGCCCTaGATAACGGGGATGGAGGAGTACTTCCTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: SCMDWRTSFTMP*ITGMEEYFLSS
Trigger: ACTGGAAAGGAAGTACTCCTCCATCCCCGTTATCCAGGGCATTGTGAATGAAGTGCGCCAGTCCATGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR-3UTR CAA 90 bp AATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCACCACTGGCTCTCCTTTaGGGTCCAGTCCTTCCCGCT +
Preference number: 3 (lower is better)
Translates to: NSKLKHRCDHLSLHAGFPPLALL*GPVLPA
Trigger: AGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGG...TGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
3UTR-3UTR CAA 90 bp TGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAATGTCCCACTGTCCATTTaGTCGATGAACAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: CTEDVCLPTPLHGKLSGNVPLSI*SMNKQP
Trigger: GGGCTGCTTGTTCATCGACAAAATGGACAGTGGGAC...ATTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR CCA 72 bp ATACCTGCAGAGGCCAGGAGGCGGCACTTAATTCCCTaGAGCTGGAGGTATAGATGTAGTGAGTTGATTGAT +
Preference number: 3 (lower is better)
Translates to: IPAEARRRHLIP*SWRYRCSELID
Trigger: ATCAATCAACTCACTACATCTATACCTCCAGCTCCAGGGAATTAAGTGCCGCCTCCTGGCCTCTGCAGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR CCA 72 bp ATGCCCAACCTCCTGTCCCTACTTTGTTTCCTGCCCTaGCCATGCCTATTTATATCCTATCTACAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: MPNLLSLLCFLP*PCLFISYLQRQ
Trigger: CTGCCTCTGTAGATAGGATATAAATAGGCATGGCCAGGGCAGGAAACAAAGTAGGGACAGGAGGTTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR-3UTR CAA 90 bp TTCTGTGTAAGTTTATACACAAAACAATACCTGCAGAGGCCAGGAGGCGGCACTTTGTACAGAGGATGTTaGCCTGCCCACTCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: FCVSLYTKQYLQRPGGGTLYRGC*PAHSSP
Trigger: TGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAA...AGTGCCGCCTCCTGGCCTCTGCAGGTATTGTTTTGTGTATAAACTTACACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR TCA 72 bp AAAGGAAGTTACAGGCTCGATGAGGTGAGGCTTTGCTaGACTCATGCCCAACCTCCTGTCCCTACTTTGTTT +
Preference number: 3 (lower is better)
Translates to: KGSYRLDEVRLC*THAQPPVPTLF
Trigger: AAACAAAGTAGGGACAGGAGGTTGGGCATGAGTTCAGCAAAGCCTCACCTCATCGAGCCTGTAACTTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 72 bp GCAGAGGCCAGGAGGCGGCACTTAATTCCCTGGAGCTaGAGGTATAGATGTAGTGAGTTGATTGATGTAAAT +
Preference number: 3 (lower is better)
Translates to: AEARRRHLIPWS*RYRCSELIDVN
Trigger: ATTTACATCAATCAACTCACTACATCTATACCTCCAGCTCCAGGGAATTAAGTGCCGCCTCCTGGCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR-3UTR CAA 90 bp CATGCTGGATTTCCAGATCCTCAATTCAAGGAGAGTGTTAGTCATTCACCTCCAGTCCCACTGTCCATTTaGTCGATGAACAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: HAGFPDPQFKESVSHSPPVPLSI*SMNKQP
Trigger: GGGCTGCTTGTTCATCGACAAAATGGACAGTGGGAC...TGGAGGTGAATGACTAACACTCTCCTTGAATTGAGGATCTGGAAATCCAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
3UTR GCA 72 bp AACTCATGCCCAACCTCCTGTCCCTACTTTGTTTCCTaGCCTGGCCATGCCTATTTATATCCTATCTACAGA +
Preference number: 3 (lower is better)
Translates to: NSCPTSCPYFVS*PGHAYLYPIYR
Trigger: TCTGTAGATAGGATATAAATAGGCATGGCCAGGGCAGGAAACAAAGTAGGGACAGGAGGTTGGGCATGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CCA 72 bp GTCCCACTTTCTTACACAAGCCCCACCACGATAAACTaGGAAAATCGTGTGTGCAATACAGACACACTTACA +
Preference number: 3 (lower is better)
Translates to: VPLSYTSPTTIN*ENRVCNTDTLT
Trigger: TGTAAGTGTGTCTGTATTGCACACACGATTTTCCCAGTTTATCGTGGTGGGGCTTGTGTAAGAAAGTGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 72 bp CTCAGCTTCCTTCACAAAGTTCCTAGATGGCTGCTGTaGAGTTTAAGTGGATTAACAAGGCAATCAGGAGAG +
Preference number: 3 (lower is better)
Translates to: LSFLHKVPRWLL*SLSGLTRQSGE
Trigger: CTCTCCTGATTGCCTTGTTAATCCACTTAAACTTCACAGCAGCCATCTAGGAACTTTGTGAAGGAAGCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR TCA 72 bp CAGACACACTTACATGGGAATCTATATACCTACTCATaGGAAAGGGGAAAGACAGGCTCCATATCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: QTHLHGNLYTYS*ERGKTGSISKE
Trigger: TTCCTTAGATATGGAGCCTGTCTTTCCCCTTTCTCATGAGTAGGTATATAGATTCCCATGTAAGTGTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR TCA 72 bp TATTTATATCCTATCTACAGAGGCAGCATCCAAGAGTaGATGTGGATAACAGCTCTTATCCCTCCTAGAAAG +
Preference number: 3 (lower is better)
Translates to: YLYPIYRGSIQE*MWITALIPPRK
Trigger: CTTTCTAGGAGGGATAAGAGCTGTTATCCACATTCACTCTTGGATGCTGCCTCTGTAGATAGGATATAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TCCGGCCCCGCTAGCTGCTCGGGTTCCACCGGGGCCGCCACGACGCGCAGCACCCTCGCCCATGGCAGGTaGCAGCAGGGGGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: SGPASCSGSTGAATTRSTLAHGR*QQGVLI
Trigger: GATGAGGACCCCCTGCTGCCACCTGCCATGGGCGAG...GGTGCTGCGCGTCGTGGCGGCCCCGGTGGAACCCGAGCAGCTAGCGGGGCCGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp GCTGCTCGGGTTCCACCGGGGCCGCCACGACGCGCAGCACCGGGTCCCCGACCTGCCGAAGATAGCCTATaGCACGGAGGCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AARVPPGPPRRAAPGPRPAEDSL*HGGRLG
Trigger: TCCCAGCCTGCCTCCGTGTCATAGGCTATCTTCGGC...AGGTCGGGGACCCGGTGCTGCGCGTCGTGGCGGCCCCGGTGGAACCCGAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp GCTGCTCGGGTTCCACCGGGGCCGCCACGACGCGCAGCACCGGGTCCCCGACCTGCCTGGTTGTGTGGCTaGTACTGTGGCAGGCGTGTT +
Preference number: 4 (lower is better)
Translates to: AARVPPGPPRRAAPGPRPAWLCG*YCGRRV
Trigger: AACACGCCTGCCACAGTACCAGCCACACAACCAGGC...AGGTCGGGGACCCGGTGCTGCGCGTCGTGGCGGCCCCGGTGGAACCCGAGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
3UTR CAA 72 bp TCGGAGGAGCTTGTCCGGGAACTCGAGCGCCAACACTaGCAGCGGCACCCCGAGCTGCGGCGCACTAAGGCC +
Preference number: 4 (lower is better)
Translates to: SEELVRELERQH*QRHPELRRTKA
Trigger: GGCCTTAGTGCGCCGCAGCTCGGGGTGCCGCTGCAAGTGTTGGCGCTCGAGTTCCCGGACAAGCTCCTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AGCTGCTCGGGTTCCACCGGGGCCGCCACGACGCGCAGCACCGGGTCCCCGACCCCAAAGTACATGCACTaGCCAAGCAGAGAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SCSGSTGAATTRSTGSPTPKYMH*PSRESK
Trigger: CTTGGACTCTCTGCTTGGCCAGTGCATGTACTTTGG...GGTCGGGGACCCGGTGCTGCGCGTCGTGGCGGCCCCGGTGGAACCCGAGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp GCGACACTCTCGCAGCCCTCGGGGAAGGTGACCAAGCGGCTGTCCAACACTCTCGCGGGCAGGGGACACTaGCTATGGCTCCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: ATLSQPSGKVTKRLSNTLAGRGH*LWLLPH
Trigger: GTGAGGGAGGAGCCATAGGCAGTGTCCCCTGCCCGC...GAGAGTGTTGGACAGCCGCTTGGTCACCTTCCCCGAGGGCTGCGAGAGTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp ACGCCGGCCGCGGCAGCCTGCCCAGCAGCAACATGGCGCGGGGAGACGCCGCGGATGATATCAAAGAGATaGACCCGGCAAGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TPAAAACPAATWRGETPRMISKR*TRQASM
Trigger: CATTGAGGCTTGCCGGGTCCATCTCTTTGATATCAT...CCGCGGCGTCTCCCCGCGCCATGTTGCTGCTGGGCAGGCTGCCGCGGCCGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp GCGACACTCTCGCAGCCCTCGGGGAAGGTGACCAAGCGGCTGTCCAACACTCTCCAGTGTACTCGCCCATaGCAGGTGGCAGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ATLSQPSGKVTKRLSNTLQCTRP*QVAAGG
Trigger: ACCCCCTGCTGCCACCTGCCATGGGCGAGTACACTG...GAGAGTGTTGGACAGCCGCTTGGTCACCTTCCCCGAGGGCTGCGAGAGTGTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TCCGGCCCCGCTAGCTGCTCGGGTTCCACCGGGGCCGCCACGACGCGCAGCACCCTGGAATTTCTCCACTaGTTCTTCAACTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SGPASCSGSTGAATTRSTLEFLH*FFNCFL
Trigger: CAGAAAGCAGTTGAAGAAGCAGTGGAGAAATTCCAG...GGTGCTGCGCGTCGTGGCGGCCCCGGTGGAACCCGAGCAGCTAGCGGGGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGCTGCGGCGCACTAAGGCCCACACAGCCACGCCGTCGCATTACCTGCACCATCTCGGTGGCTGCAGCGTaGCTGGTTGTGTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SCGALRPTQPRRRITCTISVAAA*LVVWLV
Trigger: TACCAGCCACACAACCAGGCACGCTGCAGCCACCGA...GATGGTGCAGGTAATGCGACGGCGTGGCTGTGTGGGCCTTAGTGCGCCGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp GGGTCCCCGACCTGGCACACGTGCGCGTATGGCGGCTGCGGCGCGCCACATACATCATTCACAATGCCCTaGATAACGGGGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSPTWHTCAYGGCGAPHTSFTMP*ITGMEE
Trigger: CTCCTCCATCCCCGTTATCCAGGGCATTGTGAATGA...TGTATGTGGCGCGCCGCAGCCGCCATACGCGCACGTGTGCCAGGTCGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGGATTTCTGTGTGCCGGTTTAGAGTCAGCGTGTTCATGCGGCGGCTGGAGCTGCAGGCCAGCCGCACCTaGAGCTCTGCTGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: RISVCRFRVSVFMRRLELQASRT*SSAGSG
Trigger: CCCGCTTCCAGCAGAGCTGCAGGTGCGGCTGGCCTG...CAGCTCCAGCCGCCGCATGAACACGCTGACTCTAAACCGGCACACAGAAATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
CDS-3UTR CCA 90 bp GGGTCCCCGACCTGGCACACGTGCGCGTATGGCGGCTGCGGCGCGCCACATACATTAGCATCAGCTGCATaGACTGGCGCACTTCATTCA +
Preference number: 4 (lower is better)
Translates to: GSPTWHTCAYGGCGAPHTLASAA*TGALHS
Trigger: TGAATGAAGTGCGCCAGTCCATGCAGCTGATGCTAA...TGTATGTGGCGCGCCGCAGCCGCCATACGCGCACGTGTGCCAGGTCGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AGCTGCGGCGCACTAAGGCCCACACAGCCACGCCGTCGCATTACCTGCACCATCGACACGGAGGCAGGCTaGGAGCTGGATGTTAGTCCT +
Preference number: 4 (lower is better)
Translates to: SCGALRPTQPRRRITCTIDTEAG*ELDVSP
Trigger: AGGACTAACATCCAGCTCCCAGCCTGCCTCCGTGTC...GATGGTGCAGGTAATGCGACGGCGTGGCTGTGTGGGCCTTAGTGCGCCGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CCCCTGCACCTGAGATCTGCACGGCTTGGAAGCGAGGCACACACGCCAGAAAGCGGATGGCAGTCAGGATaGAGCGGAGCCAAGCATCCC +
Preference number: 4 (lower is better)
Translates to: PLHLRSARLGSEAHTPESGWQSG*SGAKHP
Trigger: GGGATGCTTGGCTCCGCTCCATCCTGACTGCCATCC...GCTTTCTGGCGTGTGTGCCTCGCTTCCAAGCCGTGCAGATCTCAGGTGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CACTTGCCGACCACACCACTGGCTCTCCTTTTGGGTCCAGTCCTTCCCGCTGCACAGTGTACTCGCCCATaGCAGGTGGCAGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: HLPTTPLALLLGPVLPAAQCTRP*QVAAGG
Trigger: ACCCCCTGCTGCCACCTGCCATGGGCGAGTACACTG...TGCAGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
CDS-3UTR GCA 90 bp CCCCTGCACCTGAGATCTGCACGGCTTGGAAGCGAGGCACACACGCCAGAAAGCGCTGCCCAGGATGGCTaGAGTCGAGATGAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: PLHLRSARLGSEAHTPESAAQDG*SRDEGV
Trigger: TACACCCTCATCTCGACTGCAGCCATCCTGGGCAGC...GCTTTCTGGCGTGTGTGCCTCGCTTCCAAGCCGTGCAGATCTCAGGTGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CCGTACATAGGCGGCAAGCTCCAGCGCCTCTTCATGATAGCTGTTTCGGACACAGTCTGCTGCAGCCGCTaGGCCCGCTCTTCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: PYIGGKLQRLFMIAVSDTVCCSR*ARSSAK
Trigger: CTTGGCGGAAGAGCGGGCCCAGCGGCTGCAGCAGAC...TGTGTCCGAAACAGCTATCATGAAGAGGCGCTGGAGCTTGCCGCCTATGTACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
3UTR CAA 72 bp TCCAACCACTTGCCGACCACACCACTGGCTCTCCTTTaGGGTCCAGTCCTTCCCGCTGCAGAAGCGCGTACC +
Preference number: 4 (lower is better)
Translates to: SNHLPTTPLALL*GPVLPAAEART
Trigger: GGTACGCGCTTCTGCAGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTGGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
CDS-3UTR CCA 90 bp CACTTGCCGACCACACCACTGGCTCTCCTTTTGGGTCCAGTCCTTCCCGCTGCAGACACGGAGGCAGGCTaGGAGCTGGATGTTAGTCCT +
Preference number: 4 (lower is better)
Translates to: HLPTTPLALLLGPVLPAADTEAG*ELDVSP
Trigger: AGGACTAACATCCAGCTCCCAGCCTGCCTCCGTGTC...TGCAGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
CDS-3UTR GCA 90 bp CTGGAGCTGATCTCCTCAGCTTCCTTCACAAAGTTCCTAGATGGCTGCTGTGAAAGGTCGCGCGTCTGCTaGAGCCGCTGGGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LELISSASFTKFLDGCCERSRVC*SRWARS
Trigger: AGAGCGGGCCCAGCGGCTGCAGCAGACGCGCGACCT...TTCACAGCAGCCATCTAGGAACTTTGTGAAGGAAGCTGAGGAGATCAGCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
CDS-3UTR TCA 90 bp AGGATTTCTGTGTGCCGGTTTAGAGTCAGCGTGTTCATGCGGCGGCTGGAGCTGACTCGGCCCCGCGAATaGACGTCTTGTAGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: RISVCRFRVSVFMRRLELTRPRE*TSCSWR
Trigger: TCGCCAACTACAAGACGTTCATTCGCGGGGCCGAGT...CAGCTCCAGCCGCCGCATGAACACGCTGACTCTAAACCGGCACACAGAAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
CDS-3UTR TCA 90 bp TTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAACCCTCCATGGGCTCCTaGGGCAGCGGCTCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LYRGCLPAHSSPWEIVRKPSMGS*GSGSPG
Trigger: ACCAGGGGAGCCGCTGCCTCAGGAGCCCATGGAGGG...TTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGCTGGATGTTAGTCCTCAGTTGTTGGATCAGCTGGCTTAGCATCAGCTGCATGCCGCACCTGCAGCTCTaGTGGAAGCGGGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: SWMLVLSCWISWLSISCMPHLQL*WKRGRR
Trigger: CCGTCTGCCCCGCTTCCAGCAGAGCTGCAGGTGCGG...CATGCAGCTGATGCTAAGCCAGCTGATCCAACAACTGAGGACTAACATCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
CDS-3UTR CCA 90 bp TGGCTTAGCATCAGCTGCATGGACTGGCGCACTTCATTCACAATGCCCTGGATATCGCCGAAGAGCCGGTaGATGCGCTCGGTGCACTCG +
Preference number: 4 (lower is better)
Translates to: WLSISCMDWRTSFTMPWISPKSR*MRSVHS
Trigger: CGAGTGCACCGAGCGCATCCACCGGCTCTTCGGCGA...TATCCAGGGCATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
CDS-3UTR TCA 90 bp ACTGGAACCAATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTCCCTCCATGGGCTCCTaGGGCAGCGGCTCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: TGTNSKLKHRCDHLSLHAPSMGS*GSGSPG
Trigger: ACCAGGGGAGCCGCTGCCTCAGGAGCCCATGGAGGG...AGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATTGGTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAACGAAGAGCCGGTGGATaGGCTCGGTGCACTCGGCCC +
Preference number: 4 (lower is better)
Translates to: FVQRMFACPLLSMGNCQERRAGG*ARCTRP
Trigger: GGGCCGAGTGCACCGAGCGCATCCACCGGCTCTTCG...TTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTAGCCTACGATTGCCAACAGAGTGCTGGAATTAAAGGTGTGCCACCACACTCAGTCTGCTGCAGCCGCTaGGCCCGCTCTTCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: LAYDCQQSAGIKGVPPHSVCCSR*ARSSAK
Trigger: CTTGGCGGAAGAGCGGGCCCAGCGGCTGCAGCAGAC...TGAGTGTGGTGGCACACCTTTAATTCCAGCACTCTGTTGGCAATCGTAGGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CCCCTGCACCTGAGATCTGCACGGCTTGGAAGCGAGGCACACACGCCAGAAAGCAGTTGTTGGATCAGCTaGCTTAGCATCAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: PLHLRSARLGSEAHTPESSCWIS*LSISCM
Trigger: CATGCAGCTGATGCTAAGCCAGCTGATCCAACAACT...GCTTTCTGGCGTGTGTGCCTCGCTTCCAAGCCGTGCAGATCTCAGGTGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAATCTCCGCAGGGAGCTCTaGAGCTGGGGCCACGAGGTC +
Preference number: 4 (lower is better)
Translates to: CTEDVCLPTPLHGKLSGNLRREL*SWGHEV
Trigger: GACCTCGTGGCCCCAGCTCCAGAGCTCCCTGCGGAG...ATTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGATGTGACCATCTTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGAGAGGTCGCGCGTCTGCTaGAGCCGCTGGGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: RCDHLSLHAGFPDPQFKERSRVC*SRWARS
Trigger: AGAGCGGGCCCAGCGGCTGCAGCAGACGCGCGACCT...CTCCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAAGATGGTCACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCAAGGTCGCGCGTCTGCTaGAGCCGCTGGGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: NSKLKHRCDHLSLHAGFPRSRVC*SRWARS
Trigger: AGAGCGGGCCCAGCGGCTGCAGCAGACGCGCGACCT...TGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp CTTGCCGACCACACCACTGGCTCTCCTTTTGGGTCCAGTCCTGCAAAGGAAGTTCCTTCACAAAGTTCCTaGAGCTCTGCTGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: LADHTTGSPFGSSPAKEVPSQSS*SSAGSG
Trigger: CCCGCTTCCAGCAGAGCTGCAGGAACTTTGTGAAGG...AACTTCCTTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAATGCGGGCAGGGGACACTaGCTATGGCTCCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: CTEDVCLPTPLHGKLSGNAGRGH*LWLLPH
Trigger: GTGAGGGAGGAGCCATAGGCAGTGTCCCCTGCCCGC...ATTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTAGCCTACGATTGCCAACAGAGTGCTGGAATTAAAGGTGTGCCACCACACTCATGGCCGAAGCGGTCGTaGAGGGCTGGAGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LAYDCQQSAGIKGVPPHSWPKRS*RAGEGE
Trigger: CTCTCCCTCTCCAGCCCTCCACGACCGCTTCGGCCA...TGAGTGTGGTGGCACACCTTTAATTCCAGCACTCTGTTGGCAATCGTAGGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CCTTCAGTCCCAAAGCTCAGGAGTACAGAGGCAGGTATATCTCTTAAGTTTGAGCTCCGCAGGGAGCTCTaGAGCTGGGGCCACGAGGTC +
Preference number: 4 (lower is better)
Translates to: PSVPKLRSTEAGISLKFELRREL*SWGHEV
Trigger: GACCTCGTGGCCCCAGCTCCAGAGCTCCCTGCGGAG...CTCAAACTTAAGAGATATACCTGCCTCTGTACTCCTGAGCTTTGGGACTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp CTCAGGAGTACAGAGGCAGGTATATCTCTTAAGTTTGAGGCCAGCTTGTCTACAGGCTTCTCACGCCACTaGGCTTCGGGGAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LRSTEAGISLKFEASLSTGFSRH*ASGKRS
Trigger: GGACCGCTTCCCCGAAGCTCAGTGGCGTGAGAAGCC...TGTAGACAAGCTGGCCTCAAACTTAAGAGATATACCTGCCTCTGTACTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp ACTGGAACCAATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGCTTCTCACGCCACTaGGCTTCGGGGAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: TGTNSKLKHRCDHLSLHAGFSRH*ASGKRS
Trigger: GGACCGCTTCCCCGAAGCTCAGTGGCGTGAGAAGCC...AGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATTGGTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CATGCTGGATTTCCAGATCCTCAATTCAAGGAGAGTGTTAGTCATTCACCTCCAGTCTGCTGCAGCCGCTaGGCCCGCTCTTCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: HAGFPDPQFKESVSHSPPVCCSR*ARSSAK
Trigger: CTTGGCGGAAGAGCGGGCCCAGCGGCTGCAGCAGAC...TGGAGGTGAATGACTAACACTCTCCTTGAATTGAGGATCTGGAAATCCAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TCAGGAGTACAGAGGCAGGTATATCTCTTAAGTTTGAGGCCAGCTTGTCTACAGTCGCCGAAGAGCCGGTaGATGCGCTCGGTGCACTCG +
Preference number: 4 (lower is better)
Translates to: SGVQRQVYLLSLRPACLQSPKSR*MRSVHS
Trigger: CGAGTGCACCGAGCGCATCCACCGGCTCTTCGGCGA...CTGTAGACAAGCTGGCCTCAAACTTAAGAGATATACCTGCCTCTGTACTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp ACACCACTGGCTCTCCTTTTGGGTCCAGTCCTTCCCGCTGCAGAAGCGCGTACCATGATATCAAAGAGATaGACCCGGCAAGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TPLALLLGPVLPAAEARTMISKR*TRQASM
Trigger: CATTGAGGCTTGCCGGGTCCATCTCTTTGATATCAT...GGTACGCGCTTCTGCAGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
CDS-3UTR CCA 90 bp TGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAATGCGTGCCTGGTTGTGTaGCTGGTACTGTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: CTEDVCLPTPLHGKLSGNACLVV*LVLWQA
Trigger: CGCCTGCCACAGTACCAGCCACACAACCAGGCACGC...ATTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp GAATGTGTCTCATTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAACTCGGCCCCGCGAATaGACGTCTTGTAGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: ECVSFVQRMFACPLLSMGTRPRE*TSCSWR
Trigger: TCGCCAACTACAAGACGTTCATTCGCGGGGCCGAGT...TCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAATGAGACACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAACAGGCGTGTTACTGCTaGCCAGGATGGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LYRGCLPAHSSPWEIVRKQACYC*PGWLQS
Trigger: CGACTGCAGCCATCCTGGGCAGCAGTAACACGCCTG...TTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAATGGCAGGCGTGTTACTaGTGCCCAGGATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FVQRMFACPLLSMGNCQEWQACY*CPGWLQ
Trigger: CTGCAGCCATCCTGGGCAGCAGTAACACGCCTGCCA...TTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCATGGCCGAAGCGGTCGTaGAGGGCTGGAGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NSKLKHRCDHLSLHAGFPWPKRS*RAGEGE
Trigger: CTCTCCCTCTCCAGCCCTCCACGACCGCTTCGGCCA...TGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTCAGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTCTCGCCCATGGCAGGTaGCAGCAGGGGGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FRASISIIFISDQHTLSTLAHGR*QQGVLI
Trigger: GATGAGGACCCCCTGCTGCCACCTGCCATGGGCGAG...AGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TGTCTACAGAGTGAGTTCCACGACAGCCAAGGCTACACAGAGAAACCCTGTTTCGCCTGGTTGTGTGGCTaGTACTGTGGCAGGCGTGTT +
Preference number: 4 (lower is better)
Translates to: CLQSEFHDSQGYTEKPCFAWLCG*YCGRRV
Trigger: AACACGCCTGCCACAGTACCAGCCACACAACCAGGC...GAAACAGGGTTTCTCTGTGTAGCCTTGGCTGTCGTGGAACTCACTCTGTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AGGCGGCACTTAATTCCCTGGAGCTGGAGGTATAGATGTAGTGAGTTGATTGATGCGTGCCTGGTTGTGTaGCTGGTACTGTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RRHLIPWSWRYRCSELIDACLVV*LVLWQA
Trigger: CGCCTGCCACAGTACCAGCCACACAACCAGGCACGC...ATCAATCAACTCACTACATCTATACCTCCAGCTCCAGGGAATTAAGTGCCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp CTGTGTAAGTTTATACACAAAACAATACCTGCAGAGGCCAGGAGGCGGCACTTAGCCGAAGATAGCCTATaGCACGGAGGCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LCKFIHKTIPAEARRRHLAEDSL*HGGRLG
Trigger: TCCCAGCCTGCCTCCGTGTCATAGGCTATCTTCGGC...TAAGTGCCGCCTCCTGGCCTCTGCAGGTATTGTTTTGTGTATAAACTTACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp AGGCGGCACTTAATTCCCTGGAGCTGGAGGTATAGATGTAGTGAGTTGATTGATCATGCTCCCCACTGCTaGACACAGCCTCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: RRHLIPWSWRYRCSELIDHAPHC*TQPLRL
Trigger: GAGCCGAAGAGGCTGTGTTCAGCAGTGGGGAGCATG...ATCAATCAACTCACTACATCTATACCTCCAGCTCCAGGGAATTAAGTGCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGACTGCATTTTAAGACAACTTTCAAGTCCAGCAGTAGTGTGATACACCTTCAGCGAAGAGCCGGTGGATaGGCTCGGTGCACTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RLHFKTTFKSSSSVIHLQRRAGG*ARCTRP
Trigger: GGGCCGAGTGCACCGAGCGCATCCACCGGCTCTTCG...CTGAAGGTGTATCACACTACTGCTGGACTTGAAAGTTGTCTTAAAATGCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTGTCAAGTTCCTGCAGCTCTaGTGGAAGCGGGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: RASISIIFISDQHTLSTVKFLQL*WKRGRR
Trigger: CCGTCTGCCCCGCTTCCAGCAGAGCTGCAGGAACTT...GACAGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAGCTGCCCAGGATGGCTaGAGTCGAGATGAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: FVQRMFACPLLSMGNCQEAAQDG*SRDEGV
Trigger: TACACCCTCATCTCGACTGCAGCCATCCTGGGCAGC...TTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TCAGGAGTACAGAGGCAGGTATATCTCTTAAGTTTGAGGCCAGCTTGTCTACAGGGATGGCAGTCAGGATaGAGCGGAGCCAAGCATCCC +
Preference number: 4 (lower is better)
Translates to: SGVQRQVYLLSLRPACLQGWQSG*SGAKHP
Trigger: GGGATGCTTGGCTCCGCTCCATCCTGACTGCCATCC...CTGTAGACAAGCTGGCCTCAAACTTAAGAGATATACCTGCCTCTGTACTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp GAATGTGTCTCATTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGATCAACTCAGCCTCAGTaGAGACATCCATGCGCCGAA +
Preference number: 4 (lower is better)
Translates to: ECVSFVQRMFACPLLSMGSTQPQ*RHPCAE
Trigger: TTCGGCGCATGGATGTCTTCACTGAGGCTGAGTTGA...TCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAATGAGACACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp GAATGTGTCTCATTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGACAGGGGGTCCTCATCTaGGAAAATAGCACGGTACTG +
Preference number: 4 (lower is better)
Translates to: ECVSFVQRMFACPLLSMGQGVLI*ENSTVL
Trigger: CAGTACCGTGCTATTTTCTCAGATGAGGACCCCCTG...TCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAATGAGACACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCATGGCAGGCGTGTTACTaGTGCCCAGGATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NSKLKHRCDHLSLHAGFPWQACY*CPGWLQ
Trigger: CTGCAGCCATCCTGGGCAGCAGTAACACGCCTGCCA...TGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TTCAGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTCTGTTACAGGCTCCATaGTCCGCTGCTCCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FRASISIIFISDQHTLSTLLQAP*SAAPQG
Trigger: TCCCTGCGGAGCAGCGGAGCATGGAGCCTGTAACAG...AGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGATGTGACCATCTTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGAGCTGTTACAGGCTCCATaGTCCGCTGCTCCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RCDHLSLHAGFPDPQFKELLQAP*SAAPQG
Trigger: TCCCTGCGGAGCAGCGGAGCATGGAGCCTGTAACAG...CTCCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAAGATGGTCACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AGACTGCATTTTAAGACAACTTTCAAGTCCAGCAGTAGTGTGATACACCTTCAGTCGCCGAAGAGCCGGTaGATGCGCTCGGTGCACTCG +
Preference number: 4 (lower is better)
Translates to: RLHFKTTFKSSSSVIHLQSPKSR*MRSVHS
Trigger: CGAGTGCACCGAGCGCATCCACCGGCTCTTCGGCGA...CTGAAGGTGTATCACACTACTGCTGGACTTGAAAGTTGTCTTAAAATGCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CTTGCCGACCACACCACTGGCTCTCCTTTTGGGTCCAGTCCTGCAAAGGAAGTTCACGTGTCCATAAGCTaGGGTATCTCTAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: LADHTTGSPFGSSPAKEVHVSIS*GISKIS
Trigger: GGAGATTTTAGAGATACCCCAGCTTATGGACACGTG...AACTTCCTTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTGTCAGGCAGCGGCTCCCCTaGTTCCCTCTTCTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: RASISIIFISDQHTLSTVRQRLP*FPLLCY
Trigger: GTAACAGAGAAGAGGGAACCAGGGGAGCCGCTGCCT...GACAGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp ACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGACTCGGCCCCGCGAATaGACGTCTTGTAGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: TDVTILVCMLDFQILNSRTRPRE*TSCSWR
Trigger: TCGCCAACTACAAGACGTTCATTCGCGGGGCCGAGT...CCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp CTTGCCGACCACACCACTGGCTCTCCTTTTGGGTCCAGTCCTGCAAAGGAAGTTCACTGCTTCTTCAACTaGTTTCTGGAAAGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LADHTTGSPFGSSPAKEVHCFFN*FLESAD
Trigger: ATCAGCACTTTCCAGAAAGCAGTTGAAGAAGCAGTG...AACTTCCTTTGCAGGACTGGACCCAAAAGGAGAGCCAGTGGTGTGGTCGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTAGCCTACGATTGCCAACAGAGTGCTGGAATTAAAGGTGTGCCACCACACTCATGCAGCACCCATCCATaGAAGATGGCACCCTCATTC +
Preference number: 4 (lower is better)
Translates to: LAYDCQQSAGIKGVPPHSCSTHP*KMAPSF
Trigger: GAATGAGGGTGCCATCTTCCATGGATGGGTGCTGCA...TGAGTGTGGTGGCACACCTTTAATTCCAGCACTCTGTTGGCAATCGTAGGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TGTCTACAGAGTGAGTTCCACGACAGCCAAGGCTACACAGAGAAACCCTGTTTCCCAAAGTACATGCACTaGCCAAGCAGAGAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: CLQSEFHDSQGYTEKPCFPKYMH*PSRESK
Trigger: CTTGGACTCTCTGCTTGGCCAGTGCATGTACTTTGG...GAAACAGGGTTTCTCTGTGTAGCCTTGGCTGTCGTGGAACTCACTCTGTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp GAATGTGTCTCATTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGACTTTCTGGAAAGTGCTaGTTGCCACCCTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: ECVSFVQRMFACPLLSMGLSGKC*LPPSGK
Trigger: TTTTCCAGAGGGTGGCAATCAGCACTTTCCAGAAAG...TCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAATGAGACACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp TTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGAGAGTGTTAGTCATTCATGCTCCCCACTGCTaGACACAGCCTCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LVCMLDFQILNSRRVLVIHAPHC*TQPLRL
Trigger: GAGCCGAAGAGGCTGTGTTCAGCAGTGGGGAGCATG...AATGACTAACACTCTCCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTGTCTGGCTTAGCATCAGCTaGATGGACTGGCGCACTTCA +
Preference number: 4 (lower is better)
Translates to: RASISIIFISDQHTLSTVWLSIS*MDWRTS
Trigger: TGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCA...GACAGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGAGAGTGTTAGTCATTTCGGTGGCTGCAGCGTaGCTGGTTGTGTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LVCMLDFQILNSRRVLVISVAAA*LVVWLV
Trigger: TACCAGCCACACAACCAGGCACGCTGCAGCCACCGA...AATGACTAACACTCTCCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp GAATGTGTCTCATTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGATTAGCATCAGCTGCATaGACTGGCGCACTTCATTCA +
Preference number: 4 (lower is better)
Translates to: ECVSFVQRMFACPLLSMGLASAA*TGALHS
Trigger: TGAATGAAGTGCGCCAGTCCATGCAGCTGATGCTAA...TCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAATGAGACACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AGGCGGCACTTAATTCCCTGGAGCTGGAGGTATAGATGTAGTGAGTTGATTGATTGCAGCACCCATCCATaGAAGATGGCACCCTCATTC +
Preference number: 4 (lower is better)
Translates to: RRHLIPWSWRYRCSELIDCSTHP*KMAPSF
Trigger: GAATGAGGGTGCCATCTTCCATGGATGGGTGCTGCA...ATCAATCAACTCACTACATCTATACCTCCAGCTCCAGGGAATTAAGTGCCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTAGCCTACGATTGCCAACAGAGTGCTGGAATTAAAGGTGTGCCACCACACTCACCGTGCTTAGAGAGCTaGGTGGGTGAAATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: LAYDCQQSAGIKGVPPHSPCLES*VGEMPK
Trigger: TTTAGGCATTTCACCCACCCAGCTCTCTAAGCACGG...TGAGTGTGGTGGCACACCTTTAATTCCAGCACTCTGTTGGCAATCGTAGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAACCGTGCTTAGAGAGCTaGGTGGGTGAAATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: LYRGCLPAHSSPWEIVRKPCLES*VGEMPK
Trigger: TTTAGGCATTTCACCCACCCAGCTCTCTAAGCACGG...TTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp TCAGGAGTACAGAGGCAGGTATATCTCTTAAGTTTGAGGCCAGCTTGTCTACAGCAAGCATCCCGAGCCTaGAGAAATTTCACCCTCAAC +
Preference number: 4 (lower is better)
Translates to: SGVQRQVYLLSLRPACLQQASRA*RNFTLN
Trigger: GTTGAGGGTGAAATTTCTTCAGGCTCGGGATGCTTG...CTGTAGACAAGCTGGCCTCAAACTTAAGAGATATACCTGCCTCTGTACTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp ACTGGAACCAATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTCAAGCATCCCGAGCCTaGAGAAATTTCACCCTCAAC +
Preference number: 4 (lower is better)
Translates to: TGTNSKLKHRCDHLSLHAQASRA*RNFTLN
Trigger: GTTGAGGGTGAAATTTCTTCAGGCTCGGGATGCTTG...AGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATTGGTTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp TTCAGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTCAGGGGGTCCTCATCTaGGAAAATAGCACGGTACTG +
Preference number: 4 (lower is better)
Translates to: FRASISIIFISDQHTLSTQGVLI*ENSTVL
Trigger: CAGTACCGTGCTATTTTCTCAGATGAGGACCCCCTG...AGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp ATTATGTTTCTGTGTAAGTTTATACACAAAACAATACCTGCAGAGGCCAGGAGGAAGTTCCTGCAGCTCTaGTGGAAGCGGGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: IMFLCKFIHKTIPAEARRKFLQL*WKRGRR
Trigger: CCGTCTGCCCCGCTTCCAGCAGAGCTGCAGGAACTT...CCTCCTGGCCTCTGCAGGTATTGTTTTGTGTATAAACTTACACAGAAACATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGGCGGCACTTAATTCCCTGGAGCTGGAGGTATAGATGTAGTGAGTTGATTGATCTGGAAAGTGCTGATTaGCACCCTCTGGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: RRHLIPWSWRYRCSELIDLESAD*HPLENR
Trigger: CCTGTTTTCCAGAGGGTGGCAATCAGCACTTTCCAG...ATCAATCAACTCACTACATCTATACCTCCAGCTCCAGGGAATTAAGTGCCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTGTCTCATTCACAATGCCCTaGATAACGGGGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RASISIIFISDQHTLSTVSFTMP*ITGMEE
Trigger: CTCCTCCATCCCCGTTATCCAGGGCATTGTGAATGA...GACAGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTAGCCTACGATTGCCAACAGAGTGCTGGAATTAAAGGTGTGCCACCACACTCAATCAGCTGCATGGACTaGCGCACTTCATTCACAATG +
Preference number: 4 (lower is better)
Translates to: LAYDCQQSAGIKGVPPHSISCMD*RTSFTM
Trigger: CATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGAT...TGAGTGTGGTGGCACACCTTTAATTCCAGCACTCTGTTGGCAATCGTAGGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TGTCTACAGAGTGAGTTCCACGACAGCCAAGGCTACACAGAGAAACCCTGTTTCTTAGTCCTCAGTTGTTaGATCAGCTGGCTTAGCATC +
Preference number: 4 (lower is better)
Translates to: CLQSEFHDSQGYTEKPCFLVLSC*ISWLSI
Trigger: GATGCTAAGCCAGCTGATCCAACAACTGAGGACTAA...GAAACAGGGTTTCTCTGTGTAGCCTTGGCTGTCGTGGAACTCACTCTGTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp ACTGGAACCAATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTCCCATCCATGGAAGATaGCACCCTCATTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: TGTNSKLKHRCDHLSLHAPIHGR*HPHSQC
Trigger: ACACTGTGAATGAGGGTGCCATCTTCCATGGATGGG...AGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATTGGTTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AGACTGCATTTTAAGACAACTTTCAAGTCCAGCAGTAGTGTGATACACCTTCAGAAAACAGGAGCCAACTaGCCGCGGAAATCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RLHFKTTFKSSSSVIHLQKTGAN*PRKSAP
Trigger: GGGGGCTGATTTCCGCGGCCAGTTGGCTCCTGTTTT...CTGAAGGTGTATCACACTACTGCTGGACTTGAAAGTTGTCTTAAAATGCAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CTATTTATATCCTATCTACAGAGGCAGCATCCAAGAGTGAATGTGGATAACAGCAAAACAGGAGCCAACTaGCCGCGGAAATCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LFISYLQRQHPRVNVDNSKTGAN*PRKSAP
Trigger: GGGGGCTGATTTCCGCGGCCAGTTGGCTCCTGTTTT...GCTGTTATCCACATTCACTCTTGGATGCTGCCTCTGTAGATAGGATATAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp ACTGGAACCAATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTCTGGGCTATCTGAGCTaGTGGGAAAAGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: TGTNSKLKHRCDHLSLHALGYLS*WEKDLK
Trigger: CTTCAAGTCCTTTTCCCACCAGCTCAGATAGCCCAG...AGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATTGGTTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGAGAGTGTTAGTCATTAGGCAGCGGCTCCCCTaGTTCCCTCTTCTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LVCMLDFQILNSRRVLVIRQRLP*FPLLCY
Trigger: GTAACAGAGAAGAGGGAACCAGGGGAGCCGCTGCCT...AATGACTAACACTCTCCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp CTGTGTAAGTTTATACACAAAACAATACCTGCAGAGGCCAGGAGGCGGCACTTACAACCAAAATGTTGTTaGGGAAACAGGCAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LCKFIHKTIPAEARRRHLQPKCC*GNRQEA
Trigger: CGCCTCTTGCCTGTTTCCTCAACAACATTTTGGTTG...TAAGTGCCGCCTCCTGGCCTCTGCAGGTATTGTTTTGTGTATAAACTTACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp AGGCGGCACTTAATTCCCTGGAGCTGGAGGTATAGATGTAGTGAGTTGATTGATCAACCAAAATGTTGTTaGGGAAACAGGCAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: RRHLIPWSWRYRCSELIDQPKCC*GNRQEA
Trigger: CGCCTCTTGCCTGTTTCCTCAACAACATTTTGGTTG...ATCAATCAACTCACTACATCTATACCTCCAGCTCCAGGGAATTAAGTGCCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TTCAGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTCTGGAAAGTGCTGATTaGCACCCTCTGGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: FRASISIIFISDQHTLSTLESAD*HPLENR
Trigger: CCTGTTTTCCAGAGGGTGGCAATCAGCACTTTCCAG...AGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp TTCAGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTGCTGGGTGGGTGAAATaGCTAAAGTCTGGGCTATCT +
Preference number: 4 (lower is better)
Translates to: FRASISIIFISDQHTLSTAGWVK*LKSGLS
Trigger: AGATAGCCCAGACTTTAGGCATTTCACCCACCCAGC...AGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCAGCTGGGTGGGTGAAATaGCTAAAGTCTGGGCTATCT +
Preference number: 4 (lower is better)
Translates to: NSKLKHRCDHLSLHAGFPAGWVK*LKSGLS
Trigger: AGATAGCCCAGACTTTAGGCATTTCACCCACCCAGC...TGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAATCACGTGTCCATAAGCTaGGGTATCTCTAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: CTEDVCLPTPLHGKLSGNHVSIS*GISKIS
Trigger: GGAGATTTTAGAGATACCCCAGCTTATGGACACGTG...ATTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp AATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCACCCATCCATGGAAGATaGCACCCTCATTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: NSKLKHRCDHLSLHAGFPPIHGR*HPHSQC
Trigger: ACACTGTGAATGAGGGTGCCATCTTCCATGGATGGG...TGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTCAGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTCTGGGCTATCTGAGCTaGTGGGAAAAGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: FRASISIIFISDQHTLSTLGYLS*WEKDLK
Trigger: CTTCAAGTCCTTTTCCCACCAGCTCAGATAGCCCAG...AGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp CTATTTATATCCTATCTACAGAGGCAGCATCCAAGAGTGAATGTGGATAACAGCTCAACTCAGCCTCAGTaGAGACATCCATGCGCCGAA +
Preference number: 4 (lower is better)
Translates to: LFISYLQRQHPRVNVDNSSTQPQ*RHPCAE
Trigger: TTCGGCGCATGGATGTCTTCACTGAGGCTGAGTTGA...GCTGTTATCCACATTCACTCTTGGATGCTGCCTCTGTAGATAGGATATAAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp TTCAGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTCTTTCTGGAAAGTGCTaGTTGCCACCCTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: FRASISIIFISDQHTLSTLSGKC*LPPSGK
Trigger: TTTTCCAGAGGGTGGCAATCAGCACTTTCCAGAAAG...AGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp ATTATGTTTCTGTGTAAGTTTATACACAAAACAATACCTGCAGAGGCCAGGAGGCCTTCACAAAGTTCCTaGAGCTCTGCTGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: IMFLCKFIHKTIPAEARRPSQSS*SSAGSG
Trigger: CCCGCTTCCAGCAGAGCTGCAGGAACTTTGTGAAGG...CCTCCTGGCCTCTGCAGGTATTGTTTTGTGTATAAACTTACACAGAAACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp CTTTTAAGAGAATCTTACTATGTTCCTTTGATGGCCTTAAACATTAGCCTACGACAGGCGTGTTACTGCTaGCCAGGATGGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LLRESYYVPLMALNISLRQACYC*PGWLQS
Trigger: CGACTGCAGCCATCCTGGGCAGCAGTAACACGCCTG...TCGTAGGCTAATGTTTAAGGCCATCAAAGGAACATAGTAAGATTCTCTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTCAGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTATCAGCTGCATGGACTaGCGCACTTCATTCACAATG +
Preference number: 4 (lower is better)
Translates to: FRASISIIFISDQHTLSTISCMD*RTSFTM
Trigger: CATTGTGAATGAAGTGCGCCAGTCCATGCAGCTGAT...AGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp CACTACTACAGGGCAAGGATAAGAAATCAAAACTCTTTTCAAGGGCTGTTTATCTGGCTTAGCATCAGCTaGATGGACTGGCGCACTTCA +
Preference number: 4 (lower is better)
Translates to: HYYRARIRNQNSFQGLFIWLSIS*MDWRTS
Trigger: TGAAGTGCGCCAGTCCATGCAGCTGATGCTAAGCCA...GATAAACAGCCCTTGAAAAGAGTTTTGATTTCTTATCCTTGCCCTGTAGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAAGAAGTCATTTCATCCTaGAATTTCTCCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LYRGCLPAHSSPWEIVRKEVISS*NFSTAS
Trigger: AGAAGCAGTGGAGAAATTCCAGGATGAAATGACTTC...TTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGATGTGACCATCTTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGAGCACTGCTTCTTCAACTaGTTTCTGGAAAGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: RCDHLSLHAGFPDPQFKEHCFFN*FLESAD
Trigger: ATCAGCACTTTCCAGAAAGCAGTTGAAGAAGCAGTG...CTCCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAAGATGGTCACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp TTAGCCTACGATTGCCAACAGAGTGCTGGAATTAAAGGTGTGCCACCACACTCAAAAATAGCACGGTACTaGGTGATGATATCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LAYDCQQSAGIKGVPPHSKIARY*VMISKR
Trigger: TCTCTTTGATATCATCACCCAGTACCGTGCTATTTT...TGAGTGTGGTGGCACACCTTTAATTCCAGCACTCTGTTGGCAATCGTAGGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp AATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCACCTCAATGGTTTTTGTaGTGTGGAAGTAAGGATCAT +
Preference number: 4 (lower is better)
Translates to: NSKLKHRCDHLSLHAGFPPQWFL*CGSKDH
Trigger: ATGATCCTTACTTCCACATCACAAAAACCATTGAGG...TGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp ATTATGTTTCTGTGTAAGTTTATACACAAAACAATACCTGCAGAGGCCAGGAGGAGTTGTTGGATCAGCTaGCTTAGCATCAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: IMFLCKFIHKTIPAEARRSCWIS*LSISCM
Trigger: CATGCAGCTGATGCTAAGCCAGCTGATCCAACAACT...CCTCCTGGCCTCTGCAGGTATTGTTTTGTGTATAAACTTACACAGAAACATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CTCAGGAGTACAGAGGCAGGTATATCTCTTAAGTTTGAGGCCAGCTTGTCTACAAAAATAGCACGGTACTaGGTGATGATATCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LRSTEAGISLKFEASLSTKIARY*VMISKR
Trigger: TCTCTTTGATATCATCACCCAGTACCGTGCTATTTT...TGTAGACAAGCTGGCCTCAAACTTAAGAGATATACCTGCCTCTGTACTCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CATGCTGGATTTCCAGATCCTCAATTCAAGGAGAGTGTTAGTCATTCACCTCCAGAAGTCATTTCATCCTaGAATTTCTCCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HAGFPDPQFKESVSHSPPEVISS*NFSTAS
Trigger: AGAAGCAGTGGAGAAATTCCAGGATGAAATGACTTC...TGGAGGTGAATGACTAACACTCTCCTTGAATTGAGGATCTGGAAATCCAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR GCA 90 bp AGACTGCATTTTAAGACAACTTTCAAGTCCAGCAGTAGTGTGATACACCTTCAGCTGGAATTTCTCCACTaGTTCTTCAACTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RLHFKTTFKSSSSVIHLQLEFLH*FFNCFL
Trigger: CAGAAAGCAGTTGAAGAAGCAGTGGAGAAATTCCAG...CTGAAGGTGTATCACACTACTGCTGGACTTGAAAGTTGTCTTAAAATGCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR TCA 90 bp AGACTGCATTTTAAGACAACTTTCAAGTCCAGCAGTAGTGTGATACACCTTCAGCCTCAATGGTTTTTGTaGTGTGGAAGTAAGGATCAT +
Preference number: 4 (lower is better)
Translates to: RLHFKTTFKSSSSVIHLQPQWFL*CGSKDH
Trigger: ATGATCCTTACTTCCACATCACAAAAACCATTGAGG...CTGAAGGTGTATCACACTACTGCTGGACTTGAAAGTTGTCTTAAAATGCAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CCA 90 bp CTTTTAAGAGAATCTTACTATGTTCCTTTGATGGCCTTAAACATTAGCCTACGATTAGTCCTCAGTTGTTaGATCAGCTGGCTTAGCATC +
Preference number: 4 (lower is better)
Translates to: LLRESYYVPLMALNISLRLVLSC*ISWLSI
Trigger: GATGCTAAGCCAGCTGATCCAACAACTGAGGACTAA...TCGTAGGCTAATGTTTAAGGCCATCAAAGGAACATAGTAAGATTCTCTTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS GCA 90 bp ACAATGACGCGCCCGTCCCCATCAGGCCAGCCGCACCTGCAGCTCTaGTGGAAGCGGGGCAGACGGTCGAGCAGGCGCCCGAGGGACGCC +
Preference number: 5 (lower is better)
Translates to: TMTRPSPSGQPHLQL*WKRGRRSSRRPRDA
Trigger: GGCGTCCCTCGGGCGCCTGCTCGACCGTCTGCCCCGCTTCCAGCAGAGCTGCAGGTGCGGCTGGCCTGATGGGGACGGGCGCGTCATTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
CDS CCA 90 bp CCTCATCTTCCACCTCCCCCAGCGCGACGGCCGTGGCTGTCGTCGTaGCCGAAGCGGTCGTGGAGGGCTGGAGAGGGAGAGCGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: PHLPPPPARRPWLSS*PKRSWRAGEGERPP
Trigger: TGGCGGCCGCTCTCCCTCTCCAGCCCTCCACGACCGCTTCGGCCACGACGACAGCCACGGCCGTCGCGCTGGGGGAGGTGGAAGATGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp ACGCCAGGAGGCCCTCATCTTCCACCTCCCCCAGCGCGACGGCCGTaGCTGTCGTCGTGGCCGAAGCGGTCGTGGAGGGCTGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: TPGGPHLPPPPARRP*LSSWPKRSWRAGEG
Trigger: TCCCTCTCCAGCCCTCCACGACCGCTTCGGCCACGACGACAGCCACGGCCGTCGCGCTGGGGGAGGTGGAAGATGAGGGCCTCCTGGCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS GCA 90 bp GGCTCCCCTGGTTCCCTCTTCTCTGTTACAGGCTCCATGCTCCGCTaGTCCGCAGGGAGCTCTGGAGCTGGGGCCACGAGGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: GSPGSLFSVTGSMLR*SAGSSGAGATRSGP
Trigger: GGGGCCGGACCTCGTGGCCCCAGCTCCAGAGCTCCCTGCGGAGCAGCGGAGCATGGAGCCTGTAACAGAGAAGAGGGAACCAGGGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp TGGCAGCGGCTCCCCCTCCATGGGCTCCTGAGGCAGCGGCTCCCCTaGTTCCCTCTTCTCTGTTACAGGCTCCATGCTCCGCTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: WQRLPLHGLLRQRLP*FPLLCYRLHAPLLR
Trigger: GCGGAGCAGCGGAGCATGGAGCCTGTAACAGAGAAGAGGGAACCAGGGGAGCCGCTGCCTCAGGAGCCCATGGAGGGGGAGCCGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS GCA 90 bp GAGGCAGCGGCTCCCCTGGTTCCCTCTTCTCTGTTACAGGCTCCATaGTCCGCTGCTCCGCAGGGAGCTCTGGAGCTGGGGCCACGAGGT +
Preference number: 5 (lower is better)
Translates to: EAAAPLVPSSLLQAP*SAAPQGALELGPRG
Trigger: ACCTCGTGGCCCCAGCTCCAGAGCTCCCTGCGGAGCAGCGGAGCATGGAGCCTGTAACAGAGAAGAGGGAACCAGGGGAGCCGCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS TCA 90 bp CGCCGAAGAGCCGGTGGATGCGCTCGGTGCACTCGGCCCCGCGAATaGACGTCTTGTAGTTGGCGAAAGCCAGGTCGCGCGTCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: RRRAGGCARCTRPRE*TSCSWRKPGRASAA
Trigger: TGCAGCAGACGCGCGACCTGGCTTTCGCCAACTACAAGACGTTCATTCGCGGGGCCGAGTGCACCGAGCGCATCCACCGGCTCTTCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
ENSMUST00000134772.2
CDS GCA 90 bp AGGCAAGAGGCGGGAAGTCTAAGAGCACCATCGGTGGCTGCAGCGTaGCTGGTTGTGTGGCTGGTACTGTGGCAGGCGTGTTACTGCTGC +
Preference number: 5 (lower is better)
Translates to: RQEAGSLRAPSVAAA*LVVWLVLWQACYCC
Trigger: GCAGCAGTAACACGCCTGCCACAGTACCAGCCACACAACCAGGCACGCTGCAGCCACCGATGGTGCTCTTAGACTTCCCGCCTCTTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp GGAAGTCTAAGAGCACCATCGGTGGCTGCAGCGTGCCTGGTTGTGTaGCTGGTACTGTGGCAGGCGTGTTACTGCTGCCCAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: GSLRAPSVAAACLVV*LVLWQACYCCPGWL
Trigger: CAGCCATCCTGGGCAGCAGTAACACGCCTGCCACAGTACCAGCCACACAACCAGGCACGCTGCAGCCACCGATGGTGCTCTTAGACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS GCA 90 bp AGGAAACAGGCAAGAGGCGGGAAGTCTAAGAGCACCATCGGTGGCTaGAGCGTGCCTGGTTGTGTGGCTGGTACTGTGGCAGGCGTGTTA +
Preference number: 5 (lower is better)
Translates to: RKQARGGKSKSTIGG*SVPGCVAGTVAGVL
Trigger: TAACACGCCTGCCACAGTACCAGCCACACAACCAGGCACGCTGCAGCCACCGATGGTGCTCTTAGACTTCCCGCCTCTTGCCTGTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp TTCTGGAAAGTGCTGATTGCCACCCTCTGGAAAACAGGAGCCAACTaGCCGCGGAAATCAGCCCCCACCCGGCTAAAGGACAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: FWKVLIATLWKTGAN*PRKSAPTRLKDSPK
Trigger: CTTTGGGCTGTCCTTTAGCCGGGTGGGGGCTGATTTCCGCGGCCAGTTGGCTCCTGTTTTCCAGAGGGTGGCAATCAGCACTTTCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS TCA 90 bp CTGTGTGCCGGTTTAGAGTCAGCGTGTTCATGCGGCGGCTGGAGCTaGTCTCCTCAGCTTCCTTCACAAAGTTCCTGCAGCTCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LCAGLESACSCGGWS*SPQLPSQSSCSSAG
Trigger: TCCAGCAGAGCTGCAGGAACTTTGTGAAGGAAGCTGAGGAGATCAGCTCCAGCCGCCGCATGAACACGCTGACTCTAAACCGGCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp ACTGCTTCTTCAACTGCTTTCTGGAAAGTGCTGATTGCCACCCTCTaGAAAACAGGAGCCAACTGGCCGCGGAAATCAGCCCCCACCCGG +
Preference number: 5 (lower is better)
Translates to: TASSTAFWKVLIATL*KTGANWPRKSAPTR
Trigger: CCGGGTGGGGGCTGATTTCCGCGGCCAGTTGGCTCCTGTTTTCCAGAGGGTGGCAATCAGCACTTTCCAGAAAGCAGTTGAAGAAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp CCTGCAGGAACTGTGAGATTTTCTGCAGCACCCATCCATGGAAGATaGCACCCTCATTCACAGTGTACTCGCCCATGGCAGGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PAGTVRFSAAPIHGR*HPHSQCTRPWQVAA
Trigger: TGCTGCCACCTGCCATGGGCGAGTACACTGTGAATGAGGGTGCCATCTTCCATGGATGGGTGCTGCAGAAAATCTCACAGTTCCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CAA 90 bp AGCTGCGGCGCACTAAGGCCCACACAGCCACGCCGTCGCATTACCTGCACCATCAAAGCAACCAAAATGTaGTTGAGGAAACAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: SCGALRPTQPRRRITCTIKATKM*LRKQAR
Trigger: TCTTGCCTGTTTCCTCAACAACATTTTGGTTGCTTT...GATGGTGCAGGTAATGCGACGGCGTGGCTGTGTGGGCCTTAGTGCGCCGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095517.12
CDS-3UTR CAA 90 bp ACACCACTGGCTCTCCTTTTGGGTCCAGTCCTTCCCGCTGCAGAAGCGCGTACCTGGTGGGAAAAGGACTaGAAGACAGCGGTTCAAATA +
Preference number: 5 (lower is better)
Translates to: TPLALLLGPVLPAAEARTWWEKD*KTAVQI
Trigger: TATTTGAACCGCTGTCTTCAAGTCCTTTTCCCACCA...GGTACGCGCTTCTGCAGCGGGAAGGACTGGACCCAAAAGGAGAGCCAGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034391.4
CDS TCA 90 bp TTAGGGATGGCAGTCAGGATGGAGCGGAGCCAAGCATCCCGAGCCTaGAGAAATTTCACCCTCAACTCAGCCTCAGTGAAGACATCCATG +
Preference number: 5 (lower is better)
Translates to: LGMAVRMERSQASRA*RNFTLNSASVKTSM
Trigger: CATGGATGTCTTCACTGAGGCTGAGTTGAGGGTGAAATTTCTTCAGGCTCGGGATGCTTGGCTCCGCTCCATCCTGACTGCCATCCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp GCAGGTGGCAGCAGGGGGTCCTCATCTGAGAAAATAGCACGGTACTaGGTGATGATATCAAAGAGATGGACCCGGCAAGCCTCAATGGTT +
Preference number: 5 (lower is better)
Translates to: AGGSRGSSSEKIARY*VMISKRWTRQASMV
Trigger: AACCATTGAGGCTTGCCGGGTCCATCTCTTTGATATCATCACCCAGTACCGTGCTATTTTCTCAGATGAGGACCCCCTGCTGCCACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp TCTAGCACCTGCAGGAACTGTGAGATTTTCTGCAGCACCCATCCATaGAAGATGGCACCCTCATTCACAGTGTACTCGCCCATGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SSTCRNCEIFCSTHP*KMAPSFTVYSPMAG
Trigger: ACCTGCCATGGGCGAGTACACTGTGAATGAGGGTGCCATCTTCCATGGATGGGTGCTGCAGAAAATCTCACAGTTCCTGCAGGTGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS TCA 90 bp CCTGGAATTTCTCCACTGCTTCTTCAACTGCTTTCTGGAAAGTGCTaGTTGCCACCCTCTGGAAAACAGGAGCCAACTGGCCGCGGAAAT +
Preference number: 5 (lower is better)
Translates to: PGISPLLLQLLSGKC*LPPSGKQEPTGRGN
Trigger: ATTTCCGCGGCCAGTTGGCTCCTGTTTTCCAGAGGGTGGCAATCAGCACTTTCCAGAAAGCAGTTGAAGAAGCAGTGGAGAAATTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS GCA 90 bp GAATTTCTCCACTGCTTCTTCAACTGCTTTCTGGAAAGTGCTGATTaGCACCCTCTGGAAAACAGGAGCCAACTGGCCGCGGAAATCAGC +
Preference number: 5 (lower is better)
Translates to: EFLHCFFNCFLESAD*HPLENRSQLAAEIS
Trigger: GCTGATTTCCGCGGCCAGTTGGCTCCTGTTTTCCAGAGGGTGGCAATCAGCACTTTCCAGAAAGCAGTTGAAGAAGCAGTGGAGAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp CAGAAAACTGTTTCTCTCTTAGGCAAAATAAAGGCGAGAGGTTCCTaGATGGCGCTGATGTTCACGTGTCCAAGGTTTCCGTGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: QKTVSLLGKIKARGS*MALMFTCPRFPCLE
Trigger: CTCTAAGCACGGAAACCTTGGACACGTGAACATCAGCGCCATCCAGGAACCTCTCGCCTTTATTTTGCCTAAGAGAGAAACAGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CAA 90 bp TTTGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAGCAACCAAAATGTTGTaGAGGAAACAGGCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: FVQRMFACPLLSMGNCQEATKML*RKQARG
Trigger: GCCTCTTGCCTGTTTCCTCAACAACATTTTGGTTGC...TTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 90 bp AGGATGGCTGCAGTCGAGATGAGGGTGTATGAAGTCATTTCATCCTaGAATTTCTCCACTGCTTCTTCAACTGCTTTCTGGAAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: RMAAVEMRVYEVISS*NFSTASSTAFWKVL
Trigger: CAGCACTTTCCAGAAAGCAGTTGAAGAAGCAGTGGAGAAATTCCAGGATGAAATGACTTCATACACCCTCATCTCGACTGCAGCCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CAA 90 bp TGTACAGAGGATGTTTGCCTGCCCACTCCTCTCCATGGGAAATTGTCAGGAAATTGGTGGGAAAAGGACTaGAAGACAGCGGTTCAAATA +
Preference number: 5 (lower is better)
Translates to: CTEDVCLPTPLHGKLSGNWWEKD*KTAVQI
Trigger: TATTTGAACCGCTGTCTTCAAGTCCTTTTCCCACCA...ATTTCCTGACAATTTCCCATGGAGAGGAGTGGGCAGGCAAACATCCTCTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CAA 90 bp TTAGTCTGCATGCTGGATTTCCAGATCCTCAATTCAAGGAGAGTGTTAGTCATTGCAACCAAAATGTTGTaGAGGAAACAGGCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: LVCMLDFQILNSRRVLVIATKML*RKQARG
Trigger: GCCTCTTGCCTGTTTCCTCAACAACATTTTGGTTGC...AATGACTAACACTCTCCTTGAATTGAGGATCTGGAAATCCAGCATGCAGACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CAA 90 bp AATTCCAAGCTGAAGCACAGATGTGACCATCTTAGTCTGCATGCTGGATTTCCAAAAGCAACCAAAATGTaGTTGAGGAAACAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: NSKLKHRCDHLSLHAGFPKATKM*LRKQAR
Trigger: TCTTGCCTGTTTCCTCAACAACATTTTGGTTGCTTT...TGGAAATCCAGCATGCAGACTAAGATGGTCACATCTGTGCTTCAGCTTGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS-3UTR CAA 90 bp TTCAGGGCAAGCATTTCTATCATCTTCATCTCAGACCAGCACACACTGTCTACTCAGAGACGTAAATCATaGAAAGCAACCAAAATGTTG +
Preference number: 5 (lower is better)
Translates to: FRASISIIFISDQHTLSTQRRKS*KATKML
Trigger: CAACATTTTGGTTGCTTTCAATGATTTACGTCTCTG...AGTAGACAGTGTGTGCTGGTCTGAGATGAAGATGATAGAAATGCTTGCCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS GCA 72 bp CGCCCGTCCCCATCAGGCCAGCCGCACCTGCAGCTCTaGTGGAAGCGGGGCAGACGGTCGAGCAGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: RPSPSGQPHLQL*WKRGRRSSRRP
Trigger: CGGGCGCCTGCTCGACCGTCTGCCCCGCTTCCAGCAGAGCTGCAGGTGCGGCTGGCCTGATGGGGACGGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134772.2
CDS CCA 72 bp GGCCCTCATCTTCCACCTCCCCCAGCGCGACGGCCGTaGCTGTCGTCGTGGCCGAAGCGGTCGTGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: GPHLPPPPARRP*LSSWPKRSWRA
Trigger: AGCCCTCCACGACCGCTTCGGCCACGACGACAGCCACGGCCGTCGCGCTGGGGGAGGTGGAAGATGAGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp TTGGCGAAAGCCAGGTCGCGCGTCTGCTGCAGCCGCTaGGCCCGCTCTTCCGCCAAGCGCTCGGGTTCGCGC +
Preference number: 6 (lower is better)
Translates to: LAKARSRVCCSR*ARSSAKRSGSR
Trigger: GCGCGAACCCGAGCGCTTGGCGGAAGAGCGGGCCCAGCGGCTGCAGCAGACGCGCGACCTGGCTTTCGCCAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
ENSMUST00000134772.2
CDS CCA 72 bp CGCCCGAGGGACGCCTCCACGTCGCCGAAGAGCCGGTaGATGCGCTCGGTGCACTCGGCCCCGCGAATGAAC +
Preference number: 6 (lower is better)
Translates to: RPRDASTSPKSR*MRSVHSAPRMN
Trigger: GTTCATTCGCGGGGCCGAGTGCACCGAGCGCATCCACCGGCTCTTCGGCGACGTGGAGGCGTCCCTCGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
ENSMUST00000134772.2
CDS CCA 72 bp GCTGCTCCCCAGGCTGCGGGCAGGGGACACTGCCTATaGCTCCTCCCTCACTCGGTGGCTCGGCTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: AAPQAAGRGHCL*LLPHSVARLAA
Trigger: CGCTGCCAGCCGAGCCACCGAGTGAGGGAGGAGCCATAGGCAGTGTCCCCTGCCCGCAGCCTGGGGAGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp CTCCATGCTCCGCTGCTCCGCAGGGAGCTCTGGAGCTaGGGCCACGAGGTCCGGCCCCAGCTCCTGCTCATC +
Preference number: 6 (lower is better)
Translates to: LHAPLLRRELWS*GHEVRPQLLLI
Trigger: GATGAGCAGGAGCTGGGGCCGGACCTCGTGGCCCCAGCTCCAGAGCTCCCTGCGGAGCAGCGGAGCATGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp TACAGGCTCCATGCTCCGCTGCTCCGCAGGGAGCTCTaGAGCTGGGGCCACGAGGTCCGGCCCCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: YRLHAPLLRREL*SWGHEVRPQLL
Trigger: CAGGAGCTGGGGCCGGACCTCGTGGCCCCAGCTCCAGAGCTCCCTGCGGAGCAGCGGAGCATGGAGCCTGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp GCAGGGGACACTGCCTATGGCTCCTCCCTCACTCGGTaGCTCGGCTGGCAGCGGCTCCCCCTCCATGGGCTC +
Preference number: 6 (lower is better)
Translates to: AGDTAYGSSLTR*LGWQRLPLHGL
Trigger: GAGCCCATGGAGGGGGAGCCGCTGCCAGCCGAGCCACCGAGTGAGGGAGGAGCCATAGGCAGTGTCCCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp ACTGCCTATGGCTCCTCCCTCACTCGGTGGCTCGGCTaGCAGCGGCTCCCCCTCCATGGGCTCCTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: TAYGSSLTRWLG*QRLPLHGLLRQ
Trigger: CTGCCTCAGGAGCCCATGGAGGGGGAGCCGCTGCCAGCCGAGCCACCGAGTGAGGGAGGAGCCATAGGCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS TCA 72 bp GCCGGTGGATGCGCTCGGTGCACTCGGCCCCGCGAATaGACGTCTTGTAGTTGGCGAAAGCCAGGTCGCGCG +
Preference number: 6 (lower is better)
Translates to: AGGCARCTRPRE*TSCSWRKPGRA
Trigger: CGCGCGACCTGGCTTTCGCCAACTACAAGACGTTCATTCGCGGGGCCGAGTGCACCGAGCGCATCCACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
ENSMUST00000134772.2
CDS CCA 72 bp CACCATCGGTGGCTGCAGCGTGCCTGGTTGTGTGGCTaGTACTGTGGCAGGCGTGTTACTGCTGCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: HHRWLQRAWLCG*YCGRRVTAAQD
Trigger: ATCCTGGGCAGCAGTAACACGCCTGCCACAGTACCAGCCACACAACCAGGCACGCTGCAGCCACCGATGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp AGAGCACCATCGGTGGCTGCAGCGTGCCTGGTTGTGTaGCTGGTACTGTGGCAGGCGTGTTACTGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: RAPSVAAACLVV*LVLWQACYCCP
Trigger: TGGGCAGCAGTAACACGCCTGCCACAGTACCAGCCACACAACCAGGCACGCTGCAGCCACCGATGGTGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp GTGCTGATTGCCACCCTCTGGAAAACAGGAGCCAACTaGCCGCGGAAATCAGCCCCCACCCGGCTAAAGGAC +
Preference number: 6 (lower is better)
Translates to: VLIATLWKTGAN*PRKSAPTRLKD
Trigger: GTCCTTTAGCCGGGTGGGGGCTGATTTCCGCGGCCAGTTGGCTCCTGTTTTCCAGAGGGTGGCAATCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS TCA 72 bp GCAGTCAGGATGGAGCGGAGCCAAGCATCCCGAGCCTaGAGAAATTTCACCCTCAACTCAGCCTCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: AVRMERSQASRA*RNFTLNSASVK
Trigger: CTTCACTGAGGCTGAGTTGAGGGTGAAATTTCTTCAGGCTCGGGATGCTTGGCTCCGCTCCATCCTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp TCAACTGCTTTCTGGAAAGTGCTGATTGCCACCCTCTaGAAAACAGGAGCCAACTGGCCGCGGAAATCAGCC +
Preference number: 6 (lower is better)
Translates to: STAFWKVLIATL*KTGANWPRKSA
Trigger: GGCTGATTTCCGCGGCCAGTTGGCTCCTGTTTTCCAGAGGGTGGCAATCAGCACTTTCCAGAAAGCAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp AGCAGGGGGTCCTCATCTGAGAAAATAGCACGGTACTaGGTGATGATATCAAAGAGATGGACCCGGCAAGCC +
Preference number: 6 (lower is better)
Translates to: SRGSSSEKIARY*VMISKRWTRQA
Trigger: GGCTTGCCGGGTCCATCTCTTTGATATCATCACCCAGTACCGTGCTATTTTCTCAGATGAGGACCCCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp ACTGTGAGATTTTCTGCAGCACCCATCCATGGAAGATaGCACCCTCATTCACAGTGTACTCGCCCATGGCAG +
Preference number: 6 (lower is better)
Translates to: TVRFSAAPIHGR*HPHSQCTRPWQ
Trigger: CTGCCATGGGCGAGTACACTGTGAATGAGGGTGCCATCTTCCATGGATGGGTGCTGCAGAAAATCTCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp TGCAGGAACTGTGAGATTTTCTGCAGCACCCATCCATaGAAGATGGCACCCTCATTCACAGTGTACTCGCCC +
Preference number: 6 (lower is better)
Translates to: CRNCEIFCSTHP*KMAPSFTVYSP
Trigger: GGGCGAGTACACTGTGAATGAGGGTGCCATCTTCCATGGATGGGTGCTGCAGAAAATCTCACAGTTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS TCA 72 bp TCTCCACTGCTTCTTCAACTGCTTTCTGGAAAGTGCTaGTTGCCACCCTCTGGAAAACAGGAGCCAACTGGC +
Preference number: 6 (lower is better)
Translates to: SPLLLQLLSGKC*LPPSGKQEPTG
Trigger: GCCAGTTGGCTCCTGTTTTCCAGAGGGTGGCAATCAGCACTTTCCAGAAAGCAGTTGAAGAAGCAGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp TGCTCCCCACTGCTGAACACAGCCTCTTCGGCTCGATaGAATGCCAGAATTGTTTTGGTTACCTTGGTAAGG +
Preference number: 6 (lower is better)
Translates to: CSPLLNTASSAR*NARIVLVTLVR
Trigger: CCTTACCAAGGTAACCAAAACAATTCTGGCATTCCATCGAGCCGAAGAGGCTGTGTTCAGCAGTGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp GTTTCTCTCTTAGGCAAAATAAAGGCGAGAGGTTCCTaGATGGCGCTGATGTTCACGTGTCCAAGGTTTCCG +
Preference number: 6 (lower is better)
Translates to: VSLLGKIKARGS*MALMFTCPRFP
Trigger: CGGAAACCTTGGACACGTGAACATCAGCGCCATCCAGGAACCTCTCGCCTTTATTTTGCCTAAGAGAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CAA 90 bp GTCACATCCTGTGCTAGAGCCACAGGGCAACAGAGACGTAAATCATaGAAAGCAACCAAAATGTTGTTGAGGAAACAGGCAAGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: VTSCARATGQQRRKS*KATKMLLRKQARGG
Trigger: CCCGCCTCTTGCCTGTTTCCTCAACAACATTTTGGTTGCTTTCAATGATTTACGTCTCTGTTGCCCTGTGGCTCTAGCACAGGATGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CAA 90 bp ACAGCCTCTTCGGCTCGATGGAATGCCAGAATTGTTTTGGTTACCTaGGTAAGGGCATTTTCCAAGGTCCCAGTCACATCCTGTGCTAGA +
Preference number: 6 (lower is better)
Translates to: TASSARWNARIVLVT*VRAFSKVPVTSCAR
Trigger: TCTAGCACAGGATGTGACTGGGACCTTGGAAAATGCCCTTACCAAGGTAACCAAAACAATTCTGGCATTCCATCGAGCCGAAGAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CAA 72 bp TCGGCTCGATGGAATGCCAGAATTGTTTTGGTTACCTaGGTAAGGGCATTTTCCAAGGTCCCAGTCACATCC +
Preference number: 6 (lower is better)
Translates to: SARWNARIVLVT*VRAFSKVPVTS
Trigger: GGATGTGACTGGGACCTTGGAAAATGCCCTTACCAAGGTAACCAAAACAATTCTGGCATTCCATCGAGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CAA 72 bp ACAGCCTCTTCGGCTCGATGGAATGCCAGAATTGTTTaGGTTACCTTGGTAAGGGCATTTTCCAAGGTCCCA +
Preference number: 6 (lower is better)
Translates to: TASSARWNARIV*VTLVRAFSKVP
Trigger: TGGGACCTTGGAAAATGCCCTTACCAAGGTAACCAAAACAATTCTGGCATTCCATCGAGCCGAAGAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CCA 72 bp AAAATAGCACGGTACTGGGTGATGATATCAAAGAGATaGACCCGGCAAGCCTCAATGGTTTTTGTGATGTGG +
Preference number: 6 (lower is better)
Translates to: KIARYWVMISKR*TRQASMVFVMW
Trigger: CCACATCACAAAAACCATTGAGGCTTGCCGGGTCCATCTCTTTGATATCATCACCCAGTACCGTGCTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12
CDS CAA 72 bp TGTGCTAGAGCCACAGGGCAACAGAGACGTAAATCATaGAAAGCAACCAAAATGTTGTTGAGGAAACAGGCA +
Preference number: 6 (lower is better)
Translates to: CARATGQQRRKS*KATKMLLRKQA
Trigger: TGCCTGTTTCCTCAACAACATTTTGGTTGCTTTCAATGATTTACGTCTCTGTTGCCCTGTGGCTCTAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034391.4
ENSMUST00000095517.12