Pregenerated sensors for COG5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035933Ensembl transcript IDs: ENSMUST00000036862.5, ENSMUST00000218428.2, ENSMUST00000219837.2
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAAGAGCCACCTGCTTCAGATACCATGGGCATGTGCTGAGTGGATaGACCAGGGGGCAGCACAGCTCCATGATTCCCAGTGGGGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: QRATCFRYHGHVLSG*TRGQHSSMIPSGAQ Trigger: TTGGGCCCCACTGGGAATCATGGAGCTGTGCTGCCCCCTGGTGCATCCACTCAGCACATGCCCATGGTATCTGAAGCAGGTGGCTCTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | CAGGTGGATGGTGTCGGTGTCATTGTCTCAGCTCAAAGAGCCACCTaGTTCAGATACCATGGGCATGTGCTGAGTGGATGCACCAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: QVDGVGVIVSAQRAT*FRYHGHVLSGCTRG Trigger: CCCCCTGGTGCATCCACTCAGCACATGCCCATGGTATCTGAAGCAGGTGGCTCTTTGAGCTGAGACAATGACACCGACACCATCCACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | GCTGTCAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTaGACCACTTGCACTTTACTCCCTCCGGCTTCTGAGACAGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: AVSVSLVGQTLHLLQ*TTCTLLPPASETEQ Trigger: TTGCTCTGTCTCAGAAGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | TCTGTGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTaGAGTGCACCACTTGCACTTTACTCCCTCCGGCTTCTGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: SVLSVCLWWGRLCTY*SAPLALYSLRLLRQ Trigger: CTGTCTCAGAAGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | GTGTTTGACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTaGTGTCAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCA | + |
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Preference number: 1 (lower is better) Translates to: VFDRVPVSSATYPHL*CQCVSGGADFALTA Trigger: TGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTCAAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | GACGCTGGCCTTTCCATGAATAGCCACCACATGGCCCAGCATCTCTaGCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAAC | + |
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Preference number: 1 (lower is better) Translates to: DAGLSMNSHHMAQHL*QTQLLLVWPVPRDN Trigger: GTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAGATGCTGGGCCATGTGGTGGCTATTCATGGAAAGGCCAGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR TCA 90 bp | ATAAGTAGCCCAGGCTGGCCTCAAACTTGCTTTTGTCTCCAAGGATaGCCTTCACCTTCTGATGCTTCCGCCTCCAACCCTTGCGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: ISSPGWPQTCFCLQG*PSPSDASASNPCGP Trigger: AGGACCGCAAGGGTTGGAGGCGGAAGCATCAGAAGGTGAAGGTCATCCTTGGAGACAAAAGCAAGTTTGAGGCCAGCCTGGGCTACTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | GTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTaGACTTTACTCCCTCCGGCTTCTGAGACAGAGCAAGTACTTCAG | + |
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Preference number: 1 (lower is better) Translates to: VSLVGQTLHLLQCTT*TLLPPASETEQVLQ Trigger: CTGAAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | ATACCCTCATCTGTGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTTaGACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCCGGCTT | + |
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Preference number: 1 (lower is better) Translates to: IPSSVLSVCLWWGRL*TYCSAPLALYSLRL Trigger: AAGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGATGAGGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CCA 90 bp | TGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCTCTaGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTT | + |
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Preference number: 1 (lower is better) Translates to: CLLSHIPSSVLSVCL*WGRLCTYCSAPLAL Trigger: AAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR TCA 90 bp | ATTGTACCCACGATATCAGGAGTGAAGCAGACGCTGGCCTTTCCATaGATAGCCACCACATGGCCCAGCATCTCTGCCAAACACAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: IVPTISGVKQTLAFP*IATTWPSISAKHSC Trigger: GCAACTGTGTTTGGCAGAGATGCTGGGCCATGTGGTGGCTATTCATGGAAAGGCCAGCGTCTGCTTCACTCCTGATATCGTGGGTACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CCA 90 bp | ATGTCCTCCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTaGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: MSSLSDDDDLGWCNS*PSTIWHCFLWTGLF Trigger: GAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| 3UTR TCA 90 bp | GACAGTCATTGTAATGGTGCTGTTACCAGTCGACACCATTGTGTTTaGCCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: DSHCNGAVTSRHHCV*PRSCLLSHIPSSVL Trigger: CAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTCAAACACAATGGTGTCGACTGGTAACAGCACCATTACAATGACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CCA 90 bp | ACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATaGCAGGTGGATGGTGTCGGTGTCATTGTCTCAGCTCAAAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: TQLLLVWPVPRDNIT*QVDGVGVIVSAQRA Trigger: GGCTCTTTGAGCTGAGACAATGACACCGACACCATCCACCTGCCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CCA 90 bp | GGCATTTTCTGTATGTCCTCCCTGTCAGATGATGATGATCTGGGCTaGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: GIFCMSSLSDDDDLG*CNSWPSTIWHCFLW Trigger: CCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACATACAGAAAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| 3UTR CCA 90 bp | AGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGATGATGATGATCTaGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: SQAFSVCPPCQMMMI*AGAIPGHPPFGTAF Trigger: GAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACATACAGAAAATGCCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| 3UTR GCA 90 bp | ATTTTCTGTATGTCCTCCCTGTCAGATGATGATGATCTGGGCTGGTaGAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACG | + |
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Preference number: 1 (lower is better) Translates to: IFCMSSLSDDDDLGW*NSWPSTIWHCFLWT Trigger: CGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACATACAGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| 3UTR GCA 90 bp | TCCTCAACTCCCTGCCGATGTGACTTCTTTCACTGGTTCGTTATGTaGTTAACACTAAAGAAAGTGGCAGGCTGGGAGGATACTGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SSTPCRCDFFHWFVM*LTLKKVAGWEDTVP Trigger: AGGGACAGTATCCTCCCAGCCTGCCACTTTCTTTAGTGTTAAGCACATAACGAACCAGTGAAAGAAGTCACATCGGCAGGGAGTTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | CTTGCCGCCTTTTATTTAGTGCAGGGGTTTGAACCCAAGGTTCTGTaGTTAAAGGCAAAGTATATCTATGGAACCACACAGCCATTCCCT | + |
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Preference number: 1 (lower is better) Translates to: LAAFYLVQGFEPKVL*LKAKYIYGTTQPFP Trigger: AGGGAATGGCTGTGTGGTTCCATAGATATACTTTGCCTTTAAGCACAGAACCTTGGGTTCAAACCCCTGCACTAAATAAAAGGCGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | GTTAGTAGTAACAGAAGTCCTGATCTGATGCTCTGTGTGTTCTTGTaGCATGATGGCAGGCAGAGTCTTAAAGATCCCTCACCATTATTA | + |
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Preference number: 1 (lower is better) Translates to: VSSNRSPDLMLCVFL*HDGRQSLKDPSPLL Trigger: TAATAATGGTGAGGGATCTTTAAGACTCTGCCTGCCATCATGGCACAAGAACACACAGAGCATCAGATCAGGACTTCTGTTACTACTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR TCA 90 bp | TTAAACCTGATGCTTGTGTTTGTAAGTCTGCATCTGCATAAGTACTaGCTCTGGATGGAAAAGCTTGGAAGACCTTGGTCTCACCATTTG | + |
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Preference number: 1 (lower is better) Translates to: LNLMLVFVSLHLHKY*LWMEKLGRPWSHHL Trigger: CAAATGGTGAGACCAAGGTCTTCCAAGCTTTTCCATCCAGAGTCAGTACTTATGCAGATGCAGACTTACAAACACAAGCATCAGGTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CCA 90 bp | CACACAGCCATTCCCTACAAATTCTCTAATGTCTGGAACTTCATTTaGGACATTAGCACTTTTCTGTGCATGCTGGTCTCACATTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: HTAIPYKFSNVWNFI*DISTFLCMLVSHLF Trigger: AAACAAATGTGAGACCAGCATGCACAGAAAAGTGCTAATGTCCCAAATGAAGTTCCAGACATTAGAGAATTTGTAGGGAATGGCTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR TCA 90 bp | TCTTGCTCTGAGCTACAATCATGGCTTCTCATGTTACTTACCAAGTaGGAGTTTTGGTTAGTAATCACAGCTGTAAAATTGATTTACACT | + |
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Preference number: 1 (lower is better) Translates to: SCSELQSWLLMLLTK*EFWLVITAVKLIYT Trigger: AGTGTAAATCAATTTTACAGCTGTGATTACTAACCAAAACTCTCACTTGGTAAGTAACATGAGAAGCCATGATTGTAGCTCAGAGCAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 90 bp | TTCTCTAATGTCTGGAACTTCATTTGGGACATTAGCACTTTTCTGTaGATGCTGGTCTCACATTTGTTTAAATTTTCCAGATACTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: FSNVWNFIWDISTFL*MLVSHLFKFSRYLS Trigger: GCTTAAGTATCTGGAAAATTTAAACAAATGTGAGACCAGCATGCACAGAAAAGTGCTAATGTCCCAAATGAAGTTCCAGACATTAGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CAA 90 bp | CATACCCTCATCTGTGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTaGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: HTLICAVSVSLVGQT*HLLQCTTCTLLPPA Trigger: AGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGATGAGGGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGAGCCACCTGCTTCAGATACCATGGGCATGTGCTGAGTGGATGCACCAGACTCCCTCCGGCTTCTaGGACAGAGCAAGTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: SKSHLLQIPWACAEWMHQTPSGF*DRASTS Trigger: TGAAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGT...CTGGTGCATCCACTCAGCACATGCCCATGGTATCTGAAGCAGGTGGCTCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CAA 90 bp | TCCATGAATAGCCACCACATGGCCCAGCATCTCTGCCAAACACAGTaGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SMNSHHMAQHLCQTQ*LLVWPVPRDNITWQ Trigger: CTGCCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAGATGCTGGGCCATGTGGTGGCTATTCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR GCA 90 bp | TCGACACCATTGTGTTTGACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTTGCACTTACTGCAGTaGACCACTTGCACTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: STPLCLTAFLSPQPHTLILHLLQ*TTCTLL Trigger: GAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAA...GATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTCAAACACAATGGTGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR GCA 90 bp | TCGACACCATTGTGTTTGACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCAGACTTTGCACTTACTaGAGTGCACCACTTGCACTT | + |
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Preference number: 2 (lower is better) Translates to: STPLCLTAFLSPQPHTLIRLCTY*SAPLAL Trigger: AAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCT...GATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTCAAACACAATGGTGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR CCA 90 bp | CGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCTCTTCTGAGCTACAATCATaGCTTCTCATGTTACTTACC | + |
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Preference number: 2 (lower is better) Translates to: RVPVSSATYPHLCCQCVSSELQS*LLMLLT Trigger: GGTAAGTAACATGAGAAGCCATGATTGTAGCTCAGA...AGAGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR TCA 90 bp | CGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCTCTACAGAAAATCAACCATaGTCTTTAGTTGTAGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: RVPVSSATYPHLCCQCVSTENQP*SLVVVA Trigger: GGCAACTACAACTAAAGATCATGGTTGATTTTCTGT...AGAGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGTGTTCTTGTGCCATGATGGCAGGCAGAGTCTTAAAGATCCCTCACCAGGCAAAGTATATCTATaGAACCACACAGCCATTCCC | + |
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Preference number: 2 (lower is better) Translates to: LCVFLCHDGRQSLKDPSPGKVYL*NHTAIP Trigger: GGGAATGGCTGTGTGGTTCCATAGATATACTTTGCC...TGGTGAGGGATCTTTAAGACTCTGCCTGCCATCATGGCACAAGAACACACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR GCA 90 bp | GATGAGAAAGAAGTTTCACAATGCTGTCTTTGGCTGGTAGACGCCATTCTTATATCCGCCTCCAACCCTTaGGGTCCTTTCAGGGATTAC | + |
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Preference number: 2 (lower is better) Translates to: DEKEVSQCCLWLVDAILISASNP*GPFRDY Trigger: GTAATCCCTGAAAGGACCGCAAGGGTTGGAGGCGGA...TATAAGAATGGCGTCTACCAGCCAAAGACAGCATTGTGAAACTTCTTTCTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTGTCTCCAAGGATGACCTTCACCTTCTGATGCTTCCGCCTCCAACCCTTTGTGACTTCTTTCACTaGTTCGTTATGTGCTTAACA | + |
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Preference number: 2 (lower is better) Translates to: AFVSKDDLHLLMLPPPTLCDFFH*FVMCLT Trigger: TGTTAAGCACATAACGAACCAGTGAAAGAAGTCACA...AAGGGTTGGAGGCGGAAGCATCAGAAGGTGAAGGTCATCCTTGGAGACAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGAATGCCCCACGCTGCTGACACTGAACTTTCCTTTGGAAAATTGCCAGTTTATGCCAGGATTTCGTTaGAATGACCATGGTAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: VECPTLLTLNFPLENCQFMPGFR*NDHGSH Trigger: ATGACTACCATGGTCATTTCAACGAAATCCTGGCAT...AAACTGGCAATTTTCCAAAGGAAAGTTCAGTGTCAGCAGCGTGGGGCATTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219837.2 |
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| 3UTR CAA 90 bp | ATGAAGAACGAAGAAAGGAGGATGTACACATTAGAAGCAAAGGCTTaGGCTGAAGAACAAAAGCGTTTAAATCCTGACTGTTGGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: MKNEERRMYTLEAKA*AEEQKRLNPDCWKR Trigger: CCTTTTCCAACAGTCAGGATTTAAACGCTTTTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATCCTCCTTTCTTCGTTCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR-3UTR CCA 90 bp | GATGAGAAAGAAGTTTCACAATGCTGTCTTTGGCTGGTAGACGCCATTCTTATACTTTTCTGTGCATGCTaGTCTCACATTTGTTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: DEKEVSQCCLWLVDAILILFCAC*SHICLN Trigger: ATTTAAACAAATGTGAGACCAGCATGCACAGAAAAG...TATAAGAATGGCGTCTACCAGCCAAAGACAGCATTGTGAAACTTCTTTCTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CAA 90 bp | TTCATTTGGGACATTAGCACTTTTCTGTGCATGCTGGTCTCACATTaGTTTAAATTTTCCAGATACTTAAGCTATGAGCCATTAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: FIWDISTFLCMLVSH*FKFSRYLSYEPLGN Trigger: GTTTCCTAATGGCTCATAGCTTAAGTATCTGGAAAATTTAAACAAATGTGAGACCAGCATGCACAGAAAAGTGCTAATGTCCCAAATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 72 bp | CGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTaGTGTCAGTGTGTCTCTGGTGGGGCAGACTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: RVPVSSATYPHL*CQCVSGGADFA Trigger: TGCAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 72 bp | ACCTGCTTCAGATACCATGGGCATGTGCTGAGTGGATaGACCAGGGGGCAGCACAGCTCCATGATTCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: TCFRYHGHVLSG*TRGQHSSMIPS Trigger: ACTGGGAATCATGGAGCTGTGCTGCCCCCTGGTGCATCCACTCAGCACATGCCCATGGTATCTGAAGCAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CCA 72 bp | TGTCTCAGCTCAAAGAGCCACCTGCTTCAGATACCATaGGCATGTGCTGAGTGGATGCACCAGGGGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: CLSSKSHLLQIP*ACAEWMHQGAA Trigger: TGCTGCCCCCTGGTGCATCCACTCAGCACATGCCCATGGTATCTGAAGCAGGTGGCTCTTTGAGCTGAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 72 bp | GTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTaGACCACTTGCACTTTACTCCCTCCGGCTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: VSLVGQTLHLLQ*TTCTLLPPASE Trigger: CTCAGAAGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR TCA 72 bp | CCAGGCTGGCCTCAAACTTGCTTTTGTCTCCAAGGATaGCCTTCACCTTCTGATGCTTCCGCCTCCAACCCT | + |
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Preference number: 3 (lower is better) Translates to: PGWPQTCFCLQG*PSPSDASASNP Trigger: AGGGTTGGAGGCGGAAGCATCAGAAGGTGAAGGTCATCCTTGGAGACAAAAGCAAGTTTGAGGCCAGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 72 bp | GGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTaGTTTCTTTGGACGGGTCTGTTCATGGAGACTGCA | + |
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Preference number: 3 (lower is better) Translates to: GWCNSWPSTIWH*FLWTGLFMETA Trigger: TGCAGTCTCCATGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| 3UTR GCA 72 bp | TCAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTaGAGTGCACCACTTGCACTTTACTCCCTCCGGCTT | + |
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Preference number: 3 (lower is better) Translates to: SVCLWWGRLCTY*SAPLALYSLRL Trigger: AAGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR GCA 72 bp | GGTGTCGGTGTCATTGTCTCAGCTCAAAGAGCCACCTaGTTCAGATACCATGGGCATGTGCTGAGTGGATGC | + |
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Preference number: 3 (lower is better) Translates to: GVGVIVSAQRAT*FRYHGHVLSGC Trigger: GCATCCACTCAGCACATGCCCATGGTATCTGAAGCAGGTGGCTCTTTGAGCTGAGACAATGACACCGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR CCA 72 bp | AGCCACATACCCTCATCTGTGCTGTCAGTGTGTCTCTaGTGGGGCAGACTTTGCACTTACTGCAGTGCACCA | + |
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Preference number: 3 (lower is better) Translates to: SHIPSSVLSVCL*WGRLCTYCSAP Trigger: TGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGATGAGGGTATGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
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| 3UTR TCA 72 bp | ACGATATCAGGAGTGAAGCAGACGCTGGCCTTTCCATaGATAGCCACCACATGGCCCAGCATCTCTGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TISGVKQTLAFP*IATTWPSISAK Trigger: TTTGGCAGAGATGCTGGGCCATGTGGTGGCTATTCATGGAAAGGCCAGCGTCTGCTTCACTCCTGATATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR GCA 72 bp | TCTGTGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTTaGACTTACTGCAGTGCACCACTTGCACTTTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: SVLSVCLWWGRL*TYCSAPLALYS Trigger: GGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CCA 72 bp | GCCAGTGCCAAGAGACAACATAACATGGCAGGTGGATaGTGTCGGTGTCATTGTCTCAGCTCAAAGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ASAKRQHNMAGG*CRCHCLSSKSH Trigger: GTGGCTCTTTGAGCTGAGACAATGACACCGACACCATCCACCTGCCATGTTATGTTGTCTCTTGGCACTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CCA 72 bp | GCCCAGCATCTCTGCCAAACACAGTTGCTTCTAGTCTaGCCAGTGCCAAGAGACAACATAACATGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: AQHLCQTQLLLV*PVPRDNITWQV Trigger: CACCTGCCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAGATGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCTCTTACCAAGTGAGAGTTTaGGTTAGTAATCACAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RVPVSSATYPHLCCQCVSYQVRV*VSNHSC Trigger: ACAGCTGTGATTACTAACCAAAACTCTCACTTGGTA...AGAGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR GCA 72 bp | CCCTGCCGATGTGACTTCTTTCACTGGTTCGTTATGTaGTTAACACTAAAGAAAGTGGCAGGCTGGGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PCRCDFFHWFVM*LTLKKVAGWED Trigger: ATCCTCCCAGCCTGCCACTTTCTTTAGTGTTAAGCACATAACGAACCAGTGAAAGAAGTCACATCGGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR GCA 72 bp | GAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTaGTCTGAGCTACAATCATGGCTTCTCATGTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: ETEQVLQQSCCS*SELQSWLLMLL Trigger: AAGTAACATGAGAAGCCATGATTGTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR GCA 72 bp | CTCCAACCCTTGCGGTCCTTTCAGGGATTACAGCTATaGAATACAAGCTCAGGTTCTGTGTATGTGTACATT | + |
|
Preference number: 3 (lower is better) Translates to: LQPLRSFQGLQL*NTSSGSVYVYI Trigger: AATGTACACATACACAGAACCTGAGCTTGTATTGCATAGCTGTAATCCCTGAAAGGACCGCAAGGGTTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CCA 72 bp | TACTCCTCAACTCCCTGCCGATGTGACTTCTTTCACTaGTTCGTTATGTGCTTAACACTAAAGAAAGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YSSTPCRCDFFH*FVMCLTLKKVA Trigger: TGCCACTTTCTTTAGTGTTAAGCACATAACGAACCAGTGAAAGAAGTCACATCGGCAGGGAGTTGAGGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR GCA 72 bp | AGGAGACACAGGAAGGATGAGAAAGAAGTTTCACAATaGTGTCTTTGGCTGGTAGACGCCATTCTTATAACT | + |
|
Preference number: 3 (lower is better) Translates to: RRHRKDEKEVSQ*CLWLVDAILIT Trigger: AGTTATAAGAATGGCGTCTACCAGCCAAAGACAGCATTGTGAAACTTCTTTCTCATCCTTCCTGTGTCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR TCA 72 bp | CCAACTGATAAATGGATGCATATGCCAGGATTTCGTTaGAATGACCATGGTAGTCTTGATCTTTCCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PTDKWMHMPGFR*NDHGSLDLSPS Trigger: AGAAGGGGAAAGATCAAGACTACCATGGTCATTTCAACGAAATCCTGGCATATGCATCCATTTATCAGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CCA 72 bp | AACCACACAGCCATTCCCTACAAATTCTCTAATGTCTaGAACTTCATTTGGGACATTAGCACTTTTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: NHTAIPYKFSNV*NFIWDISTFLC Trigger: GCACAGAAAAGTGCTAATGTCCCAAATGAAGTTCCAGACATTAGAGAATTTGTAGGGAATGGCTGTGTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR GCA 72 bp | TTTTATTTAGTGCAGGGGTTTGAACCCAAGGTTCTGTaGTTAAAGGCAAAGTATATCTATGGAACCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: FYLVQGFEPKVL*LKAKYIYGTTQ Trigger: CTGTGTGGTTCCATAGATATACTTTGCCTTTAAGCACAGAACCTTGGGTTCAAACCCCTGCACTAAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CCA 72 bp | ATTCCCTACAAATTCTCTAATGTCTGGAACTTCATTTaGGACATTAGCACTTTTCTGTGCATGCTGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IPYKFSNVWNFI*DISTFLCMLVS Trigger: TGAGACCAGCATGCACAGAAAAGTGCTAATGTCCCAAATGAAGTTCCAGACATTAGAGAATTTGTAGGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CCA 72 bp | ACCCAAGGTTCTGTGCTTAAAGGCAAAGTATATCTATaGAACCACACAGCCATTCCCTACAAATTCTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: TQGSVLKGKVYL*NHTAIPYKFSN Trigger: ATTAGAGAATTTGTAGGGAATGGCTGTGTGGTTCCATAGATATACTTTGCCTTTAAGCACAGAACCTTGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CCA 72 bp | AGGAAGGATGAGAAAGAAGTTTCACAATGCTGTCTTTaGCTGGTAGACGCCATTCTTATAACTGTTCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RKDEKEVSQCCL*LVDAILITVLY Trigger: GTAAAGAACAGTTATAAGAATGGCGTCTACCAGCCAAAGACAGCATTGTGAAACTTCTTTCTCATCCTTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGAGAAAGAAGTTTCACAATGCTGTCTTTGGCTGGTAGACGCCATTCTTATAGTCTTTGATTTCTGGTaGACTGAATTCATGATACCT | + |
|
Preference number: 3 (lower is better) Translates to: DEKEVSQCCLWLVDAILIVFDFW*TEFMIP Trigger: AGGTATCATGAATTCAGTCAACCAGAAATCAAAGAC...TATAAGAATGGCGTCTACCAGCCAAAGACAGCATTGTGAAACTTCTTTCTCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR GCA 72 bp | CTATCATTATTCCACCAACTGATAAATGGATGCATATaGCAGGATTTCGTTGAAATGACCATGGTAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLFHQLINGCI*QDFVEMTMVVL Trigger: CAAGACTACCATGGTCATTTCAACGAAATCCTGGCATATGCATCCATTTATCAGTTGGTGGAATAATGATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR GCA 72 bp | CTATCATTATTCCACCAACTGATAAATGGATGCATATaGCAGGATTTCGTTGAAATGACCATGGTAGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LSLFHQLINGCI*QDFVEMTMVVM Trigger: CATGACTACCATGGTCATTTCAACGAAATCCTGGCATATGCATCCATTTATCAGTTGGTGGAATAATGATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219837.2 |
||
| 3UTR TCA 72 bp | GAGCTACAATCATGGCTTCTCATGTTACTTACCAAGTaGGAGTTTTGGTTAGTAATCACAGCTGTAAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: ELQSWLLMLLTK*EFWLVITAVKL Trigger: CAATTTTACAGCTGTGATTACTAACCAAAACTCTCACTTGGTAAGTAACATGAGAAGCCATGATTGTAGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR TCA 72 bp | TTTTCCAGATACTTAAGCTATGAGCCATTAGGAAACTaGGAACCAATTATTTTGTTTCCACAGGGCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FSRYLSYEPLGN*EPIILFPQGSQ Trigger: TTGAGAGCCCTGTGGAAACAAAATAATTGGTTCTCAGTTTCCTAATGGCTCATAGCTTAAGTATCTGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR GCA 72 bp | GGAACTTCATTTGGGACATTAGCACTTTTCTGTGCATaGTGGTCTCACATTTGTTTAAATTTTCCAGATACT | + |
|
Preference number: 3 (lower is better) Translates to: GTSFGTLALFCA*WSHICLNFPDT Trigger: AGTATCTGGAAAATTTAAACAAATGTGAGACCAGCATGCACAGAAAAGTGCTAATGTCCCAAATGAAGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR TCA 90 bp | CTTTACTCCCTCCGGCTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTCCAGGGCTCCCCTaGGGAGGAGCAGCCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYSLRLLRQSKYFSSPAALPGLP*GGAACP Trigger: AGGACAGGCTGCTCCTCCTCAGGGGAGCCCTGGAAG...AGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGTAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTATAATGTCTCCCACTaGGGGGCTGTCGGCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: GLVQFLAIHHLALLSLDGYNVSH*GAVGHM Trigger: CATGTGGCCGACAGCCCCGCAGTGGGAGACATTATA...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCAGCCTCCTCGCACAGCTaGCTGGGAAGGCTGAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSASSHS*LGRLSQ Trigger: TTGACTCAGCCTTCCCAGTCAGCTGTGCGAGGAGGC...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | CTTTACTCCCTCCGGCTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTTGGGAGAAGCGAGCATaGGACCATTCTGCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYSLRLLRQSKYFSSPAAWEKRA*DHSALW Trigger: CCAGAGGGCAGAATGGTCTCATGCTCGCTTCTCCCA...AGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGTAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR TCA 90 bp | TACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGCTTCCAGGGCTCCCCTaGGGAGGAGCAGCCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRQTVSQSQAFSVCPPCQLPGLP*GGAACP Trigger: AGGACAGGCTGCTCCTCCTCAGGGGAGCCCTGGAAG...CTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTTCTTCTGTCCTTCCGTaGGAGGTCCAATCACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFSSVLP*EVQSPG Trigger: GCCAGGTGATTGGACCTCTCACGGAAGGACAGAAGA...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR GCA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCAGGCAACCTGAAGTCTTaGCAGTTGTGCAGTACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSGNLKS*QLCSTG Trigger: GCCCGTACTGCACAACTGGCAAGACTTCAGGTTGCC...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | TACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGACCTGCTGTGCTTCCTaGAGTTGGCATGGCGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YRQTVSQSQAFSVCPPCQTCCAS*SWHGGS Trigger: CGAGCCGCCATGCCAACTCCAGGAAGCACAGCAGGT...CTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCAGGACTGAAAGTCCCCTaGGTATTCTGGCTGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSGLKVP*VFWLDC Trigger: GCAGTCCAGCCAGAATACCCAGGGGACTTTCAGTCC...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | ATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTGTCGTCTTCCATGTGTaGGAGGTCCACACAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MMMIWAGAIPGHPPFGTAVVFHV*EVHTEV Trigger: GACCTCTGTGTGGACCTCCCACACATGGAAGACGAC...AGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | CGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCTCTCCTGTCCTTTTCAGATaGGTGATCATCCAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RVPVSSATYPHLCCQCVSPVLFR*VIIQPL Trigger: CAGTGGCTGGATGATCACCCATCTGAAAAGGACAGG...AGAGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CAA 72 bp | AGCCACCACATGGCCCAGCATCTCTGCCAAACACAGTaGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATA | + |
|
Preference number: 4 (lower is better) Translates to: SHHMAQHLCQTQ*LLVWPVPRDNI Trigger: TATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAGATGCTGGGCCATGTGGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCTCCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCATTCTGGCTGGACTGCTaGAGACGCTTCCATAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPPCQMMMIWAGAIPGHPFWLDC*RRFHKS Trigger: TGACTTATGGAAGCGTCTTCAGCAGTCCAGCCAGAA...TGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | GGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTGCTGAGAATGAGCTCTaGCTGGCAACAACCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GWCNSWPSTIWHCFLWTGAENEL*LATTFV Trigger: AACAAAGGTTGTTGCCAGTCAGAGCTCATTCTCAGC...ACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCATCCTTTTCAGATGGGTaGTCATCCAGCCACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSSFSDG*SSSHWE Trigger: CTCCCAGTGGCTGGATGATCACCCATCTGAAAAGGA...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | TCAAAGAGCCACCTGCTTCAGATACCATGGGCATGTGCTGAGTGGATGCACCAGGTCCCTGCTTCTCACTaGCTGAACATAAGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKSHLLQIPWACAEWMHQVPASH*LNISFQ Trigger: CTGGAAGCTTATGTTCAGTCAGTGAGAAGCAGGGAC...CTGGTGCATCCACTCAGCACATGCCCATGGTATCTGAAGCAGGTGGCTCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGACCTTTGTTACTGACTaGTGCAGCTTAAACAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLVQFLAIHHLALLSLDGTFVTD*CSLNRE Trigger: CTCCCTGTTTAAGCTGCACCAGTCAGTAACAAAGGT...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGCCTGGAGCCTCTTACTaGGATATAAGATGCGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: GLVQFLAIHHLALLSLDGPGASY*DIRCEL Trigger: TAATTCGCATCTTATATCTCAGTAAGAGGCTCCAGG...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | ATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTGTCCCTGCTTCTCACTaGCTGAACATAAGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MMMIWAGAIPGHPPFGTAVPASH*LNISFQ Trigger: CTGGAAGCTTATGTTCAGTCAGTGAGAAGCAGGGAC...AGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR GCA 90 bp | CTGTACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCCCGAAAACCTGCTGTaGTTCCTGGAGTTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LYRQTVSQSQAFSVCPPCPENLL*FLELAW Trigger: CCATGCCAACTCCAGGAAGCACAGCAGGTTTTCGGG...ACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTAGCAGACGCTTAGCTTaGTTTTCCACTTCAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GWCNSWPSTIWHCFLWTGSRRLA*FSTSSR Trigger: TCGACTTGAAGTGGAAAACCAAGCTAAGCGTCTGCT...ACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCATGTTCCAACCTGAGTTaGATTCTGGGTCTCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSCSNLS*ILGLHT Trigger: GGTGTGGAGACCCAGAATCCAACTCAGGTTGGAACA...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | TACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGGTCAGGAGTCCCACTTaGACTGAAAGTCCCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YRQTVSQSQAFSVCPPCQVRSPT*TESPLG Trigger: ACCCAGGGGACTTTCAGTCCAAGTGGGACTCCTGAC...CTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTGGATTTCAGCTCAGCTaGTGCTCTTGTGAACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GWCNSWPSTIWHCFLWTGGFQLS*CSCEQK Trigger: TTTCTGTTCACAAGAGCACCAGCTGAGCTGAAATCC...ACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTCCTGTCCTTTTCAGATaGGTGATCATCCAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFPVLFR*VIIQPL Trigger: CAGTGGCTGGATGATCACCCATCTGAAAAGGACAGG...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| 3UTR CAA 72 bp | ATCTGTGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTaGCACTTACTGCAGTGCACCACTTGCACTTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: ICAVSVSLVGQT*HLLQCTTCTLL Trigger: GAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR TCA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCACTCGTCTGCATCATCTaGAGAACACCTTCCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSLVCII*RTPSKD Trigger: GTCTTTGGAAGGTGTTCTTCAGATGATGCAGACGAG...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTCTGGCCTTTTCAGTCTaGACATGTCTTGTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFLAFSV*TCLVCR Trigger: ACGACACACAAGACATGTTCAGACTGAAAAGGCCAG...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | AACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGATGATGATTGGGAGAAGCGAGCATaGGACCATTCTGCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSESESGIFCMSSLSDDDWEKRA*DHSALW Trigger: CCAGAGGGCAGAATGGTCTCATGCTCGCTTCTCCCA...ATCATCATCTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | TGCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGTCCTTTTCAGATGGGTaGTCATCCAGCCACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CQTQLLLVWPVPRDNITWSFSDG*SSSHWE Trigger: CTCCCAGTGGCTGGATGATCACCCATCTGAAAAGGA...CCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR GCA 90 bp | ATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTCCAATCACCTGGCTTaGATCTCCTTGAGTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MMMIWAGAIPGHPPFGTASNHLA*ISLSRE Trigger: CTCTCTACTCAAGGAGATGCAAGCCAGGTGATTGGA...AGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTTTAGGGCTGACATTATaGTTTGCTCGGCTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFLGLTL*FARLLL Trigger: CAGCAACAGCCGAGCAAACCATAATGTCAGCCCTAA...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGAGAAGAGTTTGTTGCTaGATGAAAGTGAGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLVQFLAIHHLALLSLDGRRVCC*MKVRRK Trigger: CTTTCTTCTCACTTTCATTCAGCAACAAACTCTTCT...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR GCA 90 bp | GGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTAATGGGATAAACTGGTaGAAATTCTTTACCGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GWCNSWPSTIWHCFLWTGNGINW*KFFTVP Trigger: AGGGACGGTAAAGAATTTGCACCAGTTTATCCCATT...ACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTACATGTTCACTTGTCTaGAAGAGCAGGGGCCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFTCSLV*KSRGLN Trigger: ATTTAGGCCCCTGCTCTTCCAGACAAGTGAACATGT...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTAATGATGATGCTGAATaGTATAATGTCTCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GWCNSWPSTIWHCFLWTGNDDAE*YNVSHC Trigger: GCAGTGGGAGACATTATACCATTCAGCATCATCATT...ACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | CTGTACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCTTTATCCAGCTGACTaGTCCCTTGGGCAAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYRQTVSQSQAFSVCPPCLYPAD*SLGQVL Trigger: CAAAACTTGCCCAAGGGATCAGTCAGCTGGATAAAG...ACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | AACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGATGATGATGCTGACTGGGAAGGCTaGGTCAAAACTTTGACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSESESGIFCMSSLSDDDADWEG*VKTLTS Trigger: GGACGTCAAAGTTTTGACTCAGCCTTCCCAGTCAGC...ATCATCATCTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | TGTCCTCCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACAAGCAGCACAGATGTaGTCCATAAGTTTTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: CPPCQMMMIWAGAIPGHPQAAQM*SISFSI Trigger: TATGGAAAAACTTATGGATCACATCTGTGCTGCTTG...TGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTTTTGTTACTGACTGGTaGAGCTTAAACAGGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFFVTDW*SLNREF Trigger: GAACTCCCTGTTTAAGCTGCACCAGTCAGTAACAAA...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | TACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGCCTTGCAGTTGTCCCTaGAGCCTCTTACTGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: YRQTVSQSQAFSVCPPCQPCSCP*SLLLRY Trigger: ATATCTCAGTAAGAGGCTCCAGGGACAACTGCAAGG...CTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCAAGAATGAGCTCTGACTaGCAACAACCTTTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSRMSSD*QQPLLL Trigger: CAGTAACAAAGGTTGTTGCCAGTCAGAGCTCATTCT...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | CTTTACTCCCTCCGGCTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTAATGATGATGCTGAATaGTATAATGTCTCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYSLRLLRQSKYFSSPAANDDAE*YNVSHC Trigger: GCAGTGGGAGACATTATACCATTCAGCATCATCATT...AGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGTAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR TCA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGATAATCAAGTTCATTaGGACTCTGAGCAGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFDNQVH*DSEQLL Trigger: CAAAAGCTGCTCAGAGTCTCAATGAACTTGATTATC...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCACTTGTGAACAGAAACTaGATGATGATGCTGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSLVNRN*MMMLNG Trigger: ACCATTCAGCATCATCATTCAGTTTCTGTTCACAAG...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR GCA 90 bp | TACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGGCAGCCTCATATGGTTaGAGTGAATCTTTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YRQTVSQSQAFSVCPPCQAASYG*SESFKA Trigger: GGCTTTGAAAGATTCACTGCAACCATATGAGGCTGC...CTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR GCA 90 bp | TTAATACAAGTTGAATGCCCCACGCTGCTGACACTGAACTTTCCTTTGGAAAATTATAATGTCTCCCACTaGGGGGCTGTCGGCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: LIQVECPTLLTLNFPLENYNVSH*GAVGHM Trigger: CATGTGGCCGACAGCCCCGCAGTGGGAGACATTATA...ATTTTCCAAAGGAAAGTTCAGTGTCAGCAGCGTGGGGCATTCAACTTGTATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR GCA 90 bp | TACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGTTTCAGCTCAGCTGGTaGTCTTGTGAACAGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: YRQTVSQSQAFSVCPPCQFQLSW*SCEQKL Trigger: CAGTTTCTGTTCACAAGAGCACCAGCTGAGCTGAAA...CTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR GCA 90 bp | TGCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGTTTCAGCTCAGCTGGTaGTCTTGTGAACAGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: CQTQLLLVWPVPRDNITWFQLSW*SCEQKL Trigger: CAGTTTCTGTTCACAAGAGCACCAGCTGAGCTGAAA...CCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCTCCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCATTCTGGATCATAATCTaGCCTTTTCAGTCTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CPPCQMMMIWAGAIPGHPFWIII*PFQSEH Trigger: ATGTTCAGACTGAAAAGGCCAGATTATGATCCAGAA...TGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | CTTTACTCCCTCCGGCTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCATAATGGGATAAACTaGTGCAAATTCTTTACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYSLRLLRQSKYFSSPAAHNGIN*CKFFTV Trigger: GACGGTAAAGAATTTGCACCAGTTTATCCCATTATG...AGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGTAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR CCA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCATTCACAGCATATAACTaGATGGTCTTTGCCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSFTAYN*MVFATF Trigger: AAATGTGGCAAAGACCATCCAGTTATATGCTGTGAA...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CCA 90 bp | GTTGAATGCCCCACGCTGCTGACACTGAACTTTCCTTTGGAAAATTGCCAGTTTGGATTTCAGCTCAGCTaGTGCTCTTGTGAACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VECPTLLTLNFPLENCQFGFQLS*CSCEQK Trigger: TTTCTGTTCACAAGAGCACCAGCTGAGCTGAAATCC...AAACTGGCAATTTTCCAAAGGAAAGTTCAGTGTCAGCAGCGTGGGGCATTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTCATAATGGGATAAACTaGTGCAAATTCTTTACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFHNGIN*CKFFTV Trigger: GACGGTAAAGAATTTGCACCAGTTTATCCCATTATG...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | TACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGCTCATATGGTTGCAGTaGATCTTTCAAAGCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRQTVSQSQAFSVCPPCQLIWLQ*IFQSLF Trigger: GAAAAGGCTTTGAAAGATTCACTGCAACCATATGAG...CTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCTGTTTTCTCTGTACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGAGGAAAAACCAAGTTaGTGGGATCGAAGAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KFLFSLYRQTVSQSQAFSEEKPS*WDRRGV Trigger: CACGCCTCTTCGATCCCATCAACTTGGTTTTTCCTC...AGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTACAGAGAAAACAGAAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | AACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGATGATGATTTGACACAGCTAATGTaGGGTTTGCATCAACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSESESGIFCMSSLSDDDLTQLM*GLHQQQ Trigger: CTGCTGTTGATGCAAACCTCACATTAGCTGTGTCAA...ATCATCATCTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCTGTTTTCTCTGTACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTAGCCAACTCCATCTGTaGAAAATCAGCAGCAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KFLFSLYRQTVSQSQAFSSQLHL*KISSKS Trigger: CGACTTGCTGCTGATTTTGCACAGATGGAGTTGGCT...AGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTACAGAGAAAACAGAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| 3UTR CAA 72 bp | AGCTTGGAAGACCTTGGTCTCACCATTTGTCTACATTaGTGTGACCATAAAATGCTGGGAGCATTGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLEDLGLTICLH*CDHKMLGALSF Trigger: AAAACTCAATGCTCCCAGCATTTTATGGTCACACAAATGTAGACAAATGGTGAGACCAAGGTCTTCCAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CAA 72 bp | CTAATACTGGAGTCTGCCTTTTCTATCAAGAACCACTaGAGTAGTACAGCAAGCAGATTTTCTCAAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LILESAFSIKNH*SSTASRFSQAS Trigger: GCTAGCTTGAGAAAATCTGCTTGCTGTACTACTCAAGTGGTTCTTGATAGAAAAGGCAGACTCCAGTATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCTGTTTTCTCTGTACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTAAGTCTTGCCAGTTGTaGAGTACGGGCTACTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KFLFSLYRQTVSQSQAFSKSCQL*STGYYF Trigger: AAAATAGTAGCCCGTACTGCACAACTGGCAAGACTT...AGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTACAGAGAAAACAGAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR TCA 90 bp | TTAATACAAGTTGAATGCCCCACGCTGCTGACACTGAACTTTCCTTTGGAAAATCTTGTGAACAGAAACTaGATGATGATGCTGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIQVECPTLLTLNFPLENLVNRN*MMMLNG Trigger: ACCATTCAGCATCATCATTCAGTTTCTGTTCACAAG...ATTTTCCAAAGGAAAGTTCAGTGTCAGCAGCGTGGGGCATTCAACTTGTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS-3UTR GCA 90 bp | GATGAGAAAGAAGTTTCACAATGCTGTCTTTGGCTGGTAGACGCCATTCTTATAAATGGGATAAACTGGTaGAAATTCTTTACCGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DEKEVSQCCLWLVDAILINGINW*KFFTVP Trigger: AGGGACGGTAAAGAATTTGCACCAGTTTATCCCATT...TATAAGAATGGCGTCTACCAGCCAAAGACAGCATTGTGAAACTTCTTTCTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| 3UTR CAA 72 bp | GAAGAAAGGAGGATGTACACATTAGAAGCAAAGGCTTaGGCTGAAGAACAAAAGCGTTTAAATCCTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EERRMYTLEAKA*AEEQKRLNPDC Trigger: ACAGTCAGGATTTAAACGCTTTTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATCCTCCTTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS CCA 90 bp | TCCAGAGGGAAGCCCGAAAACCTGCTGTGCTTCCTGGAGTTGGCATaGCGGCTCGCCCAGGGCCTCCTCGCACAGCTGACTGGGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRGKPENLLCFLELA*RLAQGLLAQLTGKA Trigger: AGCCTTCCCAGTCAGCTGTGCGAGGAGGCCCTGGGCGAGCCGCCATGCCAACTCCAGGAAGCACAGCAGGTTTTCGGGCTTCCCTCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGCGGCCACATGTTCACTaGTCTGGAAGAGCAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLVQFLAIHHLALLSLDGRPHVH*SGRAGA Trigger: GGCCCCTGCTCTTCCAGACAAGTGAACATGTGGCCG...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 90 bp | TCCTGGAGTTGGCATGGCGGCTCGCCCAGGGCCTCCTCGCACAGCTaGCTGGGAAGGCTGAGTCAAAACTTTGACGTCCAATGCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SWSWHGGSPRASSHS*LGRLSQNFDVQCIV Trigger: AACAATGCATTGGACGTCAAAGTTTTGACTCAGCCTTCCCAGTCAGCTGTGCGAGGAGGCCCTGGGCGAGCCGCCATGCCAACTCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 90 bp | CCATGTGTGGGAGGTCCACACAGAGGTCAGGAGTCCCACTTGGACTaGAAGTCCCCTGGGTATTCTGGCTGGACTGCTGAAGACGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PCVGGPHRGQESHLD*KSPGYSGWTAEDAS Trigger: GGAAGCGTCTTCAGCAGTCCAGCCAGAATACCCAGGGGACTTTCAGTCCAAGTGGGACTCCTGACCTCTGTGTGGACCTCCCACACATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 90 bp | ATGGCGGCTCGCCCAGGGCCTCCTCGCACAGCTGACTGGGAAGGCTaGGTCAAAACTTTGACGTCCAATGCATTGTTGATGCTGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MAARPGPPRTADWEG*VKTLTSNALLMLSS Trigger: GGAAGACAGCATCAACAATGCATTGGACGTCAAAGTTTTGACTCAGCCTTCCCAGTCAGCTGTGCGAGGAGGCCCTGGGCGAGCCGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | TGTCCTCCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACTGGGTCTCCACACCTaGCTCCAGCAGACGCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPPCQMMMIWAGAIPGHPLGLHT*LQQTLS Trigger: GCTAAGCGTCTGCTGGAGCAAGGTGTGGAGACCCAG...TGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS GCA 90 bp | ATGACCTCAGCATCCGATAGGACTTTCCCAGATCCGACACTCGCCTaGAAAGGGGGCCCACAGCCAACTCCATCTGTGCAAAATCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MTSASDRTFPDPTLA*KGGPQPTPSVQNQQ Trigger: CTGCTGATTTTGCACAGATGGAGTTGGCTGTGGGCCCCCTTTGCAGGCGAGTGTCGGATCTGGGAAAGTCCTATCGGATGCTGAGGTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS GCA 90 bp | TGGGTGATCATCCAGCCACTGGGAGAAGCGAGCATGAGACCATTCTaGCCTCTGGAAGGGGGATTTCAGCTCAGCTGGTGCTCTTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WVIIQPLGEASMRPF*PLEGGFQLSWCSCE Trigger: TTCACAAGAGCACCAGCTGAGCTGAAATCCCCCTTCCAGAGGGCAGAATGGTCTCATGCTCGCTTCTCCCAGTGGCTGGATGATCACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036862.5 ENSMUST00000218428.2 |
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| CDS-3UTR CAA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCAACTCCCTCCTTGCAGTaGTCCCTGGAGCCTCTTACT | + |
|
Preference number: 5 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSTPSLQ*SLEPLT Trigger: AGTAAGAGGCTCCAGGGACAACTGCAAGGAGGGAGT...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGGGCGTGATAGGGATTTaGAGAGATAAGCAGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLVQFLAIHHLALLSLDGGVIGI*RDKQPH Trigger: ATGAGGCTGCTTATCTCTCAAAATCCCTATCACGCC...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCCCTTGGGCAAGTTTaGCTAGTTGCTCAGCAATTA | + |
|
Preference number: 5 (lower is better) Translates to: GLVQFLAIHHLALLSLDGSLGQV*LVAQQL Trigger: TAATTGCTGAGCAACTAGCAAAACTTGCCCAAGGGA...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGATAAGTTTTTCCATATaGGTCCAGAGGGAAGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GLVQFLAIHHLALLSLDGISFSI*VQREAR Trigger: TCGGGCTTCCCTCTGGACCAATATGGAAAAACTTAT...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 90 bp | AATGGGATAAACTGGTGCAAATTCTTTACCGTCCCTGCTTCTCACTaGCTGAACATAAGCTTCCAGGGCTCCCCTGAGGAGGAGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NGINWCKFFTVPASH*LNISFQGSPEEEQP Trigger: AGGCTGCTCCTCCTCAGGGGAGCCCTGGAAGCTTATGTTCAGTCAGTGAGAAGCAGGGACGGTAAAGAATTTGCACCAGTTTATCCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036862.5 ENSMUST00000218428.2 |
||
| CDS CCA 90 bp | TGGCCTTTTCAGTCTGAACATGTCTTGTGTGTCGTCTTCCATGTGTaGGAGGTCCACACAGAGGTCAGGAGTCCCACTTGGACTGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: WPFQSEHVLCVVFHV*EVHTEVRSPTWTES Trigger: ACTTTCAGTCCAAGTGGGACTCCTGACCTCTGTGTGGACCTCCCACACATGGAAGACGACACACAAGACATGTTCAGACTGAAAAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | ATGTCCTCCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCGACTCTGAGCAGCTTTaGTTATCTCTCTACTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MSSLSDDDDLGWCNSWPSDSEQL*LSLYSL Trigger: GAGGGAGTAGAGAGATAACAAAAGCTGCTCAGAGTC...GGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGAGGAAAAACCAAGTaGATGGGATCGAAGAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFGGKTK*MGSKRR Trigger: ACGCCTCTTCGATCCCATCAACTTGGTTTTTCCTCC...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS TCA 90 bp | TTCCTGATGCATGGTGATGATTATGGCCTCGATCGCATCTGCCACTaGCGTCAGCAAGGGCTGTATGGCATTCCCCATAAGATCGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FLMHGDDYGLDRICH*RQQGLYGIPHKIVN Trigger: ATTCACGATCTTATGGGGAATGCCATACAGCCCTTGCTGACGTCAGTGGCAGATGCGATCGAGGCCATAATCATCACCATGCATCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGCTCAGCAATTACAGCTaGATGAATAGATTGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLVQFLAIHHLALLSLDGLSNYS*MNRLGS Trigger: ACTTCCCAATCTATTCATCAAGCTGTAATTGCTGAG...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCAACAGCAGCTACATaGAGTTCACTTGTTATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLVQFLAIHHLALLSLDGSTAAT*SSLVIV Trigger: GACTATAACAAGTGAACTCAATGTAGCTGCTGTTGA...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 90 bp | CATCAGAGGAAGGAGGATTACGTCCTCCCGGAGGAAAAACCAAGTTaGTGGGATCGAAGAGGCGTGATAGGGATTTTGAGAGATAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HQRKEDYVLPEEKPS*WDRRGVIGILRDKQ Trigger: CTGCTTATCTCTCAAAATCCCTATCACGCCTCTTCGATCCCATCAACTTGGTTTTTCCTCCGGGAGGACGTAATCCTCCTTCCTCTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGATAAATCTTCATGTCTaGCAACAACCTGTAGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLVQFLAIHHLALLSLDGINLHV*QQPVGV Trigger: TACACCTACAGGTTGTTGCAAGACATGAAGATTTAT...CCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGCACCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | CTTTACTCCCTCCGGCTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTAGCAGACATAGCCTTTaGAAGCAGCTGAACCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: LYSLRLLRQSKYFSSPAASRHSL*KQLNHN Trigger: ATTATGGTTCAGCTGCTTCAAAAGGCTATGTCTGCT...AGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGTAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218428.2 |
||
| CDS CCA 90 bp | GTTGGATTCTGGGTCTCCACACCTTGCTCCAGCAGACGCTTAGCTTaGTTTTCCACTTCAAGTCGAGCTCTTGCAATAAAGAGTAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: VGFWVSTPCSSRRLA*FSTSSRALAIKSRS Trigger: TGATCTACTCTTTATTGCAAGAGCTCGACTTGAAGTGGAAAACCAAGCTAAGCGTCTGCTGGAGCAAGGTGTGGAGACCCAGAATCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTTTGGACGGGTCTGTTCAAAGTTCAATGGCTCTTaGGGCAATAGCTTCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AIPGHPPFGTAFFGRVCSKFNGS*GNSFSV Trigger: AACACTGAAGCTATTGCCCAAAGAGCCATTGAACTT...TGAACAGACCCGTCCAAAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | CCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTAGCAGACATAGCCTTTaGAAGCAGCTGAACCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: PCQMMMIWAGAIPGHPPFSRHSL*KQLNHN Trigger: ATTATGGTTCAGCTGCTTCAAAAGGCTATGTCTGCT...AAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCTGTTTTCTCTGTACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTAGGCAACCTGAAGTCTaGCCAGTTGTGCAGTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: KFLFSLYRQTVSQSQAFSRQPEV*PVVQYG Trigger: CCCGTACTGCACAACTGGCAAGACTTCAGGTTGCCT...AGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTACAGAGAAAACAGAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 90 bp | CATGTCTTGCAACAACCTGTAGGTGTAGTTCTTTATCCAGCTGACTaGTCCCTTGGGCAAGTTTTGCTAGTTGCTCAGCAATTACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HVLQQPVGVVLYPAD*SLGQVLLVAQQLQL Trigger: AAGCTGTAATTGCTGAGCAACTAGCAAAACTTGCCCAAGGGATCAGTCAGCTGGATAAAGAACTACACCTACAGGTTGTTGCAAGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 90 bp | TTATCTCTCTACTCCCTCCTTGCAGTTGTCCCTGGAGCCTCTTACTaGGATATAAGATGCGAATTATTCTCCGAAGCAAATCACAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSLYSLLAVVPGASY*DIRCELFSEANHRQ Trigger: TTGCCTGTGATTTGCTTCGGAGAATAATTCGCATCTTATATCTCAGTAAGAGGCTCCAGGGACAACTGCAAGGAGGGAGTAGAGAGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 90 bp | AATCTTTCAAAGCCTTTTCTGGATCATAATCTGGCCTTTTCAGTCTaGACATGTCTTGTGTGTCGTCTTCCATGTGTGGGAGGTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: NLSKPFLDHNLAFSV*TCLVCRLPCVGGPH Trigger: GTGTGGACCTCCCACACATGGAAGACGACACACAAGACATGTTCAGACTGAAAAGGCCAGATTATGATCCAGAAAAGGCTTTGAAAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS-3UTR CAA 90 bp | TACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCAGAAGACTCAATCCCAGTaGCTTGTGCCAATAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: YRQTVSQSQAFSVCPPCQKTQSQ*LVPINL Trigger: AAGATTTATTGGCACAAGCAACTGGGATTGAGTCTT...CTGACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS-3UTR CAA 90 bp | AAGTTTCTGTTTTCTCTGTACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTCTGAAGTCTTGCCAGTaGTGCAGTACGGGCTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: KFLFSLYRQTVSQSQAFSLKSCQ*CSTGYY Trigger: ATAGTAGCCCGTACTGCACAACTGGCAAGACTTCAG...AGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTACAGAGAAAACAGAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS-3UTR CAA 90 bp | AAGTTTCTGTTTTCTCTGTACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTCTGGCTTGCATCTCCTaGAGTAGAGAGAAGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KFLFSLYRQTVSQSQAFSLACIS*SREKLF Trigger: GAACAGCTTCTCTCTACTCAAGGAGATGCAAGCCAG...AGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTACAGAGAAAACAGAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS-3UTR CAA 90 bp | CTGTACAGGCAAACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCTCCCTGTCTTATGAGACTGGCATaGCGGATAAAAAGTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LYRQTVSQSQAFSVCPPCLMRLA*RIKSSM Trigger: CATTGAACTTTTTATCCGCAATGCCAGTCTCATAAG...ACAGGGAGGACATACAGAAAATGCCTGACTCTGACTCACTGTTTGCCTGTACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS-3UTR CAA 90 bp | CTATCATTATTCCACCAACTGATAAATGGATGCATATGCCAGGATTTCGTTGAAAGCAGACATAGCCTTTaGAAGCAGCTGAACCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLFHQLINGCICQDFVESRHSL*KQLNHN Trigger: ATTATGGTTCAGCTGCTTCAAAAGGCTATGTCTGCT...TTCAACGAAATCCTGGCATATGCATCCATTTATCAGTTGGTGGAATAATGATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218428.2 ENSMUST00000219837.2 |
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| CDS CCA 72 bp | GGTCCAGAGGGAAGCCCGAAAACCTGCTGTGCTTCCTaGAGTTGGCATGGCGGCTCGCCCAGGGCCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GPEGSPKTCCAS*SWHGGSPRASS Trigger: CGAGGAGGCCCTGGGCGAGCCGCCATGCCAACTCCAGGAAGCACAGCAGGTTTTCGGGCTTCCCTCTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS CAA 72 bp | AGAGGGAAGCCCGAAAACCTGCTGTGCTTCCTGGAGTaGGCATGGCGGCTCGCCCAGGGCCTCCTCGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RGKPENLLCFLE*AWRLAQGLLAQ Trigger: CTGTGCGAGGAGGCCCTGGGCGAGCCGCCATGCCAACTCCAGGAAGCACAGCAGGTTTTCGGGCTTCCCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS GCA 72 bp | GCATCCGATAGGACTTTCCCAGATCCGACACTCGCCTaGAAAGGGGGCCCACAGCCAACTCCATCTGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ASDRTFPDPTLA*KGGPQPTPSVQ Trigger: TTGCACAGATGGAGTTGGCTGTGGGCCCCCTTTGCAGGCGAGTGTCGGATCTGGGAAAGTCCTATCGGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS GCA 72 bp | ATCCAGCCACTGGGAGAAGCGAGCATGAGACCATTCTaGCCTCTGGAAGGGGGATTTCAGCTCAGCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: IQPLGEASMRPF*PLEGGFQLSWC Trigger: GCACCAGCTGAGCTGAAATCCCCCTTCCAGAGGGCAGAATGGTCTCATGCTCGCTTCTCCCAGTGGCTGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036862.5 ENSMUST00000218428.2 |
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| CDS TCA 72 bp | CGCCCAGGGCCTCCTCGCACAGCTGACTGGGAAGGCTaGGTCAAAACTTTGACGTCCAATGCATTGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RPGPPRTADWEG*VKTLTSNALLM Trigger: CATCAACAATGCATTGGACGTCAAAGTTTTGACTCAGCCTTCCCAGTCAGCTGTGCGAGGAGGCCCTGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS CCA 72 bp | CAGTCTGAACATGTCTTGTGTGTCGTCTTCCATGTGTaGGAGGTCCACACAGAGGTCAGGAGTCCCACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QSEHVLCVVFHV*EVHTEVRSPTW Trigger: CCAAGTGGGACTCCTGACCTCTGTGTGGACCTCCCACACATGGAAGACGACACACAAGACATGTTCAGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS TCA 72 bp | CATGGTGATGATTATGGCCTCGATCGCATCTGCCACTaGCGTCAGCAAGGGCTGTATGGCATTCCCCATAAG | + |
|
Preference number: 6 (lower is better) Translates to: HGDDYGLDRICH*RQQGLYGIPHK Trigger: CTTATGGGGAATGCCATACAGCCCTTGCTGACGTCAGTGGCAGATGCGATCGAGGCCATAATCATCACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS TCA 72 bp | AGTTCACCACACCCACATTTCTCTTCTGTCCTTCCGTaGGAGGTCCAATCACCTGGCTTGCATCTCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSPHPHFSSVLP*EVQSPGLHLLE Trigger: CTCAAGGAGATGCAAGCCAGGTGATTGGACCTCTCACGGAAGGACAGAAGAGAAATGTGGGTGTGGTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 72 bp | AACTGGTGCAAATTCTTTACCGTCCCTGCTTCTCACTaGCTGAACATAAGCTTCCAGGGCTCCCCTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NWCKFFTVPASH*LNISFQGSPEE Trigger: CTCCTCAGGGGAGCCCTGGAAGCTTATGTTCAGTCAGTGAGAAGCAGGGACGGTAAAGAATTTGCACCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036862.5 ENSMUST00000218428.2 |
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| CDS CCA 72 bp | GTTATGGAAAACCTGAAGAGCTGTTCCAACCTGAGTTaGATTCTGGGTCTCCACACCTTGCTCCAGCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: VMENLKSCSNLS*ILGLHTLLQQT Trigger: CGTCTGCTGGAGCAAGGTGTGGAGACCCAGAATCCAACTCAGGTTGGAACAGCTCTTCAGGTTTTCCATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS CAA 72 bp | TGTTCCAACCTGAGTTGGATTCTGGGTCTCCACACCTaGCTCCAGCAGACGCTTAGCTTGGTTTTCCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSNLSWILGLHT*LQQTLSLVFHF Trigger: GAAGTGGAAAACCAAGCTAAGCGTCTGCTGGAGCAAGGTGTGGAGACCCAGAATCCAACTCAGGTTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS CCA 72 bp | TGGGTCTCCACACCTTGCTCCAGCAGACGCTTAGCTTaGTTTTCCACTTCAAGTCGAGCTCTTGCAATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WVSTPCSSRRLA*FSTSSRALAIK Trigger: CTTTATTGCAAGAGCTCGACTTGAAGTGGAAAACCAAGCTAAGCGTCTGCTGGAGCAAGGTGTGGAGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS CCA 72 bp | CCATTCTGCCCTCTGGAAGGGGGATTTCAGCTCAGCTaGTGCTCTTGTGAACAGAAACTGAATGATGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: PFCPLEGGFQLS*CSCEQKLNDDA Trigger: AGCATCATCATTCAGTTTCTGTTCACAAGAGCACCAGCTGAGCTGAAATCCCCCTTCCAGAGGGCAGAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036862.5 ENSMUST00000218428.2 |
||
| CDS CAA 72 bp | CTGGGTCTCCACACCTTGCTCCAGCAGACGCTTAGCTaGGTTTTCCACTTCAAGTCGAGCTCTTGCAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: LGLHTLLQQTLS*VFHFKSSSCNK Trigger: TTTATTGCAAGAGCTCGACTTGAAGTGGAAAACCAAGCTAAGCGTCTGCTGGAGCAAGGTGTGGAGACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS CAA 72 bp | GAAGGAGGATTACGTCCTCCCGGAGGAAAAACCAAGTaGATGGGATCGAAGAGGCGTGATAGGGATTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: EGGLRPPGGKTK*MGSKRRDRDFE Trigger: CTCAAAATCCCTATCACGCCTCTTCGATCCCATCAACTTGGTTTTTCCTCCGGGAGGACGTAATCCTCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS CAA 90 bp | AGCCTTTTCTGGATCATAATCTGGCCTTTTCAGTCTGAACATGTCTaGTGTGTCGTCTTCCATGTGTGGGAGGTCCACACAGAGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLFWIIIWPFQSEHV*CVVFHVWEVHTEVR Trigger: CCTGACCTCTGTGTGGACCTCCCACACATGGAAGACGACACACAAGACATGTTCAGACTGAAAAGGCCAGATTATGATCCAGAAAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 72 bp | AAGGAGGATTACGTCCTCCCGGAGGAAAAACCAAGTTaGTGGGATCGAAGAGGCGTGATAGGGATTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KEDYVLPEEKPS*WDRRGVIGILR Trigger: TCTCAAAATCCCTATCACGCCTCTTCGATCCCATCAACTTGGTTTTTCCTCCGGGAGGACGTAATCCTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS CAA 90 bp | AGTCGCAGTTTCCCACCTTCACCAAGAGGTCTTATGAGACTGGCATaGCGGATAAAAAGTTCAATGGCTCTTTGGGCAATAGCTTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRSFPPSPRGLMRLA*RIKSSMALWAIASV Trigger: CACTGAAGCTATTGCCCAAAGAGCCATTGAACTTTTTATCCGCAATGCCAGTCTCATAAGACCTCTTGGTGAAGGTGGGAAACTGCGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS CAA 72 bp | TGGATCATAATCTGGCCTTTTCAGTCTGAACATGTCTaGTGTGTCGTCTTCCATGTGTGGGAGGTCCACACA | + |
|
Preference number: 6 (lower is better) Translates to: WIIIWPFQSEHV*CVVFHVWEVHT Trigger: TGTGTGGACCTCCCACACATGGAAGACGACACACAAGACATGTTCAGACTGAAAAGGCCAGATTATGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 72 bp | CAACAACCTGTAGGTGTAGTTCTTTATCCAGCTGACTaGTCCCTTGGGCAAGTTTTGCTAGTTGCTCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QQPVGVVLYPAD*SLGQVLLVAQQ Trigger: TTGCTGAGCAACTAGCAAAACTTGCCCAAGGGATCAGTCAGCTGGATAAAGAACTACACCTACAGGTTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS CAA 72 bp | CCGAAGCAAATCACAGGCAACCTGAAGTCTTGCCAGTaGTGCAGTACGGGCTACTATTTTATTGTATGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PKQITGNLKSCQ*CSTGYYFIVWF Trigger: GAACCATACAATAAAATAGTAGCCCGTACTGCACAACTGGCAAGACTTCAGGTTGCCTGTGATTTGCTTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
||
| CDS TCA 72 bp | TACTCCCTCCTTGCAGTTGTCCCTGGAGCCTCTTACTaGGATATAAGATGCGAATTATTCTCCGAAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: YSLLAVVPGASY*DIRCELFSEAN Trigger: ATTTGCTTCGGAGAATAATTCGCATCTTATATCTCAGTAAGAGGCTCCAGGGACAACTGCAAGGAGGGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS TCA 72 bp | AAGCCTTTTCTGGATCATAATCTGGCCTTTTCAGTCTaGACATGTCTTGTGTGTCGTCTTCCATGTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: KPFLDHNLAFSV*TCLVCRLPCVG Trigger: TCCCACACATGGAAGACGACACACAAGACATGTTCAGACTGAAAAGGCCAGATTATGATCCAGAAAAGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS CAA 72 bp | TTCCCACCTTCACCAAGAGGTCTTATGAGACTGGCATaGCGGATAAAAAGTTCAATGGCTCTTTGGGCAATA | + |
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Preference number: 6 (lower is better) Translates to: FPPSPRGLMRLA*RIKSSMALWAI Trigger: TATTGCCCAAAGAGCCATTGAACTTTTTATCCGCAATGCCAGTCTCATAAGACCTCTTGGTGAAGGTGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS GCA 72 bp | AAGCAAATCACAGGCAACCTGAAGTCTTGCCAGTTGTaGAGTACGGGCTACTATTTTATTGTATGGTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: KQITGNLKSCQL*STGYYFIVWFN Trigger: GTTGAACCATACAATAAAATAGTAGCCCGTACTGCACAACTGGCAAGACTTCAGGTTGCCTGTGATTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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| CDS CCA 72 bp | TTTGTTATCTCTCTACTCCCTCCTTGCAGTTGTCCCTaGAGCCTCTTACTGAGATATAAGATGCGAATTATT | + |
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Preference number: 6 (lower is better) Translates to: FVISLLPPCSCP*SLLLRYKMRII Trigger: AATAATTCGCATCTTATATCTCAGTAAGAGGCTCCAGGGACAACTGCAAGGAGGGAGTAGAGAGATAACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036862.5 |
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