Pregenerated sensors for COG6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027742Ensembl transcript IDs: ENSMUST00000036665.10, ENSMUST00000193432.6, ENSMUST00000195183.2
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGATGGGGTTGGAGGAAACAGACTGAGTGCACAATGTATGGCGATTaGCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGC | + |
Preference number: 1 (lower is better) Translates to: GWGWRKQTECTMYGD*PSWNRLKLSAQEAC Trigger: GCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTGCACTCAGTCTGTTTCCTCCAACCCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR GCA 90 bp | CACAATGTATGGCGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTaGACAGGAAGCCTGCTGAAGGGTCTTTCCCTCTCTTCCGACCTA | + |
Preference number: 1 (lower is better) Translates to: HNVWRLPVLEQAEAV*TGSLLKGLSLSSDL Trigger: TAGGTCGGAAGAGAGGGAAAGACCCTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR CCA 90 bp | AGTTGCTTCTGCTCTGAGTGCAAGACAGAGTTTCTAGGATGGGGTTaGAGGAAACAGACTGAGTGCACAATGTATGGCGATTGCCCGTCC | + |
Preference number: 1 (lower is better) Translates to: SCFCSECKTEFLGWG*RKQTECTMYGDCPS Trigger: GGACGGGCAATCGCCATACATTGTGCACTCAGTCTGTTTCCTCCAACCCCATCCTAGAAACTCTGTCTTGCACTCAGAGCAGAAGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR CCA 90 bp | TTCACGTTTCCTGTTCCTAAGCAGTCCTGGGTGTTCCTACAGTTCTaGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTC | + |
Preference number: 1 (lower is better) Translates to: FTFPVPKQSWVFLQF*MDSCLHVRRSQSSF Trigger: GAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTTAGGAACAGGAAACGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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3UTR CCA 90 bp | CAGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTaGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATTAGA | + |
Preference number: 1 (lower is better) Translates to: QPECFSPHQTHQHLF*DQKHGLGSRSYSIR Trigger: TCTAATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR-3UTR TCA 90 bp | ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTACGTCCTGGAACAGGCTaGAGCTGTCTGCACAGGAAG | + |
Preference number: 2 (lower is better) Translates to: TTAPHPSGICLLCCTSFLRPGTG*SCLHRK Trigger: CTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACG...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR-3UTR GCA 90 bp | CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAACACCCTTGGTGTCATTaGCAGGCAGCAATTATCTGC | + |
Preference number: 2 (lower is better) Translates to: QLEESSGTFHKRTLIANKHPWCH*QAAIIC Trigger: GCAGATAATTGCTGCCTGGCAATGACACCAAGGGTG...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR-3UTR TCA 90 bp | CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCACCCGAAACTCCCAGCTaGCTTTATGCCTCTATTTAT | + |
Preference number: 2 (lower is better) Translates to: PHQTHQHLFWDQKHGLGSPETPS*LYASIY Trigger: ATAAATAGAGGCATAAAGTCAGCTGGGAGTTTCGGG...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR-3UTR CCA 90 bp | CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCATTGCCAATAAAGCTGTaGTTTAGATGTTACACAGAA | + |
Preference number: 2 (lower is better) Translates to: PHQTHQHLFWDQKHGLGSLPIKL*FRCYTE Trigger: TTCTGTGTAACATCTAAACCACAGCTTTATTGGCAA...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR-3UTR CCA 90 bp | CGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAACGCATCAACACCTATTTTaGGATCAGAAACATGGGCTA | + |
Preference number: 2 (lower is better) Translates to: RDLSPLLYFLSISILSKTHQHLF*DQKHGL Trigger: TAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATG...CGTTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR-3UTR GCA 90 bp | AGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAAAAATACATACAAACCTaGACCAGGCATGAAAGTAAG | + |
Preference number: 2 (lower is better) Translates to: SGICLLCCTSFLSVFFPKKYIQT*TRHESK Trigger: CTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTT...TTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCT 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR GCA 72 bp | TGGCGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTaGACAGGAAGCCTGCTGAAGGGTCTTTCCCTCTCT | + |
Preference number: 3 (lower is better) Translates to: WRLPVLEQAEAV*TGSLLKGLSLS Trigger: AGAGAGGGAAAGACCCTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR TCA 72 bp | GCACAATGTATGGCGATTGCCCGTCCTGGAACAGGCTaGAGCTGTCTGCACAGGAAGCCTGCTGAAGGGTCT | + |
Preference number: 3 (lower is better) Translates to: AQCMAIARPGTG*SCLHRKPAEGS Trigger: AGACCCTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR CCA 72 bp | CAGACTGAGTGCACAATGTATGGCGATTGCCCGTCCTaGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGC | + |
Preference number: 3 (lower is better) Translates to: QTECTMYGDCPS*NRLKLSAQEAC Trigger: GCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTGCACTCAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR TCA 72 bp | TGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTaGAGGGTCTTTCCCTCTCTTCCGACCTATCAGCTA | + |
Preference number: 3 (lower is better) Translates to: WNRLKLSAQEAC*RVFPSLPTYQL Trigger: TAGCTGATAGGTCGGAAGAGAGGGAAAGACCCTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR GCA 72 bp | TGGAGGAAACAGACTGAGTGCACAATGTATGGCGATTaGCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAG | + |
Preference number: 3 (lower is better) Translates to: WRKQTECTMYGD*PSWNRLKLSAQ Trigger: CTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCGCCATACATTGTGCACTCAGTCTGTTTCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR CCA 72 bp | CCTGTTCCTAAGCAGTCCTGGGTGTTCCTACAGTTCTaGATGGACTCATGTCTTCATGTACGACGCTCCCAG | + |
Preference number: 3 (lower is better) Translates to: PVPKQSWVFLQF*MDSCLHVRRSQ Trigger: CTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTTAGGAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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3UTR TCA 72 bp | GACAGAGTTTCTAGGATGGGGTTGGAGGAAACAGACTaGGTGCACAATGTATGGCGATTGCCCGTCCTGGAA | + |
Preference number: 3 (lower is better) Translates to: DRVSRMGLEETD*VHNVWRLPVLE Trigger: TTCCAGGACGGGCAATCGCCATACATTGTGCACTCAGTCTGTTTCCTCCAACCCCATCCTAGAAACTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR CCA 72 bp | TGCTTCTGCTCTGAGTGCAAGACAGAGTTTCTAGGATaGGGTTGGAGGAAACAGACTGAGTGCACAATGTAT | + |
Preference number: 3 (lower is better) Translates to: CFCSECKTEFLG*GWRKQTECTMY Trigger: ATACATTGTGCACTCAGTCTGTTTCCTCCAACCCCATCCTAGAAACTCTGTCTTGCACTCAGAGCAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR CCA 72 bp | CCTTCCATAAGCGGACGCTCATTGCCAATAAAGCTGTaGTTTAGATGTTACACAGAACTTACAAGTCATCGT | + |
Preference number: 3 (lower is better) Translates to: PSISGRSLPIKL*FRCYTELTSHR Trigger: ACGATGACTTGTAAGTTCTGTGTAACATCTAAACCACAGCTTTATTGGCAATGAGCGTCCGCTTATGGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR-3UTR CAA 90 bp | TATGCTGTTTTGATAAATACACCATATAAATTCATTGAACTGACCAACCCGGCACCACCCTTGGTGTCATaGCCAGGCAGCAATTATCTG | + |
Preference number: 3 (lower is better) Translates to: YAVLINTPYKFIELTNPAPPLVS*PGSNYL Trigger: CAGATAATTGCTGCCTGGCAATGACACCAAGGGTGG...TGCCGGGTTGGTCAGTTCAATGAATTTATATGGTGTATTTATCAAAACAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR-3UTR CAA 90 bp | CTATTTAAATACATACAAACCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAATGGGCAAGAGAACATaGCTCCCTACAGATTCAAGT | + |
Preference number: 3 (lower is better) Translates to: LFKYIQTCTRHESKQEGTMGKRT*LPTDSS Trigger: ACTTGAATCTGTAGGGAGCAATGTTCTCTTGCCCAT...TGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR-3UTR CAA 90 bp | AGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAACCATCAACACCTATTTaGGGATCAGAAACATGGGCT | + |
Preference number: 3 (lower is better) Translates to: SGICLLCCTSFLSVFFPKPSTPI*GSETWA Trigger: AGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGG...TTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR TCA 72 bp | TTACAAGTCATCGTACTTAATCCCGAAACTCCCAGCTaGCTTTATGCCTCTATTTATAATCCCAAATCACGG | + |
Preference number: 3 (lower is better) Translates to: LQVIVLNPETPS*LYASIYNPKSR Trigger: CCGTGATTTGGGATTATAAATAGAGGCATAAAGTCAGCTGGGAGTTTCGGGATTAAGTACGATGACTTGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR GCA 72 bp | CTATCAGCTAAGTGTCTATTTAAATACATACAAACCTaGACCAGGCATGAAAGTAAGCAGGAAGGGACAACA | + |
Preference number: 3 (lower is better) Translates to: LSAKCLFKYIQT*TRHESKQEGTT Trigger: TGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAGACACTTAGCTGATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR TCA 72 bp | AAGAGAACATTGCTCCCTACAGATTCAAGTCAATATTaGTTTACCTCCATGTTAGCTGAGAATGAAAGAAAT | + |
Preference number: 3 (lower is better) Translates to: KRTLLPTDSSQY*FTSMLAENERN Trigger: ATTTCTTTCATTCTCAGCTAACATGGAGGTAAATCAATATTGACTTGAATCTGTAGGGAGCAATGTTCTCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGAGCGGATTGTTGGGCTaGGCGGGGGTCGCACCTGCC | + |
Preference number: 4 (lower is better) Translates to: RLPVLEQAEAVCTGSLLKSGLLG*AGVAPA Trigger: GGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCT...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGCCTAGGTGTACCTCCTaGCCCTCCTCTTGTAAGAGC | + |
Preference number: 4 (lower is better) Translates to: RLPVLEQAEAVCTGSLLKPRCTS*PSSCKS Trigger: GCTCTTACAAGAGGAGGGCCAGGAGGTACACCTAGG...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCGAGGTGGTCTGGGGCTaGGAGGTAGCGGTCAAACTG | + |
Preference number: 4 (lower is better) Translates to: AIQLEESSGTFHKRTLIAEVVWG*EVAVKL Trigger: CAGTTTGACCGCTACCTCTCAGCCCCAGACCACCTC...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | CTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAAAGACAGGCCTGTCCTaGAGGGCTTCCATGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: LGVPTVLDGLMSSCTTLPKTGLS*RASMAW Trigger: CCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTT...TGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR TCA 90 bp | ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTAAGCAAAGTGAGGGTCTaGCTCAGGGCAGAGCTGGGT | + |
Preference number: 4 (lower is better) Translates to: TTAPHPSGICLLCCTSFLSKVRV*LRAELG Trigger: ACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTGCT...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | GAGTTCAAGATTAGCATGGTATTTAGTGTGAGCTCAGGACTCCAACAACCCATCAGCGGATTGTTGGGCTaGGCGGGGGTCGCACCTGCC | + |
Preference number: 4 (lower is better) Translates to: EFKISMVFSVSSGLQQPISGLLG*AGVAPA Trigger: GGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCT...GATGGGTTGTTGGAGTCCTGAGCTCACACTAAATACCATGCTAATCTTGAACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR TCA 90 bp | TCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTGAGGTGGTCTGGGGCTaGGAGGTAGCGGTCAAACTG | + |
Preference number: 4 (lower is better) Translates to: SCLHVRRSQSSFKAVSSAEVVWG*EVAVKL Trigger: CAGTTTGACCGCTACCTCTCAGCCCCAGACCACCTC...AGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CCA 90 bp | ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTAAGGGCTTCCATGGCCTaGGATAACACCGCAGACACA | + |
Preference number: 4 (lower is better) Translates to: TTAPHPSGICLLCCTSFLRASMA*DNTADT Trigger: TGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCT...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | TACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAGGGTCCGAGGTCAGGTaGTGGGAGCTCAACCTTGTC | + |
Preference number: 4 (lower is better) Translates to: YSSGWTHVFMYDAPSHPSGSEVR*WELNLV Trigger: GACAAGGTTGAGCTCCCACCACCTGACCTCGGACCC...TGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CCA 90 bp | CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGTTTGTATGCGTTGTCTaGATTCATCACGGCTGCATG | + |
Preference number: 4 (lower is better) Translates to: RLPVLEQAEAVCTGSLLKFVCVV*IHHGCM Trigger: CATGCAGCCGTGATGAATCCAGACAACGCATACAAA...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | GTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGTGCGACTTGTCATATCCTaGCAACAGCTGCTCATGGCC | + |
Preference number: 4 (lower is better) Translates to: VRRSQSSFKAVSSARKSVRLVIS*QQLLMA Trigger: GGCCATGAGCAGCTGTTGTCAGGATATGACAAGTCG...CACTGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR TCA 90 bp | GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCGACACACACCCTCGGTaGTATGCCCAACGACTTCTT | + |
Preference number: 4 (lower is better) Translates to: AIQLEESSGTFHKRTLIADTHPR*YAQRLL Trigger: AAGAAGTCGTTGGGCATATCACCGAGGGTGTGTGTC...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | GACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTAGCAAAGTGAGGGTCTaGCTCAGGGCAGAGCTGGGT | + |
Preference number: 4 (lower is better) Translates to: DSCLHVRRSQSSFKAVSSSKVRV*LRAELG Trigger: ACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTGCT...AGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR GCA 90 bp | CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGA | + |
Preference number: 4 (lower is better) Translates to: PAPGMKVSRKGQQPECFSVSRIL*SLRDSG Trigger: TCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGAC...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGA | + |
Preference number: 4 (lower is better) Translates to: HVRRSQSSFKAVSSARKSVSRIL*SLRDSG Trigger: TCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGAC...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR GCA 90 bp | CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGGTGACCTATGAAGGATaGTCTCTGGATCTTTGTATG | + |
Preference number: 4 (lower is better) Translates to: RLPVLEQAEAVCTGSLLKVTYEG*SLDLCM Trigger: CATACAAAGATCCAGAGAGCATCCTTCATAGGTCAC...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | AGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTAGGGCTTCCATGGCCTaGGATAACACCGCAGACACA | + |
Preference number: 4 (lower is better) Translates to: SPGCSYSSGWTHVFMYDARASMA*DNTADT Trigger: TGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCT...AGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR TCA 90 bp | AGCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACACATCACAGGACTCTTaGGTCAGTGCTCTGCACTCG | + |
Preference number: 4 (lower is better) Translates to: SSPGCSYSSGWTHVFMYDTSQDS*VSALHS Trigger: CGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGT...GTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR TCA 90 bp | CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTCCTTCACTGTGGCACTaGGAAGGGAATTCAGCTGTG | + |
Preference number: 4 (lower is better) Translates to: PAPGMKVSRKGQQPECFSPSLWH*EGNSAV Trigger: CACAGCTGAATTCCCTTCTCAGTGCCACAGTGAAGG...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCTGCTCAGGTGACCTATaGAGGATGCTCTCTGGATCT | + |
Preference number: 4 (lower is better) Translates to: AIQLEESSGTFHKRTLIACSGDL*RMLSGS Trigger: AGATCCAGAGAGCATCCTTCATAGGTCACCTGAGCA...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | TACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAACCCACGAACAACAGTaGTTCGTCGGGCCGTTCCAA | + |
Preference number: 4 (lower is better) Translates to: YSSGWTHVFMYDAPSHPSTHEQQ*FVGPFQ Trigger: TTGGAACGGCCCGACGAAGCACTGTTGTTCGTGGGT...TGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR GCA 90 bp | GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAGCTTGATGGAGCCATaGCAGCATGTCTCCCACATA | + |
Preference number: 4 (lower is better) Translates to: AIQLEESSGTFHKRTLIASLMEP*QHVSHI Trigger: TATGTGGGAGACATGCTGGCATGGCTCCATCAAGCT...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | TTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCACCTAGGTGTACCTCCTaGCCCTCCTCTTGTAAGAGC | + |
Preference number: 4 (lower is better) Translates to: FWMDSCLHVRRSQSSFKAPRCTS*PSSCKS Trigger: GCTCTTACAAGAGGAGGGCCAGGAGGTACACCTAGG...TGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
||
CDS-3UTR TCA 90 bp | AAGCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGAGACACACACCCTCGGTaGTATGCCCAACGACTTCTT | + |
Preference number: 4 (lower is better) Translates to: KQSWVFLQFWMDSCLHVRDTHPR*YAQRLL Trigger: AAGAAGTCGTTGGGCATATCACCGAGGGTGTGTGTC...TCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
||
CDS-3UTR TCA 90 bp | CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAACTTCACCTGCTCAGGTaGCCTATGAAGGATGCTCTC | + |
Preference number: 4 (lower is better) Translates to: QLEESSGTFHKRTLIANKLHLLR*PMKDAL Trigger: GAGAGCATCCTTCATAGGTCACCTGAGCAGGTGAAG...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
||
CDS-3UTR GCA 90 bp | ACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAGCACAGGACAAAACCTaGACAAAGTCAGCCTGCCGA | + |
Preference number: 4 (lower is better) Translates to: TVLDGLMSSCTTLPVILQAQDKT*TKSACR Trigger: TCGGCAGGCTGACTTTGTGCAGGTTTTGTCCTGTGC...TTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
||
CDS-3UTR CCA 90 bp | ACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAATACCTCAGCGGGTCATaGGAGTGCATTTCAATGGGC | + |
Preference number: 4 (lower is better) Translates to: TVLDGLMSSCTTLPVILQYLSGS*ECISMG Trigger: GCCCATTGAAATGCACTCCCATGACCCGCTGAGGTA...TTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
||
CDS-3UTR CCA 90 bp | GCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCCAGGTTGGGCATATTaGCTAAAGAACCCTGATCAG | + |
Preference number: 4 (lower is better) Translates to: AVLGVPTVLDGLMSSCTTPGWAY*LKNPDQ Trigger: CTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGG...CGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
||
CDS-3UTR TCA 90 bp | AGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCTTCATCATGTACAGTaGGTTGACCATGAACGTGGC | + |
Preference number: 4 (lower is better) Translates to: SPGCSYSSGWTHVFMYDALHHVQ*VDHERG Trigger: GCCACGTTCATGGTCAACTCACTGTACATGATGAAG...AGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
||
CDS-3UTR GCA 90 bp | TGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATAGCTTGATGGAGCCATaGCAGCATGTCTCCCACATA | + |
Preference number: 4 (lower is better) Translates to: CSYSSGWTHVFMYDAPSHSLMEP*QHVSHI Trigger: TATGTGGGAGACATGCTGGCATGGCTCCATCAAGCT...ATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
||
CDS-3UTR GCA 90 bp | AGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCAGCTGTGCCTAAATTaGTGGCTGACACTGTACACA | + |
Preference number: 4 (lower is better) Translates to: SPGCSYSSGWTHVFMYDAQLCLN*WLTLYT Trigger: TGTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTG...AGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
||
CDS-3UTR GCA 90 bp | AAGCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGATGGCCATGTCAGCTGTaGCTAAATTGCTGGCTGACA | + |
Preference number: 4 (lower is better) Translates to: KQSWVFLQFWMDSCLHVRWPCQL*LNCWLT Trigger: TGTCAGCCAGCAATTTAGGCACAGCTGACATGGCCA...TCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR GCA 90 bp | GAGTTCAAGATTAGCATGGTATTTAGTGTGAGCTCAGGACTCCAACAACCCATCGTCAAACTGAGCCATTaGAGCCTTCAGCGCCACAGC | + |
Preference number: 4 (lower is better) Translates to: EFKISMVFSVSSGLQQPIVKLSH*SLQRHS Trigger: GCTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGAC...GATGGGTTGTTGGAGTCCTGAGCTCACACTAAATACCATGCTAATCTTGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
||
CDS-3UTR GCA 90 bp | AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGATGGATTCATCACGGCTaGATGCACTTCCGCGTAGGC | + |
Preference number: 4 (lower is better) Translates to: SLNVSLPIKPINTYFGIRWIHHG*MHFRVG Trigger: GCCTACGCGGAAGTGCATGCAGCCGTGATGAATCCA...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
||
CDS-3UTR CCA 90 bp | CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCATACCTCAGCGGGTCATaGGAGTGCATTTCAATGGGC | + |
Preference number: 4 (lower is better) Translates to: PHQTHQHLFWDQKHGLGSYLSGS*ECISMG Trigger: GCCCATTGAAATGCACTCCCATGACCCGCTGAGGTA...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | TCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATAAGACAGGCCTGTCCTaGAGGGCTTCCATGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: STPILGSETWARFKKLFNKTGLS*RASMAW Trigger: CCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTT...ATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | CGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAACGGTCAAACTGAGCCATTaGAGCCTTCAGCGCCACAGC | + |
Preference number: 4 (lower is better) Translates to: RDLSPLLYFLSISILSKTVKLSH*SLQRHS Trigger: GCTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGAC...CGTTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | GACCTATCAGCTAAGTGTCTATTTAAATACATACAAACCTGCACCAGGCATGAACCTGCAGGGCTTCCATaGCCTGGGATAACACCGCAG | + |
Preference number: 4 (lower is better) Translates to: DLSAKCLFKYIQTCTRHEPAGLP*PGITPQ Trigger: CTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGG...TTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAGACACTTAGCTGATAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
||
CDS-3UTR CCA 90 bp | GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAAGGGTCCGAGGTCAGGTaGTGGGAGCTCAACCTTGTC | + |
Preference number: 4 (lower is better) Translates to: GLSLSSDLSAKCLFKYIQGSEVR*WELNLV Trigger: GACAAGGTTGAGCTCCCACCACCTGACCTCGGACCC...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCACTGTGCCTAAATTGCTaGCTGACACTGTACACATCT | + |
Preference number: 4 (lower is better) Translates to: HVRRSQSSFKAVSSARKSLCLNC*LTLYTS Trigger: AGATGTGTACAGTGTCAGCCAGCAATTTAGGCACAG...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR TCA 90 bp | CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAACCTGTACATCTTCATTaGTGCTTTCAAGCTCCTCCT | + |
Preference number: 4 (lower is better) Translates to: QLEESSGTFHKRTLIANKPVHLH*CFQAPP Trigger: AGGAGGAGCTTGAAAGCATCAATGAAGATGTACAGG...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | TGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTGTACATCTTCATTaGTGCTTTCAAGCTCCTCCT | + |
Preference number: 4 (lower is better) Translates to: CSYSSGWTHVFMYDAPSHPVHLH*CFQAPP Trigger: AGGAGGAGCTTGAAAGCATCAATGAAGATGTACAGG...ATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR GCA 90 bp | GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCTTTCACTCTTCCCAATaGCTTGAAAAAGTCCTCAGT | + |
Preference number: 4 (lower is better) Translates to: AIQLEESSGTFHKRTLIAFHSSQ*LEKVLS Trigger: ACTGAGGACTTTTTCAAGGCATTGGGAAGAGTGAAA...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCACAGCTGTGCCTAAATTaGTGGCTGACACTGTACACA | + |
Preference number: 4 (lower is better) Translates to: PHQTHQHLFWDQKHGLGSQLCLN*WLTLYT Trigger: TGTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTG...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTACGAGCTCTGTAGACTaGTTTATAATCTGCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: PAPGMKVSRKGQQPECFSTSSVD*FIICSF Trigger: GAAGGAGCAGATTATAAAGCAGTCTACAGAGCTCGT...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTCTCTGGATCTTTGTATaGGTTGTCTGGATTCATCAC | + |
Preference number: 4 (lower is better) Translates to: PAPGMKVSRKGQQPECFSLWIFV*VVWIHH Trigger: GTGATGAATCCAGACAACGCATACAAAGATCCAGAG...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | CTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCACTAATCTCTAGTCTTTaGTTTTCCGCTTGCAGCTTA | + |
Preference number: 4 (lower is better) Translates to: LGVPTVLDGLMSSCTTLPLISSL*FSACSL Trigger: TAAGCTGCAAGCGGAAAACCAAAGACTAGAGATTAG...TGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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3UTR CAA 72 bp | AGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATaGCCAATAAAGCTGTGGTTTAGATGTTACACAGAA | + |
Preference number: 4 (lower is better) Translates to: RKAAGPSISGRS*PIKLWFRCYTE Trigger: TTCTGTGTAACATCTAAACCACAGCTTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAAACCTTGACGTCATTATaGATCTGTTTCACTCTTCCC | + |
Preference number: 4 (lower is better) Translates to: QLEESSGTFHKRTLIANKTLTSL*ICFTLP Trigger: GGGAAGAGTGAAACAGATTCATAATGACGTCAAGGT...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | CTATTTAAATACATACAAACCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACATCACAGGACTCTTaGGTCAGTGCTCTGCACTCG | + |
Preference number: 4 (lower is better) Translates to: LFKYIQTCTRHESKQEGTTSQDS*VSALHS Trigger: CGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGT...TGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCTTTTCTTTAACACCCTaGGCAGTTACATGCTTTAAG | + |
Preference number: 4 (lower is better) Translates to: AIQLEESSGTFHKRTLIAFSLTP*AVTCFK Trigger: CTTAAAGCATGTAACTGCTCAGGGTGTTAAAGAAAA...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAACTTTGGTTTTCCGCTTaGAGCTTAGTGGTCTTTACT | + |
Preference number: 4 (lower is better) Translates to: QLEESSGTFHKRTLIANKLWFSA*SLVVFT Trigger: AGTAAAGACCACTAAGCTGCAAGCGGAAAACCAAAG...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | GTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGTGTTTTTGCTTAGCAGGTaGATTTCCTCAATTGTTGTC | + |
Preference number: 4 (lower is better) Translates to: VRRSQSSFKAVSSARKSVFLLSR*ISSIVV Trigger: GACAACAATTGAGGAAATGCACCTGCTAAGCAAAAA...CACTGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CCA 90 bp | TCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTGCCCAACGACTTCTTaGATATTTTCTTTAACACCC | + |
Preference number: 4 (lower is better) Translates to: SYSSGWTHVFMYDAPSHPCPTTS*IFSLTP Trigger: GGGTGTTAAAGAAAATATCCAAGAAGTCGTTGGGCA...AGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR TCA 90 bp | GACCTATCAGCTAAGTGTCTATTTAAATACATACAAACCTGCACCAGGCATGAACGACTTGTCATATCCTaGCAACAGCTGCTCATGGCC | + |
Preference number: 4 (lower is better) Translates to: DLSAKCLFKYIQTCTRHERLVIS*QQLLMA Trigger: GGCCATGAGCAGCTGTTGTCAGGATATGACAAGTCG...TTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAGACACTTAGCTGATAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | CTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTTTCGCAAAAGAACCTTaGCGTCATTATGAATCTGTT | + |
Preference number: 4 (lower is better) Translates to: LDGLMSSCTTLPVILQSSFAKEP*RHYESV Trigger: AACAGATTCATAATGACGTCAAGGTTCTTTTGCGAA...ACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR GCA 90 bp | ACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAATTTCACTCTTCCCAATaGCTTGAAAAAGTCCTCAGT | + |
Preference number: 4 (lower is better) Translates to: TVLDGLMSSCTTLPVILQFHSSQ*LEKVLS Trigger: ACTGAGGACTTTTTCAAGGCATTGGGAAGAGTGAAA...TTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR GCA 90 bp | GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAAGCACAGGACAAAACCTaGACAAAGTCAGCCTGCCGA | + |
Preference number: 4 (lower is better) Translates to: GLSLSSDLSAKCLFKYIQAQDKT*TKSACR Trigger: TCGGCAGGCTGACTTTGTGCAGGTTTTGTCCTGTGC...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGAGACTGCTTTATAATCTaGTCCTTCACTGTGGCACTG | + |
Preference number: 4 (lower is better) Translates to: SLNVSLPIKPINTYFGIRDCFII*SFTVAL Trigger: CAGTGCCACAGTGAAGGAGCAGATTATAAAGCAGTC...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | CGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAACGCCAGGTTGGGCATATTaGCTAAAGAACCCTGATCAG | + |
Preference number: 4 (lower is better) Translates to: RDLSPLLYFLSISILSKTPGWAY*LKNPDQ Trigger: CTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGG...CGTTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | CAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCAATAAATTCGCAAAAGAACCTTaGCGTCATTATGAATCTGTT | + |
Preference number: 4 (lower is better) Translates to: QLEESSGTFHKRTLIANKFAKEP*RHYESV Trigger: AACAGATTCATAATGACGTCAAGGTTCTTTTGCGAA...TTTATTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | TATGCTGTTTTGATAAATACACCATATAAATTCATTGAACTGACCAACCCGGCAACCCACGAACAACAGTaGTTCGTCGGGCCGTTCCAA | + |
Preference number: 4 (lower is better) Translates to: YAVLINTPYKFIELTNPATHEQQ*FVGPFQ Trigger: TTGGAACGGCCCGACGAAGCACTGTTGTTCGTGGGT...TGCCGGGTTGGTCAGTTCAATGAATTTATATGGTGTATTTATCAAAACAGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR GCA 90 bp | GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAATGGCCATGTCAGCTGTaGCTAAATTGCTGGCTGACA | + |
Preference number: 4 (lower is better) Translates to: GLSLSSDLSAKCLFKYIQWPCQL*LNCWLT Trigger: TGTCAGCCAGCAATTTAGGCACAGCTGACATGGCCA...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCATGCCCAACGACTTCTTaGATATTTTCTTTAACACCC | + |
Preference number: 4 (lower is better) Translates to: PHQTHQHLFWDQKHGLGSCPTTS*IFSLTP Trigger: GGGTGTTAAAGAAAATATCCAAGAAGTCGTTGGGCA...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGAATGAAGGATGCTCTCTaGATCTTTGTATGCGTTGTC | + |
Preference number: 4 (lower is better) Translates to: SLNVSLPIKPINTYFGIRMKDAL*IFVCVV Trigger: GACAACGCATACAAAGATCCAGAGAGCATCCTTCAT...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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3UTR CAA 72 bp | ATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTaGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTA | + |
Preference number: 4 (lower is better) Translates to: MFLSPSNPSTPI*GSETWARFKKL Trigger: TAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR TCA 90 bp | TCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATCTTCATCATGTACAGTaGGTTGACCATGAACGTGGC | + |
Preference number: 4 (lower is better) Translates to: STPILGSETWARFKKLFNLHHVQ*VDHERG Trigger: GCCACGTTCATGGTCAACTCACTGTACATGATGAAG...ATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGACTAATCTCTAGTCTTTaGTTTTCCGCTTGCAGCTTA | + |
Preference number: 4 (lower is better) Translates to: SLNVSLPIKPINTYFGIRLISSL*FSACSL Trigger: TAAGCTGCAAGCGGAAAACCAAAGACTAGAGATTAG...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
||
CDS-3UTR TCA 90 bp | GAGTTCAAGATTAGCATGGTATTTAGTGTGAGCTCAGGACTCCAACAACCCATCTTTTCTTTAACACCCTaGGCAGTTACATGCTTTAAG | + |
Preference number: 4 (lower is better) Translates to: EFKISMVFSVSSGLQQPIFSLTP*AVTCFK Trigger: CTTAAAGCATGTAACTGCTCAGGGTGTTAAAGAAAA...GATGGGTTGTTGGAGTCCTGAGCTCACACTAAATACCATGCTAATCTTGAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR GCA 90 bp | AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGATTTTTGCTTAGCAGGTaGATTTCCTCAATTGTTGTC | + |
Preference number: 4 (lower is better) Translates to: SLNVSLPIKPINTYFGIRFLLSR*ISSIVV Trigger: GACAACAATTGAGGAAATGCACCTGCTAAGCAAAAA...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CCA 90 bp | TCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATCTGTGCCTAAATTGCTaGCTGACACTGTACACATCT | + |
Preference number: 4 (lower is better) Translates to: STPILGSETWARFKKLFNLCLNC*LTLYTS Trigger: AGATGTGTACAGTGTCAGCCAGCAATTTAGGCACAG...ATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS GCA 90 bp | GTCTCCAGGATCTTGTGCAGCTTACGCGACAGCGGATTGTTGGGCTaGGCGGGGGTCGCACCTGCCCCATTACTGAAGCCATTGGCGGCC | + |
Preference number: 5 (lower is better) Translates to: VSRILCSLRDSGLLG*AGVAPAPLLKPLAA Trigger: GGCCGCCAATGGCTTCAGTAATGGGGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 ENSMUST00000195183.2 |
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CDS-3UTR CAA 90 bp | GTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCATTACTGAAGCCATaGGCGGCCCCGGAGGCGGGG | + |
Preference number: 5 (lower is better) Translates to: VLGVPTVLDGLMSSCTTLPLLKP*AAPEAG Trigger: CCCCGCCTCCGGGGCCGCCAATGGCTTCAGTAATGG...GAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGTGCTCTGCACTCGCTTaGAGCCCACCGGTAAAGTCT | + |
Preference number: 5 (lower is better) Translates to: RLPVLEQAEAVCTGSLLKCSALA*SPPVKS Trigger: AGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCA...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS GCA 90 bp | TCCAACATCTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGATTGTTGGGCTGCGCGGGGGTCGCA | + |
Preference number: 5 (lower is better) Translates to: SNISLSFSSRVSRIL*SLRDSGLLGCAGVA Trigger: TGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAGATGTTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 90 bp | AGCCATGCCAGCATGTCTCCCACATACCTCAGCGGGTCATGGGAGTaGATTTCAATGGGCCTAGGTGTACCTCCTGGCCCTCCTCTTGTA | + |
Preference number: 5 (lower is better) Translates to: SHASMSPTYLSGSWE*ISMGLGVPPGPPLV Trigger: TACAAGAGGAGGGCCAGGAGGTACACCTAGGCCCATTGAAATGCACTCCCATGACCCGCTGAGGTATGTGGGAGACATGCTGGCATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 90 bp | TCCAGATGTTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGATTGTTGGGCTGCGCGGGGGTCGCA | + |
Preference number: 5 (lower is better) Translates to: SRCSLSFSSRVSRIL*SLRDSGLLGCAGVA Trigger: TGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAACATCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195183.2 |
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CDS-3UTR CAA 90 bp | CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGCACATCACAGGACTCTaGAGTCAGTGCTCTGCACTC | + |
Preference number: 5 (lower is better) Translates to: RLPVLEQAEAVCTGSLLKHITGL*SQCSAL Trigger: GAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTG...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS CCA 90 bp | AGTGAGGGTCTGACTCAGGGCAGAGCTGGGTCCGAGGTCAGGTGGTaGGAGCTCAACCTTGTCCATCAGTTTATTCGCATGGAGACTCAA | + |
Preference number: 5 (lower is better) Translates to: SEGLTQGRAGSEVRW*ELNLVHQFIRMETQ Trigger: TTGAGTCTCCATGCGAATAAACTGATGGACAAGGTTGAGCTCCCACCACCTGACCTCGGACCCAGCTCTGCCCTGAGTCAGACCCTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 90 bp | CAAAGTGAGGGTCTGACTCAGGGCAGAGCTGGGTCCGAGGTCAGGTaGTGGGAGCTCAACCTTGTCCATCAGTTTATTCGCATGGAGACT | + |
Preference number: 5 (lower is better) Translates to: QSEGLTQGRAGSEVR*WELNLVHQFIRMET Trigger: AGTCTCCATGCGAATAAACTGATGGACAAGGTTGAGCTCCCACCACCTGACCTCGGACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGGAAGTCAGCTGGAACTaGGCCAAAAAGGCATCCACA | + |
Preference number: 5 (lower is better) Translates to: RLPVLEQAEAVCTGSLLKEVSWN*AKKAST Trigger: TGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTC...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGGCCACAGCATCCAGGTaGGGCATATTGGCTAAAGAA | + |
Preference number: 5 (lower is better) Translates to: RLPVLEQAEAVCTGSLLKATASR*GILAKE Trigger: TTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGC...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTAGGTCAAACTGAGCCATaGCAGCCTTCAGCGCCACAG | + |
Preference number: 5 (lower is better) Translates to: TTAPHPSGICLLCCTSFLGQTEP*QPSAPQ Trigger: CTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGACC...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS TCA 90 bp | CAAAACCTGCACAAAGTCAGCCTGCCGAGCATCCAAGGGGATGACTaGAGAATCATGCGACGCCAGAATATCCCGCAGCAAAGTGAGGGT | + |
Preference number: 5 (lower is better) Translates to: QNLHKVSLPSIQGDD*RIMRRQNIPQQSEG Trigger: ACCCTCACTTTGCTGCGGGATATTCTGGCGTCGCATGATTCTTCAGTCATCCCCTTGGATGCTCGGCAGGCTGACTTTGTGCAGGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 90 bp | GATGCTCTCTGGATCTTTGTATGCGTTGTCTGGATTCATCACGGCTaGATGCACTTCCGCGTAGGCTCTGCAGACGAGCTCTGTAGACTG | + |
Preference number: 5 (lower is better) Translates to: DALWIFVCVVWIHHG*MHFRVGSADELCRL Trigger: CAGTCTACAGAGCTCGTCTGCAGAGCCTACGCGGAAGTGCATGCAGCCGTGATGAATCCAGACAACGCATACAAAGATCCAGAGAGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGC | + |
Preference number: 5 (lower is better) Translates to: PAPGMKVSRKGQQPECFSRVSRI*CSLRDS Trigger: GCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACG...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | CGATTGCCCGTCCTGGAACAGGCTGAAGCTGTCTGCACAGGAAGCCTGCTGAAGACTCTTCCCAATGCCTaGAAAAAGTCCTCAGTAACG | + |
Preference number: 5 (lower is better) Translates to: RLPVLEQAEAVCTGSLLKTLPNA*KKSSVT Trigger: CGTTACTGAGGACTTTTTCAAGGCATTGGGAAGAGT...CTTCAGCAGGCTTCCTGTGCAGACAGCTTCAGCCTGTTCCAGGACGGGCAATCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS TCA 90 bp | TGCTTTAAGAGAGCTTCCAGATGTTCCTTCTCAGAGGCAGTAGCTTaGTGGAGCCATGCCAGCATGTCTCCCACATACCTCAGCGGGTCA | + |
Preference number: 5 (lower is better) Translates to: CFKRASRCSFSEAVA*WSHASMSPTYLSGS Trigger: TGACCCGCTGAGGTATGTGGGAGACATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAGAAGGAACATCTGGAAGCTCTCTTAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 90 bp | CAGCGGGTCATGGGAGTGCATTTCAATGGGCCTAGGTGTACCTCCTaGCCCTCCTCTTGTAAGAGCATCAATAAACCCACGAACAACAGT | + |
Preference number: 5 (lower is better) Translates to: QRVMGVHFNGPRCTS*PSSCKSINKPTNNS Trigger: ACTGTTGTTCGTGGGTTTATTGATGCTCTTACAAGAGGAGGGCCAGGAGGTACACCTAGGCCCATTGAAATGCACTCCCATGACCCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | TTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCACGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGC | + |
Preference number: 5 (lower is better) Translates to: FWMDSCLHVRRSQSSFKARVSRI*CSLRDS Trigger: GCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACG...TGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | AGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTTGCTCTGCACTCGCTTaGAGCCCACCGGTAAAGTCT | + |
Preference number: 5 (lower is better) Translates to: SPGCSYSSGWTHVFMYDACSALA*SPPVKS Trigger: AGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCA...AGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | CTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCACACATCACAGGACTCTaGAGTCAGTGCTCTGCACTC | + |
Preference number: 5 (lower is better) Translates to: LGVPTVLDGLMSSCTTLPHITGL*SQCSAL Trigger: GAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTG...TGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | CTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTCTCAGAGGCAGTAGCTaGATGGAGCCATGCCAGCAT | + |
Preference number: 5 (lower is better) Translates to: LDGLMSSCTTLPVILQSSLRGSS*MEPCQH Trigger: ATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAG...ACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | TGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATGGTCAAACTGAGCCATaGCAGCCTTCAGCGCCACAG | + |
Preference number: 5 (lower is better) Translates to: CSYSSGWTHVFMYDAPSHGQTEP*QPSAPQ Trigger: CTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGACC...ATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS CCA 90 bp | CCTCCTCTTGTACCGCGGAGGAGACTCATTTCATCCGAAGTCAGCTaGAACTTGGCCAAAAAGGCATCCACAACCTGTGCTCTAATCTCT | + |
Preference number: 5 (lower is better) Translates to: PPLVPRRRLISSEVS*NLAKKASTTCALIS Trigger: AGAGATTAGAGCACAGGTTGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTCGGATGAAATGAGTCTCCTCCGCGGTACAAGAGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 90 bp | CTAAGGTATACTTGTATAAGACAGGCCTGTCCTGCAGGGCTTCCATaGCCTGGGATAACACCGCAGACACATCACAGGACTCTTGAGTCA | + |
Preference number: 5 (lower is better) Translates to: LRYTCIRQACPAGLP*PGITPQTHHRTLES Trigger: TGACTCAAGAGTCCTGTGATGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTTATACAAGTATACCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 90 bp | GGTCAAACTGAGCCATTGCAGCCTTCAGCGCCACAGCATCCAGGTTaGGCATATTGGCTAAAGAACCCTGATCAGGTCTATGTTGCTGTA | + |
Preference number: 5 (lower is better) Translates to: GQTEPLQPSAPQHPG*AYWLKNPDQVYVAV Trigger: TACAGCAACATAGACCTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGCGCTGAAGGCTGCAATGGCTCAGTTTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGCTGTGCCTAAATaGCTGGCTGACACTGTACAC | + |
Preference number: 5 (lower is better) Translates to: TTAPHPSGICLLCCTSFLSAVPK*LADTVH Trigger: GTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTGA...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS GCA 90 bp | GGGATAACACCGCAGACACATCACAGGACTCTTGAGTCAGTGCTCTaGACTCGCTTTGAGCCCACCGGTAAAGTCTTTCATAAGCAGTTT | + |
Preference number: 5 (lower is better) Translates to: GITPQTHHRTLESVL*TRFEPTGKVFHKQF Trigger: AAACTGCTTATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTGTCTGCGGTGTTATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | TCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAAGGCTGAAAGGGCCTaGAGAGCTTCCAACATCTCC | + |
Preference number: 5 (lower is better) Translates to: SCLHVRRSQSSFKAVSSAKAERA*RASNIS Trigger: GGAGATGTTGGAAGCTCTCAAGGCCCTTTCAGCCTT...AGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | GCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTTGAGTCTGTTCTTTaGCTGCCTGTAAGCGACTTG | + |
Preference number: 5 (lower is better) Translates to: AVLGVPTVLDGLMSSCTTLESVL*LPVSDL Trigger: CAAGTCGCTTACAGGCAGCAAAAGAACAGACTCAAG...CGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGAAGTCAGCTGGAACTaGGCCAAAAAGGCATCCACA | + |
Preference number: 5 (lower is better) Translates to: HVRRSQSSFKAVSSARKSEVSWN*AKKAST Trigger: TGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTC...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCAGCCACAGCATCCAGGTaGGGCATATTGGCTAAAGAA | + |
Preference number: 5 (lower is better) Translates to: HVRRSQSSFKAVSSARKSATASR*GILAKE Trigger: TTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGC...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | ACTACCGCACCACATCCCAGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTAGGATCTTTGTATGCGTaGTCTGGATTCATCACGGCT | + |
Preference number: 5 (lower is better) Translates to: TTAPHPSGICLLCCTSFLGSLYA*SGFITA Trigger: AGCCGTGATGAATCCAGACAACGCATACAAAGATCC...TAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCTGGGATGTGGTGCGGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS GCA 90 bp | GTTCCAAATTCATCTAAGGTATACTTGTATAAGACAGGCCTGTCCTaGAGGGCTTCCATGGCCTGGGATAACACCGCAGACACATCACAG | + |
Preference number: 5 (lower is better) Translates to: VPNSSKVYLYKTGLS*RASMAWDNTADTSQ Trigger: CTGTGATGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTTATACAAGTATACCTTAGATGAATTTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | TATGCTGTTTTGATAAATACACCATATAAATTCATTGAACTGACCAACCCGGCACCATTACTGAAGCCATaGGCGGCCCCGGAGGCGGGG | + |
Preference number: 5 (lower is better) Translates to: YAVLINTPYKFIELTNPAPLLKP*AAPEAG Trigger: CCCCGCCTCCGGGGCCGCCAATGGCTTCAGTAATGG...TGCCGGGTTGGTCAGTTCAATGAATTTATATGGTGTATTTATCAAAACAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTGCTTCCAACATCTCCTaGTCATTTTCTAGCCGTGTC | + |
Preference number: 5 (lower is better) Translates to: PAPGMKVSRKGQQPECFSASNIS*SFSSRV Trigger: GACACGGCTAGAAAATGACAAGGAGATGTTGGAAGC...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | GACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTTCAGCTGTGCCTAAATaGCTGGCTGACACTGTACAC | + |
Preference number: 5 (lower is better) Translates to: DSCLHVRRSQSSFKAVSSSAVPK*LADTVH Trigger: GTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTGA...AGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | TGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTACGACGCTCCCAGTCATGCCTGTACATCTTCATaGATGCTTTCAAGCTCCTCC | + |
Preference number: 5 (lower is better) Translates to: CSYSSGWTHVFMYDAPSHACTSS*MLSSSS Trigger: GGAGGAGCTTGAAAGCATCAATGAAGATGTACAGGC...ATGACTGGGAGCGTCGTACATGAAGACATGAGTCCATCCAGAACTGTAGGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS TCA 90 bp | GATGGGCTTCAATCTGAAACTGAAGCATTTCTAGGCGCCTGTCTGTaGATTCGAACAGAGCCAGGGTTGTCTTCATCATGTACAGTGAGT | + |
Preference number: 5 (lower is better) Translates to: DGLQSETEAFLGACL*IRTEPGLSSSCTVS Trigger: ACTCACTGTACATGATGAAGACAACCCTGGCTCTGTTCGAATTCACAGACAGGCGCCTAGAAATGCTTCAGTTTCAGATTGAAGCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 90 bp | AGCAGTTTCTTGAAGCAAGGCCATCTGTTCCATAATCTCCAAACCTaGCGTCTGCTGGTTGGTTCGCAAAAGAACCTTGACGTCATTATG | + |
Preference number: 5 (lower is better) Translates to: SSFLKQGHLFHNLQT*RLLVGSQKNLDVIM Trigger: CATAATGACGTCAAGGTTCTTTTGCGAACCAACCAGCAGACGGCAGGTTTGGAGATTATGGAACAGATGGCCTTGCTTCAAGAAACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | CATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTAGGAAGTCATTTACAAACTCCTCATaGATGGCTAAGCTTCTGCGT | + |
Preference number: 5 (lower is better) Translates to: HVRRSQSSFKAVSSARKSFTNSS*MAKLLR Trigger: ACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAA...TGACTTCCTAGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | GACTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTACTCTTCCCAATGCCTaGAAAAAGTCCTCAGTAACG | + |
Preference number: 5 (lower is better) Translates to: DSCLHVRRSQSSFKAVSSTLPNA*KKSSVT Trigger: CGTTACTGAGGACTTTTTCAAGGCATTGGGAAGAGT...AGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | CTCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTTCATAAGCAGTTTCTaGAAGCAAGGCCATCTGTTC | + |
Preference number: 5 (lower is better) Translates to: LMSSCTTLPVILQSSEFCFISSF*KQGHLF Trigger: GAACAGATGGCCTTGCTTCAAGAAACTGCTTATGAA...GCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | CCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACAACAGCCTGAATGTTTCTCTTCATCTAAGGTATACTaGTATAAGACAGGCCTGTCC | + |
Preference number: 5 (lower is better) Translates to: PAPGMKVSRKGQQPECFSSSKVY*YKTGLS Trigger: GGACAGGCCTGTCTTATACAAGTATACCTTAGATGA...AGAGAAACATTCAGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | CTATTTAAATACATACAAACCTGCACCAGGCATGAAAGTAAGCAGGAAGGGACACTCAGAGGCAGTAGCTaGATGGAGCCATGCCAGCAT | + |
Preference number: 5 (lower is better) Translates to: LFKYIQTCTRHESKQEGTLRGSS*MEPCQH Trigger: ATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAG...TGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGGTTTGTATGTATTTAAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | GCTATTCAATTAGAGGAAAGCAGCGGGACCTTCCATAAGCGGACGCTCATTGCCATGCCCAACGACTTCTaGGATATTTTCTTTAACACC | + |
Preference number: 5 (lower is better) Translates to: AIQLEESSGTFHKRTLIAMPNDF*DIFFNT Trigger: GGTGTTAAAGAAAATATCCAAGAAGTCGTTGGGCAT...GGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTGAATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | TCATGTCTTCATGTACGACGCTCCCAGTCATCCTTCAAAGCAGTGAGTTCTGCTTCATCTAAGGTATACTaGTATAAGACAGGCCTGTCC | + |
Preference number: 5 (lower is better) Translates to: SCLHVRRSQSSFKAVSSASSKVY*YKTGLS Trigger: GGACAGGCCTGTCTTATACAAGTATACCTTAGATGA...AGCAGAACTCACTGCTTTGAAGGATGACTGGGAGCGTCGTACATGAAGACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAAAAGGCTGAAAGGGCCTaGAGAGCTTCCAACATCTCC | + |
Preference number: 5 (lower is better) Translates to: GLSLSSDLSAKCLFKYIQKAERA*RASNIS Trigger: GGAGATGTTGGAAGCTCTCAAGGCCCTTTCAGCCTT...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | CCCCATCAAACCCATCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCATTTACAAACTCCTCATaGATGGCTAAGCTTCTGCGT | + |
Preference number: 5 (lower is better) Translates to: PHQTHQHLFWDQKHGLGSFTNSS*MAKLLR Trigger: ACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAA...TGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | CCTAAGCAGTCCTGGGTGTTCCTACAGTTCTGGATGGACTCATGTCTTCATGTAATGCCCAACGACTTCTaGGATATTTTCTTTAACACC | + |
Preference number: 5 (lower is better) Translates to: PKQSWVFLQFWMDSCLHVMPNDF*DIFFNT Trigger: GGTGTTAAAGAAAATATCCAAGAAGTCGTTGGGCAT...TACATGAAGACATGAGTCCATCCAGAACTGTAGGAACACCCAGGACTGCTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193432.6 |
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CDS-3UTR CAA 90 bp | AGCCTGAATGTTTCTCTCCCCATCAAACCCATCAACACCTATTTTGGGATCAGAATGCTCTCTGGATCTTaGTATGCGTTGTCTGGATTC | + |
Preference number: 5 (lower is better) Translates to: SLNVSLPIKPINTYFGIRMLSGS*YALSGF Trigger: GAATCCAGACAACGCATACAAAGATCCAGAGAGCAT...TCTGATCCCAAAATAGGTGTTGATGGGTTTGATGGGGAGAGAAACATTCAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | AGCGGGATCTGTCTCCTCTGTTGTACTTCCTTTCTATCAGTATTCTTTCCAAAAGCCTGTACATCTTCATaGATGCTTTCAAGCTCCTCC | + |
Preference number: 5 (lower is better) Translates to: SGICLLCCTSFLSVFFPKACTSS*MLSSSS Trigger: GGAGGAGCTTGAAAGCATCAATGAAGATGTACAGGC...TTTTGGAAAGAATACTGATAGAAAGGAAGTACAACAGAGGAGACAGATCCCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | TCAACACCTATTTTGGGATCAGAAACATGGGCTAGGTTCAAGAAGCTATTCAATCTTGAGTCTGTTCTTTaGCTGCCTGTAAGCGACTTG | + |
Preference number: 5 (lower is better) Translates to: STPILGSETWARFKKLFNLESVL*LPVSDL Trigger: CAAGTCGCTTACAGGCAGCAAAAGAACAGACTCAAG...ATTGAATAGCTTCTTGAACCTAGCCCATGTTTCTGATCCCAAAATAGGTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS-3UTR CAA 90 bp | GGTCTTTCCCTCTCTTCCGACCTATCAGCTAAGTGTCTATTTAAATACATACAATTCATAAGCAGTTTCTaGAAGCAAGGCCATCTGTTC | + |
Preference number: 5 (lower is better) Translates to: GLSLSSDLSAKCLFKYIQFISSF*KQGHLF Trigger: GAACAGATGGCCTTGCTTCAAGAAACTGCTTATGAA...TTGTATGTATTTAAATAGACACTTAGCTGATAGGTCGGAAGAGAGGGAAAGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS CAA 72 bp | TCCAGGATCTTGTGCAGCTTACGCGACAGCGGATTGTaGGGCTGCGCGGGGGTCGCACCTGCCCCATTACTG | + |
Preference number: 6 (lower is better) Translates to: SRILCSLRDSGL*GCAGVAPAPLL Trigger: CAGTAATGGGGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 ENSMUST00000195183.2 |
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CDS CAA 72 bp | GTCTCCAGGATCTTGTGCAGCTTACGCGACAGCGGATaGTTGGGCTGCGCGGGGGTCGCACCTGCCCCATTA | + |
Preference number: 6 (lower is better) Translates to: VSRILCSLRDSG*LGCAGVAPAPL Trigger: TAATGGGGCAGGTGCGACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 ENSMUST00000195183.2 |
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CDS TCA 72 bp | TGCGACGCCAGAATATCCCGCAGCAAAGTGAGGGTCTaGCTCAGGGCAGAGCTGGGTCCGAGGTCAGGTGGT | + |
Preference number: 6 (lower is better) Translates to: CDARISRSKVRV*LRAELGPRSGG Trigger: ACCACCTGACCTCGGACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTGCTGCGGGATATTCTGGCGTCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 90 bp | GCTTCCAACATCTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGCGGATTGTTGGGCTGCGCGGGGGTC | + |
Preference number: 6 (lower is better) Translates to: ASNISLSFSSRVSRI*CSLRDSGLLGCAGV Trigger: GACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAGATGTTGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 90 bp | GCTTCCAGATGTTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGCGGATTGTTGGGCTGCGCGGGGGTC | + |
Preference number: 6 (lower is better) Translates to: ASRCSLSFSSRVSRI*CSLRDSGLLGCAGV Trigger: GACCCCCGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAACATCTGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195183.2 |
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CDS TCA 72 bp | AAGAATCATGCGACGCCAGAATATCCCGCAGCAAAGTaGGGGTCTGACTCAGGGCAGAGCTGGGTCCGAGGT | + |
Preference number: 6 (lower is better) Translates to: KNHATPEYPAAK*GSDSGQSWVRG Trigger: ACCTCGGACCCAGCTCTGCCCTGAGTCAGACCCTCACTTTGCTGCGGGATATTCTGGCGTCGCATGATTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | AGCATGTCTCCCACATACCTCAGCGGGTCATGGGAGTaGATTTCAATGGGCCTAGGTGTACCTCCTGGCCCT | + |
Preference number: 6 (lower is better) Translates to: SMSPTYLSGSWE*ISMGLGVPPGP Trigger: AGGGCCAGGAGGTACACCTAGGCCCATTGAAATGCACTCCCATGACCCGCTGAGGTATGTGGGAGACATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | GCCTGCCGAGCATCCAAGGGGATGACTGAAGAATCATaGGACGCCAGAATATCCCGCAGCAAAGTGAGGGTC | + |
Preference number: 6 (lower is better) Translates to: ACRASKGMTEES*DARISRSKVRV Trigger: GACCCTCACTTTGCTGCGGGATATTCTGGCGTCGCATGATTCTTCAGTCATCCCCTTGGATGCTCGGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 72 bp | CTGACTCAGGGCAGAGCTGGGTCCGAGGTCAGGTGGTaGGAGCTCAACCTTGTCCATCAGTTTATTCGCATG | + |
Preference number: 6 (lower is better) Translates to: LTQGRAGSEVRW*ELNLVHQFIRM Trigger: CATGCGAATAAACTGATGGACAAGGTTGAGCTCCCACCACCTGACCTCGGACCCAGCTCTGCCCTGAGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 ENSMUST00000195183.2 |
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CDS GCA 72 bp | TCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTTGTaGAGCTTACGCGACAGCGGATTGTTGGGCTGCGCG | + |
Preference number: 6 (lower is better) Translates to: SLSFSSRVSRIL*SLRDSGLLGCA Trigger: CGCGCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 ENSMUST00000195183.2 |
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CDS CCA 72 bp | CATGCCAGCATGTCTCCCACATACCTCAGCGGGTCATaGGAGTGCATTTCAATGGGCCTAGGTGTACCTCCT | + |
Preference number: 6 (lower is better) Translates to: HASMSPTYLSGS*ECISMGLGVPP Trigger: AGGAGGTACACCTAGGCCCATTGAAATGCACTCCCATGACCCGCTGAGGTATGTGGGAGACATGCTGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS TCA 72 bp | CACAAAGTCAGCCTGCCGAGCATCCAAGGGGATGACTaGAGAATCATGCGACGCCAGAATATCCCGCAGCAA | + |
Preference number: 6 (lower is better) Translates to: HKVSLPSIQGDD*RIMRRQNIPQQ Trigger: TTGCTGCGGGATATTCTGGCGTCGCATGATTCTTCAGTCATCCCCTTGGATGCTCGGCAGGCTGACTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | TCCAGGGCACAGGACAAAACCTGCACAAAGTCAGCCTaGCGAGCATCCAAGGGGATGACTGAAGAATCATGC | + |
Preference number: 6 (lower is better) Translates to: SRAQDKTCTKSA*RASKGMTEESC Trigger: GCATGATTCTTCAGTCATCCCCTTGGATGCTCGGCAGGCTGACTTTGTGCAGGTTTTGTCCTGTGCCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | TGGATCTTTGTATGCGTTGTCTGGATTCATCACGGCTaGATGCACTTCCGCGTAGGCTCTGCAGACGAGCTC | + |
Preference number: 6 (lower is better) Translates to: WIFVCVVWIHHG*MHFRVGSADEL Trigger: GAGCTCGTCTGCAGAGCCTACGCGGAAGTGCATGCAGCCGTGATGAATCCAGACAACGCATACAAAGATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS CCA 72 bp | ACTTGTATAAGACAGGCCTGTCCTGCAGGGCTTCCATaGCCTGGGATAACACCGCAGACACATCACAGGACT | + |
Preference number: 6 (lower is better) Translates to: TCIRQACPAGLP*PGITPQTHHRT Trigger: AGTCCTGTGATGTGTCTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTTATACAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS TCA 72 bp | AGAGCTTCCAGATGTTCCTTCTCAGAGGCAGTAGCTTaGTGGAGCCATGCCAGCATGTCTCCCACATACCTC | + |
Preference number: 6 (lower is better) Translates to: RASRCSFSEAVA*WSHASMSPTYL Trigger: GAGGTATGTGGGAGACATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAGAAGGAACATCTGGAAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | CCGCAGACACATCACAGGACTCTTGAGTCAGTGCTCTaGACTCGCTTTGAGCCCACCGGTAAAGTCTTTCAT | + |
Preference number: 6 (lower is better) Translates to: PQTHHRTLESVL*TRFEPTGKVFH Trigger: ATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTGTCTGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 72 bp | GTACCGCGGAGGAGACTCATTTCATCCGAAGTCAGCTaGAACTTGGCCAAAAAGGCATCCACAACCTGTGCT | + |
Preference number: 6 (lower is better) Translates to: VPRRRLISSEVS*NLAKKASTTCA Trigger: AGCACAGGTTGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTCGGATGAAATGAGTCTCCTCCGCGGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 72 bp | GAGCCATTGCAGCCTTCAGCGCCACAGCATCCAGGTTaGGCATATTGGCTAAAGAACCCTGATCAGGTCTAT | + |
Preference number: 6 (lower is better) Translates to: EPLQPSAPQHPG*AYWLKNPDQVY Trigger: ATAGACCTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGCGCTGAAGGCTGCAATGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 72 bp | ATCTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGCGGATTGTTGGGCTGC | + |
Preference number: 6 (lower is better) Translates to: ISLSFSSRVSRI*CSLRDSGLLGC Trigger: GCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 72 bp | GAGAGCTTCCAGATGTTCCTTCTCAGAGGCAGTAGCTaGATGGAGCCATGCCAGCATGTCTCCCACATACCT | + |
Preference number: 6 (lower is better) Translates to: ESFQMFLLRGSS*MEPCQHVSHIP Trigger: AGGTATGTGGGAGACATGCTGGCATGGCTCCATCAAGCTACTGCCTCTGAGAAGGAACATCTGGAAGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 72 bp | TGTTCCTTGTCATTTTCTAGCCGTGTCTCCAGGATCTaGTGCAGCTTACGCGACAGCGGATTGTTGGGCTGC | + |
Preference number: 6 (lower is better) Translates to: CSLSFSSRVSRI*CSLRDSGLLGC Trigger: GCAGCCCAACAATCCGCTGTCGCGTAAGCTGCACAAGATCCTGGAGACACGGCTAGAAAATGACAAGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195183.2 |
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CDS CAA 90 bp | TACAGTGAGTTGACCATGAACGTGGCCATGTCAGCTGTGCCTAAATaGCTGGCTGACACTGTACACATCTGGAGGAGAGGATCCAGGGCA | + |
Preference number: 6 (lower is better) Translates to: YSELTMNVAMSAVPK*LADTVHIWRRGSRA Trigger: TGCCCTGGATCCTCTCCTCCAGATGTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTGACATGGCCACGTTCATGGTCAACTCACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | TCATCTAAGGTATACTTGTATAAGACAGGCCTGTCCTaGAGGGCTTCCATGGCCTGGGATAACACCGCAGAC | + |
Preference number: 6 (lower is better) Translates to: SSKVYLYKTGLS*RASMAWDNTAD Trigger: GTCTGCGGTGTTATCCCAGGCCATGGAAGCCCTGCAGGACAGGCCTGTCTTATACAAGTATACCTTAGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 72 bp | ATGGGAGTGCATTTCAATGGGCCTAGGTGTACCTCCTaGCCCTCCTCTTGTAAGAGCATCAATAAACCCACG | + |
Preference number: 6 (lower is better) Translates to: MGVHFNGPRCTS*PSSCKSINKPT Trigger: CGTGGGTTTATTGATGCTCTTACAAGAGGAGGGCCAGGAGGTACACCTAGGCCCATTGAAATGCACTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 72 bp | CAGCCTTCAGCGCCACAGCATCCAGGTTGGGCATATTaGCTAAAGAACCCTGATCAGGTCTATGTTGCTGTA | + |
Preference number: 6 (lower is better) Translates to: QPSAPQHPGWAY*LKNPDQVYVAV Trigger: TACAGCAACATAGACCTGATCAGGGTTCTTTAGCCAATATGCCCAACCTGGATGCTGTGGCGCTGAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CCA 72 bp | ATGAAGGATGCTCTCTGGATCTTTGTATGCGTTGTCTaGATTCATCACGGCTGCATGCACTTCCGCGTAGGC | + |
Preference number: 6 (lower is better) Translates to: MKDALWIFVCVV*IHHGCMHFRVG Trigger: GCCTACGCGGAAGTGCATGCAGCCGTGATGAATCCAGACAACGCATACAAAGATCCAGAGAGCATCCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS CAA 72 bp | TTGACCATGAACGTGGCCATGTCAGCTGTGCCTAAATaGCTGGCTGACACTGTACACATCTGGAGGAGAGGA | + |
Preference number: 6 (lower is better) Translates to: LTMNVAMSAVPK*LADTVHIWRRG Trigger: TCCTCTCCTCCAGATGTGTACAGTGTCAGCCAGCAATTTAGGCACAGCTGACATGGCCACGTTCATGGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | GCTCTGCAGACGAGCTCTGTAGACTGCTTTATAATCTaGTCCTTCACTGTGGCACTGAGAAGGGAATTCAGC | + |
Preference number: 6 (lower is better) Translates to: ALQTSSVDCFII*SFTVALRREFS Trigger: GCTGAATTCCCTTCTCAGTGCCACAGTGAAGGAGCAGATTATAAAGCAGTCTACAGAGCTCGTCTGCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS CAA 72 bp | CGGAGGAGACTCATTTCATCCGAAGTCAGCTGGAACTaGGCCAAAAAGGCATCCACAACCTGTGCTCTAATC | + |
Preference number: 6 (lower is better) Translates to: RRRLISSEVSWN*AKKASTTCALI Trigger: GATTAGAGCACAGGTTGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTCGGATGAAATGAGTCTCCTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 90 bp | CTTGTACCGCGGAGGAGACTCATTTCATCCGAAGTCAGCTGGAACTaGGCCAAAAAGGCATCCACAACCTGTGCTCTAATCTCTAGTCTT | + |
Preference number: 6 (lower is better) Translates to: LVPRRRLISSEVSWN*AKKASTTCALISSL Trigger: AAGACTAGAGATTAGAGCACAGGTTGTGGATGCCTTTTTGGCCAAGTTCCAGCTGACTTCGGATGAAATGAGTCTCCTCCGCGGTACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 90 bp | GCACTCGCTTTGAGCCCACCGGTAAAGTCTTTCATAAGCAGTTTCTaGAAGCAAGGCCATCTGTTCCATAATCTCCAAACCTGCCGTCTG | + |
Preference number: 6 (lower is better) Translates to: ALALSPPVKSFISSF*KQGHLFHNLQTCRL Trigger: CAGACGGCAGGTTTGGAGATTATGGAACAGATGGCCTTGCTTCAAGAAACTGCTTATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 90 bp | CGCAGACACATCACAGGACTCTTGAGTCAGTGCTCTGCACTCGCTTaGAGCCCACCGGTAAAGTCTTTCATAAGCAGTTTCTTGAAGCAA | + |
Preference number: 6 (lower is better) Translates to: RRHITGLLSQCSALA*SPPVKSFISSFLKQ Trigger: TTGCTTCAAGAAACTGCTTATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCACTGACTCAAGAGTCCTGTGATGTGTCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 90 bp | GTGAATTCGAACAGAGCCAGGGTTGTCTTCATCATGTACAGTGAGTaGACCATGAACGTGGCCATGTCAGCTGTGCCTAAATTGCTGGCT | + |
Preference number: 6 (lower is better) Translates to: VNSNRARVVFIMYSE*TMNVAMSAVPKLLA Trigger: AGCCAGCAATTTAGGCACAGCTGACATGGCCACGTTCATGGTCAACTCACTGTACATGATGAAGACAACCCTGGCTCTGTTCGAATTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | TTGAAGCAAGGCCATCTGTTCCATAATCTCCAAACCTaGCGTCTGCTGGTTGGTTCGCAAAAGAACCTTGAC | + |
Preference number: 6 (lower is better) Translates to: LKQGHLFHNLQT*RLLVGSQKNLD Trigger: GTCAAGGTTCTTTTGCGAACCAACCAGCAGACGGCAGGTTTGGAGATTATGGAACAGATGGCCTTGCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | GCAGTGTCTTCACCTGCTCAGGTGACCTATGAAGGATaGTCTCTGGATCTTTGTATGCGTTGTCTGGATTCA | + |
Preference number: 6 (lower is better) Translates to: AVSSPAQVTYEG*SLDLCMRCLDS Trigger: TGAATCCAGACAACGCATACAAAGATCCAGAGAGCATCCTTCATAGGTCACCTGAGCAGGTGAAGACACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036665.10 |
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CDS CAA 72 bp | ATCACAGGACTCTTGAGTCAGTGCTCTGCACTCGCTTaGAGCCCACCGGTAAAGTCTTTCATAAGCAGTTTC | + |
Preference number: 6 (lower is better) Translates to: ITGLLSQCSALA*SPPVKSFISSF Trigger: GAAACTGCTTATGAAAGACTTTACCGGTGGGCTCAAAGCGAGTGCAGAGCACTGACTCAAGAGTCCTGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 72 bp | AACAGAGCCAGGGTTGTCTTCATCATGTACAGTGAGTaGACCATGAACGTGGCCATGTCAGCTGTGCCTAAA | + |
Preference number: 6 (lower is better) Translates to: NRARVVFIMYSE*TMNVAMSAVPK Trigger: TTTAGGCACAGCTGACATGGCCACGTTCATGGTCAACTCACTGTACATGATGAAGACAACCCTGGCTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS GCA 72 bp | AAGGCCATCTGTTCCATAATCTCCAAACCTGCCGTCTaGTGGTTGGTTCGCAAAAGAACCTTGACGTCATTA | + |
Preference number: 6 (lower is better) Translates to: KAICSIISKPAV*WLVRKRTLTSL Trigger: TAATGACGTCAAGGTTCTTTTGCGAACCAACCAGCAGACGGCAGGTTTGGAGATTATGGAACAGATGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS TCA 72 bp | AACCTGCCGTCTGCTGGTTGGTTCGCAAAAGAACCTTaGCGTCATTATGAATCTGTTTCACTCTTCCCAATG | + |
Preference number: 6 (lower is better) Translates to: NLPSAGWFAKEP*RHYESVSLFPM Trigger: CATTGGGAAGAGTGAAACAGATTCATAATGACGTCAAGGTTCTTTTGCGAACCAACCAGCAGACGGCAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS TCA 72 bp | CAATCTGAAACTGAAGCATTTCTAGGCGCCTGTCTGTaGATTCGAACAGAGCCAGGGTTGTCTTCATCATGT | + |
Preference number: 6 (lower is better) Translates to: QSETEAFLGACL*IRTEPGLSSSC Trigger: ACATGATGAAGACAACCCTGGCTCTGTTCGAATTCACAGACAGGCGCCTAGAAATGCTTCAGTTTCAGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 90 bp | GCCTGTACATCTTCATTGATGCTTTCAAGCTCCTCCTTCACGTCTTaGAAGATGTTTACAAACTCCTCATTGATGGCTAAGCTTCTGCGT | + |
Preference number: 6 (lower is better) Translates to: ACTSSLMLSSSSFTS*KMFTNSSLMAKLLR Trigger: ACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAACATCTTCAAAGACGTGAAGGAGGAGCTTGAAAGCATCAATGAAGATGTACAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 72 bp | TCCTTCACGTCTTTGAAGATGTTTACAAACTCCTCATaGATGGCTAAGCTTCTGCGTTCAATATCACCACGT | + |
Preference number: 6 (lower is better) Translates to: SFTSLKMFTNSS*MAKLLRSISPR Trigger: ACGTGGTGATATTGAACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAACATCTTCAAAGACGTGAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 90 bp | TTACTATTAAATCTTGAGTCTGTTCTTTTGCTGCCTGTAAGCGACTaGTCATATCCTGACAACAGCTGCTCATGGCCTGTACATCTTCAT | + |
Preference number: 6 (lower is better) Translates to: LLLNLESVLLLPVSD*SYPDNSCSWPVHLH Trigger: ATGAAGATGTACAGGCCATGAGCAGCTGTTGTCAGGATATGACAAGTCGCTTACAGGCAGCAAAAGAACAGACTCAAGATTTAATAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 90 bp | TCAAGCTCCTCCTTCACGTCTTTGAAGATGTTTACAAACTCCTCATaGATGGCTAAGCTTCTGCGTTCAATATCACCACGTAAATTTCTT | + |
Preference number: 6 (lower is better) Translates to: SSSSFTSLKMFTNSS*MAKLLRSISPRKFL Trigger: AAGAAATTTACGTGGTGATATTGAACGCAGAAGCTTAGCCATCAATGAGGAGTTTGTAAACATCTTCAAAGACGTGAAGGAGGAGCTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |
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CDS CAA 72 bp | TCTTCATTGATGCTTTCAAGCTCCTCCTTCACGTCTTaGAAGATGTTTACAAACTCCTCATTGATGGCTAAG | + |
Preference number: 6 (lower is better) Translates to: SSLMLSSSSFTS*KMFTNSSLMAK Trigger: CTTAGCCATCAATGAGGAGTTTGTAAACATCTTCAAAGACGTGAAGGAGGAGCTTGAAAGCATCAATGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036665.10 ENSMUST00000193432.6 |