RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COG7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034951

Ensembl transcript IDs: ENSMUST00000057576.8, ENSMUST00000205438.2

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAGAGGAGGTCTTCGCACAGAGCCCTGGGATACTGTAGGGAGATaGACCCTTCCTCCATCTTGTATTGCTGGTGGTCTTGGCAATCCC +
Preference number: 1 (lower is better)
Translates to: LRGGLRTEPWDTVGR*TLPPSCIAGGLGNP
Trigger: GGGATTGCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTCCCTACAGTATCCCAGGGCTCTGTGCGAAGACCTCCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR GCA 90 bp TGGGGGAGTCGGTTCTCTCCTTCTACCATACTGAATCCAACAGGTTaGAAGGCTTGGCATCAAGTGCTCTCACCTGCTGAGCCCTTGCCA +
Preference number: 1 (lower is better)
Translates to: WGSRFSPSTILNPTG*KAWHQVLSPAEPLP
Trigger: TGGCAAGGGCTCAGCAGGTGAGAGCACTTGATGCCAAGCCTTGCAACCTGTTGGATTCAGTATGGTAGAAGGAGAGAACCGACTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR TCA 90 bp CACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTaGGAGTCACCAGTCCTGTACCCTGTCCTGGACACTCTTCTCACA +
Preference number: 1 (lower is better)
Translates to: HTDTHTAPPLRMNPF*ESPVLYPVLDTLLT
Trigger: TGTGAGAAGAGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
3UTR CCA 90 bp CGGTTCTCTCCTTCTACCATACTGAATCCAACAGGTTGCAAGGCTTaGCATCAAGTGCTCTCACCTGCTGAGCCCTTGCCAGCCACTTTA +
Preference number: 1 (lower is better)
Translates to: RFSPSTILNPTGCKA*HQVLSPAEPLPATL
Trigger: TAAAGTGGCTGGCAAGGGCTCAGCAGGTGAGAGCACTTGATGCCAAGCCTTGCAACCTGTTGGATTCAGTATGGTAGAAGGAGAGAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CCA 90 bp TTGAGGTGGGCACACATGTACCACAGCCTGTATCAGAAGACAGCTTaGGGGAGTCGGTTCTCTCCTTCTACCATACTGAATCCAACAGGT +
Preference number: 1 (lower is better)
Translates to: LRWAHMYHSLYQKTA*GSRFSPSTILNPTG
Trigger: ACCTGTTGGATTCAGTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTACATGTGTGCCCACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR GCA 90 bp GTGGCATATCTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCTaGTGTGTGATAAGGACCACCAAAATGATTTGTAAGGCCCTGCTC +
Preference number: 1 (lower is better)
Translates to: VAYLCSSGAFPLPSS*CVIRTTKMICKALL
Trigger: GAGCAGGGCCTTACAAATCATTTTGGTGGTCCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAGATATGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CCA 90 bp TGTAGGGAGATGGACCCTTCCTCCATCTTGTATTGCTGGTGGTCTTaGCAATCCCATTACCTCTCTGACATCAGTAGACTCTTCAGTGGA +
Preference number: 1 (lower is better)
Translates to: CREMDPSSILYCWWS*QSHYLSDISRLFSG
Trigger: TCCACTGAAGAGTCTACTGATGTCAGAGAGGTAATGGGATTGCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTCCCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CCA 90 bp GGATACTGTAGGGAGATGGACCCTTCCTCCATCTTGTATTGCTGGTaGTCTTGGCAATCCCATTACCTCTCTGACATCAGTAGACTCTTC +
Preference number: 1 (lower is better)
Translates to: GYCREMDPSSILYCW*SWQSHYLSDISRLF
Trigger: GAAGAGTCTACTGATGTCAGAGAGGTAATGGGATTGCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTCCCTACAGTATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CCA 90 bp ATTTTTACATCGTGTCTTTGGAGACAGGACTGTGTCTTATACCCGTaGCATATCTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCT +
Preference number: 1 (lower is better)
Translates to: IFTSCLWRQDCVLYP*HISVPQGHFHFPVA
Trigger: AGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CCA 90 bp CCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGTCTTTaGAGACAGGACTGTGTCTTATACCCGTGGCATATCTCTGTTCCT +
Preference number: 1 (lower is better)
Translates to: PELSSVLSFIFTSCL*RQDCVLYPWHISVP
Trigger: AGGAACAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR GCA 90 bp TGCTACAGGGAAAAGAAGACAAAAGCAAGCAGTAACTCCCAAGTTTaGACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCAGGAC +
Preference number: 1 (lower is better)
Translates to: CYREKKTKASSNSQV*TLIFKVALESEFQD
Trigger: GTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGAGTTACTGCTTGCTTTTGTCTTCTTTTCCCTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR CCA 90 bp TATCTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGAGGCCCGGAAGGAGCTaGGTCCTGCCTGCTTGCCAC +
Preference number: 2 (lower is better)
Translates to: YLCSSGAFPLPSSCCVIRRPGRS*VLPACH
Trigger: GTGGCAAGCAGGCAGGACCCAGCTCCTTCCGGGCCT...CCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR TCA 90 bp ACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCATACGCCCTTGGCACTTGCTaGGCCAAGGTTGGCATTTGT +
Preference number: 2 (lower is better)
Translates to: TACIRRQLGGVGSLLLPYALGTC*AKVGIC
Trigger: ACAAATGCCAACCTTGGCTCAGCAAGTGCCAAGGGC...GTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR TCA 90 bp CCAAGTTGCATTCTTTGTCTTGAGGTGGGCACACATGTACCACAGCCTGTATCAAGTGCTCTCACCTGCTaGGCCCTTGCCAGCCACTTT +
Preference number: 2 (lower is better)
Translates to: PSCILCLEVGTHVPQPVSSALTC*ALASHF
Trigger: AAAGTGGCTGGCAAGGGCTCAGCAGGTGAGAGCACT...TGATACAGGCTGTGGTACATGTGTGCCCACCTCAAGACAAAGAATGCAACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR GCA 90 bp TTACATCGTGTCTTTGGAGACAGGACTGTGTCTTATACCCGTGGCATATCTCTGGAAGGAGCTGGGTCCTaGCTGCTTGCCACCTTAGGG +
Preference number: 2 (lower is better)
Translates to: LHRVFGDRTVSYTRGISLEGAGS*LLATLG
Trigger: CCCTAAGGTGGCAAGCAGGCAGGACCCAGCTCCTTC...CAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR GCA 90 bp TACCACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCCTGAATCCAACAGGTTaGAAGGCTTGGCATCAAGTG +
Preference number: 2 (lower is better)
Translates to: YHSLYQKTAWGSRFSPSTLNPTG*KAWHQV
Trigger: CACTTGATGCCAAGCCTTGCAACCTGTTGGATTCAG...GGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR TCA 90 bp GGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGACCACCAAAATGATTCTGCCTGAATTTTCATaGGGTAATGCATGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: GAFPLPSSCCVIRTTKMILPEFS*GNACRE
Trigger: CTCTCTGCATGCATTACCTCATGAAAATTCAGGCAG...AATCATTTTGGTGGTCCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR GCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTCACAGACACACACACTaGCCCACCACTGAGAATGAA +
Preference number: 2 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSHRHTH*PTTENE
Trigger: TTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTG...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
3UTR-3UTR GCA 90 bp TATCTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGCTCTCTCGGTTTTCCTaGCTGAATTTTCATGAGGTA +
Preference number: 2 (lower is better)
Translates to: YLCSSGAFPLPSSCCVIRLSRFS*LNFHEV
Trigger: TACCTCATGAAAATTCAGGCAGGAAAACCGAGAGAG...CCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR CCA 90 bp CACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGTCGATACTGTAGGGAGATaGACCCTTCCTCCATCTTGT +
Preference number: 2 (lower is better)
Translates to: HTGVQNSPASCLSFLHRVDTVGR*TLPPSC
Trigger: ACAAGATGGAGGAAGGGTCCATCTCCCTACAGTATC...GACACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CAA 90 bp TCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGTCTTaGGAGACAGGACTGTGTCTTATACCCGTGGCATATCTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: SRTLQRLVFHFYIVS*ETGLCLIPVAYLCS
Trigger: GGAACAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CAA 90 bp CAATGTGAAGTATGTTCACACTGGAGTCCAGAACTCTCCAGCGTCTaGTCTTTCATTTTTACATCGTGTCTTTGGAGACAGGACTGTGTC +
Preference number: 2 (lower is better)
Translates to: QCEVCSHWSPELSSV*SFIFTSCLWRQDCV
Trigger: GACACAGTCCTGTCTCCAAAGACACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTGAACATACTTCACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR GCA 90 bp GTTCACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTAGTAACTCCCAAGTTTaGACTCTTATCTTCAAGGTT +
Preference number: 2 (lower is better)
Translates to: VHTGVQNSPASCLSFLHRSNSQV*TLIFKV
Trigger: AACCTTGAAGATAAGAGTGCAAACTTGGGAGTTACT...ACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR GCA 72 bp GGAGCAAGGCCCGGAAGGAGCTGGGTCCTGCCTGCTTaGCACCTTAGGGAGGTAGACTCCAGTGAGTACAAA +
Preference number: 3 (lower is better)
Translates to: GARPGRSWVLPA*HLREVDSSEYK
Trigger: TTTGTACTCACTGGAGTCTACCTCCCTAAGGTGGCAAGCAGGCAGGACCCAGCTCCTTCCGGGCCTTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR CAA 90 bp GCAAGGCCCGGAAGGAGCTGGGTCCTGCCTGCTTGCCACCTTAGGGAGGTAGACCTTGCTGAGCCAAGGTaGGCATTTGTAATTGCTACA +
Preference number: 3 (lower is better)
Translates to: ARPGRSWVLPACHLREVDLAEPR*AFVIAT
Trigger: TGTAGCAATTACAAATGCCAACCTTGGCTCAGCAAG...GTCTACCTCCCTAAGGTGGCAAGCAGGCAGGACCCAGCTCCTTCCGGGCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR TCA 72 bp ATAGGCAGTAAGAGTCAGAGTCAGGGGAGGCTTGTCTaGGAGGAGGTCTTCGCACAGAGCCCTGGGATACTG +
Preference number: 3 (lower is better)
Translates to: IGSKSQSQGRLV*EEVFAQSPGIL
Trigger: CAGTATCCCAGGGCTCTGTGCGAAGACCTCCTCTCAGACAAGCCTCCCCTGACTCTGACTCTTACTGCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR TCA 72 bp AGGTTGCAAGGCTTGGCATCAAGTGCTCTCACCTGCTaGGCCCTTGCCAGCCACTTTAACCCACTTTTGAGC +
Preference number: 3 (lower is better)
Translates to: RLQGLASSALTC*ALASHFNPLLS
Trigger: GCTCAAAAGTGGGTTAAAGTGGCTGGCAAGGGCTCAGCAGGTGAGAGCACTTGATGCCAAGCCTTGCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR TCA 72 bp ACACACACTGCCCCACCACTGAGAATGAATCCATTCTaGGAGTCACCAGTCCTGTACCCTGTCCTGGACACT +
Preference number: 3 (lower is better)
Translates to: THTAPPLRMNPF*ESPVLYPVLDT
Trigger: AGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
3UTR TCA 72 bp CAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCATACTaGATCCAACAGGTTGCAAGGCTTGGCATCAAGTGC +
Preference number: 3 (lower is better)
Translates to: QLGGVGSLLLPY*IQQVARLGIKC
Trigger: GCACTTGATGCCAAGCCTTGCAACCTGTTGGATTCAGTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CCA 72 bp CCTTCTACCATACTGAATCCAACAGGTTGCAAGGCTTaGCATCAAGTGCTCTCACCTGCTGAGCCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: PSTILNPTGCKA*HQVLSPAEPLP
Trigger: TGGCAAGGGCTCAGCAGGTGAGAGCACTTGATGCCAAGCCTTGCAACCTGTTGGATTCAGTATGGTAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR GCA 72 bp ACACACACACACACACACACACACAGACACACACACTaGCCCACCACTGAGAATGAATCCATTCTGAGAGTC +
Preference number: 3 (lower is better)
Translates to: THTHTHTHRHTH*PTTENESILRV
Trigger: GACTCTCAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
3UTR GCA 72 bp TACTGTAGGGAGATGGACCCTTCCTCCATCTTGTATTaGTGGTGGTCTTGGCAATCCCATTACCTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: YCREMDPSSILY*WWSWQSHYLSD
Trigger: GTCAGAGAGGTAATGGGATTGCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTCCCTACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CCA 72 bp GCACACATGTACCACAGCCTGTATCAGAAGACAGCTTaGGGGAGTCGGTTCTCTCCTTCTACCATACTGAAT +
Preference number: 3 (lower is better)
Translates to: AHMYHSLYQKTA*GSRFSPSTILN
Trigger: ATTCAGTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTACATGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR CAA 90 bp CCAAGTTGCATTCTTTGTCTTGAGGTGGGCACACATGTACCACAGCCTGTATCAATCTTCAAGGTTGCCTaGGAAAGTGAGTTCCAGGAC +
Preference number: 3 (lower is better)
Translates to: PSCILCLEVGTHVPQPVSIFKVA*ESEFQD
Trigger: GTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGAT...TGATACAGGCTGTGGTACATGTGTGCCCACCTCAAGACAAAGAATGCAACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR-3UTR CAA 90 bp CCAAGTTGCATTCTTTGTCTTGAGGTGGGCACACATGTACCACAGCCTGTATCACTCTTATCTTCAAGGTaGCCTTGGAAAGTGAGTTCC +
Preference number: 3 (lower is better)
Translates to: PSCILCLEVGTHVPQPVSLLSSR*PWKVSS
Trigger: GGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAG...TGATACAGGCTGTGGTACATGTGTGCCCACCTCAAGACAAAGAATGCAACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR GCA 72 bp CTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCTaGTGTGTGATAAGGACCACCAAAATGATTTGTAAG +
Preference number: 3 (lower is better)
Translates to: LCSSGAFPLPSS*CVIRTTKMICK
Trigger: CTTACAAATCATTTTGGTGGTCCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR GCA 72 bp GCCAGCCACTTTAACCCACTTTTGAGCACTCAGTTCTaGAATGTGAAGTATGTTCACACTGGAGTCCAGAAC +
Preference number: 3 (lower is better)
Translates to: ASHFNPLLSTQF*NVKYVHTGVQN
Trigger: GTTCTGGACTCCAGTGTGAACATACTTCACATTGCAGAACTGAGTGCTCAAAAGTGGGTTAAAGTGGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR GCA 72 bp GTACCACCATGCTTGGCTTATGTACACATACCACCATaGCTAATTTCCAGTTCTCTCTCTCTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: VPPCLAYVHIPP*LISSSLSLSLS
Trigger: AGAGAGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAAGCATGGTGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
3UTR CCA 72 bp TCCAGCGTCTTGTCTTTCATTTTTACATCGTGTCTTTaGAGACAGGACTGTGTCTTATACCCGTGGCATATC +
Preference number: 3 (lower is better)
Translates to: SSVLSFIFTSCL*RQDCVLYPWHI
Trigger: GATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAAAAATGAAAGACAAGACGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR GCA 72 bp GAAAAGAAGACAAAAGCAAGCAGTAACTCCCAAGTTTaGACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: EKKTKASSNSQV*TLIFKVALESE
Trigger: CTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGAGTTACTGCTTGCTTTTGTCTTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp GCAAGGCCCGGAAGGAGCTGGGTCCTGCCTGCTTGCCACCTTAGGGAGGTAGACACCAGGTTGTGGTCCTaGAGATGGGGGAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ARPGRSWVLPACHLREVDTRLWS*RWGSSA
Trigger: GGCGCTGCTCCCCCATCTCCAGGACCACAACCTGGT...GTCTACCTCCCTAAGGTGGCAAGCAGGCAGGACCCAGCTCCTTCCGGGCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp ACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCATACACCAGGGTGGCTGCGTaGCCGTCCGCCTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: TACIRRQLGGVGSLLLPYTRVAA*PSAFPA
Trigger: GGCGGGGAAGGCGGACGGTCACGCAGCCACCCTGGT...GTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp GCAAGGCCCGGAAGGAGCTGGGTCCTGCCTGCTTGCCACCTTAGGGAGGTAGACCATCACGGAGCACTTTaGGCATGTTCTGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ARPGRSWVLPACHLREVDHHGAL*ACSGGP
Trigger: AGGCCCTCCAGAACATGCCCAAAGTGCTCCGTGATG...GTCTACCTCCCTAAGGTGGCAAGCAGGCAGGACCCAGCTCCTTCCGGGCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp GCAAGGCCCGGAAGGAGCTGGGTCCTGCCTGCTTGCCACCTTAGGGAGGTAGACTTGCTCAGGAGGGAATaGCAGCTTCCCAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: ARPGRSWVLPACHLREVDLLRRE*QLPSMQ
Trigger: TTGCATGCTGGGAAGCTGCCATTCCCTCCTGAGCAA...GTCTACCTCCCTAAGGTGGCAAGCAGGCAGGACCCAGCTCCTTCCGGGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp CATGGAGCAAGGCCCGGAAGGAGCTGGGTCCTGCCTGCTTGCCACCTTAGGGAGGAAACGAGCAGCAGCTaGTGTTTGATGCGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: HGARPGRSWVLPACHLREETSSS*CLMRKK
Trigger: CTTCTTGCGCATCAAACAGCAGCTGCTGCTCGTTTC...CTCCCTAAGGTGGCAAGCAGGCAGGACCCAGCTCCTTCCGGGCCTTGCTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp CATGGAGCAAGGCCCGGAAGGAGCTGGGTCCTGCCTGCTTGCCACCTTAGGGAGCATGCCGGTCAGCTTTaGAGAAATCACAGCTATGTC +
Preference number: 4 (lower is better)
Translates to: HGARPGRSWVLPACHLREHAGQL*RNHSYV
Trigger: GACATAGCTGTGATTTCTGCAAAGCTGACCGGCATG...CTCCCTAAGGTGGCAAGCAGGCAGGACCCAGCTCCTTCCGGGCCTTGCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp ACCACCATGCTTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTACCAGGGTGGCTGCGTaGCCGTCCGCCTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: TTMLGLCTHTTMPNFQFSTRVAA*PSAFPA
Trigger: GGCGGGGAAGGCGGACGGTCACGCAGCCACCCTGGT...AGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAAGCATGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp CCCACCACTGAGAATGAATCCATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTCATTACCAGGGTGGCTaGGTGACCGTCCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PTTENESILRVTSPVPCPHYQGG*VTVRLP
Trigger: GGGAAGGCGGACGGTCACGCAGCCACCCTGGTAATG...AGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp GATACTGTAGGGAGATGGACCCTTCCTCCATCTTGTATTGCTGGTGGTCTTGGCAACGATGCTACGATCTaGGGGCTGGCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DTVGRWTLPPSCIAGGLGNDATI*GLARAS
Trigger: GGAGGCCCTGGCCAGCCCCCAGATCGTAGCATCGTT...GCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTCCCTACAGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp TTGAGGTGGGCACACATGTACCACAGCCTGTATCAGAAGACAGCTTGGGGGAGTGAGCTGCCGGTCCAGTaGAAGGTCACTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: LRWAHMYHSLYQKTAWGSELPVQ*KVTLTQ
Trigger: CTGTGTCAGAGTGACCTTCCACTGGACCGGCAGCTC...ACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTACATGTGTGCCCACCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGCGGTGGCCAGTTGCTTaGTGGAGTGCGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILRWPVA*WSAGSP
Trigger: AGGTGACCCCGCACTCCACCAAGCAACTGGCCACCG...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp TACCACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCGAGTGGCTCAGCTCCTaGACGCAGTCAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: YHSLYQKTAWGSRFSPSTEWLSS*TQSITS
Trigger: GGAAGTGATTGACTGCGTTCAGGAGCTGAGCCACTC...GGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp GGCAATCCCATTACCTCTCTGACATCAGTAGACTCTTCAGTGGACGGGGCAGCTGTTTCCTCCACGGCGTaGTTCACCTCCTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: GNPITSLTSVDSSVDGAAVSSTA*FTSWMN
Trigger: GTTCATCCAGGAGGTGAACCACGCCGTGGAGGAAAC...AGCTGCCCCGTCCACTGAAGAGTCTACTGATGTCAGAGAGGTAATGGGATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp TACCACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCCCTGCCATGGGTTCTTaGCAGGGCTCTTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: YHSLYQKTAWGSRFSPSTPAMGS*QGSSCL
Trigger: CAGACAAGAAGAGCCCTGCCAAGAACCCATGGCAGG...GGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp ACACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCGCGGTCCAGTCTTCCTaGAACAGGGAGTTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: THTHTDTHTAPPLRMNPFAVQSS*NRELGG
Trigger: TCCTCCCAACTCCCTGTTTCAGGAAGACTGGACCGC...GAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp ACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCATACTCAGGGGCAGGGACATaGTGTACTGCCCAATGTTGC +
Preference number: 4 (lower is better)
Translates to: TACIRRQLGGVGSLLLPYSGAGT*CTAQCC
Trigger: GCAACATTGGGCAGTACATCATGTCCCTGCCCCTGA...GTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp ATTGCTGGTGGTCTTGGCAATCCCATTACCTCTCTGACATCAGTAGACTCTTCACATTACCAGGGTGGCTaGGTGACCGTCCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: IAGGLGNPITSLTSVDSSHYQGG*VTVRLP
Trigger: GGGAAGGCGGACGGTCACGCAGCCACCCTGGTAATG...TGAAGAGTCTACTGATGTCAGAGAGGTAATGGGATTGCCAAGACCACCAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp CCCACCACTGAGAATGAATCCATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGATTCCGCAGCAAGCTaGATCCTGGACTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: PTTENESILRVTSPVPCPDSAAS*ILDFTW
Trigger: CCAGGTGAAGTCCAGGATGCAGCTTGCTGCGGAATC...AGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp GATACTGTAGGGAGATGGACCCTTCCTCCATCTTGTATTGCTGGTGGTCTTGGCGATTCCGCAGCAAGCTaGATCCTGGACTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: DTVGRWTLPPSCIAGGLGDSAAS*ILDFTW
Trigger: CCAGGTGAAGTCCAGGATGCAGCTTGCTGCGGAATC...GCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTCCCTACAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp TATCTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGGCTGTCCTGAAAACCTaGCAGGCTCCGAGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: YLCSSGAFPLPSSCCVIRAVLKT*QAPRAV
Trigger: TACAGCCCTCGGAGCCTGGCAGGTTTTCAGGACAGC...CCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp CATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGGACACTCTTCTCACAATTGTGGCTGCAGGCCCAGTaGGTCCATCACGTTGATCAG +
Preference number: 4 (lower is better)
Translates to: HSESHQSCTLSWTLFSQLWLQAQ*VHHVDQ
Trigger: CTGATCAACGTGATGGACGCACTGGGCCTGCAGCCA...CAATTGTGAGAAGAGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp ACACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTTGTGGTCCTGGAGATaGGGGAGCAGCGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: THTHTDTHTAPPLRMNPFLWSWR*GSSAIS
Trigger: GGAAATGGCGCTGCTCCCCCATCTCCAGGACCACAA...GAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp TCTTGGCAATCCCATTACCTCTCTGACATCAGTAGACTCTTCAGTGGACGGGGCACTTTCACCAGGTTGTaGTCCTGGAGATGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SWQSHYLSDISRLFSGRGTFTRL*SWRWGS
Trigger: GCTCCCCCATCTCCAGGACCACAACCTGGTGAAAGT...GCCCCGTCCACTGAAGAGTCTACTGATGTCAGAGAGGTAATGGGATTGCCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTAGCTGGTGGGCCTGCTaGTTCAGCCGGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSSWWAC*FSRVRA
Trigger: AGCCCTGACCCGGCTGAACCAGCAGGCCCACCAGCT...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp TTACATCGTGTCTTTGGAGACAGGACTGTGTCTTATACCCGTGGCATATCTCTGCGGTGGCCAGTTGCTTaGTGGAGTGCGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: LHRVFGDRTVSYTRGISLRWPVA*WSAGSP
Trigger: AGGTGACCCCGCACTCCACCAAGCAACTGGCCACCG...CAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp GTAGATACTGAGTCTCTAGTCCAGGATGACATCACACTCACAGTAATCCTGTTGGGCTGCAAGGCGGCGTaGCAGGCCTTTGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: VDTESLVQDDITLTVILLGCKAA*QAFADL
Trigger: CAGGTCAGCAAAGGCCTGCCACGCCGCCTTGCAGCC...CAACAGGATTACTGTGAGTGTGATGTCATCCTGGACTAGAGACTCAGTATCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp TTGAGGTGGGCACACATGTACCACAGCCTGTATCAGAAGACAGCTTGGGGGAGTGGTTCACCTCCTGGATaGACAGCTGCAGCTTCATTA +
Preference number: 4 (lower is better)
Translates to: LRWAHMYHSLYQKTAWGSGSPPG*TAAASL
Trigger: TAATGAAGCTGCAGCTGTTCATCCAGGAGGTGAACC...ACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTACATGTGTGCCCACCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp CATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGGACACTCTTCTCACAATTGGAGTGGCTCAGCTCCTaGACGCAGTCAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: HSESHQSCTLSWTLFSQLEWLSS*TQSITS
Trigger: GGAAGTGATTGACTGCGTTCAGGAGCTGAGCCACTC...CAATTGTGAGAAGAGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp CATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGGACACTCTTCTCACAATTGGTCAAGATGCTGTCCTaGAAACCTGCCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: HSESHQSCTLSWTLFSQLVKMLS*KPARLR
Trigger: TCGGAGCCTGGCAGGTTTTCAGGACAGCATCTTGAC...CAATTGTGAGAAGAGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp ACCACCATGCTTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTGTTCTGGAGGGTTCGTaGTGGCTGCAGGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TTMLGLCTHTTMPNFQFSVLEGS*WLQAQC
Trigger: GCACTGGGCCTGCAGCCATCACGAACCCTCCAGAAC...AGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAAGCATGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp CCCACCACTGAGAATGAATCCATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTATCCTGTTTGCCAGCTaGTGCTCAAAGTCCCCACAC +
Preference number: 4 (lower is better)
Translates to: PTTENESILRVTSPVPCPILFAS*CSKSPH
Trigger: GTGTGGGGACTTTGAGCAGCAGCTGGCAAACAGGAT...AGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGGTTTCCTCCACGGCGTaGTTCACCTCCTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILVSSTA*FTSWMN
Trigger: GTTCATCCAGGAGGTGAACCACGCCGTGGAGGAAAC...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGCATCACGGAGCACTTTaGGCATGTTCTGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILHHGAL*ACSGGP
Trigger: AGGCCCTCCAGAACATGCCCAAAGTGCTCCGTGATG...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp GCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTCCTACGATCTGGGGGCTaGCCAGGGCCTCCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: AYVHIPPCLISSSLSLSLLRSGG*PGPPVC
Trigger: ACAGACTGGAGGCCCTGGCCAGCCCCCAGATCGTAG...GAGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp ACCACCATGCTTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTAACGATGCTACGATCTaGGGGCTGGCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TTMLGLCTHTTMPNFQFSNDATI*GLARAS
Trigger: GGAGGCCCTGGCCAGCCCCCAGATCGTAGCATCGTT...AGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAAGCATGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp TCCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCAGGACACCTGTGTGGCCCACTaGGTTTGTGTGTGCCACGCG +
Preference number: 4 (lower is better)
Translates to: SQVCTLIFKVALESEFQDTCVAH*VCVCHA
Trigger: CGCGTGGCACACACAAACCCAGTGGGCCACACAGGT...GTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp CATCACACTCACAGTAATCCTGTTGCCCCTACCTCCCAAGGGATTATAGACATGCCATTTCCAGCCCCTTaGCAAAGTGGGCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: HHTHSNPVAPTSQGIIDMPFPAP*QSGRWC
Trigger: ACACCACCGCCCACTTTGCCAAGGGGCTGGAAATGG...CATGTCTATAATCCCTTGGGAGGTAGGGGCAACAGGATTACTGTGAGTGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTACCAGGTTGTGGTCCTaGAGATGGGGGAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSTRLWS*RWGSSA
Trigger: GGCGCTGCTCCCCCATCTCCAGGACCACAACCTGGT...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGACTTTCACCAGGTTGTaGTCCTGGAGATGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILTFTRL*SWRWGS
Trigger: GCTCCCCCATCTCCAGGACCACAACCTGGTGAAAGT...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp AGTAACTCCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCAGCTGGTGGGCCTGCTaGTTCAGCCGGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SNSQVCTLIFKVALESEFSWWAC*FSRVRA
Trigger: AGCCCTGACCCGGCTGAACCAGCAGGCCCACCAGCT...GAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGAGTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp TTACATCGTGTCTTTGGAGACAGGACTGTGTCTTATACCCGTGGCATATCTCTGCATCATAGAGGCCAGTaGGCTGCCGGTCCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LHRVFGDRTVSYTRGISLHHRGQ*AAGPVE
Trigger: TTCCACTGGACCGGCAGCTCACTGGCCTCTATGATG...CAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp AGCACTCAGTTCTGCAATGTGAAGTATGTTCACACTGGAGTCCAGAACTCTCCAGCGGTCCAGTCTTCCTaGAACAGGGAGTTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: STQFCNVKYVHTGVQNSPAVQSS*NRELGG
Trigger: TCCTCCCAACTCCCTGTTTCAGGAAGACTGGACCGC...TGGAGAGTTCTGGACTCCAGTGTGAACATACTTCACATTGCAGAACTGAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGGTGGCAGGCCTTTGCTaGCCTGTCTATATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILVAGLC*PVYIPQ
Trigger: CTGAGGAATATAGACAGGTCAGCAAAGGCCTGCCAC...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp ACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCATACACACTTGTAGTAGTATaGAAGGAGCTGGGGCATCCG +
Preference number: 4 (lower is better)
Translates to: TACIRRQLGGVGSLLLPYTLVVV*KELGHP
Trigger: CGGATGCCCCAGCTCCTTGCATACTACTACAAGTGT...GTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGGGACAGGATCCTGTTTaGCAGCTGCTGCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILGQDPV*QLLLKV
Trigger: GACTTTGAGCAGCAGCTGGCAAACAGGATCCTGTCC...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp CCCACCACTGAGAATGAATCCATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTACTTTGGGCATGTTCTaGAGGGCCTGGAGACTTGTT +
Preference number: 4 (lower is better)
Translates to: PTTENESILRVTSPVPCPTLGMF*RAWRLV
Trigger: AACAAGTCTCCAGGCCCTCCAGAACATGCCCAAAGT...AGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp AGTAACTCCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCTACGATCTGGGGGCTaGCCAGGGCCTCCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SNSQVCTLIFKVALESEFLRSGG*PGPPVC
Trigger: ACAGACTGGAGGCCCTGGCCAGCCCCCAGATCGTAG...GAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGAGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGTGGCAAAGTGGGCGGTaGTGTCGTAAAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILWQSGR*CRKTPA
Trigger: TGCTGGAGTTTTACGACACCACCGCCCACTTTGCCA...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp CACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGTCCCATTTCCAGCCCCTTaGCAAAGTGGGCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: HTGVQNSPASCLSFLHRVPFPAP*QSGRWC
Trigger: ACACCACCGCCCACTTTGCCAAGGGGCTGGAAATGG...GACACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp CATCACACTCACAGTAATCCTGTTGCCCCTACCTCCCAAGGGATTATAGACATGCCTGCCATGGGTTCTTaGCAGGGCTCTTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: HHTHSNPVAPTSQGIIDMPAMGS*QGSSCL
Trigger: CAGACAAGAAGAGCCCTGCCAAGAACCCATGGCAGG...CATGTCTATAATCCCTTGGGAGGTAGGGGCAACAGGATTACTGTGAGTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
3UTR CAA 72 bp GGCACACATGTACCACAGCCTGTATCAGAAGACAGCTaGGGGGAGTCGGTTCTCTCCTTCTACCATACTGAA +
Preference number: 4 (lower is better)
Translates to: GTHVPQPVSEDS*GESVLSFYHTE
Trigger: TTCAGTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTACATGTGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp CCAAGTTGCATTCTTTGTCTTGAGGTGGGCACACATGTACCACAGCCTGTATCAAGTGGAAGGTCACTCTaGCACAGCTCTTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: PSCILCLEVGTHVPQPVSSGRSL*HSSCQV
Trigger: AACCTGGCAAGAGCTGTGTCAGAGTGACCTTCCACT...TGATACAGGCTGTGGTACATGTGTGCCCACCTCAAGACAAAGAATGCAACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp GCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTCCATCATAGAGGCCAGTaGGCTGCCGGTCCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: AYVHIPPCLISSSLSLSLHHRGQ*AAGPVE
Trigger: TTCCACTGGACCGGCAGCTCACTGGCCTCTATGATG...GAGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGTCCCCAGGCCATTGGTaGATTTGGCACATCTGTCAA +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILSPGHW*IWHICQ
Trigger: TTGACAGATGTGCCAAATTCACCAATGGCCTGGGGA...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp TTACATCGTGTCTTTGGAGACAGGACTGTGTCTTATACCCGTGGCATATCTCTGGTCAAGATGCTGTCCTaGAAACCTGCCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: LHRVFGDRTVSYTRGISLVKMLS*KPARLR
Trigger: TCGGAGCCTGGCAGGTTTTCAGGACAGCATCTTGAC...CAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp CATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGGACACTCTTCTCACAATTGACACTTGTAGTAGTATaGAAGGAGCTGGGGCATCCG +
Preference number: 4 (lower is better)
Translates to: HSESHQSCTLSWTLFSQLTLVVV*KELGHP
Trigger: CGGATGCCCCAGCTCCTTGCATACTACTACAAGTGT...CAATTGTGAGAAGAGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp CCAAGTTGCATTCTTTGTCTTGAGGTGGGCACACATGTACCACAGCCTGTATCAAAGCCAAAGAGCTTGTaGACAGAGTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSCILCLEVGTHVPQPVSKPKSL*TEWLSS
Trigger: GGAGCTGAGCCACTCTGTGCACAAGCTCTTTGGCTT...TGATACAGGCTGTGGTACATGTGTGCCCACCTCAAGACAAAGAATGCAACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp GCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTCGCTGTCCTGAAAACCTaGCAGGCTCCGAGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: AYVHIPPCLISSSLSLSLAVLKT*QAPRAV
Trigger: TACAGCCCTCGGAGCCTGGCAGGTTTTCAGGACAGC...GAGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp CATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGGACACTCTTCTCACAATTGGAAACGAGCAGCAGCTaGTGTTTGATGCGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: HSESHQSCTLSWTLFSQLETSSS*CLMRKK
Trigger: CTTCTTGCGCATCAAACAGCAGCTGCTGCTCGTTTC...CAATTGTGAGAAGAGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp GGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGACCACCAAAATGATTGGCAGCTTCCCAGCATaGAAGGCCAACTCTAATGCA +
Preference number: 4 (lower is better)
Translates to: GAFPLPSSCCVIRTTKMIGSFPA*KANSNA
Trigger: TGCATTAGAGTTGGCCTTGCATGCTGGGAAGCTGCC...AATCATTTTGGTGGTCCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp ATTGCTGGTGGTCTTGGCAATCCCATTACCTCTCTGACATCAGTAGACTCTTCAGGAAGTTCATCCCCTTaGTCAGGAGGGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: IAGGLGNPITSLTSVDSSGSSSP*SGGNGS
Trigger: GCTGCCATTCCCTCCTGAGCAAGGGGATGAACTTCC...TGAAGAGTCTACTGATGTCAGAGAGGTAATGGGATTGCCAAGACCACCAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp TTACATCGTGTCTTTGGAGACAGGACTGTGTCTTATACCCGTGGCATATCTCTGGCGTGGTTCACCTCCTaGATGAACAGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LHRVFGDRTVSYTRGISLAWFTS*MNSCSF
Trigger: GAAGCTGCAGCTGTTCATCCAGGAGGTGAACCACGC...CAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp TTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTACCTGTGTGGCCCACTaGGTTTGTGTGTGCCACGCG +
Preference number: 4 (lower is better)
Translates to: LAYVHIPPCLISSSLSLSTCVAH*VCVCHA
Trigger: CGCGTGGCACACACAAACCCAGTGGGCCACACAGGT...AGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp TTCACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGTTGTGGTCCTGGAGATaGGGGAGCAGCGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: FTLESRTLQRLVFHFYIVLWSWR*GSSAIS
Trigger: GGAAATGGCGCTGCTCCCCCATCTCCAGGACCACAA...CACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CAA 72 bp GCAGTAACTCCCAAGTTTGCACTCTTATCTTCAAGGTaGCCTTGGAAAGTGAGTTCCAGGACAGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AVTPKFALLSSR*PWKVSSRTEPG
Trigger: CCCTGGCTCTGTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGAGTTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp CCAAGTTGCATTCTTTGTCTTGAGGTGGGCACACATGTACCACAGCCTGTATCATCCCCAGGCCATTGGTaGATTTGGCACATCTGTCAA +
Preference number: 4 (lower is better)
Translates to: PSCILCLEVGTHVPQPVSSPGHW*IWHICQ
Trigger: TTGACAGATGTGCCAAATTCACCAATGGCCTGGGGA...TGATACAGGCTGTGGTACATGTGTGCCCACCTCAAGACAAAGAATGCAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp CCCACCACTGAGAATGAATCCATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTTGGAGCCCTTCTCCTTaGGGGTATAAAGTATTTCCA +
Preference number: 4 (lower is better)
Translates to: PTTENESILRVTSPVPCPWSPSP*GYKVFP
Trigger: TGGAAATACTTTATACCCTCAAGGAGAAGGGCTCCA...AGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTGCAGCAGCTGCTGTTTaGTGCGCAAGAAGACCGAGT +
Preference number: 4 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSAAAAV*CARRPS
Trigger: ACTCGGTCTTCTTGCGCATCAAACAGCAGCTGCTGC...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp GTTCACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGCAGCAGCTGCTGTTTaGTGCGCAAGAAGACCGAGT +
Preference number: 4 (lower is better)
Translates to: VHTGVQNSPASCLSFLHRAAAAV*CARRPS
Trigger: ACTCGGTCTTCTTGCGCATCAAACAGCAGCTGCTGC...ACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp GCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTCTCAGGGGCAGGGACATaGTGTACTGCCCAATGTTGC +
Preference number: 4 (lower is better)
Translates to: AYVHIPPCLISSSLSLSLSGAGT*CTAQCC
Trigger: GCAACATTGGGCAGTACATCATGTCCCTGCCCCTGA...GAGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp GATACTGTAGGGAGATGGACCCTTCCTCCATCTTGTATTGCTGGTGGTCTTGGCAATGCAGAGTCCTCTTaGGTCACAAATGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: DTVGRWTLPPSCIAGGLGNAESS*VTNGSR
Trigger: TCTTGAGCCATTTGTGACTCAAGAGGACTCTGCATT...GCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTCCCTACAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGTCAAGCTGTTCTGCATaGCGGTCAGCTTTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILSSCSA*RSALQK
Trigger: TTTCTGCAAAGCTGACCGGCATGCAGAACAGCTTGA...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp CACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGTCATCCTGTTTGCCAGCTaGTGCTCAAAGTCCCCACAC +
Preference number: 4 (lower is better)
Translates to: HTGVQNSPASCLSFLHRVILFAS*CSKSPH
Trigger: GTGTGGGGACTTTGAGCAGCAGCTGGCAAACAGGAT...GACACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp CCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCAGGACAGGACAGGATCCTGTTTaGCAGCTGCTGCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PKFALLSSRLPWKVSSRTGQDPV*QLLLKV
Trigger: GACTTTGAGCAGCAGCTGGCAAACAGGATCCTGTCC...TGTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp GCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTCGGAAGTTCATCCCCTTaGTCAGGAGGGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: AYVHIPPCLISSSLSLSLGSSSP*SGGNGS
Trigger: GCTGCCATTCCCTCCTGAGCAAGGGGATGAACTTCC...GAGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTGCGTGGTTCACCTCCTaGATGAACAGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSAWFTS*MNSCSF
Trigger: GAAGCTGCAGCTGTTCATCCAGGAGGTGAACCACGC...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp CATCACACTCACAGTAATCCTGTTGCCCCTACCTCCCAAGGGATTATAGACATGATCCTGGACTTCACCTaGTCAATCTCTACCAGCACC +
Preference number: 4 (lower is better)
Translates to: HHTHSNPVAPTSQGIIDMILDFT*SISTST
Trigger: GGTGCTGGTAGAGATTGACCAGGTGAAGTCCAGGAT...CATGTCTATAATCCCTTGGGAGGTAGGGGCAACAGGATTACTGTGAGTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp TTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTGAGCTGCCGGTCCAGTaGAAGGTCACTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: LAYVHIPPCLISSSLSLSELPVQ*KVTLTQ
Trigger: CTGTGTCAGAGTGACCTTCCACTGGACCGGCAGCTC...AGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp TTTCCAAGTTGCATTCTTTGTCTTGAGGTGGGCACACATGTACCACAGCCTGTATGGCAAAGTGGGCGGTaGTGTCGTAAAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FPSCILCLEVGTHVPQPVWQSGR*CRKTPA
Trigger: TGCTGGAGTTTTACGACACCACCGCCCACTTTGCCA...TACAGGCTGTGGTACATGTGTGCCCACCTCAAGACAAAGAATGCAACTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp CCCACCACTGAGAATGAATCCATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTATTATATTCCTGCCATaGGTTCTTGGCAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PTTENESILRVTSPVPCPIIFLP*VLGRAL
Trigger: AAGAGCCCTGCCAAGAACCCATGGCAGGAATATAAT...AGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp GAGATGGACCCTTCCTCCATCTTGTATTGCTGGTGGTCTTGGCAATCCCATTACTGGAGCCCTTCTCCTTaGGGGTATAAAGTATTTCCA +
Preference number: 4 (lower is better)
Translates to: EMDPSSILYCWWSWQSHYWSPSP*GYKVFP
Trigger: TGGAAATACTTTATACCCTCAAGGAGAAGGGCTCCA...GTAATGGGATTGCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp GTAGATACTGAGTCTCTAGTCCAGGATGACATCACACTCACAGTAATCCTGTTGATCTCTACCAGCACCTaGATGGACTGTGACGTGTCC +
Preference number: 4 (lower is better)
Translates to: VDTESLVQDDITLTVILLISTST*MDCDVS
Trigger: GGACACGTCACAGTCCATGCAGGTGCTGGTAGAGAT...CAACAGGATTACTGTGAGTGTGATGTCATCCTGGACTAGAGACTCAGTATCTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp CATCACACTCACAGTAATCCTGTTGCCCCTACCTCCCAAGGGATTATAGACATGCATGCCGGTCAGCTTTaGAGAAATCACAGCTATGTC +
Preference number: 4 (lower is better)
Translates to: HHTHSNPVAPTSQGIIDMHAGQL*RNHSYV
Trigger: GACATAGCTGTGATTTCTGCAAAGCTGACCGGCATG...CATGTCTATAATCCCTTGGGAGGTAGGGGCAACAGGATTACTGTGAGTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTAAGCCAAAGAGCTTGTaGACAGAGTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSKPKSL*TEWLSS
Trigger: GGAGCTGAGCCACTCTGTGCACAAGCTCTTTGGCTT...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp TTACATCGTGTCTTTGGAGACAGGACTGTGTCTTATACCCGTGGCATATCTCTGGTCAACAGCTGCAGATaGCAAGCCAAAGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LHRVFGDRTVSYTRGISLVNSCR*QAKELV
Trigger: CACAAGCTCTTTGGCTTGGCATCTGCAGCTGTTGAC...CAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp CATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGGACACTCTTCTCACAATTGAGGGACATGATGTACTaGCCAATGTTGCTGATGTAC +
Preference number: 4 (lower is better)
Translates to: HSESHQSCTLSWTLFSQLRDMMY*PMLLMY
Trigger: GTACATCAGCAACATTGGGCAGTACATCATGTCCCT...CAATTGTGAGAAGAGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp GAGCCCTTGGCACTTGCTGAGCCAAGGTTGGCATTTGTAATTGCTACAGGGAAAAGGGACATGATGTACTaGCCAATGTTGCTGATGTAC +
Preference number: 4 (lower is better)
Translates to: EPLALAEPRLAFVIATGKRDMMY*PMLLMY
Trigger: GTACATCAGCAACATTGGGCAGTACATCATGTCCCT...TTTCCCTGTAGCAATTACAAATGCCAACCTTGGCTCAGCAAGTGCCAAGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTGGCAGCTTCCCAGCATaGAAGGCCAACTCTAATGCA +
Preference number: 4 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSGSFPA*KANSNA
Trigger: TGCATTAGAGTTGGCCTTGCATGCTGGGAAGCTGCC...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp TCCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCAGGACATCCTGGACTTCACCTaGTCAATCTCTACCAGCACC +
Preference number: 4 (lower is better)
Translates to: SQVCTLIFKVALESEFQDILDFT*SISTST
Trigger: GGTGCTGGTAGAGATTGACCAGGTGAAGTCCAGGAT...GTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp GTAGATACTGAGTCTCTAGTCCAGGATGACATCACACTCACAGTAATCCTGTTGTTGCTCAGGAGGGAATaGCAGCTTCCCAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: VDTESLVQDDITLTVILLLLRRE*QLPSMQ
Trigger: TTGCATGCTGGGAAGCTGCCATTCCCTCCTGAGCAA...CAACAGGATTACTGTGAGTGTGATGTCATCCTGGACTAGAGACTCAGTATCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp ACCACCATGCTTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTGGTTCACCTCCTGGATaGACAGCTGCAGCTTCATTA +
Preference number: 4 (lower is better)
Translates to: TTMLGLCTHTTMPNFQFSGSPPG*TAAASL
Trigger: TAATGAAGCTGCAGCTGTTCATCCAGGAGGTGAACC...AGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAAGCATGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp TTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTAGTGGAAGGTCACTCTaGCACAGCTCTTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LAYVHIPPCLISSSLSLSSGRSL*HSSCQV
Trigger: AACCTGGCAAGAGCTGTGTCAGAGTGACCTTCCACT...AGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp GAGATGGACCCTTCCTCCATCTTGTATTGCTGGTGGTCTTGGCAATCCCATTACGACTGTGACGTGTCCTaGTCAAACTTTTTAATGTCC +
Preference number: 4 (lower is better)
Translates to: EMDPSSILYCWWSWQSHYDCDVS*SNFLMS
Trigger: GGACATTAAAAAGTTTGAGCAGGACACGTCACAGTC...GTAATGGGATTGCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp CCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCAGGACATCAAGCTGTTCTGCATaGCGGTCAGCTTTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PKFALLSSRLPWKVSSRTSSCSA*RSALQK
Trigger: TTTCTGCAAAGCTGACCGGCATGCAGAACAGCTTGA...TGTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp GTAGATACTGAGTCTCTAGTCCAGGATGACATCACACTCACAGTAATCCTGTTGGTCAACAGCTGCAGATaGCAAGCCAAAGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: VDTESLVQDDITLTVILLVNSCR*QAKELV
Trigger: CACAAGCTCTTTGGCTTGGCATCTGCAGCTGTTGAC...CAACAGGATTACTGTGAGTGTGATGTCATCCTGGACTAGAGACTCAGTATCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp CCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCAGGACAACATCTGTCAACAGCTaGAGATGCCAAGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PKFALLSSRLPWKVSSRTTSVNS*RCQAKE
Trigger: CTCTTTGGCTTGGCATCTGCAGCTGTTGACAGATGT...TGTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGGAATGTCATCCAGCTTaGACTTCTTTCGAATGGACT +
Preference number: 4 (lower is better)
Translates to: THTHRHTHCPTTENESILECHPA*TSFEWT
Trigger: AGTCCATTCGAAAGAAGTGCAAGCTGGATGACATTC...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp TATCTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGGAATGTCATCCAGCTTaGACTTCTTTCGAATGGACT +
Preference number: 4 (lower is better)
Translates to: YLCSSGAFPLPSSCCVIRECHPA*TSFEWT
Trigger: AGTCCATTCGAAAGAAGTGCAAGCTGGATGACATTC...CCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp CCAAGTTGCATTCTTTGTCTTGAGGTGGGCACACATGTACCACAGCCTGTATCATCTTGTCTGTCAAGATaGTGTCCTGAAAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: PSCILCLEVGTHVPQPVSSCLSR*CPENLP
Trigger: TGGCAGGTTTTCAGGACAGCATCTTGACAGACAAGA...TGATACAGGCTGTGGTACATGTGTGCCCACCTCAAGACAAAGAATGCAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp TTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTATGTTCTGGAGGGCCTaGAGACTTGTTTCCTCCACG +
Preference number: 4 (lower is better)
Translates to: LAYVHIPPCLISSSLSLSMFWRA*RLVSST
Trigger: CGTGGAGGAAACAAGTCTCCAGGCCCTCCAGAACAT...AGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp GTTCACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTACTTTGGGCATGTTCTaGAGGGCCTGGAGACTTGTT +
Preference number: 4 (lower is better)
Translates to: VHTGVQNSPASCLSFLHRTLGMF*RAWRLV
Trigger: AACAAGTCTCCAGGCCCTCCAGAACATGCCCAAAGT...ACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp GGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGACCACCAAAATGATTATTATATTCCTGCCATaGGTTCTTGGCAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GAFPLPSSCCVIRTTKMIIIFLP*VLGRAL
Trigger: AAGAGCCCTGCCAAGAACCCATGGCAGGAATATAAT...AATCATTTTGGTGGTCCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp AGCACTCAGTTCTGCAATGTGAAGTATGTTCACACTGGAGTCCAGAACTCTCCACTCTTGAGTCACAAATaGCTCAAGATTCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: STQFCNVKYVHTGVQNSPLLSHK*LKIQGQ
Trigger: CTGCCCCTGAATCTTGAGCCATTTGTGACTCAAGAG...TGGAGAGTTCTGGACTCCAGTGTGAACATACTTCACATTGCAGAACTGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR TCA 90 bp ACACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCCTATGTCTTGAGTTTTaGAGGTCTCCTCAATATCAG +
Preference number: 4 (lower is better)
Translates to: THTHTDTHTAPPLRMNPFLCLEF*RSPQYQ
Trigger: CTGATATTGAGGAGACCTTCAAAACTCAAGACATAG...GAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTACATCTGTCAACAGCTaGAGATGCCAAGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSTSVNS*RCQAKE
Trigger: CTCTTTGGCTTGGCATCTGCAGCTGTTGACAGATGT...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp CCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCAGGACAAGTGAGACACATACTTaGCAAAGAGGGATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PKFALLSSRLPWKVSSRTSETHT*QRGISG
Trigger: CCCTGAAATCCCTCTTTGCCAAGTATGTGTCTCACT...TGTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CCA 90 bp GCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTCCTCTTGAGTCACAAATaGCTCAAGATTCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AYVHIPPCLISSSLSLSLLLSHK*LKIQGQ
Trigger: CTGCCCCTGAATCTTGAGCCATTTGTGACTCAAGAG...GAGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR TCA 90 bp GTAGATACTGAGTCTCTAGTCCAGGATGACATCACACTCACAGTAATCCTGTTGAATGCAGAGTCCTCTTaGGTCACAAATGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: VDTESLVQDDITLTVILLNAESS*VTNGSR
Trigger: TCTTGAGCCATTTGTGACTCAAGAGGACTCTGCATT...CAACAGGATTACTGTGAGTGTGATGTCATCCTGGACTAGAGACTCAGTATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR GCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTTCTTGTCTGTCAAGATaGTGTCCTGAAAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSSCLSR*CPENLP
Trigger: TGGCAGGTTTTCAGGACAGCATCTTGACAGACAAGA...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp GCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTCAGTGAGACACATACTTaGCAAAGAGGGATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AYVHIPPCLISSSLSLSLSETHT*QRGISG
Trigger: CCCTGAAATCCCTCTTTGCCAAGTATGTGTCTCACT...GAGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp TCTTGGCAATCCCATTACCTCTCTGACATCAGTAGACTCTTCAGTGGACGGGGCGTATTTCCATTAAACTaGCATATTCAGCAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: SWQSHYLSDISRLFSGRGVFPLN*HIQQGY
Trigger: ATAACCCTGCTGAATATGCCAGTTTAATGGAAATAC...GCCCCGTCCACTGAAGAGTCTACTGATGTCAGAGAGGTAATGGGATTGCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CAA 72 bp CTCCAGCGTCTTGTCTTTCATTTTTACATCGTGTCTTaGGAGACAGGACTGTGTCTTATACCCGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: LQRLVFHFYIVS*ETGLCLIPVAY
Trigger: ATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAAAAATGAAAGACAAGACGCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
3UTR CAA 72 bp GTATGTTCACACTGGAGTCCAGAACTCTCCAGCGTCTaGTCTTTCATTTTTACATCGTGTCTTTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: VCSHWSPELSSV*SFIFTSCLWRQ
Trigger: CTGTCTCCAAAGACACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTGAACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR GCA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTGACTGTGACGTGTCCTaGTCAAACTTTTTAATGTCC +
Preference number: 4 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSDCDVS*SNFLMS
Trigger: GGACATTAAAAAGTTTGAGCAGGACACGTCACAGTC...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CCA 90 bp CATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGGACACTCTTCTCACAATTGGTATTTCCATTAAACTaGCATATTCAGCAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: HSESHQSCTLSWTLFSQLVFPLN*HIQQGY
Trigger: ATAACCCTGCTGAATATGCCAGTTTAATGGAAATAC...CAATTGTGAGAAGAGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS TCA 90 bp GCATGGTGGCCACCGTGGCTGCAAGGCGGCGTGGCAGGCCTTTGCTaGCCTGTCTATATTCCTCAGGCTTGGCCTTCAAGAGCGCCGCAA +
Preference number: 5 (lower is better)
Translates to: AWWPPWLQGGVAGLC*PVYIPQAWPSRAPQ
Trigger: TTGCGGCGCTCTTGAAGGCCAAGCCTGAGGAATATAGACAGGTCAGCAAAGGCCTGCCACGCCGCCTTGCAGCCACGGTGGCCACCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp GATACTGTAGGGAGATGGACCCTTCCTCCATCTTGTATTGCTGGTGGTCTTGGCCCCGCCGCCCCGTCTTaGGGGCCGGCTCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: DTVGRWTLPPSCIAGGLGPAAPS*GPALKA
Trigger: GGCCTTCAGAGCCGGCCCCAAAGACGGGGCGGCGGG...GCCAAGACCACCAGCAATACAAGATGGAGGAAGGGTCCATCTCCCTACAGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS TCA 90 bp GGGCCTGGAGACTTGTTTCCTCCACGGCGTGGTTCACCTCCTGGATaGACAGCTGCAGCTTCATTACCAGGGTGGCTGCGTGACCGTCCG +
Preference number: 5 (lower is better)
Translates to: GPGDLFPPRRGSPPG*TAAASLPGWLRDRP
Trigger: CGGACGGTCACGCAGCCACCCTGGTAATGAAGCTGCAGCTGTTCATCCAGGAGGTGAACCACGCCGTGGAGGAAACAAGTCTCCAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 90 bp GGGTTTGTGTGTGCCACGCGCCAAGCAGGGCATCATAGAGGCCAGTaGGCTGCCGGTCCAGTGGAAGGTCACTCTGACACAGCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: GFVCATRQAGHHRGQ*AAGPVEGHSDTALA
Trigger: GGCAAGAGCTGTGTCAGAGTGACCTTCCACTGGACCGGCAGCTCACTGGCCTCTATGATGCCCTGCTTGGCGCGTGGCACACACAAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 90 bp TGTTTGATGCGCAAGAAGACCGAGTCGAAAGCCAGCTGGTGGGCCTaGTGGTTCAGCCGGGTCAGGGCTGTGCGTGACGCAGACAGTAGG +
Preference number: 5 (lower is better)
Translates to: CLMRKKTESKASWWA*WFSRVRAVRDADSR
Trigger: CCTACTGTCTGCGTCACGCACAGCCCTGACCCGGCTGAACCAGCAGGCCCACCAGCTGGCTTTCGACTCGGTCTTCTTGCGCATCAAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 90 bp TCTGGAGGGTTCGTGATGGCTGCAGGCCCAGTGCGTCCATCACGTTaGTCAGATAGTCGATGTCGGTGGCCAGTTGCTTGGTGGAGTGCG +
Preference number: 5 (lower is better)
Translates to: SGGFVMAAGPVRPSR*SDSRCRWPVAWWSA
Trigger: CGCACTCCACCAAGCAACTGGCCACCGACATCGACTATCTGATCAACGTGATGGACGCACTGGGCCTGCAGCCATCACGAACCCTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS CCA 90 bp TCCTGCTTCAGGGCTTCCACATCACGGAGCACTTTGGGCATGTTCTaGAGGGCCTGGAGACTTGTTTCCTCCACGGCGTGGTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: SCFRASTSRSTLGMF*RAWRLVSSTAWFTS
Trigger: GGAGGTGAACCACGCCGTGGAGGAAACAAGTCTCCAGGCCCTCCAGAACATGCCCAAAGTGCTCCGTGATGTGGAAGCCCTGAAGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 90 bp GGAAAGACGCCTCCTGCTTCAGGGCTTCCACATCACGGAGCACTTTaGGCATGTTCTGGAGGGCCTGGAGACTTGTTTCCTCCACGGCGT +
Preference number: 5 (lower is better)
Translates to: GKTPPASGLPHHGAL*ACSGGPGDLFPPRR
Trigger: ACGCCGTGGAGGAAACAAGTCTCCAGGCCCTCCAGAACATGCCCAAAGTGCTCCGTGATGTGGAAGCCCTGAAGCAGGAGGCGTCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 90 bp GCAGATGCCAAGCCAAAGAGCTTGTGCACAGAGTGGCTCAGCTCCTaGACGCAGTCAATCACTTCCCCGTGTTCCAGAGGCACAGCGCTG +
Preference number: 5 (lower is better)
Translates to: ADAKPKSLCTEWLSS*TQSITSPCSRGTAL
Trigger: CAGCGCTGTGCCTCTGGAACACGGGGAAGTGATTGACTGCGTTCAGGAGCTGAGCCACTCTGTGCACAAGCTCTTTGGCTTGGCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 90 bp CTCAGGCTTGGCCTTCAAGAGCGCCGCAATGTTCTGGAGGGTTCGTaGTGGCTGCAGGCCCAGTGCGTCCATCACGTTGATCAGATAGTC +
Preference number: 5 (lower is better)
Translates to: LRLGLQERRNVLEGS*WLQAQCVHHVDQIV
Trigger: GACTATCTGATCAACGTGATGGACGCACTGGGCCTGCAGCCATCACGAACCCTCCAGAACATTGCGGCGCTCTTGAAGGCCAAGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp GTAGATACTGAGTCTCTAGTCCAGGATGACATCACACTCACAGTAATCCTGTTGCCCGCCGCCCCGTCTTaGGGGCCGGCTCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: VDTESLVQDDITLTVILLPAAPS*GPALKA
Trigger: GGCCTTCAGAGCCGGCCCCAAAGACGGGGCGGCGGG...CAACAGGATTACTGTGAGTGTGATGTCATCCTGGACTAGAGACTCAGTATCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp TACCACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCGATGTCGGTGGCCAGTaGCTTGGTGGAGTGCGGGGT +
Preference number: 5 (lower is better)
Translates to: YHSLYQKTAWGSRFSPSTDVGGQ*LGGVRG
Trigger: ACCCCGCACTCCACCAAGCAACTGGCCACCGACATC...GGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS TCA 90 bp CTGTGTTCCAGCTATCCATCCTGGAAACGAGCAGCAGCTGCTGTTTaGTGCGCAAGAAGACCGAGTCGAAAGCCAGCTGGTGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LCSSYPSWKRAAAAV*CARRPSRKPAGGPA
Trigger: AGCAGGCCCACCAGCTGGCTTTCGACTCGGTCTTCTTGCGCATCAAACAGCAGCTGCTGCTCGTTTCCAGGATGGATAGCTGGAACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 90 bp CTTGGCAGGGCTCTTCTTGTCTGTCAAGATGCTGTCCTGAAAACCTaGCAGGCTCCGAGGGCTGTAGGAGTCAGACAGATACTTCCCCGC +
Preference number: 5 (lower is better)
Translates to: LGRALLVCQDAVLKT*QAPRAVGVRQILPR
Trigger: GCGGGGAAGTATCTGTCTGACTCCTACAGCCCTCGGAGCCTGGCAGGTTTTCAGGACAGCATCTTGACAGACAAGAAGAGCCCTGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 90 bp ATGCCGGCTGTGTTCCAGCTATCCATCCTGGAAACGAGCAGCAGCTaGTGTTTGATGCGCAAGAAGACCGAGTCGAAAGCCAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: MPAVFQLSILETSSS*CLMRKKTESKASWW
Trigger: CCACCAGCTGGCTTTCGACTCGGTCTTCTTGCGCATCAAACAGCAGCTGCTGCTCGTTTCCAGGATGGATAGCTGGAACACAGCCGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 90 bp GTGGACAGGATCCTGTTTGCCAGCTGCTGCTCAAAGTCCCCACACTaGCGCAAGAGCTCTCCACAGGTGGCTATGATCCTGACCGAATTC +
Preference number: 5 (lower is better)
Translates to: VDRILFASCCSKSPH*RKSSPQVAMILTEF
Trigger: GAATTCGGTCAGGATCATAGCCACCTGTGGAGAGCTCTTGCGCCAGTGTGGGGACTTTGAGCAGCAGCTGGCAAACAGGATCCTGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 90 bp TGTCTATATTCCTCAGGCTTGGCCTTCAAGAGCGCCGCAATGTTCTaGAGGGTTCGTGATGGCTGCAGGCCCAGTGCGTCCATCACGTTG +
Preference number: 5 (lower is better)
Translates to: CLYSSGLAFKSAAMF*RVRDGCRPSASITL
Trigger: CAACGTGATGGACGCACTGGGCCTGCAGCCATCACGAACCCTCCAGAACATTGCGGCGCTCTTGAAGGCCAAGCCTGAGGAATATAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS GCA 90 bp ATTCCTGCCATGGGTTCTTGGCAGGGCTCTTCTTGTCTGTCAAGATaGTGTCCTGAAAACCTGCCAGGCTCCGAGGGCTGTAGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: IPAMGSWQGSSCLSR*CPENLPGSEGCRSQ
Trigger: CTGACTCCTACAGCCCTCGGAGCCTGGCAGGTTTTCAGGACAGCATCTTGACAGACAAGAAGAGCCCTGCCAAGAACCCATGGCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGGATGTCGGTGGCCAGTaGCTTGGTGGAGTGCGGGGT +
Preference number: 5 (lower is better)
Translates to: THTHRHTHCPTTENESILDVGGQ*LGGVRG
Trigger: ACCCCGCACTCCACCAAGCAACTGGCCACCGACATC...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS GCA 90 bp CCCCAGGCCATTGGTGAATTTGGCACATCTGTCAACAGCTGCAGATaGCAAGCCAAAGAGCTTGTGCACAGAGTGGCTCAGCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: PQAIGEFGTSVNSCR*QAKELVHRVAQLLN
Trigger: GTTCAGGAGCTGAGCCACTCTGTGCACAAGCTCTTTGGCTTGGCATCTGCAGCTGTTGACAGATGTGCCAAATTCACCAATGGCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 90 bp ACAGGTCCCCAGGCCATTGGTGAATTTGGCACATCTGTCAACAGCTaGAGATGCCAAGCCAAAGAGCTTGTGCACAGAGTGGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: TGPQAIGEFGTSVNS*RCQAKELVHRVAQL
Trigger: GAGCTGAGCCACTCTGTGCACAAGCTCTTTGGCTTGGCATCTGCAGCTGTTGACAGATGTGCCAAATTCACCAATGGCCTGGGGACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp CCCACCACTGAGAATGAATCCATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGCCAAGCCAAAGAGCTaGTGCACAGAGTGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PTTENESILRVTSPVPCPAKPKS*CTEWLS
Trigger: GCTGAGCCACTCTGTGCACAAGCTCTTTGGCTTGGC...AGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS TCA 90 bp GTCTCCTCAATATCAGCACTCAGCGTGCTCCACTTGTCAGCTTCCTaGAGAGATTCCGCAGCAAGCTGCATCCTGGACTTCACCTGGTCA +
Preference number: 5 (lower is better)
Translates to: VSSISALSVLHLSAS*RDSAASCILDFTWS
Trigger: TGACCAGGTGAAGTCCAGGATGCAGCTTGCTGCGGAATCTCTTCAGGAAGCTGACAAGTGGAGCACGCTGAGTGCTGATATTGAGGAGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 90 bp TCCACTTGTCAGCTTCCTGAAGAGATTCCGCAGCAAGCTGCATCCTaGACTTCACCTGGTCAATCTCTACCAGCACCTGCATGGACTGTG +
Preference number: 5 (lower is better)
Translates to: STCQLPEEIPQQAAS*TSPGQSLPAPAWTV
Trigger: CACAGTCCATGCAGGTGCTGGTAGAGATTGACCAGGTGAAGTCCAGGATGCAGCTTGCTGCGGAATCTCTTCAGGAAGCTGACAAGTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp CATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGGACACTCTTCTCACAATTGACATCACGGAGCACTTaGGGCATGTTCTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: HSESHQSCTLSWTLFSQLTSRST*GMFWRA
Trigger: GGCCCTCCAGAACATGCCCAAAGTGCTCCGTGATGT...CAATTGTGAGAAGAGTGTCCAGGACAGGGTACAGGACTGGTGACTCTCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp TATCTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGGCCAAGCCAAAGAGCTaGTGCACAGAGTGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: YLCSSGAFPLPSSCCVIRAKPKS*CTEWLS
Trigger: GCTGAGCCACTCTGTGCACAAGCTCTTTGGCTTGGC...CCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGCGGCGTGGCAGGCCTTaGCTGACCTGTCTATATTCC +
Preference number: 5 (lower is better)
Translates to: THTHRHTHCPTTENESILRRGRP*LTCLYS
Trigger: GGAATATAGACAGGTCAGCAAAGGCCTGCCACGCCG...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp GTAGATACTGAGTCTCTAGTCCAGGATGACATCACACTCACAGTAATCCTGTTGGCCATTTCCAGCCCCTaGGCAAAGTGGGCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: VDTESLVQDDITLTVILLAISSP*AKWAVV
Trigger: CACCACCGCCCACTTTGCCAAGGGGCTGGAAATGGC...CAACAGGATTACTGTGAGTGTGATGTCATCCTGGACTAGAGACTCAGTATCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp TATCTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGCAGGTCCCCAGGCCATaGGTGAATTTGGCACATCTG +
Preference number: 5 (lower is better)
Translates to: YLCSSGAFPLPSSCCVIRQVPRP*VNLAHL
Trigger: CAGATGTGCCAAATTCACCAATGGCCTGGGGACCTG...CCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp ACACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTCCTGCCATGGGTTCTaGGCAGGGCTCTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: THTHTDTHTAPPLRMNPFSCHGF*AGLFLS
Trigger: AGACAAGAAGAGCCCTGCCAAGAACCCATGGCAGGA...GAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp TATCTCTGTTCCTCAGGGGCATTTCCACTTCCCAGTAGCTGCTGTGTGATAAGGTCCTGCCATGGGTTCTaGGCAGGGCTCTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: YLCSSGAFPLPSSCCVIRSCHGF*AGLFLS
Trigger: AGACAAGAAGAGCCCTGCCAAGAACCCATGGCAGGA...CCTTATCACACAGCAGCTACTGGGAAGTGGAAATGCCCCTGAGGAACAGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp TTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTGGAGGGCCTGGAGACTaGTTTCCTCCACGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: LAYVHIPPCLISSSLSLSGGPGD*FPPRRG
Trigger: ACCACGCCGTGGAGGAAACAAGTCTCCAGGCCCTCC...AGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp AGTAACTCCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCGGAGGGCCTGGAGACTaGTTTCCTCCACGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: SNSQVCTLIFKVALESEFGGPGD*FPPRRG
Trigger: ACCACGCCGTGGAGGAAACAAGTCTCCAGGCCCTCC...GAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGAGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp TTTCCAAGTTGCATTCTTTGTCTTGAGGTGGGCACACATGTACCACAGCCTGTAACCTCGTGGGGGTTCTaGAAAACCTGTGTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: FPSCILCLEVGTHVPQPVTSWGF*KTCVAH
Trigger: GTGGGCCACACAGGTTTTCAAGAACCCCCACGAGGT...TACAGGCTGTGGTACATGTGTGCCCACCTCAAGACAAAGAATGCAACTTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp AGTAACTCCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCGCCATTTCCAGCCCCTaGGCAAAGTGGGCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SNSQVCTLIFKVALESEFAISSP*AKWAVV
Trigger: CACCACCGCCCACTTTGCCAAGGGGCTGGAAATGGC...GAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGAGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp CATCACACTCACAGTAATCCTGTTGCCCCTACCTCCCAAGGGATTATAGACATGACAACTTTCACCAGGTaGTGGTCCTGGAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: HHTHSNPVAPTSQGIIDMTTFTR*WSWRWG
Trigger: CCCCCATCTCCAGGACCACAACCTGGTGAAAGTTGT...CATGTCTATAATCCCTTGGGAGGTAGGGGCAACAGGATTACTGTGAGTGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGTTGGCAGGGCTCTTCTaGTCTGTCAAGATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: THTHRHTHCPTTENESILLAGLF*SVKMLS
Trigger: GGACAGCATCTTGACAGACAAGAAGAGCCCTGCCAA...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp TACCACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCCAATTGTCAGCCATGTaGTCCAACTCGGGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: YHSLYQKTAWGSRFSPSTQLSAM*SNSGSS
Trigger: TGAACTTCCCGAGTTGGACAACATGGCTGACAATTG...GGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS GCA 90 bp TCCTCTTTGACAAGAATCATTTGCTCTTTCAGGAAAGACGCCTCCTaGTTCAGGGCTTCCACATCACGGAGCACTTTGGGCATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SSLTRIICSFRKDAS*FRASTSRSTLGMFW
Trigger: CCAGAACATGCCCAAAGTGCTCCGTGATGTGGAAGCCCTGAAGCAGGAGGCGTCTTTCCTGAAAGAGCAAATGATTCTTGTCAAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp ACCACCATGCTTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTACCTCGTGGGGGTTCTaGAAAACCTGTGTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: TTMLGLCTHTTMPNFQFSTSWGF*KTCVAH
Trigger: GTGGGCCACACAGGTTTTCAAGAACCCCCACGAGGT...AGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAAGCATGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp CCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCAGGACAACAACTTTCACCAGGTaGTGGTCCTGGAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: PKFALLSSRLPWKVSSRTTTFTR*WSWRWG
Trigger: CCCCCATCTCCAGGACCACAACCTGGTGAAAGTTGT...TGTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp CCCACCACTGAGAATGAATCCATTCTGAGAGTCACCAGTCCTGTACCCTGTCCTGGAATGTCATCCAGCTaGCACTTCTTTCGAATGGAC +
Preference number: 5 (lower is better)
Translates to: PTTENESILRVTSPVPCPGMSSS*HFFRMD
Trigger: GTCCATTCGAAAGAAGTGCAAGCTGGATGACATTCC...AGGACAGGGTACAGGACTGGTGACTCTCAGAATGGATTCATTCTCAGTGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp ACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCATACGGAATGTCATCCAGCTaGCACTTCTTTCGAATGGAC +
Preference number: 5 (lower is better)
Translates to: TACIRRQLGGVGSLLLPYGMSSS*HFFRMD
Trigger: GTCCATTCGAAAGAAGTGCAAGCTGGATGACATTCC...GTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp CATCACACTCACAGTAATCCTGTTGCCCCTACCTCCCAAGGGATTATAGACATGATGGAGCCCAGCCAATaGTCAGCCATGTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: HHTHSNPVAPTSQGIIDMMEPSQ*SAMLSN
Trigger: GTTGGACAACATGGCTGACAATTGGCTGGGCTCCAT...CATGTCTATAATCCCTTGGGAGGTAGGGGCAACAGGATTACTGTGAGTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp CATCACACTCACAGTAATCCTGTTGCCCCTACCTCCCAAGGGATTATAGACATGGCATGCCGGTCAGCTTaGCAGAAATCACAGCTATGT +
Preference number: 5 (lower is better)
Translates to: HHTHSNPVAPTSQGIIDMACRSA*QKSQLC
Trigger: ACATAGCTGTGATTTCTGCAAAGCTGACCGGCATGC...CATGTCTATAATCCCTTGGGAGGTAGGGGCAACAGGATTACTGTGAGTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGAGGCCATTGGTGAATTaGGCACATCTGTCAACAGCT +
Preference number: 5 (lower is better)
Translates to: THTHRHTHCPTTENESILRPLVN*AHLSTA
Trigger: AGCTGTTGACAGATGTGCCAAATTCACCAATGGCCT...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp GGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCTCTCTCTCTCTCAGGTCCCCAGGCCATaGGTGAATTTGGCACATCTG +
Preference number: 5 (lower is better)
Translates to: GLCTHTTMPNFQFSLSLSQVPRP*VNLAHL
Trigger: CAGATGTGCCAAATTCACCAATGGCCTGGGGACCTG...AGAGAGAGAGAGAGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp TCCCAAGTTTGCACTCTTATCTTCAAGGTTGCCTTGGAAAGTGAGTTCCAGGACTTGGCAGGGCTCTTCTaGTCTGTCAAGATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SQVCTLIFKVALESEFQDLAGLF*SVKMLS
Trigger: GGACAGCATCTTGACAGACAAGAAGAGCCCTGCCAA...GTCCTGGAACTCACTTTCCAAGGCAACCTTGAAGATAAGAGTGCAAACTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp CACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGTCATGGAGCCCAGCCAATaGTCAGCCATGTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: HTGVQNSPASCLSFLHRVMEPSQ*SAMLSN
Trigger: GTTGGACAACATGGCTGACAATTGGCTGGGCTCCAT...GACACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp ACAGCCTGTATCAGAAGACAGCTTGGGGGAGTCGGTTCTCTCCTTCTACCATACAATCACAGCTATGTCTaGAGTTTTGAAGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TACIRRQLGGVGSLLLPYNHSYV*SFEGLL
Trigger: GAGGAGACCTTCAAAACTCAAGACATAGCTGTGATT...GTATGGTAGAAGGAGAGAACCGACTCCCCCAAGCTGTCTTCTGATACAGGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp AGCACTCAGTTCTGCAATGTGAAGTATGTTCACACTGGAGTCCAGAACTCTCCAACAGCTCTTGCCAGGTaGCTAGAAGCTGTACCTTGT +
Preference number: 5 (lower is better)
Translates to: STQFCNVKYVHTGVQNSPTALAR*LEAVPC
Trigger: ACAAGGTACAGCTTCTAGCAACCTGGCAAGAGCTGT...TGGAGAGTTCTGGACTCCAGTGTGAACATACTTCACATTGCAGAACTGAGTGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp CATCACACTCACAGTAATCCTGTTGCCCCTACCTCCCAAGGGATTATAGACATGATCTGTATGAGAAGGTaGTTCTCCTCCATGTCACCG +
Preference number: 5 (lower is better)
Translates to: HHTHSNPVAPTSQGIIDMICMRR*FSSMSP
Trigger: CGGTGACATGGAGGAGAACAACCTTCTCATACAGAT...CATGTCTATAATCCCTTGGGAGGTAGGGGCAACAGGATTACTGTGAGTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS CCA 90 bp CAGGGTTATCTTTCTGGAGGTAATTATATTCCTGCCATGGGTTCTTaGCAGGGCTCTTCTTGTCTGTCAAGATGCTGTCCTGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: QGYLSGGNYIPAMGS*QGSSCLSRCCPENL
Trigger: CAGGTTTTCAGGACAGCATCTTGACAGACAAGAAGAGCCCTGCCAAGAACCCATGGCAGGAATATAATTACCTCCAGAAAGATAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp ACACACACACACAGACACACACACTGCCCCACCACTGAGAATGAATCCATTCTGAATCACAGCTATGTCTaGAGTTTTGAAGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: THTHRHTHCPTTENESILNHSYV*SFEGLL
Trigger: GAGGAGACCTTCAAAACTCAAGACATAGCTGTGATT...CAGAATGGATTCATTCTCAGTGGTGGGGCAGTGTGTGTGTCTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp GTTCACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGCATGCCGGTCAGCTTaGCAGAAATCACAGCTATGT +
Preference number: 5 (lower is better)
Translates to: VHTGVQNSPASCLSFLHRACRSA*QKSQLC
Trigger: ACATAGCTGTGATTTCTGCAAAGCTGACCGGCATGC...ACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp ACCACCATGCTTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTACAGCTCTTGCCAGGTaGCTAGAAGCTGTACCTTGT +
Preference number: 5 (lower is better)
Translates to: TTMLGLCTHTTMPNFQFSTALAR*LEAVPC
Trigger: ACAAGGTACAGCTTCTAGCAACCTGGCAAGAGCTGT...AGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAAGCATGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS-3UTR CAA 90 bp TTACATCGTGTCTTTGGAGACAGGACTGTGTCTTATACCCGTGGCATATCTCTGATCTGTATGAGAAGGTaGTTCTCCTCCATGTCACCG +
Preference number: 5 (lower is better)
Translates to: LHRVFGDRTVSYTRGISLICMRR*FSSMSP
Trigger: CGGTGACATGGAGGAGAACAACCTTCTCATACAGAT...CAGAGATATGCCACGGGTATAAGACACAGTCCTGTCTCCAAAGACACGATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp CACACTGGAGTCCAGAACTCTCCAGCGTCTTGTCTTTCATTTTTACATCGTGTCAGGCCATTGGTGAATTaGGCACATCTGTCAACAGCT +
Preference number: 5 (lower is better)
Translates to: HTGVQNSPASCLSFLHRVRPLVN*AHLSTA
Trigger: AGCTGTTGACAGATGTGCCAAATTCACCAATGGCCT...GACACGATGTAAAAATGAAAGACAAGACGCTGGAGAGTTCTGGACTCCAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS CCA 90 bp ATATTCAGCAGGGTTATCTTTCTGGAGGTAATTATATTCCTGCCATaGGTTCTTGGCAGGGCTCTTCTTGTCTGTCAAGATGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: IFSRVIFLEVIIFLP*VLGRALLVCQDAVL
Trigger: CAGGACAGCATCTTGACAGACAAGAAGAGCCCTGCCAAGAACCCATGGCAGGAATATAATTACCTCCAGAAAGATAACCCTGCTGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS-3UTR CAA 90 bp ACCACCATGCTTGGCTTATGTACACATACCACCATGCCTAATTTCCAGTTCTCTCAATTGTCAGCCATGTaGTCCAACTCGGGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: TTMLGLCTHTTMPNFQFSQLSAM*SNSGSS
Trigger: TGAACTTCCCGAGTTGGACAACATGGCTGACAATTG...AGAGAACTGGAAATTAGGCATGGTGGTATGTGTACATAAGCCAAGCATGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS GCA 90 bp GTGTCCTGCTCAAACTTTTTAATGTCCTCTTTGACAAGAATCATTTaGTCTTTCAGGAAAGACGCCTCCTGCTTCAGGGCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: VSCSNFLMSSLTRII*SFRKDASCFRASTS
Trigger: TGATGTGGAAGCCCTGAAGCAGGAGGCGTCTTTCCTGAAAGAGCAAATGATTCTTGTCAAAGAGGACATTAAAAAGTTTGAGCAGGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 90 bp AGTATCCACAAGCATCATCAAGCTGTTCTGCATGCCGGTCAGCTTTaGAGAAATCACAGCTATGTCTTGAGTTTTGAAGGTCTCCTCAAT +
Preference number: 5 (lower is better)
Translates to: SIHKHHQAVLHAGQL*RNHSYVLSFEGLLN
Trigger: ATTGAGGAGACCTTCAAAACTCAAGACATAGCTGTGATTTCTGCAAAGCTGACCGGCATGCAGAACAGCTTGATGATGCTTGTGGATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp GGTGAGCTCCAGCTCCGGTCCGGCTCTCTCCACACCTaGACTGAGGCACATGGGCAGGGAGGGCACCAAGGC +
Preference number: 6 (lower is better)
Translates to: GELQLRSGSLHT*TEAHGQGGHQG
Trigger: GCCTTGGTGCCCTCCCTGCCCATGTGCCTCAGTGCAGGTGTGGAGAGAGCCGGACCGGAGCTGGAGCTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp CTGGATGAACAGCTGCAGCTTCATTACCAGGGTGGCTaGGTGACCGTCCGCCTTCCCCGCCGCCCCGTCTTT +
Preference number: 6 (lower is better)
Translates to: LDEQLQLHYQGG*VTVRLPRRPVF
Trigger: AAAGACGGGGCGGCGGGGAAGGCGGACGGTCACGCAGCCACCCTGGTAATGAAGCTGCAGCTGTTCATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 90 bp CCACGCATGGTGGCCACCGTGGCTGCAAGGCGGCGTGGCAGGCCTTaGCTGACCTGTCTATATTCCTCAGGCTTGGCCTTCAAGAGCGCC +
Preference number: 6 (lower is better)
Translates to: PRMVATVAARRRGRP*LTCLYSSGLAFKSA
Trigger: GGCGCTCTTGAAGGCCAAGCCTGAGGAATATAGACAGGTCAGCAAAGGCCTGCCACGCCGCCTTGCAGCCACGGTGGCCACCATGCGTGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS TCA 72 bp AGTGGGCGGTGGTGTCGTAAAACTCCAGCAGTCTGGTaGGCTCCAGCTCCGGTCCGGCTCTCTCCACACCTG +
Preference number: 6 (lower is better)
Translates to: SGRWCRKTPAVW*APAPVRLSPHL
Trigger: CAGGTGTGGAGAGAGCCGGACCGGAGCTGGAGCTCACCAGACTGCTGGAGTTTTACGACACCACCGCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp TCCTCAGGCTTGGCCTTCAAGAGCGCCGCAATGTTCTaGAGGGTTCGTGATGGCTGCAGGCCCAGTGCGTCC +
Preference number: 6 (lower is better)
Translates to: SSGLAFKSAAMF*RVRDGCRPSAS
Trigger: GGACGCACTGGGCCTGCAGCCATCACGAACCCTCCAGAACATTGCGGCGCTCTTGAAGGCCAAGCCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS CCA 72 bp ACCACGCATGGTGGCCACCGTGGCTGCAAGGCGGCGTaGCAGGCCTTTGCTGACCTGTCTATATTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: TTHGGHRGCKAA*QAFADLSIFLR
Trigger: CCTGAGGAATATAGACAGGTCAGCAAAGGCCTGCCACGCCGCCTTGCAGCCACGGTGGCCACCATGCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS TCA 72 bp TGTGCCACGCGCCAAGCAGGGCATCATAGAGGCCAGTaGGCTGCCGGTCCAGTGGAAGGTCACTCTGACACA +
Preference number: 6 (lower is better)
Translates to: CATRQAGHHRGQ*AAGPVEGHSDT
Trigger: TGTGTCAGAGTGACCTTCCACTGGACCGGCAGCTCACTGGCCTCTATGATGCCCTGCTTGGCGCGTGGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 72 bp GGCCTTCAAGAGCGCCGCAATGTTCTGGAGGGTTCGTaGTGGCTGCAGGCCCAGTGCGTCCATCACGTTGAT +
Preference number: 6 (lower is better)
Translates to: GLQERRNVLEGS*WLQAQCVHHVD
Trigger: ATCAACGTGATGGACGCACTGGGCCTGCAGCCATCACGAACCCTCCAGAACATTGCGGCGCTCTTGAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS TCA 72 bp CCACCGTGGCTGCAAGGCGGCGTGGCAGGCCTTTGCTaGCCTGTCTATATTCCTCAGGCTTGGCCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: PPWLQGGVAGLC*PVYIPQAWPSR
Trigger: TCTTGAAGGCCAAGCCTGAGGAATATAGACAGGTCAGCAAAGGCCTGCCACGCCGCCTTGCAGCCACGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS GCA 72 bp TTCCCCGCTGTGGACAGGATCCTGTTTGCCAGCTGCTaGTCAAAGTCCCCACACTGGCGCAAGAGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: FPAVDRILFASC*SKSPHWRKSSP
Trigger: TGGAGAGCTCTTGCGCCAGTGTGGGGACTTTGAGCAGCAGCTGGCAAACAGGATCCTGTCCACAGCGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp TCAATAATTCACACCACGCATGGTGGCCACCGTGGCTaGAAGGCGGCGTGGCAGGCCTTTGCTGACCTGTCT +
Preference number: 6 (lower is better)
Translates to: SIIHTTHGGHRG*KAAWQAFADLS
Trigger: AGACAGGTCAGCAAAGGCCTGCCACGCCGCCTTGCAGCCACGGTGGCCACCATGCGTGGTGTGAATTATTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS CCA 72 bp AGGGCTTCCACATCACGGAGCACTTTGGGCATGTTCTaGAGGGCCTGGAGACTTGTTTCCTCCACGGCGTGG +
Preference number: 6 (lower is better)
Translates to: RASTSRSTLGMF*RAWRLVSSTAW
Trigger: CCACGCCGTGGAGGAAACAAGTCTCCAGGCCCTCCAGAACATGCCCAAAGTGCTCCGTGATGTGGAAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp CAGGGCATCATAGAGGCCAGTGAGCTGCCGGTCCAGTaGAAGGTCACTCTGACACAGCTCTTGCCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: QGIIEASELPVQ*KVTLTQLLPGC
Trigger: GCAACCTGGCAAGAGCTGTGTCAGAGTGACCTTCCACTGGACCGGCAGCTCACTGGCCTCTATGATGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp ACCTCGTGGGGGTTCTTGAAAACCTGTGTGGCCCACTaGGTTTGTGTGTGCCACGCGCCAAGCAGGGCATCA +
Preference number: 6 (lower is better)
Translates to: TSWGFLKTCVAH*VCVCHAPSRAS
Trigger: TGATGCCCTGCTTGGCGCGTGGCACACACAAACCCAGTGGGCCACACAGGTTTTCAAGAACCCCCACGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp AACAGAAACCTTGTCCGATGTCGGTGGCCAGTTGCTTaGTGGAGTGCGGGGTCACCTCCGGGATCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: NRNLVRCRWPVA*WSAGSPPGSGG
Trigger: TCCTCCAGATCCCGGAGGTGACCCCGCACTCCACCAAGCAACTGGCCACCGACATCGGACAAGGTTTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205438.2
CDS CAA 90 bp AGGAAAGACGCCTCCTGCTTCAGGGCTTCCACATCACGGAGCACTTaGGGCATGTTCTGGAGGGCCTGGAGACTTGTTTCCTCCACGGCG +
Preference number: 6 (lower is better)
Translates to: RKDASCFRASTSRST*GMFWRAWRLVSSTA
Trigger: CGCCGTGGAGGAAACAAGTCTCCAGGCCCTCCAGAACATGCCCAAAGTGCTCCGTGATGTGGAAGCCCTGAAGCAGGAGGCGTCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 90 bp CAGTGCGTCCATCACGTTGATCAGATAGTCGATGTCGGTGGCCAGTaGCTTGGTGGAGTGCGGGGTCACCTCCGGGATCTGGAGGATCAC +
Preference number: 6 (lower is better)
Translates to: QCVHHVDQIVDVGGQ*LGGVRGHLRDLEDH
Trigger: GTGATCCTCCAGATCCCGGAGGTGACCCCGCACTCCACCAAGCAACTGGCCACCGACATCGACTATCTGATCAACGTGATGGACGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS CAA 90 bp AGGCGGCGTGGCAGGCCTTTGCTGACCTGTCTATATTCCTCAGGCTaGGCCTTCAAGAGCGCCGCAATGTTCTGGAGGGTTCGTGATGGC +
Preference number: 6 (lower is better)
Translates to: RRRGRPLLTCLYSSG*AFKSAAMFWRVRDG
Trigger: GCCATCACGAACCCTCCAGAACATTGCGGCGCTCTTGAAGGCCAAGCCTGAGGAATATAGACAGGTCAGCAAAGGCCTGCCACGCCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS CAA 90 bp GCTGTGTTCCAGCTATCCATCCTGGAAACGAGCAGCAGCTGCTGTTaGATGCGCAAGAAGACCGAGTCGAAAGCCAGCTGGTGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: AVFQLSILETSSSCC*MRKKTESKASWWAC
Trigger: GCAGGCCCACCAGCTGGCTTTCGACTCGGTCTTCTTGCGCATCAAACAGCAGCTGCTGCTCGTTTCCAGGATGGATAGCTGGAACACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 72 bp AGGCCAGTGAGCTGCCGGTCCAGTGGAAGGTCACTCTaGCACAGCTCTTGCCAGGTTGCTAGAAGCTGTACC +
Preference number: 6 (lower is better)
Translates to: RPVSCRSSGRSL*HSSCQVARSCT
Trigger: GGTACAGCTTCTAGCAACCTGGCAAGAGCTGTGTCAGAGTGACCTTCCACTGGACCGGCAGCTCACTGGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp TACTTCCCCGCTGTGGACAGGATCCTGTTTGCCAGCTaGTGCTCAAAGTCCCCACACTGGCGCAAGAGCTCT +
Preference number: 6 (lower is better)
Translates to: YFPAVDRILFAS*CSKSPHWRKSS
Trigger: AGAGCTCTTGCGCCAGTGTGGGGACTTTGAGCAGCAGCTGGCAAACAGGATCCTGTCCACAGCGGGGAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp ACAGCATCCACCAGCTCCACAACTTTCACCAGGTTGTaGTCCTGGAGATGGGGGAGCAGCGCCATTTCCAGC +
Preference number: 6 (lower is better)
Translates to: TASTSSTTFTRL*SWRWGSSAISS
Trigger: GCTGGAAATGGCGCTGCTCCCCCATCTCCAGGACCACAACCTGGTGAAAGTTGTGGAGCTGGTGGATGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp GCCTCCTGCTTCAGGGCTTCCACATCACGGAGCACTTaGGGCATGTTCTGGAGGGCCTGGAGACTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: ASCFRASTSRST*GMFWRAWRLVS
Trigger: GGAAACAAGTCTCCAGGCCCTCCAGAACATGCCCAAAGTGCTCCGTGATGTGGAAGCCCTGAAGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp GTGGGGGTTCTTGAAAACCTGTGTGGCCCACTGGGTTaGTGTGTGCCACGCGCCAAGCAGGGCATCATAGAG +
Preference number: 6 (lower is better)
Translates to: VGVLENLCGPLG*CVPRAKQGIIE
Trigger: CTCTATGATGCCCTGCTTGGCGCGTGGCACACACAAACCCAGTGGGCCACACAGGTTTTCAAGAACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp CATCACGTTGATCAGATAGTCGATGTCGGTGGCCAGTaGCTTGGTGGAGTGCGGGGTCACCTCCGGGATCTG +
Preference number: 6 (lower is better)
Translates to: HHVDQIVDVGGQ*LGGVRGHLRDL
Trigger: CAGATCCCGGAGGTGACCCCGCACTCCACCAAGCAACTGGCCACCGACATCGACTATCTGATCAACGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS TCA 72 bp GACTTGTTTCCTCCACGGCGTGGTTCACCTCCTGGATaGACAGCTGCAGCTTCATTACCAGGGTGGCTGCGT +
Preference number: 6 (lower is better)
Translates to: DLFPPRRGSPPG*TAAASLPGWLR
Trigger: ACGCAGCCACCCTGGTAATGAAGCTGCAGCTGTTCATCCAGGAGGTGAACCACGCCGTGGAGGAAACAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 72 bp GGGCTGTCAGCAGTCCACAGGTCCCCAGGCCATTGGTaGATTTGGCACATCTGTCAACAGCTGCAGATGCCA +
Preference number: 6 (lower is better)
Translates to: GLSAVHRSPGHW*IWHICQQLQMP
Trigger: TGGCATCTGCAGCTGTTGACAGATGTGCCAAATTCACCAATGGCCTGGGGACCTGTGGACTGCTGACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 72 bp TTCGTGATGGCTGCAGGCCCAGTGCGTCCATCACGTTaGTCAGATAGTCGATGTCGGTGGCCAGTTGCTTGG +
Preference number: 6 (lower is better)
Translates to: FVMAAGPVRPSR*SDSRCRWPVAW
Trigger: CCAAGCAACTGGCCACCGACATCGACTATCTGATCAACGTGATGGACGCACTGGGCCTGCAGCCATCACGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS GCA 72 bp CACTTTAGACTGATCCACAGACTGAGAGGTGAACGATaGTACGATCTGGGGGCTGGCCAGGGCCTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: HFRLIHRLRGER*YDLGAGQGLQS
Trigger: AGACTGGAGGCCCTGGCCAGCCCCCAGATCGTAGCATCGTTCACCTCTCAGTCTGTGGATCAGTCTAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp CCTCCTGCTTCAGGGCTTCCACATCACGGAGCACTTTaGGCATGTTCTGGAGGGCCTGGAGACTTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: PPASGLPHHGAL*ACSGGPGDLFP
Trigger: AGGAAACAAGTCTCCAGGCCCTCCAGAACATGCCCAAAGTGCTCCGTGATGTGGAAGCCCTGAAGCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp ATCCTGTTTGCCAGCTGCTGCTCAAAGTCCCCACACTaGCGCAAGAGCTCTCCACAGGTGGCTATGATCCTG +
Preference number: 6 (lower is better)
Translates to: ILFASCCSKSPH*RKSSPQVAMIL
Trigger: CAGGATCATAGCCACCTGTGGAGAGCTCTTGCGCCAGTGTGGGGACTTTGAGCAGCAGCTGGCAAACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp TACACAGCATCCACCAGCTCCACAACTTTCACCAGGTaGTGGTCCTGGAGATGGGGGAGCAGCGCCATTTCC +
Preference number: 6 (lower is better)
Translates to: YTASTSSTTFTR*WSWRWGSSAIS
Trigger: GGAAATGGCGCTGCTCCCCCATCTCCAGGACCACAACCTGGTGAAAGTTGTGGAGCTGGTGGATGCTGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 90 bp TGCATAGTGGCTCTGGCAATGGAGCCCAGCCAATTGTCAGCCATGTaGTCCAACTCGGGAAGTTCATCCCCTTGCTCAGGAGGGAATGGC +
Preference number: 6 (lower is better)
Translates to: CIVALAMEPSQLSAM*SNSGSSSPCSGGNG
Trigger: GCCATTCCCTCCTGAGCAAGGGGATGAACTTCCCGAGTTGGACAACATGGCTGACAATTGGCTGGGCTCCATTGCCAGAGCCACTATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp ATGGGTTCTTGGCAGGGCTCTTCTTGTCTGTCAAGATaGTGTCCTGAAAACCTGCCAGGCTCCGAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: MGSWQGSSCLSR*CPENLPGSEGC
Trigger: ACAGCCCTCGGAGCCTGGCAGGTTTTCAGGACAGCATCTTGACAGACAAGAAGAGCCCTGCCAAGAACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp TGGAGACTTGTTTCCTCCACGGCGTGGTTCACCTCCTaGATGAACAGCTGCAGCTTCATTACCAGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: WRLVSSTAWFTS*MNSCSFITRVA
Trigger: AGCCACCCTGGTAATGAAGCTGCAGCTGTTCATCCAGGAGGTGAACCACGCCGTGGAGGAAACAAGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp TTCTGGAGGGCCTGGAGACTTGTTTCCTCCACGGCGTaGTTCACCTCCTGGATGAACAGCTGCAGCTTCATT +
Preference number: 6 (lower is better)
Translates to: FWRAWRLVSSTA*FTSWMNSCSFI
Trigger: AATGAAGCTGCAGCTGTTCATCCAGGAGGTGAACCACGCCGTGGAGGAAACAAGTCTCCAGGCCCTCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp GAGGGCTGTAGGAGTCAGACAGATACTTCCCCGCTGTaGACAGGATCCTGTTTGCCAGCTGCTGCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: EGCRSQTDTSPL*TGSCLPAAAQS
Trigger: ACTTTGAGCAGCAGCTGGCAAACAGGATCCTGTCCACAGCGGGGAAGTATCTGTCTGACTCCTACAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp GTCAGCAGTCCACAGGTCCCCAGGCCATTGGTGAATTaGGCACATCTGTCAACAGCTGCAGATGCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: VSSPQVPRPLVN*AHLSTAADAKP
Trigger: TGGCTTGGCATCTGCAGCTGTTGACAGATGTGCCAAATTCACCAATGGCCTGGGGACCTGTGGACTGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp CAGCTATCCATCCTGGAAACGAGCAGCAGCTGCTGTTaGATGCGCAAGAAGACCGAGTCGAAAGCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: QLSILETSSSCC*MRKKTESKASW
Trigger: CCAGCTGGCTTTCGACTCGGTCTTCTTGCGCATCAAACAGCAGCTGCTGCTCGTTTCCAGGATGGATAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp GCTCTGGCAATGGAGCCCAGCCAATTGTCAGCCATGTaGTCCAACTCGGGAAGTTCATCCCCTTGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: ALAMEPSQLSAM*SNSGSSSPCSG
Trigger: TCCTGAGCAAGGGGATGAACTTCCCGAGTTGGACAACATGGCTGACAATTGGCTGGGCTCCATTGCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp GGCAGGCCTTTGCTGACCTGTCTATATTCCTCAGGCTaGGCCTTCAAGAGCGCCGCAATGTTCTGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: GRPLLTCLYSSG*AFKSAAMFWRV
Trigger: AACCCTCCAGAACATTGCGGCGCTCTTGAAGGCCAAGCCTGAGGAATATAGACAGGTCAGCAAAGGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057576.8
CDS CAA 90 bp AAGAGGGATTTCAGGGCTGTCAGCAGTCCACAGGTCCCCAGGCCATaGGTGAATTTGGCACATCTGTCAACAGCTGCAGATGCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: KRDFRAVSSPQVPRP*VNLAHLSTAADAKP
Trigger: TGGCTTGGCATCTGCAGCTGTTGACAGATGTGCCAAATTCACCAATGGCCTGGGGACCTGTGGACTGCTGACAGCCCTGAAATCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 72 bp AGCTATCCATCCTGGAAACGAGCAGCAGCTGCTGTTTaGTGCGCAAGAAGACCGAGTCGAAAGCCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: SYPSWKRAAAAV*CARRPSRKPAG
Trigger: ACCAGCTGGCTTTCGACTCGGTCTTCTTGCGCATCAAACAGCAGCTGCTGCTCGTTTCCAGGATGGATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp GTGTTCCAGCTATCCATCCTGGAAACGAGCAGCAGCTaGTGTTTGATGCGCAAGAAGACCGAGTCGAAAGCC +
Preference number: 6 (lower is better)
Translates to: VFQLSILETSSS*CLMRKKTESKA
Trigger: GGCTTTCGACTCGGTCTTCTTGCGCATCAAACAGCAGCTGCTGCTCGTTTCCAGGATGGATAGCTGGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp AGAGATTCCGCAGCAAGCTGCATCCTGGACTTCACCTaGTCAATCTCTACCAGCACCTGCATGGACTGTGAC +
Preference number: 6 (lower is better)
Translates to: RDSAASCILDFT*SISTSTCMDCD
Trigger: GTCACAGTCCATGCAGGTGCTGGTAGAGATTGACCAGGTGAAGTCCAGGATGCAGCTTGCTGCGGAATCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp GTCTGCATAGTGGCTCTGGCAATGGAGCCCAGCCAATaGTCAGCCATGTTGTCCAACTCGGGAAGTTCATCC +
Preference number: 6 (lower is better)
Translates to: VCIVALAMEPSQ*SAMLSNSGSSS
Trigger: GGATGAACTTCCCGAGTTGGACAACATGGCTGACAATTGGCTGGGCTCCATTGCCAGAGCCACTATGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 72 bp ATATCAGCACTCAGCGTGCTCCACTTGTCAGCTTCCTaGAGAGATTCCGCAGCAAGCTGCATCCTGGACTTC +
Preference number: 6 (lower is better)
Translates to: ISALSVLHLSAS*RDSAASCILDF
Trigger: GAAGTCCAGGATGCAGCTTGCTGCGGAATCTCTTCAGGAAGCTGACAAGTGGAGCACGCTGAGTGCTGATAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 72 bp CCAGCATGCAAGGCCAACTCTAATGCAGAGTCCTCTTaGGTCACAAATGGCTCAAGATTCAGGGGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: PACKANSNAESS*VTNGSRFRGRD
Trigger: GTCCCTGCCCCTGAATCTTGAGCCATTTGTGACTCAAGAGGACTCTGCATTAGAGTTGGCCTTGCATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp GCTCTTCTTGTCTGTCAAGATGCTGTCCTGAAAACCTaGCAGGCTCCGAGGGCTGTAGGAGTCAGACAGATA +
Preference number: 6 (lower is better)
Translates to: ALLVCQDAVLKT*QAPRAVGVRQI
Trigger: TATCTGTCTGACTCCTACAGCCCTCGGAGCCTGGCAGGTTTTCAGGACAGCATCTTGACAGACAAGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp ACAAGAATCATTTGCTCTTTCAGGAAAGACGCCTCCTaGTTCAGGGCTTCCACATCACGGAGCACTTTGGGC +
Preference number: 6 (lower is better)
Translates to: TRIICSFRKDAS*FRASTSRSTLG
Trigger: GCCCAAAGTGCTCCGTGATGTGGAAGCCCTGAAGCAGGAGGCGTCTTTCCTGAAAGAGCAAATGATTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp TGTTCCAGAGGCACAGCGCTGATCTGTATGAGAAGGTaGTTCTCCTCCATGTCACCGTACTTCAGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: CSRGTALICMRR*FSSMSPYFSWK
Trigger: CTTCCAGCTGAAGTACGGTGACATGGAGGAGAACAACCTTCTCATACAGATCAGCGCTGTGCCTCTGGAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp ATTGGTGAATTTGGCACATCTGTCAACAGCTGCAGATaGCAAGCCAAAGAGCTTGTGCACAGAGTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: IGEFGTSVNSCR*QAKELVHRVAQ
Trigger: CTGAGCCACTCTGTGCACAAGCTCTTTGGCTTGGCATCTGCAGCTGTTGACAGATGTGCCAAATTCACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 72 bp CCAGTGGAAGGTCACTCTGACACAGCTCTTGCCAGGTaGCTAGAAGCTGTACCTTGTGACACTTGTAGTAGT +
Preference number: 6 (lower is better)
Translates to: PVEGHSDTALAR*LEAVPCDTCSS
Trigger: ACTACTACAAGTGTCACAAGGTACAGCTTCTAGCAACCTGGCAAGAGCTGTGTCAGAGTGACCTTCCACTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp ATCCTGGACTTCACCTGGTCAATCTCTACCAGCACCTaGATGGACTGTGACGTGTCCTGCTCAAACTTTTTA +
Preference number: 6 (lower is better)
Translates to: ILDFTWSISTST*MDCDVSCSNFL
Trigger: TAAAAAGTTTGAGCAGGACACGTCACAGTCCATGCAGGTGCTGGTAGAGATTGACCAGGTGAAGTCCAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp TCTGAAAAGCGGTCCAGTCTTCCTGAAACAGGGAGTTaGGAGGAATGTCATCCAGCTTGCACTTCTTTCGAA +
Preference number: 6 (lower is better)
Translates to: SEKRSSLPETGS*EECHPACTSFE
Trigger: TTCGAAAGAAGTGCAAGCTGGATGACATTCCTCCCAACTCCCTGTTTCAGGAAGACTGGACCGCTTTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 72 bp CACCTGGTCAATCTCTACCAGCACCTGCATGGACTGTaGCGTGTCCTGCTCAAACTTTTTAATGTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: HLVNLYQHLHGL*RVLLKLFNVLF
Trigger: AAAGAGGACATTAAAAAGTTTGAGCAGGACACGTCACAGTCCATGCAGGTGCTGGTAGAGATTGACCAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS TCA 72 bp GCTTGCACTTCTTTCGAATGGACTGGAGAGCGTTGGTaGAGTGAGACACATACTTGGCAAAGAGGGATTTCA +
Preference number: 6 (lower is better)
Translates to: ACTSFEWTGERW*SETHTWQRGIS
Trigger: TGAAATCCCTCTTTGCCAAGTATGTGTCTCACTTCACCAACGCTCTCCAGTCCATTCGAAAGAAGTGCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp CTTTCTGGAGGTAATTATATTCCTGCCATGGGTTCTTaGCAGGGCTCTTCTTGTCTGTCAAGATGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: LSGGNYIPAMGS*QGSSCLSRCCP
Trigger: AGGACAGCATCTTGACAGACAAGAAGAGCCCTGCCAAGAACCCATGGCAGGAATATAATTACCTCCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 90 bp CGTGTCCTGCTCAAACTTTTTAATGTCCTCTTTGACAAGAATCATTaGCTCTTTCAGGAAAGACGCCTCCTGCTTCAGGGCTTCCACATC +
Preference number: 6 (lower is better)
Translates to: RVLLKLFNVLFDKNH*LFQERRLLLQGFHI
Trigger: GATGTGGAAGCCCTGAAGCAGGAGGCGTCTTTCCTGAAAGAGCAAATGATTCTTGTCAAAGAGGACATTAAAAAGTTTGAGCAGGACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CAA 90 bp TGCATGGACTGTGACGTGTCCTGCTCAAACTTTTTAATGTCCTCTTaGACAAGAATCATTTGCTCTTTCAGGAAAGACGCCTCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: CMDCDVSCSNFLMSS*TRIICSFRKDASCF
Trigger: GAAGCAGGAGGCGTCTTTCCTGAAAGAGCAAATGATTCTTGTCAAAGAGGACATTAAAAAGTTTGAGCAGGACACGTCACAGTCCATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS GCA 72 bp AAGCATCATCAAGCTGTTCTGCATGCCGGTCAGCTTTaGAGAAATCACAGCTATGTCTTGAGTTTTGAAGGT +
Preference number: 6 (lower is better)
Translates to: KHHQAVLHAGQL*RNHSYVLSFEG
Trigger: ACCTTCAAAACTCAAGACATAGCTGTGATTTCTGCAAAGCTGACCGGCATGCAGAACAGCTTGATGATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2
CDS CCA 72 bp AGGGTTATCTTTCTGGAGGTAATTATATTCCTGCCATaGGTTCTTGGCAGGGCTCTTCTTGTCTGTCAAGAT +
Preference number: 6 (lower is better)
Translates to: RVIFLEVIIFLP*VLGRALLVCQD
Trigger: ATCTTGACAGACAAGAAGAGCCCTGCCAAGAACCCATGGCAGGAATATAATTACCTCCAGAAAGATAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057576.8
ENSMUST00000205438.2