RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COG6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027742

Ensembl transcript IDs: ENSMUST00000036665.10, ENSMUST00000193432.6, ENSMUST00000195183.2

Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGATGGGGTTGGAGGAAACAGACTGAGTGCACAATGTATGGCGATTaGCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGC +
Preference number: 1 (lower is better)
Translates to: GWGWRKQTECTMYGD*PSWNRLKLSAQEAC
Trigger: GCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTGCACTCAGTCTGTTTCCTCCAACCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR GCA 90 bp CACAATGTATGGCGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTaGACAGGAAGCCTGCTGAAGGGTCTTTCCCTCTCTTCCGACCTA +
Preference number: 1 (lower is better)
Translates to: HNVWRLPVLEQAEAV*TGSLLKGLSLSSDL
Trigger: TAGGTCGGAAGAGAGGGAAAGACCCTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR CCA 90 bp AGTTGCTTCTGCTCTGAGTGCAAGACAGAGTTTCTAGGATGGGGTTaGAGGAAACAGACTGAGTGCACAATGTATGGCGATTGCCCGTCC +
Preference number: 1 (lower is better)
Translates to: SCFCSECKTEFLGWG*RKQTECTMYGDCPS
Trigger: GGACGGGCAATCGCCATACATTGTGCACTCAGTCTGTTTCCTCCAACCCCATCCTAGAAACTCTGTCTTGCACTCAGAGCAGAAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR CCA 90 bp TTCACGTTTCCTGTTCCTAAGCAGTCCTGGGTGTTCCTACAGTTCTaGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTC +
Preference number: 1 (lower is better)
Translates to: FTFPVPKQSWVFLQF*MDSCLHVRRSQSSF
Trigger: GAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTTAGGAACAGGAAACGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
3UTR CCA 90 bp CAGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTaGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATTAGA +
Preference number: 1 (lower is better)
Translates to: QPECFSPHQTHQHLF*DQKHGLGSRSYSIR
Trigger: TCTAATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR-3UTR TCA 90 bp ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTACGTCCTGGAACAGGCTaGAGCTGTCTGCACAGGAAG +
Preference number: 2 (lower is better)
Translates to: TTAPHPSGICLLCCTSFLRPGTG*SCLHRK
Trigger: CTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACG...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR-3UTR GCA 90 bp CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAACACCCTTGGTGTCATTaGCAGGCAGCAATTATCTGC +
Preference number: 2 (lower is better)
Translates to: QLEESSGTFHKRTLIANKHPWCH*QAAIIC
Trigger: GCAGATAATTGCTGCCTGGCAATGACACCAAGGGTG...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR-3UTR TCA 90 bp CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCACCCGAAACTCCCAGCTaGCTTTATGCCTCTATTTAT +
Preference number: 2 (lower is better)
Translates to: PHQTHQHLFWDQKHGLGSPETPS*LYASIY
Trigger: ATAAATAGAGGCATAAAGTCAGCTGGGAGTTTCGGG...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR-3UTR CCA 90 bp CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCATTGCCAATAAAGCTGTaGTTTAGATGTTACACAGAA +
Preference number: 2 (lower is better)
Translates to: PHQTHQHLFWDQKHGLGSLPIKL*FRCYTE
Trigger: TTCTGTGTAACATCTAAACCACAGCTTTATTGGCAA...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR-3UTR CCA 90 bp CGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAACGCATCAACACCTATTTTaGGATCAGAAACATGGGCTA +
Preference number: 2 (lower is better)
Translates to: RDLSPLLYFLSISILSKTHQHLF*DQKHGL
Trigger: TAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATG...CGTTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR-3UTR GCA 90 bp AGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAAAAATACATACAAACCTaGACCAGGCATGAAAGTAAG +
Preference number: 2 (lower is better)
Translates to: SGICLLCCTSFLSVFFPKKYIQT*TRHESK
Trigger: CTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTT...TTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR GCA 72 bp TGGCGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTaGACAGGAAGCCTGCTGAAGGGTCTTTCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: WRLPVLEQAEAV*TGSLLKGLSLS
Trigger: AGAGAGGGAAAGACCCTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR TCA 72 bp GCACAATGTATGGCGATTGCCCGTCCTGGAACAGGCTaGAGCTGTCTGCACAGGAAGCCTGCTGAAGGGTCT +
Preference number: 3 (lower is better)
Translates to: AQCMAIARPGTG*SCLHRKPAEGS
Trigger: AGACCCTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR CCA 72 bp CAGACTGAGTGCACAATGTATGGCGATTGCCCGTCCTaGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGC +
Preference number: 3 (lower is better)
Translates to: QTECTMYGDCPS*NRLKLSAQEAC
Trigger: GCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTGCACTCAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR TCA 72 bp TGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTaGAGGGTCTTTCCCTCTCTTCCGACCTATCAGCTA +
Preference number: 3 (lower is better)
Translates to: WNRLKLSAQEAC*RVFPSLPTYQL
Trigger: TAGCTGATAGGTCGGAAGAGAGGGAAAGACCCTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR GCA 72 bp TGGAGGAAACAGACTGAGTGCACAATGTATGGCGATTaGCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAG +
Preference number: 3 (lower is better)
Translates to: WRKQTECTMYGD*PSWNRLKLSAQ
Trigger: CTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTGCACTCAGTCTGTTTCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR CCA 72 bp CCTGTTCCTAAGCAGTCCTGGGTGTTCCTACAGTTCTaGATGGACTCATGTCTTCATGTACGACGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: PVPKQSWVFLQF*MDSCLHVRRSQ
Trigger: CTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTTAGGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
3UTR TCA 72 bp GACAGAGTTTCTAGGATGGGGTTGGAGGAAACAGACTaGGTGCACAATGTATGGCGATTGCCCGTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: DRVSRMGLEETD*VHNVWRLPVLE
Trigger: TTCCAGGACGGGCAATCGCCATACATTGTGCACTCAGTCTGTTTCCTCCAACCCCATCCTAGAAACTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR CCA 72 bp TGCTTCTGCTCTGAGTGCAAGACAGAGTTTCTAGGATaGGGTTGGAGGAAACAGACTGAGTGCACAATGTAT +
Preference number: 3 (lower is better)
Translates to: CFCSECKTEFLG*GWRKQTECTMY
Trigger: ATACATTGTGCACTCAGTCTGTTTCCTCCAACCCCATCCTAGAAACTCTGTCTTGCACTCAGAGCAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR CCA 72 bp CCTTCCATAAGCGGACGCTCATTGCCAATAAAGCTGTaGTTTAGATGTTACACAGAACTTACAAGTCATCGT +
Preference number: 3 (lower is better)
Translates to: PSISGRSLPIKL*FRCYTELTSHR
Trigger: ACGATGACTTGTAAGTTCTGTGTAACATCTAAACCACAGCTTTATTGGCAATGAGCGTCCGCTTATGGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR-3UTR CAA 90 bp TATGCTGTTTTGATAAATACACCATATAAATTCATTGAACTGACCAACCCGGCACCACCCTTGGTGTCATaGCCAGGCAGCAATTATCTG +
Preference number: 3 (lower is better)
Translates to: YAVLINTPYKFIELTNPAPPLVS*PGSNYL
Trigger: CAGATAATTGCTGCCTGGCAATGACACCAAGGGTGG...TGCCGGGTTGGTCAGTTCAATGAATTTATATGGTGTATTTATCAAAACAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR-3UTR CAA 90 bp CTATTTAAATACATACAAACCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAATGGGCAAGAGAACATaGCTCCCTACAGATTCAAGT +
Preference number: 3 (lower is better)
Translates to: LFKYIQTCTRHESKQEGTMGKRT*LPTDSS
Trigger: ACTTGAATCTGTAGGGAGCAATGTTCTCTTGCCCAT...TGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR-3UTR CAA 90 bp AGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAACCATCAACACCTATTTaGGGATCAGAAACATGGGCT +
Preference number: 3 (lower is better)
Translates to: SGICLLCCTSFLSVFFPKPSTPI*GSETWA
Trigger: AGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGG...TTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR TCA 72 bp TTACAAGTCATCGTACTTAATCCCGAAACTCCCAGCTaGCTTTATGCCTCTATTTATAATCCCAAATCACGG +
Preference number: 3 (lower is better)
Translates to: LQVIVLNPETPS*LYASIYNPKSR
Trigger: CCGTGATTTGGGATTATAAATAGAGGCATAAAGTCAGCTGGGAGTTTCGGGATTAAGTACGATGACTTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR GCA 72 bp CTATCAGCTAAGTGTCTATTTAAATACATACAAACCTaGACCAGGCATGAAAGTAAGCAGGAAGGGACAACA +
Preference number: 3 (lower is better)
Translates to: LSAKCLFKYIQT*TRHESKQEGTT
Trigger: TGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAGACACTTAGCTGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR TCA 72 bp AAGAGAACATTGCTCCCTACAGATTCAAGTCAATATTaGTTTACCTCCATGTTAGCTGAGAATGAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: KRTLLPTDSSQY*FTSMLAENERN
Trigger: ATTTCTTTCATTCTCAGCTAACATGGAGGTAAATCAATATTGACTTGAATCTGTAGGGAGCAATGTTCTCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGAGCGGATTGTTGGGCTaGGCGGGGGTCGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RLPVLEQAEAVCTGSLLKSGLLG*AGVAPA
Trigger: GGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCT...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGCCTAGGTGTACCTCCTaGCCCTCCTCTTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: RLPVLEQAEAVCTGSLLKPRCTS*PSSCKS
Trigger: GCTCTTACAAGAGGAGGGCCAGGAGGTACACCTAGG...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCGAGGTGGTCTGGGGCTaGGAGGTAGCGGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: AIQLEESSGTFHKRTLIAEVVWG*EVAVKL
Trigger: CAGTTTGACCGCTACCTCTCAGCCCCAGACCACCTC...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp CTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAAAGACAGGCCTGTCCTaGAGGGCTTCCATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGVPTVLDGLMSSCTTLPKTGLS*RASMAW
Trigger: CCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTT...TGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTAAGCAAAGTGAGGGTCTaGCTCAGGGCAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TTAPHPSGICLLCCTSFLSKVRV*LRAELG
Trigger: ACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTGCT...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp GAGTTCAAGATTAGCATGGTATTTAGTGTGAGCTCAGGACTCCAACAACCCATCAGCGGATTGTTGGGCTaGGCGGGGGTCGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: EFKISMVFSVSSGLQQPISGLLG*AGVAPA
Trigger: GGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCT...GATGGGTTGTTGGAGTCCTGAGCTCACACTAAATACCATGCTAATCTTGAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp TCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTGAGGTGGTCTGGGGCTaGGAGGTAGCGGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: SCLHVRRSQSSFKAVSSAEVVWG*EVAVKL
Trigger: CAGTTTGACCGCTACCTCTCAGCCCCAGACCACCTC...AGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CCA 90 bp ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTAAGGGCTTCCATGGCCTaGGATAACACCGCAGACACA +
Preference number: 4 (lower is better)
Translates to: TTAPHPSGICLLCCTSFLRASMA*DNTADT
Trigger: TGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCT...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp TACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAGGGTCCGAGGTCAGGTaGTGGGAGCTCAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: YSSGWTHVFMYDAPSHPSGSEVR*WELNLV
Trigger: GACAAGGTTGAGCTCCCACCACCTGACCTCGGACCC...TGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CCA 90 bp CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGTTTGTATGCGTTGTCTaGATTCATCACGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: RLPVLEQAEAVCTGSLLKFVCVV*IHHGCM
Trigger: CATGCAGCCGTGATGAATCCAGACAACGCATACAAA...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp GTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGTGCGACTTGTCATATCCTaGCAACAGCTGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: VRRSQSSFKAVSSARKSVRLVIS*QQLLMA
Trigger: GGCCATGAGCAGCTGTTGTCAGGATATGACAAGTCG...CACTGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCGACACACACCCTCGGTaGTATGCCCAACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: AIQLEESSGTFHKRTLIADTHPR*YAQRLL
Trigger: AAGAAGTCGTTGGGCATATCACCGAGGGTGTGTGTC...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp GACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTAGCAAAGTGAGGGTCTaGCTCAGGGCAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: DSCLHVRRSQSSFKAVSSSKVRV*LRAELG
Trigger: ACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTGCT...AGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: PAPGMKVSRKGQQPECFSVSRIL*SLRDSG
Trigger: TCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGAC...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: HVRRSQSSFKAVSSARKSVSRIL*SLRDSG
Trigger: TCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGAC...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGGTGACCTATGAAGGATaGTCTCTGGATCTTTGTATG +
Preference number: 4 (lower is better)
Translates to: RLPVLEQAEAVCTGSLLKVTYEG*SLDLCM
Trigger: CATACAAAGATCCAGAGAGCATCCTTCATAGGTCAC...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp AGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTAGGGCTTCCATGGCCTaGGATAACACCGCAGACACA +
Preference number: 4 (lower is better)
Translates to: SPGCSYSSGWTHVFMYDARASMA*DNTADT
Trigger: TGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCT...AGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp AGCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACACATCACAGGACTCTTaGGTCAGTGCTCTGCACTCG +
Preference number: 4 (lower is better)
Translates to: SSPGCSYSSGWTHVFMYDTSQDS*VSALHS
Trigger: CGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGT...GTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTCCTTCACTGTGGCACTaGGAAGGGAATTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PAPGMKVSRKGQQPECFSPSLWH*EGNSAV
Trigger: CACAGCTGAATTCCCTTCTCAGTGCCACAGTGAAGG...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCTGCTCAGGTGACCTATaGAGGATGCTCTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: AIQLEESSGTFHKRTLIACSGDL*RMLSGS
Trigger: AGATCCAGAGAGCATCCTTCATAGGTCACCTGAGCA...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp TACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAACCCACGAACAACAGTaGTTCGTCGGGCCGTTCCAA +
Preference number: 4 (lower is better)
Translates to: YSSGWTHVFMYDAPSHPSTHEQQ*FVGPFQ
Trigger: TTGGAACGGCCCGACGAAGCACTGTTGTTCGTGGGT...TGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAGCTTGATGGAGCCATaGCAGCATGTCTCCCACATA +
Preference number: 4 (lower is better)
Translates to: AIQLEESSGTFHKRTLIASLMEP*QHVSHI
Trigger: TATGTGGGAGACATGCTGGCATGGCTCCATCAAGCT...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp TTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCACCTAGGTGTACCTCCTaGCCCTCCTCTTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: FWMDSCLHVRRSQSSFKAPRCTS*PSSCKS
Trigger: GCTCTTACAAGAGGAGGGCCAGGAGGTACACCTAGG...TGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp AAGCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGAGACACACACCCTCGGTaGTATGCCCAACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: KQSWVFLQFWMDSCLHVRDTHPR*YAQRLL
Trigger: AAGAAGTCGTTGGGCATATCACCGAGGGTGTGTGTC...TCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAACTTCACCTGCTCAGGTaGCCTATGAAGGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: QLEESSGTFHKRTLIANKLHLLR*PMKDAL
Trigger: GAGAGCATCCTTCATAGGTCACCTGAGCAGGTGAAG...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp ACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAGCACAGGACAAAACCTaGACAAAGTCAGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: TVLDGLMSSCTTLPVILQAQDKT*TKSACR
Trigger: TCGGCAGGCTGACTTTGTGCAGGTTTTGTCCTGTGC...TTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CCA 90 bp ACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAATACCTCAGCGGGTCATaGGAGTGCATTTCAATGGGC +
Preference number: 4 (lower is better)
Translates to: TVLDGLMSSCTTLPVILQYLSGS*ECISMG
Trigger: GCCCATTGAAATGCACTCCCATGACCCGCTGAGGTA...TTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CCA 90 bp GCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCCAGGTTGGGCATATTaGCTAAAGAACCCTGATCAG +
Preference number: 4 (lower is better)
Translates to: AVLGVPTVLDGLMSSCTTPGWAY*LKNPDQ
Trigger: CTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGG...CGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp AGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCTTCATCATGTACAGTaGGTTGACCATGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: SPGCSYSSGWTHVFMYDALHHVQ*VDHERG
Trigger: GCCACGTTCATGGTCAACTCACTGTACATGATGAAG...AGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp TGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATAGCTTGATGGAGCCATaGCAGCATGTCTCCCACATA +
Preference number: 4 (lower is better)
Translates to: CSYSSGWTHVFMYDAPSHSLMEP*QHVSHI
Trigger: TATGTGGGAGACATGCTGGCATGGCTCCATCAAGCT...ATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp AGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCAGCTGTGCCTAAATTaGTGGCTGACACTGTACACA +
Preference number: 4 (lower is better)
Translates to: SPGCSYSSGWTHVFMYDAQLCLN*WLTLYT
Trigger: TGTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTG...AGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp AAGCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGATGGCCATGTCAGCTGTaGCTAAATTGCTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: KQSWVFLQFWMDSCLHVRWPCQL*LNCWLT
Trigger: TGTCAGCCAGCAATTTAGGCACAGCTGACATGGCCA...TCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp GAGTTCAAGATTAGCATGGTATTTAGTGTGAGCTCAGGACTCCAACAACCCATCGTCAAACTGAGCCATTaGAGCCTTCAGCGCCACAGC +
Preference number: 4 (lower is better)
Translates to: EFKISMVFSVSSGLQQPIVKLSH*SLQRHS
Trigger: GCTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGAC...GATGGGTTGTTGGAGTCCTGAGCTCACACTAAATACCATGCTAATCTTGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGATGGATTCATCACGGCTaGATGCACTTCCGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: SLNVSLPIKPINTYFGIRWIHHG*MHFRVG
Trigger: GCCTACGCGGAAGTGCATGCAGCCGTGATGAATCCA...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCATACCTCAGCGGGTCATaGGAGTGCATTTCAATGGGC +
Preference number: 4 (lower is better)
Translates to: PHQTHQHLFWDQKHGLGSYLSGS*ECISMG
Trigger: GCCCATTGAAATGCACTCCCATGACCCGCTGAGGTA...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp TCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATAAGACAGGCCTGTCCTaGAGGGCTTCCATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: STPILGSETWARFKKLFNKTGLS*RASMAW
Trigger: CCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTT...ATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp CGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAACGGTCAAACTGAGCCATTaGAGCCTTCAGCGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RDLSPLLYFLSISILSKTVKLSH*SLQRHS
Trigger: GCTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGAC...CGTTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp GACCTATCAGCTAAGTGTCTATTTAAATACATACAAACCTGCACCAGGCATGAACCTGCAGGGCTTCCATaGCCTGGGATAACACCGCAG +
Preference number: 4 (lower is better)
Translates to: DLSAKCLFKYIQTCTRHEPAGLP*PGITPQ
Trigger: CTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGG...TTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAGACACTTAGCTGATAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAAGGGTCCGAGGTCAGGTaGTGGGAGCTCAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: GLSLSSDLSAKCLFKYIQGSEVR*WELNLV
Trigger: GACAAGGTTGAGCTCCCACCACCTGACCTCGGACCC...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCACTGTGCCTAAATTGCTaGCTGACACTGTACACATCT +
Preference number: 4 (lower is better)
Translates to: HVRRSQSSFKAVSSARKSLCLNC*LTLYTS
Trigger: AGATGTGTACAGTGTCAGCCAGCAATTTAGGCACAG...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAACCTGTACATCTTCATTaGTGCTTTCAAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QLEESSGTFHKRTLIANKPVHLH*CFQAPP
Trigger: AGGAGGAGCTTGAAAGCATCAATGAAGATGTACAGG...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp TGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTGTACATCTTCATTaGTGCTTTCAAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CSYSSGWTHVFMYDAPSHPVHLH*CFQAPP
Trigger: AGGAGGAGCTTGAAAGCATCAATGAAGATGTACAGG...ATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCTTTCACTCTTCCCAATaGCTTGAAAAAGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: AIQLEESSGTFHKRTLIAFHSSQ*LEKVLS
Trigger: ACTGAGGACTTTTTCAAGGCATTGGGAAGAGTGAAA...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCACAGCTGTGCCTAAATTaGTGGCTGACACTGTACACA +
Preference number: 4 (lower is better)
Translates to: PHQTHQHLFWDQKHGLGSQLCLN*WLTLYT
Trigger: TGTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTG...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTACGAGCTCTGTAGACTaGTTTATAATCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PAPGMKVSRKGQQPECFSTSSVD*FIICSF
Trigger: GAAGGAGCAGATTATAAAGCAGTCTACAGAGCTCGT...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTCTCTGGATCTTTGTATaGGTTGTCTGGATTCATCAC +
Preference number: 4 (lower is better)
Translates to: PAPGMKVSRKGQQPECFSLWIFV*VVWIHH
Trigger: GTGATGAATCCAGACAACGCATACAAAGATCCAGAG...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp CTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCACTAATCTCTAGTCTTTaGTTTTCCGCTTGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LGVPTVLDGLMSSCTTLPLISSL*FSACSL
Trigger: TAAGCTGCAAGCGGAAAACCAAAGACTAGAGATTAG...TGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
3UTR CAA 72 bp AGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATaGCCAATAAAGCTGTGGTTTAGATGTTACACAGAA +
Preference number: 4 (lower is better)
Translates to: RKAAGPSISGRS*PIKLWFRCYTE
Trigger: TTCTGTGTAACATCTAAACCACAGCTTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAAACCTTGACGTCATTATaGATCTGTTTCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QLEESSGTFHKRTLIANKTLTSL*ICFTLP
Trigger: GGGAAGAGTGAAACAGATTCATAATGACGTCAAGGT...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp CTATTTAAATACATACAAACCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACATCACAGGACTCTTaGGTCAGTGCTCTGCACTCG +
Preference number: 4 (lower is better)
Translates to: LFKYIQTCTRHESKQEGTTSQDS*VSALHS
Trigger: CGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGT...TGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCTTTTCTTTAACACCCTaGGCAGTTACATGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: AIQLEESSGTFHKRTLIAFSLTP*AVTCFK
Trigger: CTTAAAGCATGTAACTGCTCAGGGTGTTAAAGAAAA...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAACTTTGGTTTTCCGCTTaGAGCTTAGTGGTCTTTACT +
Preference number: 4 (lower is better)
Translates to: QLEESSGTFHKRTLIANKLWFSA*SLVVFT
Trigger: AGTAAAGACCACTAAGCTGCAAGCGGAAAACCAAAG...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp GTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGTGTTTTTGCTTAGCAGGTaGATTTCCTCAATTGTTGTC +
Preference number: 4 (lower is better)
Translates to: VRRSQSSFKAVSSARKSVFLLSR*ISSIVV
Trigger: GACAACAATTGAGGAAATGCACCTGCTAAGCAAAAA...CACTGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CCA 90 bp TCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTGCCCAACGACTTCTTaGATATTTTCTTTAACACCC +
Preference number: 4 (lower is better)
Translates to: SYSSGWTHVFMYDAPSHPCPTTS*IFSLTP
Trigger: GGGTGTTAAAGAAAATATCCAAGAAGTCGTTGGGCA...AGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR TCA 90 bp GACCTATCAGCTAAGTGTCTATTTAAATACATACAAACCTGCACCAGGCATGAACGACTTGTCATATCCTaGCAACAGCTGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: DLSAKCLFKYIQTCTRHERLVIS*QQLLMA
Trigger: GGCCATGAGCAGCTGTTGTCAGGATATGACAAGTCG...TTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAGACACTTAGCTGATAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp CTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTTTCGCAAAAGAACCTTaGCGTCATTATGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: LDGLMSSCTTLPVILQSSFAKEP*RHYESV
Trigger: AACAGATTCATAATGACGTCAAGGTTCTTTTGCGAA...ACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp ACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAATTTCACTCTTCCCAATaGCTTGAAAAAGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TVLDGLMSSCTTLPVILQFHSSQ*LEKVLS
Trigger: ACTGAGGACTTTTTCAAGGCATTGGGAAGAGTGAAA...TTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAAGCACAGGACAAAACCTaGACAAAGTCAGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: GLSLSSDLSAKCLFKYIQAQDKT*TKSACR
Trigger: TCGGCAGGCTGACTTTGTGCAGGTTTTGTCCTGTGC...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGAGACTGCTTTATAATCTaGTCCTTCACTGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SLNVSLPIKPINTYFGIRDCFII*SFTVAL
Trigger: CAGTGCCACAGTGAAGGAGCAGATTATAAAGCAGTC...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp CGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAACGCCAGGTTGGGCATATTaGCTAAAGAACCCTGATCAG +
Preference number: 4 (lower is better)
Translates to: RDLSPLLYFLSISILSKTPGWAY*LKNPDQ
Trigger: CTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGG...CGTTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAATTCGCAAAAGAACCTTaGCGTCATTATGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: QLEESSGTFHKRTLIANKFAKEP*RHYESV
Trigger: AACAGATTCATAATGACGTCAAGGTTCTTTTGCGAA...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp TATGCTGTTTTGATAAATACACCATATAAATTCATTGAACTGACCAACCCGGCAACCCACGAACAACAGTaGTTCGTCGGGCCGTTCCAA +
Preference number: 4 (lower is better)
Translates to: YAVLINTPYKFIELTNPATHEQQ*FVGPFQ
Trigger: TTGGAACGGCCCGACGAAGCACTGTTGTTCGTGGGT...TGCCGGGTTGGTCAGTTCAATGAATTTATATGGTGTATTTATCAAAACAGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR GCA 90 bp GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAATGGCCATGTCAGCTGTaGCTAAATTGCTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: GLSLSSDLSAKCLFKYIQWPCQL*LNCWLT
Trigger: TGTCAGCCAGCAATTTAGGCACAGCTGACATGGCCA...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCATGCCCAACGACTTCTTaGATATTTTCTTTAACACCC +
Preference number: 4 (lower is better)
Translates to: PHQTHQHLFWDQKHGLGSCPTTS*IFSLTP
Trigger: GGGTGTTAAAGAAAATATCCAAGAAGTCGTTGGGCA...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGAATGAAGGATGCTCTCTaGATCTTTGTATGCGTTGTC +
Preference number: 4 (lower is better)
Translates to: SLNVSLPIKPINTYFGIRMKDAL*IFVCVV
Trigger: GACAACGCATACAAAGATCCAGAGAGCATCCTTCAT...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
3UTR CAA 72 bp ATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTaGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: MFLSPSNPSTPI*GSETWARFKKL
Trigger: TAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp TCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATCTTCATCATGTACAGTaGGTTGACCATGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: STPILGSETWARFKKLFNLHHVQ*VDHERG
Trigger: GCCACGTTCATGGTCAACTCACTGTACATGATGAAG...ATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGACTAATCTCTAGTCTTTaGTTTTCCGCTTGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: SLNVSLPIKPINTYFGIRLISSL*FSACSL
Trigger: TAAGCTGCAAGCGGAAAACCAAAGACTAGAGATTAG...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR TCA 90 bp GAGTTCAAGATTAGCATGGTATTTAGTGTGAGCTCAGGACTCCAACAACCCATCTTTTCTTTAACACCCTaGGCAGTTACATGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: EFKISMVFSVSSGLQQPIFSLTP*AVTCFK
Trigger: CTTAAAGCATGTAACTGCTCAGGGTGTTAAAGAAAA...GATGGGTTGTTGGAGTCCTGAGCTCACACTAAATACCATGCTAATCTTGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR GCA 90 bp AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGATTTTTGCTTAGCAGGTaGATTTCCTCAATTGTTGTC +
Preference number: 4 (lower is better)
Translates to: SLNVSLPIKPINTYFGIRFLLSR*ISSIVV
Trigger: GACAACAATTGAGGAAATGCACCTGCTAAGCAAAAA...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CCA 90 bp TCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATCTGTGCCTAAATTGCTaGCTGACACTGTACACATCT +
Preference number: 4 (lower is better)
Translates to: STPILGSETWARFKKLFNLCLNC*LTLYTS
Trigger: AGATGTGTACAGTGTCAGCCAGCAATTTAGGCACAG...ATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS GCA 90 bp GTCTCCAGGATCTTGTGCAGCTTACGCGACAGCGGATTGTTGGGCTaGGCGGGGGTCGCACCTGCCCCATTACTGAAGCCATTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: VSRILCSLRDSGLLG*AGVAPAPLLKPLAA
Trigger: GGCCGCCAATGGCTTCAGTAATGGGGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
ENSMUST00000195183.2
CDS-3UTR CAA 90 bp GTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCATTACTGAAGCCATaGGCGGCCCCGGAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: VLGVPTVLDGLMSSCTTLPLLKP*AAPEAG
Trigger: CCCCGCCTCCGGGGCCGCCAATGGCTTCAGTAATGG...GAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGTGCTCTGCACTCGCTTaGAGCCCACCGGTAAAGTCT +
Preference number: 5 (lower is better)
Translates to: RLPVLEQAEAVCTGSLLKCSALA*SPPVKS
Trigger: AGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCA...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS GCA 90 bp TCCAACATCTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGATTGTTGGGCTGCGCGGGGGTCGCA +
Preference number: 5 (lower is better)
Translates to: SNISLSFSSRVSRIL*SLRDSGLLGCAGVA
Trigger: TGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAGATGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 90 bp AGCCATGCCAGCATGTCTCCCACATACCTCAGCGGGTCATGGGAGTaGATTTCAATGGGCCTAGGTGTACCTCCTGGCCCTCCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: SHASMSPTYLSGSWE*ISMGLGVPPGPPLV
Trigger: TACAAGAGGAGGGCCAGGAGGTACACCTAGGCCCATTGAAATGCACTCCCATGACCCGCTGAGGTATGTGGGAGACATGCTGGCATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 90 bp TCCAGATGTTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGATTGTTGGGCTGCGCGGGGGTCGCA +
Preference number: 5 (lower is better)
Translates to: SRCSLSFSSRVSRIL*SLRDSGLLGCAGVA
Trigger: TGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAACATCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195183.2
CDS-3UTR CAA 90 bp CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGCACATCACAGGACTCTaGAGTCAGTGCTCTGCACTC +
Preference number: 5 (lower is better)
Translates to: RLPVLEQAEAVCTGSLLKHITGL*SQCSAL
Trigger: GAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTG...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS CCA 90 bp AGTGAGGGTCTGACTCAGGGCAGAGCTGGGTCCGAGGTCAGGTGGTaGGAGCTCAACCTTGTCCATCAGTTTATTCGCATGGAGACTCAA +
Preference number: 5 (lower is better)
Translates to: SEGLTQGRAGSEVRW*ELNLVHQFIRMETQ
Trigger: TTGAGTCTCCATGCGAATAAACTGATGGACAAGGTTGAGCTCCCACCACCTGACCTCGGACCCAGCTCTGCCCTGAGTCAGACCCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 90 bp CAAAGTGAGGGTCTGACTCAGGGCAGAGCTGGGTCCGAGGTCAGGTaGTGGGAGCTCAACCTTGTCCATCAGTTTATTCGCATGGAGACT +
Preference number: 5 (lower is better)
Translates to: QSEGLTQGRAGSEVR*WELNLVHQFIRMET
Trigger: AGTCTCCATGCGAATAAACTGATGGACAAGGTTGAGCTCCCACCACCTGACCTCGGACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGGAAGTCAGCTGGAACTaGGCCAAAAAGGCATCCACA +
Preference number: 5 (lower is better)
Translates to: RLPVLEQAEAVCTGSLLKEVSWN*AKKAST
Trigger: TGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTC...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGGCCACAGCATCCAGGTaGGGCATATTGGCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: RLPVLEQAEAVCTGSLLKATASR*GILAKE
Trigger: TTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGC...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTAGGTCAAACTGAGCCATaGCAGCCTTCAGCGCCACAG +
Preference number: 5 (lower is better)
Translates to: TTAPHPSGICLLCCTSFLGQTEP*QPSAPQ
Trigger: CTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGACC...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS TCA 90 bp CAAAACCTGCACAAAGTCAGCCTGCCGAGCATCCAAGGGGATGACTaGAGAATCATGCGACGCCAGAATATCCCGCAGCAAAGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: QNLHKVSLPSIQGDD*RIMRRQNIPQQSEG
Trigger: ACCCTCACTTTGCTGCGGGATATTCTGGCGTCGCATGATTCTTCAGTCATCCCCTTGGATGCTCGGCAGGCTGACTTTGTGCAGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 90 bp GATGCTCTCTGGATCTTTGTATGCGTTGTCTGGATTCATCACGGCTaGATGCACTTCCGCGTAGGCTCTGCAGACGAGCTCTGTAGACTG +
Preference number: 5 (lower is better)
Translates to: DALWIFVCVVWIHHG*MHFRVGSADELCRL
Trigger: CAGTCTACAGAGCTCGTCTGCAGAGCCTACGCGGAAGTGCATGCAGCCGTGATGAATCCAGACAACGCATACAAAGATCCAGAGAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGC +
Preference number: 5 (lower is better)
Translates to: PAPGMKVSRKGQQPECFSRVSRI*CSLRDS
Trigger: GCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACG...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGACTCTTCCCAATGCCTaGAAAAAGTCCTCAGTAACG +
Preference number: 5 (lower is better)
Translates to: RLPVLEQAEAVCTGSLLKTLPNA*KKSSVT
Trigger: CGTTACTGAGGACTTTTTCAAGGCATTGGGAAGAGT...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS TCA 90 bp TGCTTTAAGAGAGCTTCCAGATGTTCCTTCTCAGAGGCAGTAGCTTaGTGGAGCCATGCCAGCATGTCTCCCACATACCTCAGCGGGTCA +
Preference number: 5 (lower is better)
Translates to: CFKRASRCSFSEAVA*WSHASMSPTYLSGS
Trigger: TGACCCGCTGAGGTATGTGGGAGACATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAGAAGGAACATCTGGAAGCTCTCTTAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 90 bp CAGCGGGTCATGGGAGTGCATTTCAATGGGCCTAGGTGTACCTCCTaGCCCTCCTCTTGTAAGAGCATCAATAAACCCACGAACAACAGT +
Preference number: 5 (lower is better)
Translates to: QRVMGVHFNGPRCTS*PSSCKSINKPTNNS
Trigger: ACTGTTGTTCGTGGGTTTATTGATGCTCTTACAAGAGGAGGGCCAGGAGGTACACCTAGGCCCATTGAAATGCACTCCCATGACCCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp TTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCACGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGC +
Preference number: 5 (lower is better)
Translates to: FWMDSCLHVRRSQSSFKARVSRI*CSLRDS
Trigger: GCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACG...TGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp AGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTTGCTCTGCACTCGCTTaGAGCCCACCGGTAAAGTCT +
Preference number: 5 (lower is better)
Translates to: SPGCSYSSGWTHVFMYDACSALA*SPPVKS
Trigger: AGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCA...AGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp CTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCACACATCACAGGACTCTaGAGTCAGTGCTCTGCACTC +
Preference number: 5 (lower is better)
Translates to: LGVPTVLDGLMSSCTTLPHITGL*SQCSAL
Trigger: GAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTG...TGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp CTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTCTCAGAGGCAGTAGCTaGATGGAGCCATGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: LDGLMSSCTTLPVILQSSLRGSS*MEPCQH
Trigger: ATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAG...ACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp TGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATGGTCAAACTGAGCCATaGCAGCCTTCAGCGCCACAG +
Preference number: 5 (lower is better)
Translates to: CSYSSGWTHVFMYDAPSHGQTEP*QPSAPQ
Trigger: CTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGACC...ATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS CCA 90 bp CCTCCTCTTGTACCGCGGAGGAGACTCATTTCATCCGAAGTCAGCTaGAACTTGGCCAAAAAGGCATCCACAACCTGTGCTCTAATCTCT +
Preference number: 5 (lower is better)
Translates to: PPLVPRRRLISSEVS*NLAKKASTTCALIS
Trigger: AGAGATTAGAGCACAGGTTGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTCGGATGAAATGAGTCTCCTCCGCGGTACAAGAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 90 bp CTAAGGTATACTTGTATAAGACAGGCCTGTCCTGCAGGGCTTCCATaGCCTGGGATAACACCGCAGACACATCACAGGACTCTTGAGTCA +
Preference number: 5 (lower is better)
Translates to: LRYTCIRQACPAGLP*PGITPQTHHRTLES
Trigger: TGACTCAAGAGTCCTGTGATGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTTATACAAGTATACCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 90 bp GGTCAAACTGAGCCATTGCAGCCTTCAGCGCCACAGCATCCAGGTTaGGCATATTGGCTAAAGAACCCTGATCAGGTCTATGTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: GQTEPLQPSAPQHPG*AYWLKNPDQVYVAV
Trigger: TACAGCAACATAGACCTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGCTGTGCCTAAATaGCTGGCTGACACTGTACAC +
Preference number: 5 (lower is better)
Translates to: TTAPHPSGICLLCCTSFLSAVPK*LADTVH
Trigger: GTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTGA...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS GCA 90 bp GGGATAACACCGCAGACACATCACAGGACTCTTGAGTCAGTGCTCTaGACTCGCTTTGAGCCCACCGGTAAAGTCTTTCATAAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: GITPQTHHRTLESVL*TRFEPTGKVFHKQF
Trigger: AAACTGCTTATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTGTCTGCGGTGTTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp TCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAAGGCTGAAAGGGCCTaGAGAGCTTCCAACATCTCC +
Preference number: 5 (lower is better)
Translates to: SCLHVRRSQSSFKAVSSAKAERA*RASNIS
Trigger: GGAGATGTTGGAAGCTCTCAAGGCCCTTTCAGCCTT...AGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp GCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTTGAGTCTGTTCTTTaGCTGCCTGTAAGCGACTTG +
Preference number: 5 (lower is better)
Translates to: AVLGVPTVLDGLMSSCTTLESVL*LPVSDL
Trigger: CAAGTCGCTTACAGGCAGCAAAAGAACAGACTCAAG...CGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGAAGTCAGCTGGAACTaGGCCAAAAAGGCATCCACA +
Preference number: 5 (lower is better)
Translates to: HVRRSQSSFKAVSSARKSEVSWN*AKKAST
Trigger: TGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTC...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGCCACAGCATCCAGGTaGGGCATATTGGCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: HVRRSQSSFKAVSSARKSATASR*GILAKE
Trigger: TTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGC...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTAGGATCTTTGTATGCGTaGTCTGGATTCATCACGGCT +
Preference number: 5 (lower is better)
Translates to: TTAPHPSGICLLCCTSFLGSLYA*SGFITA
Trigger: AGCCGTGATGAATCCAGACAACGCATACAAAGATCC...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS GCA 90 bp GTTCCAAATTCATCTAAGGTATACTTGTATAAGACAGGCCTGTCCTaGAGGGCTTCCATGGCCTGGGATAACACCGCAGACACATCACAG +
Preference number: 5 (lower is better)
Translates to: VPNSSKVYLYKTGLS*RASMAWDNTADTSQ
Trigger: CTGTGATGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTTATACAAGTATACCTTAGATGAATTTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp TATGCTGTTTTGATAAATACACCATATAAATTCATTGAACTGACCAACCCGGCACCATTACTGAAGCCATaGGCGGCCCCGGAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: YAVLINTPYKFIELTNPAPLLKP*AAPEAG
Trigger: CCCCGCCTCCGGGGCCGCCAATGGCTTCAGTAATGG...TGCCGGGTTGGTCAGTTCAATGAATTTATATGGTGTATTTATCAAAACAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTGCTTCCAACATCTCCTaGTCATTTTCTAGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: PAPGMKVSRKGQQPECFSASNIS*SFSSRV
Trigger: GACACGGCTAGAAAATGACAAGGAGATGTTGGAAGC...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp GACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTTCAGCTGTGCCTAAATaGCTGGCTGACACTGTACAC +
Preference number: 5 (lower is better)
Translates to: DSCLHVRRSQSSFKAVSSSAVPK*LADTVH
Trigger: GTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTGA...AGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp TGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATGCCTGTACATCTTCATaGATGCTTTCAAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CSYSSGWTHVFMYDAPSHACTSS*MLSSSS
Trigger: GGAGGAGCTTGAAAGCATCAATGAAGATGTACAGGC...ATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS TCA 90 bp GATGGGCTTCAATCTGAAACTGAAGCATTTCTAGGCGCCTGTCTGTaGATTCGAACAGAGCCAGGGTTGTCTTCATCATGTACAGTGAGT +
Preference number: 5 (lower is better)
Translates to: DGLQSETEAFLGACL*IRTEPGLSSSCTVS
Trigger: ACTCACTGTACATGATGAAGACAACCCTGGCTCTGTTCGAATTCACAGACAGGCGCCTAGAAATGCTTCAGTTTCAGATTGAAGCCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 90 bp AGCAGTTTCTTGAAGCAAGGCCATCTGTTCCATAATCTCCAAACCTaGCGTCTGCTGGTTGGTTCGCAAAAGAACCTTGACGTCATTATG +
Preference number: 5 (lower is better)
Translates to: SSFLKQGHLFHNLQT*RLLVGSQKNLDVIM
Trigger: CATAATGACGTCAAGGTTCTTTTGCGAACCAACCAGCAGACGGCAGGTTTGGAGATTATGGAACAGATGGCCTTGCTTCAAGAAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCATTTACAAACTCCTCATaGATGGCTAAGCTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: HVRRSQSSFKAVSSARKSFTNSS*MAKLLR
Trigger: ACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAA...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp GACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTACTCTTCCCAATGCCTaGAAAAAGTCCTCAGTAACG +
Preference number: 5 (lower is better)
Translates to: DSCLHVRRSQSSFKAVSSTLPNA*KKSSVT
Trigger: CGTTACTGAGGACTTTTTCAAGGCATTGGGAAGAGT...AGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp CTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTTCATAAGCAGTTTCTaGAAGCAAGGCCATCTGTTC +
Preference number: 5 (lower is better)
Translates to: LMSSCTTLPVILQSSEFCFISSF*KQGHLF
Trigger: GAACAGATGGCCTTGCTTCAAGAAACTGCTTATGAA...GCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTTCATCTAAGGTATACTaGTATAAGACAGGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: PAPGMKVSRKGQQPECFSSSKVY*YKTGLS
Trigger: GGACAGGCCTGTCTTATACAAGTATACCTTAGATGA...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp CTATTTAAATACATACAAACCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACACTCAGAGGCAGTAGCTaGATGGAGCCATGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: LFKYIQTCTRHESKQEGTLRGSS*MEPCQH
Trigger: ATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAG...TGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCATGCCCAACGACTTCTaGGATATTTTCTTTAACACC +
Preference number: 5 (lower is better)
Translates to: AIQLEESSGTFHKRTLIAMPNDF*DIFFNT
Trigger: GGTGTTAAAGAAAATATCCAAGAAGTCGTTGGGCAT...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp TCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTTCATCTAAGGTATACTaGTATAAGACAGGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SCLHVRRSQSSFKAVSSASSKVY*YKTGLS
Trigger: GGACAGGCCTGTCTTATACAAGTATACCTTAGATGA...AGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAAAAGGCTGAAAGGGCCTaGAGAGCTTCCAACATCTCC +
Preference number: 5 (lower is better)
Translates to: GLSLSSDLSAKCLFKYIQKAERA*RASNIS
Trigger: GGAGATGTTGGAAGCTCTCAAGGCCCTTTCAGCCTT...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCATTTACAAACTCCTCATaGATGGCTAAGCTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: PHQTHQHLFWDQKHGLGSFTNSS*MAKLLR
Trigger: ACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAA...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp CCTAAGCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTAATGCCCAACGACTTCTaGGATATTTTCTTTAACACC +
Preference number: 5 (lower is better)
Translates to: PKQSWVFLQFWMDSCLHVMPNDF*DIFFNT
Trigger: GGTGTTAAAGAAAATATCCAAGAAGTCGTTGGGCAT...TACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193432.6
CDS-3UTR CAA 90 bp AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGAATGCTCTCTGGATCTTaGTATGCGTTGTCTGGATTC +
Preference number: 5 (lower is better)
Translates to: SLNVSLPIKPINTYFGIRMLSGS*YALSGF
Trigger: GAATCCAGACAACGCATACAAAGATCCAGAGAGCAT...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp AGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAAGCCTGTACATCTTCATaGATGCTTTCAAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGICLLCCTSFLSVFFPKACTSS*MLSSSS
Trigger: GGAGGAGCTTGAAAGCATCAATGAAGATGTACAGGC...TTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp TCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATCTTGAGTCTGTTCTTTaGCTGCCTGTAAGCGACTTG +
Preference number: 5 (lower is better)
Translates to: STPILGSETWARFKKLFNLESVL*LPVSDL
Trigger: CAAGTCGCTTACAGGCAGCAAAAGAACAGACTCAAG...ATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS-3UTR CAA 90 bp GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAATTCATAAGCAGTTTCTaGAAGCAAGGCCATCTGTTC +
Preference number: 5 (lower is better)
Translates to: GLSLSSDLSAKCLFKYIQFISSF*KQGHLF
Trigger: GAACAGATGGCCTTGCTTCAAGAAACTGCTTATGAA...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS CAA 72 bp TCCAGGATCTTGTGCAGCTTACGCGACAGCGGATTGTaGGGCTGCGCGGGGGTCGCACCTGCCCCATTACTG +
Preference number: 6 (lower is better)
Translates to: SRILCSLRDSGL*GCAGVAPAPLL
Trigger: CAGTAATGGGGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
ENSMUST00000195183.2
CDS CAA 72 bp GTCTCCAGGATCTTGTGCAGCTTACGCGACAGCGGATaGTTGGGCTGCGCGGGGGTCGCACCTGCCCCATTA +
Preference number: 6 (lower is better)
Translates to: VSRILCSLRDSG*LGCAGVAPAPL
Trigger: TAATGGGGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
ENSMUST00000195183.2
CDS TCA 72 bp TGCGACGCCAGAATATCCCGCAGCAAAGTGAGGGTCTaGCTCAGGGCAGAGCTGGGTCCGAGGTCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: CDARISRSKVRV*LRAELGPRSGG
Trigger: ACCACCTGACCTCGGACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTGCTGCGGGATATTCTGGCGTCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 90 bp GCTTCCAACATCTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGCGGATTGTTGGGCTGCGCGGGGGTC +
Preference number: 6 (lower is better)
Translates to: ASNISLSFSSRVSRI*CSLRDSGLLGCAGV
Trigger: GACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAGATGTTGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 90 bp GCTTCCAGATGTTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGCGGATTGTTGGGCTGCGCGGGGGTC +
Preference number: 6 (lower is better)
Translates to: ASRCSLSFSSRVSRI*CSLRDSGLLGCAGV
Trigger: GACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAACATCTGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195183.2
CDS TCA 72 bp AAGAATCATGCGACGCCAGAATATCCCGCAGCAAAGTaGGGGTCTGACTCAGGGCAGAGCTGGGTCCGAGGT +
Preference number: 6 (lower is better)
Translates to: KNHATPEYPAAK*GSDSGQSWVRG
Trigger: ACCTCGGACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTGCTGCGGGATATTCTGGCGTCGCATGATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp AGCATGTCTCCCACATACCTCAGCGGGTCATGGGAGTaGATTTCAATGGGCCTAGGTGTACCTCCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: SMSPTYLSGSWE*ISMGLGVPPGP
Trigger: AGGGCCAGGAGGTACACCTAGGCCCATTGAAATGCACTCCCATGACCCGCTGAGGTATGTGGGAGACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp GCCTGCCGAGCATCCAAGGGGATGACTGAAGAATCATaGGACGCCAGAATATCCCGCAGCAAAGTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: ACRASKGMTEES*DARISRSKVRV
Trigger: GACCCTCACTTTGCTGCGGGATATTCTGGCGTCGCATGATTCTTCAGTCATCCCCTTGGATGCTCGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 72 bp CTGACTCAGGGCAGAGCTGGGTCCGAGGTCAGGTGGTaGGAGCTCAACCTTGTCCATCAGTTTATTCGCATG +
Preference number: 6 (lower is better)
Translates to: LTQGRAGSEVRW*ELNLVHQFIRM
Trigger: CATGCGAATAAACTGATGGACAAGGTTGAGCTCCCACCACCTGACCTCGGACCCAGCTCTGCCCTGAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
ENSMUST00000195183.2
CDS GCA 72 bp TCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGATTGTTGGGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: SLSFSSRVSRIL*SLRDSGLLGCA
Trigger: CGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
ENSMUST00000195183.2
CDS CCA 72 bp CATGCCAGCATGTCTCCCACATACCTCAGCGGGTCATaGGAGTGCATTTCAATGGGCCTAGGTGTACCTCCT +
Preference number: 6 (lower is better)
Translates to: HASMSPTYLSGS*ECISMGLGVPP
Trigger: AGGAGGTACACCTAGGCCCATTGAAATGCACTCCCATGACCCGCTGAGGTATGTGGGAGACATGCTGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS TCA 72 bp CACAAAGTCAGCCTGCCGAGCATCCAAGGGGATGACTaGAGAATCATGCGACGCCAGAATATCCCGCAGCAA +
Preference number: 6 (lower is better)
Translates to: HKVSLPSIQGDD*RIMRRQNIPQQ
Trigger: TTGCTGCGGGATATTCTGGCGTCGCATGATTCTTCAGTCATCCCCTTGGATGCTCGGCAGGCTGACTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp TCCAGGGCACAGGACAAAACCTGCACAAAGTCAGCCTaGCGAGCATCCAAGGGGATGACTGAAGAATCATGC +
Preference number: 6 (lower is better)
Translates to: SRAQDKTCTKSA*RASKGMTEESC
Trigger: GCATGATTCTTCAGTCATCCCCTTGGATGCTCGGCAGGCTGACTTTGTGCAGGTTTTGTCCTGTGCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp TGGATCTTTGTATGCGTTGTCTGGATTCATCACGGCTaGATGCACTTCCGCGTAGGCTCTGCAGACGAGCTC +
Preference number: 6 (lower is better)
Translates to: WIFVCVVWIHHG*MHFRVGSADEL
Trigger: GAGCTCGTCTGCAGAGCCTACGCGGAAGTGCATGCAGCCGTGATGAATCCAGACAACGCATACAAAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS CCA 72 bp ACTTGTATAAGACAGGCCTGTCCTGCAGGGCTTCCATaGCCTGGGATAACACCGCAGACACATCACAGGACT +
Preference number: 6 (lower is better)
Translates to: TCIRQACPAGLP*PGITPQTHHRT
Trigger: AGTCCTGTGATGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTTATACAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS TCA 72 bp AGAGCTTCCAGATGTTCCTTCTCAGAGGCAGTAGCTTaGTGGAGCCATGCCAGCATGTCTCCCACATACCTC +
Preference number: 6 (lower is better)
Translates to: RASRCSFSEAVA*WSHASMSPTYL
Trigger: GAGGTATGTGGGAGACATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAGAAGGAACATCTGGAAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp CCGCAGACACATCACAGGACTCTTGAGTCAGTGCTCTaGACTCGCTTTGAGCCCACCGGTAAAGTCTTTCAT +
Preference number: 6 (lower is better)
Translates to: PQTHHRTLESVL*TRFEPTGKVFH
Trigger: ATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTGTCTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 72 bp GTACCGCGGAGGAGACTCATTTCATCCGAAGTCAGCTaGAACTTGGCCAAAAAGGCATCCACAACCTGTGCT +
Preference number: 6 (lower is better)
Translates to: VPRRRLISSEVS*NLAKKASTTCA
Trigger: AGCACAGGTTGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTCGGATGAAATGAGTCTCCTCCGCGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 72 bp GAGCCATTGCAGCCTTCAGCGCCACAGCATCCAGGTTaGGCATATTGGCTAAAGAACCCTGATCAGGTCTAT +
Preference number: 6 (lower is better)
Translates to: EPLQPSAPQHPG*AYWLKNPDQVY
Trigger: ATAGACCTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGCGCTGAAGGCTGCAATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 72 bp ATCTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGCGGATTGTTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: ISLSFSSRVSRI*CSLRDSGLLGC
Trigger: GCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 72 bp GAGAGCTTCCAGATGTTCCTTCTCAGAGGCAGTAGCTaGATGGAGCCATGCCAGCATGTCTCCCACATACCT +
Preference number: 6 (lower is better)
Translates to: ESFQMFLLRGSS*MEPCQHVSHIP
Trigger: AGGTATGTGGGAGACATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAGAAGGAACATCTGGAAGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 72 bp TGTTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGCGGATTGTTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: CSLSFSSRVSRI*CSLRDSGLLGC
Trigger: GCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195183.2
CDS CAA 90 bp TACAGTGAGTTGACCATGAACGTGGCCATGTCAGCTGTGCCTAAATaGCTGGCTGACACTGTACACATCTGGAGGAGAGGATCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: YSELTMNVAMSAVPK*LADTVHIWRRGSRA
Trigger: TGCCCTGGATCCTCTCCTCCAGATGTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTGACATGGCCACGTTCATGGTCAACTCACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp TCATCTAAGGTATACTTGTATAAGACAGGCCTGTCCTaGAGGGCTTCCATGGCCTGGGATAACACCGCAGAC +
Preference number: 6 (lower is better)
Translates to: SSKVYLYKTGLS*RASMAWDNTAD
Trigger: GTCTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTTATACAAGTATACCTTAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 72 bp ATGGGAGTGCATTTCAATGGGCCTAGGTGTACCTCCTaGCCCTCCTCTTGTAAGAGCATCAATAAACCCACG +
Preference number: 6 (lower is better)
Translates to: MGVHFNGPRCTS*PSSCKSINKPT
Trigger: CGTGGGTTTATTGATGCTCTTACAAGAGGAGGGCCAGGAGGTACACCTAGGCCCATTGAAATGCACTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 72 bp CAGCCTTCAGCGCCACAGCATCCAGGTTGGGCATATTaGCTAAAGAACCCTGATCAGGTCTATGTTGCTGTA +
Preference number: 6 (lower is better)
Translates to: QPSAPQHPGWAY*LKNPDQVYVAV
Trigger: TACAGCAACATAGACCTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGCGCTGAAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CCA 72 bp ATGAAGGATGCTCTCTGGATCTTTGTATGCGTTGTCTaGATTCATCACGGCTGCATGCACTTCCGCGTAGGC +
Preference number: 6 (lower is better)
Translates to: MKDALWIFVCVV*IHHGCMHFRVG
Trigger: GCCTACGCGGAAGTGCATGCAGCCGTGATGAATCCAGACAACGCATACAAAGATCCAGAGAGCATCCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS CAA 72 bp TTGACCATGAACGTGGCCATGTCAGCTGTGCCTAAATaGCTGGCTGACACTGTACACATCTGGAGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: LTMNVAMSAVPK*LADTVHIWRRG
Trigger: TCCTCTCCTCCAGATGTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTGACATGGCCACGTTCATGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp GCTCTGCAGACGAGCTCTGTAGACTGCTTTATAATCTaGTCCTTCACTGTGGCACTGAGAAGGGAATTCAGC +
Preference number: 6 (lower is better)
Translates to: ALQTSSVDCFII*SFTVALRREFS
Trigger: GCTGAATTCCCTTCTCAGTGCCACAGTGAAGGAGCAGATTATAAAGCAGTCTACAGAGCTCGTCTGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS CAA 72 bp CGGAGGAGACTCATTTCATCCGAAGTCAGCTGGAACTaGGCCAAAAAGGCATCCACAACCTGTGCTCTAATC +
Preference number: 6 (lower is better)
Translates to: RRRLISSEVSWN*AKKASTTCALI
Trigger: GATTAGAGCACAGGTTGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTCGGATGAAATGAGTCTCCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 90 bp CTTGTACCGCGGAGGAGACTCATTTCATCCGAAGTCAGCTGGAACTaGGCCAAAAAGGCATCCACAACCTGTGCTCTAATCTCTAGTCTT +
Preference number: 6 (lower is better)
Translates to: LVPRRRLISSEVSWN*AKKASTTCALISSL
Trigger: AAGACTAGAGATTAGAGCACAGGTTGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTCGGATGAAATGAGTCTCCTCCGCGGTACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 90 bp GCACTCGCTTTGAGCCCACCGGTAAAGTCTTTCATAAGCAGTTTCTaGAAGCAAGGCCATCTGTTCCATAATCTCCAAACCTGCCGTCTG +
Preference number: 6 (lower is better)
Translates to: ALALSPPVKSFISSF*KQGHLFHNLQTCRL
Trigger: CAGACGGCAGGTTTGGAGATTATGGAACAGATGGCCTTGCTTCAAGAAACTGCTTATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 90 bp CGCAGACACATCACAGGACTCTTGAGTCAGTGCTCTGCACTCGCTTaGAGCCCACCGGTAAAGTCTTTCATAAGCAGTTTCTTGAAGCAA +
Preference number: 6 (lower is better)
Translates to: RRHITGLLSQCSALA*SPPVKSFISSFLKQ
Trigger: TTGCTTCAAGAAACTGCTTATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTGTCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 90 bp GTGAATTCGAACAGAGCCAGGGTTGTCTTCATCATGTACAGTGAGTaGACCATGAACGTGGCCATGTCAGCTGTGCCTAAATTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: VNSNRARVVFIMYSE*TMNVAMSAVPKLLA
Trigger: AGCCAGCAATTTAGGCACAGCTGACATGGCCACGTTCATGGTCAACTCACTGTACATGATGAAGACAACCCTGGCTCTGTTCGAATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp TTGAAGCAAGGCCATCTGTTCCATAATCTCCAAACCTaGCGTCTGCTGGTTGGTTCGCAAAAGAACCTTGAC +
Preference number: 6 (lower is better)
Translates to: LKQGHLFHNLQT*RLLVGSQKNLD
Trigger: GTCAAGGTTCTTTTGCGAACCAACCAGCAGACGGCAGGTTTGGAGATTATGGAACAGATGGCCTTGCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp GCAGTGTCTTCACCTGCTCAGGTGACCTATGAAGGATaGTCTCTGGATCTTTGTATGCGTTGTCTGGATTCA +
Preference number: 6 (lower is better)
Translates to: AVSSPAQVTYEG*SLDLCMRCLDS
Trigger: TGAATCCAGACAACGCATACAAAGATCCAGAGAGCATCCTTCATAGGTCACCTGAGCAGGTGAAGACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036665.10
CDS CAA 72 bp ATCACAGGACTCTTGAGTCAGTGCTCTGCACTCGCTTaGAGCCCACCGGTAAAGTCTTTCATAAGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: ITGLLSQCSALA*SPPVKSFISSF
Trigger: GAAACTGCTTATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCACTGACTCAAGAGTCCTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 72 bp AACAGAGCCAGGGTTGTCTTCATCATGTACAGTGAGTaGACCATGAACGTGGCCATGTCAGCTGTGCCTAAA +
Preference number: 6 (lower is better)
Translates to: NRARVVFIMYSE*TMNVAMSAVPK
Trigger: TTTAGGCACAGCTGACATGGCCACGTTCATGGTCAACTCACTGTACATGATGAAGACAACCCTGGCTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS GCA 72 bp AAGGCCATCTGTTCCATAATCTCCAAACCTGCCGTCTaGTGGTTGGTTCGCAAAAGAACCTTGACGTCATTA +
Preference number: 6 (lower is better)
Translates to: KAICSIISKPAV*WLVRKRTLTSL
Trigger: TAATGACGTCAAGGTTCTTTTGCGAACCAACCAGCAGACGGCAGGTTTGGAGATTATGGAACAGATGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS TCA 72 bp AACCTGCCGTCTGCTGGTTGGTTCGCAAAAGAACCTTaGCGTCATTATGAATCTGTTTCACTCTTCCCAATG +
Preference number: 6 (lower is better)
Translates to: NLPSAGWFAKEP*RHYESVSLFPM
Trigger: CATTGGGAAGAGTGAAACAGATTCATAATGACGTCAAGGTTCTTTTGCGAACCAACCAGCAGACGGCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS TCA 72 bp CAATCTGAAACTGAAGCATTTCTAGGCGCCTGTCTGTaGATTCGAACAGAGCCAGGGTTGTCTTCATCATGT +
Preference number: 6 (lower is better)
Translates to: QSETEAFLGACL*IRTEPGLSSSC
Trigger: ACATGATGAAGACAACCCTGGCTCTGTTCGAATTCACAGACAGGCGCCTAGAAATGCTTCAGTTTCAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 90 bp GCCTGTACATCTTCATTGATGCTTTCAAGCTCCTCCTTCACGTCTTaGAAGATGTTTACAAACTCCTCATTGATGGCTAAGCTTCTGCGT +
Preference number: 6 (lower is better)
Translates to: ACTSSLMLSSSSFTS*KMFTNSSLMAKLLR
Trigger: ACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAACATCTTCAAAGACGTGAAGGAGGAGCTTGAAAGCATCAATGAAGATGTACAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 72 bp TCCTTCACGTCTTTGAAGATGTTTACAAACTCCTCATaGATGGCTAAGCTTCTGCGTTCAATATCACCACGT +
Preference number: 6 (lower is better)
Translates to: SFTSLKMFTNSS*MAKLLRSISPR
Trigger: ACGTGGTGATATTGAACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAACATCTTCAAAGACGTGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 90 bp TTACTATTAAATCTTGAGTCTGTTCTTTTGCTGCCTGTAAGCGACTaGTCATATCCTGACAACAGCTGCTCATGGCCTGTACATCTTCAT +
Preference number: 6 (lower is better)
Translates to: LLLNLESVLLLPVSD*SYPDNSCSWPVHLH
Trigger: ATGAAGATGTACAGGCCATGAGCAGCTGTTGTCAGGATATGACAAGTCGCTTACAGGCAGCAAAAGAACAGACTCAAGATTTAATAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 90 bp TCAAGCTCCTCCTTCACGTCTTTGAAGATGTTTACAAACTCCTCATaGATGGCTAAGCTTCTGCGTTCAATATCACCACGTAAATTTCTT +
Preference number: 6 (lower is better)
Translates to: SSSSFTSLKMFTNSS*MAKLLRSISPRKFL
Trigger: AAGAAATTTACGTGGTGATATTGAACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAACATCTTCAAAGACGTGAAGGAGGAGCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6
CDS CAA 72 bp TCTTCATTGATGCTTTCAAGCTCCTCCTTCACGTCTTaGAAGATGTTTACAAACTCCTCATTGATGGCTAAG +
Preference number: 6 (lower is better)
Translates to: SSLMLSSSSFTS*KMFTNSSLMAK
Trigger: CTTAGCCATCAATGAGGAGTTTGTAAACATCTTCAAAGACGTGAAGGAGGAGCTTGAAAGCATCAATGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036665.10
ENSMUST00000193432.6