Pregenerated sensors for COG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031753Ensembl transcript IDs: ENSMUST00000034203.17, ENSMUST00000165867.8, ENSMUST00000172542.2, ENSMUST00000172668.8, ENSMUST00000172897.2, ENSMUST00000174165.8, ENSMUST00000174398.8, ENSMUST00000174679.2, ENSMUST00000174723.8
Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCAGCTGTCAAACTTGGCCTGGGCCTGTTCCCCTCCAATGCCCTaGCTGAAGAGCTTGGTGCAGTCACTCAGGAAGGACAGCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: RQLSNLAWACSPPMP*LKSLVQSLRKDSLA Trigger: AGCCAAGCTGTCCTTCCTGAGTGACTGCACCAAGCTCTTCAGTCAGGGCATTGGAGGGGAACAGGCCCAGGCCAAGTTTGACAGCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR TCA 90 bp | AGCTGTCAAACTTGGCCTGGGCCTGTTCCCCTCCAATGCCCTGACTaGAGAGCTTGGTGCAGTCACTCAGGAAGGACAGCTTGGCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SCQTWPGPVPLQCPD*RAWCSHSGRTAWLH Trigger: ATGAAGCCAAGCTGTCCTTCCTGAGTGACTGCACCAAGCTCTTCAGTCAGGGCATTGGAGGGGAACAGGCCCAGGCCAAGTTTGACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR GCA 90 bp | AGAGCTTGGTGCAGTCACTCAGGAAGGACAGCTTGGCTTCATCAGTaGTCTCGATGCCTTTGGTGTCAAACTTGCCCTGCTGGAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: RAWCSHSGRTAWLHQ*SRCLWCQTCPAGGC Trigger: GCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGAGTGACTGCACCAAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR CCA 90 bp | GTCATGGGCATGTGTGTTGTAGTGTGCGGGCGAGAGAGTAACAGATaGCCAGGCATATGCTGCCCACTTAGTCCCCACCTCTCTGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: VMGMCVVVCGRESNR*PGICCPLSPHLSVG Trigger: TCCAACAGAGAGGTGGGGACTAAGTGGGCAGCATATGCCTGGCCATCTGTTACTCTCTCGCCCGCACACTACAACACACATGCCCATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
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| 3UTR GCA 90 bp | TTAGCCTCCAGCCGTAACTGCTCCTGGGAAGAACTTTGCAGTGAGTaGACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: LASSRNCSWEELCSE*TPCFLVSMQWCSLD Trigger: GTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCTGGAGGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
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| 3UTR GCA 90 bp | ATGCTGTGCGAGACTGAGAGAAAAGTGTTGATCCAAGGTTGCACCTaGGGCTTGACTGCTGAACTGTTGAGCTCCGCCAACCCTTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: MLCETERKVLIQGCT*GLTAELLSSANPSC Trigger: GCAGGAAGGGTTGGCGGAGCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAGTCTCGCACAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR GCA 90 bp | TCCTCGATGCTGTGCGAGACTGAGAGAAAAGTGTTGATCCAAGGTTaGACCTGCGGCTTGACTGCTGAACTGTTGAGCTCCGCCAACCCT | + |
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Preference number: 1 (lower is better) Translates to: SSMLCETERKVLIQG*TCGLTAELLSSANP Trigger: AGGGTTGGCGGAGCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAGTCTCGCACAGCATCGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR TCA 90 bp | GTCTCGGATGGTCCAGGTTGTCACAGTGGTAAGGTAAGCAATGAGTaGCCGGAGTTCCTTGTCAAACTGCAGACCGCCCAGCCTGTTGAA | + |
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Preference number: 1 (lower is better) Translates to: VSDGPGCHSGKVSNE*PEFLVKLQTAQPVE Trigger: TTCAACAGGCTGGGCGGTCTGCAGTTTGACAAGGAACTCCGGTCACTCATTGCTTACCTTACCACTGTGACAACCTGGACCATCCGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR GCA 90 bp | CTCTCCCTTTTAGCCTCCAGCCGTAACTGCTCCTGGGAAGAACTTTaGAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: LSLLASSRNCSWEEL*SECTPCFLVSMQWC Trigger: ACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCTGGAGGCTAAAAGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
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| 3UTR TCA 90 bp | TCTAGTATCTCAGTCACCCGCTCTAGGTTAAGGATTGTAGCCATCTaGGAGAGGCGGGCGAACTTGTCTCGGATGGTCCAGGTTGTCACA | + |
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Preference number: 1 (lower is better) Translates to: SSISVTRSRLRIVAI*ERRANLSRMVQVVT Trigger: TGTGACAACCTGGACCATCCGAGACAAGTTCGCCCGCCTCTCTCAGATGGCTACAATCCTTAACCTAGAGCGGGTGACTGAGATACTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR GCA 90 bp | ACCTCTCTGTTGGAAAAGCTCTCCCTTTTAGCCTCCAGCCGTAACTaGTCCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: TSLLEKLSLLASSRN*SWEELCSECTPCFL Trigger: CAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCTGGAGGCTAAAAGGGAGAGCTTTTCCAACAGAGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
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| 3UTR TCA 90 bp | ATCAATCATGCTTCCTTCTTTGCCTTGTCGGCTGAGCTCAATGACTaGCTTGTCCAGGCACAAGTAACGATGAATGTGGGCTGCAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: INHASFFALSAELND*LVQAQVTMNVGCSL Trigger: CAGGCTGCAGCCCACATTCATCGTTACTTGTGCCTGGACAAGTCAGTCATTGAGCTCAGCCGACAAGGCAAAGAAGGAAGCATGATTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 ENSMUST00000174723.8 |
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| 3UTR CCA 90 bp | TCATGTAAACCCAGCAGTGGGAAGATCTTGAAGAATCGCTCCACCTaGGGCAAATCACCTTCTTTGGTAGCGATAGCAAACTTCTCTGCG | + |
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Preference number: 1 (lower is better) Translates to: SCKPSSGKILKNRST*GKSPSLVAIANFSA Trigger: CGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTGCCCCAGGTGGAGCGATTCTTCAAGATCTTCCCACTGCTGGGTTTACATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172897.2 |
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| 3UTR GCA 90 bp | TTGGTAGCGATAGCAAACTTCTCTGCGACTATGGCCTTAAGACGTTaGTCAGCTTCCTGCAGTAATTTCAGGTTGGCATCAATCATGCTT | + |
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Preference number: 1 (lower is better) Translates to: LVAIANFSATMALRR*SASCSNFRLASIML Trigger: AAGCATGATTGATGCCAACCTGAAATTACTGCAGGAAGCTGAGCAACGTCTTAAGGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174723.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGACCGGAGTTCCTTGTCAAACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTCCCCTCCAATGCCCTaGCTGAAGAGCTTGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SDRSSLSNCRPPSLLKVDSPPMP*LKSLVQ Trigger: CTGCACCAAGCTCTTCAGTCAGGGCATTGGAGGGGA...ATCCACCTTCAACAGGCTGGGCGGTCTGCAGTTTGACAAGGAACTCCGGTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTCGCACTTCAGCAGGGGTGAGGCGCCATGTCAAAGGGCCAGAGTTAGCAAGTTCCTTGTCAAACTaGAGACCGCCCAGCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: TCRTSAGVRRHVKGPELASSLSN*RPPSLL Trigger: CAACAGGCTGGGCGGTCTGCAGTTTGACAAGGAACT...TGCTAACTCTGGCCCTTTGACATGGCGCCTCACCCCTGCTGAAGTGCGACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTAGAAAACAGGTCCTaGAGTCTGGCGGGCCACATG | + |
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Preference number: 2 (lower is better) Translates to: AVSALLASWFPCSGVAWTLENRS*SLAGHM Trigger: CATGTGGCCCGCCAGACTTCAGGACCTGTTTTCTAA...GGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGTGTGCGAGAGAGTAACAGATaGCCAGGCATATGCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: VPRYLQPPCCHGHVCCSVRESNR*PGICCP Trigger: TGGGCAGCATATGCCTGGCCATCTGTTACTCTCTCG...CACACTACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGCCTTGAACTCTGCCATCTGCTGTTCCAGGTTGAGGATGAATTGCTGTGGCAGCTGTCAAACTTaGCCTGGGCCTGTTCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: RLALNSAICCSRLRMNCCGSCQT*PGPVPL Trigger: GAGGGGAACAGGCCCAGGCCAAGTTTGACAGCTGCC...ACAGCAATTCATCCTCAACCTGGAACAGCAGATGGCAGAGTTCAAGGCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR CAA 90 bp | TGCGAGACTGAGAGAAAAGTGTTGATCCAAGGTTGCACCTGCGGCTaGACTGCTGAACTGTTGAGCTCCGCCAACCCTTCCTGCAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CETERKVLIQGCTCG*TAELLSSANPSCKR Trigger: CCTCTTGCAGGAAGGGTTGGCGGAGCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAGTCTCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGACTGAAGAGCTTGGTGCAGTCACTCAGGAAGGACAGCTTGGCTTCATCCTTTGGTGTCAAACTTaGCCTGCTGGAGGCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: ALTEELGAVTQEGQLGFILWCQT*PAGGCC Trigger: ACAGCAGCCTCCAGCAGGGCAAGTTTGACACCAAAG...GATGAAGCCAAGCTGTCCTTCCTGAGTGACTGCACCAAGCTCTTCAGTCAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTCGCACTTCAGCAGGGGTGAGGCGCCATGTCAAAGGGCCAGAGTTAGCATTGAACTCTGCCATCTaGTGTTCCAGGTTGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: TCRTSAGVRRHVKGPELALNSAI*CSRLRM Trigger: CATCCTCAACCTGGAACAGCAGATGGCAGAGTTCAA...TGCTAACTCTGGCCCTTTGACATGGCGCCTCACCCCTGCTGAAGTGCGACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGTGTGAGCCGTAACTGCTCCTaGGAAGAACTTTGCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: VPRYLQPPCCHGHVCCSVSRNCS*EELCSE Trigger: CTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCT...CACACTACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
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| 3UTR CAA 90 bp | TCACTCAGGAAGGACAGCTTGGCTTCATCAGTGCTCTCGATGCCTTaGGTGTCAAACTTGCCCTGCTGGAGGCTGCTGTGCATGATGTTC | + |
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Preference number: 2 (lower is better) Translates to: SLRKDSLASSVLSMP*VSNLPCWRLLCMMF Trigger: GAACATCATGCACAGCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGCCTTGAACTCTGCCATCTGCTGTTCCAGGTTGAGGATGAATTGCTGTCTCCAATGCCCTGACTaGAGAGCTTGGTGCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RLALNSAICCSRLRMNCCLQCPD*RAWCSH Trigger: GTGACTGCACCAAGCTCTTCAGTCAGGGCATTGGAG...ACAGCAATTCATCCTCAACCTGGAACAGCAGATGGCAGAGTTCAAGGCCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTTTCCAGTTAGGCTGTCATAGATaGCTGGGGACAGGCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KLQTAQPVEGGFQDHFFQLGCHR*LGTGWP Trigger: AGGCCAGCCTGTCCCCAGTCATCTATGACAGCCTAA...CTGGAAAAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCGAGACTGAGAGAAAAGTGTTGATCCAAGGTTGCACCTGCGGCTTGACTTGCTGGAGGCTGCTGTaGATGATGTTCACGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: LCETERKVLIQGCTCGLTCWRLL*MMFTAL Trigger: AAGTGCCGTGAACATCATGCACAGCAGCCTCCAGCA...AGTCAAGCCGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAGTCTCGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAAACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTTTCGTGTTGATCCAAGGTTaGACCTGCGGCTTGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: VKLQTAQPVEGGFQDHFFVLIQG*TCGLTA Trigger: AGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACAC...GAAAAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTTTCCAGTCAAACTTGCCCTGCTaGAGGCTGCTGTGCATGATG | + |
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Preference number: 2 (lower is better) Translates to: KLQTAQPVEGGFQDHFFQSNLPC*RLLCMM Trigger: CATCATGCACAGCAGCCTCCAGCAGGGCAAGTTTGA...CTGGAAAAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR CAA 90 bp | GCTGGCCTTGAACTCTGCCATCTGCTGTTCCAGGTTGAGGATGAATaGCTGTACCCAGGGGTCATTGGCCTCATAGTCGTTGAATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: AGLELCHLLFQVEDE*LYPGVIGLIVVEFF Trigger: GAAGAATTCAACGACTATGAGGCCAATGACCCCTGGGTACAGCAATTCATCCTCAACCTGGAACAGCAGATGGCAGAGTTCAAGGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTAATTTCAGGTTGGCATCAATCATGCTTCCTTCTTTGCCTTGTCGGCTGTTGGCCAGGTCAAGCTaGCGGACTTTGCTCGACACG | + |
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Preference number: 2 (lower is better) Translates to: CSNFRLASIMLPSLPCRLLARSS*RTLLDT Trigger: CGTGTCGAGCAAAGTCCGTCAGCTTGACCTGGCCAA...CAGCCGACAAGGCAAAGAAGGAAGCATGATTGATGCCAACCTGAAATTACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTTTCCAGCTGAGAGAAAAGTGTTaGTCCAAGGTTGCACCTGCG | + |
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Preference number: 2 (lower is better) Translates to: KLQTAQPVEGGFQDHFFQLREKC*SKVAPA Trigger: CGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAG...CTGGAAAAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGGATGAATTGCTGTACCCAGGGGTCATTGGCCTCATAGTCGTTGAATTCGTGTCAAACTTGCCCTaGTGGAGGCTGCTGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: VEDELLYPGVIGLIVVEFVSNLP*WRLLCM Trigger: CATGCACAGCAGCCTCCAGCAGGGCAAGTTTGACAC...GAATTCAACGACTATGAGGCCAATGACCCCTGGGTACAGCAATTCATCCTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR CCA 90 bp | AACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTTTCCAGTTGCTCTCGATGCCTTTaGTGTCAAACTTGCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: NCRPPSLLKVDFRTTFSSCSRCL*CQTCPA Trigger: AGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCA...ACTGGAAAAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCAAGAGGTCTCGAAATTTGTTGGACACAGCAGCTAAGTCAGAAAGGCAGCTGTCAAACTTGGCCTaGGCCTGTTCCCCTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: SCKRSRNLLDTAAKSERQLSNLA*ACSPPM Trigger: CATTGGAGGGGAACAGGCCCAGGCCAAGTTTGACAG...CTGCCTTTCTGACTTAGCTGCTGTGTCCAACAAATTTCGAGACCTCTTGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR CAA 90 bp | TTGAATTCTTCCTCCTCGATGCTGTGCGAGACTGAGAGAAAAGTGTaGATCCAAGGTTGCACCTGCGGCTTGACTGCTGAACTGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LNSSSSMLCETERKV*IQGCTCGLTAELLS Trigger: GCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAGTCTCGCACAGCATCGAGGAGGAAGAATTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATCACCTTCTTTGGTAGCGATAGCAAACTTCTCTGCGACTATGGCCTTAAGTTGGCCAGGTCAAGCTaGCGGACTTTGCTCGACACG | + |
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Preference number: 2 (lower is better) Translates to: QITFFGSDSKLLCDYGLKLARSS*RTLLDT Trigger: CGTGTCGAGCAAAGTCCGTCAGCTTGACCTGGCCAA...CTTAAGGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172897.2 |
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| 3UTR-3UTR TCA 90 bp | AACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTTTCCAGTGATGCTGTGCGAGACTaGGAGAAAAGTGTTGATCCA | + |
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Preference number: 2 (lower is better) Translates to: NCRPPSLLKVDFRTTFSSDAVRD*EKSVDP Trigger: TGGATCAACACTTTTCTCTCAGTCTCGCACAGCATC...ACTGGAAAAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR CAA 90 bp | GGGAAGATCTTGAAGAATCGCTCCACCTGGGGCAAATCACCTTCTTaGGTAGCGATAGCAAACTTCTCTGCGACTATGGCCTTAAGACGT | + |
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Preference number: 2 (lower is better) Translates to: GKILKNRSTWGKSPS*VAIANFSATMALRR Trigger: ACGTCTTAAGGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTGCCCCAGGTGGAGCGATTCTTCAAGATCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172897.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGATTTCAGGACCACTTTTTCCAGTTCAACAGCAACAAGGCTGGTCATGAGGTGGCCTCATAGTCGTTaGATTCTTCCTCCTCGATGC | + |
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Preference number: 2 (lower is better) Translates to: VDFRTTFSSSTATRLVMRWPHSR*ILPPRC Trigger: GCATCGAGGAGGAAGAATTCAACGACTATGAGGCCA...CCTCATGACCAGCCTTGTTGCTGTTGAACTGGAAAAAGTGGTCCTGAAATCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCAAGAGGTCTCGAAATTTGTTGGACACAGCAGCTAAGTCAGAAAGGCAGGCTTGGCTTCATCAGTaGTCTCGATGCCTTTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SCKRSRNLLDTAAKSERQAWLHQ*SRCLWC Trigger: ACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGC...CTGCCTTTCTGACTTAGCTGCTGTGTCCAACAAATTTCGAGACCTCTTGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCTTAAGACGTTGCTCAGCTTCCTGCAGTAATTTCAGGTTGGCATCAATCGCTGAGCTCAATGACTaGCTTGTCCAGGCACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: MALRRCSASCSNFRLASIAELND*LVQAQV Trigger: TACTTGTGCCTGGACAAGTCAGTCATTGAGCTCAGC...GATTGATGCCAACCTGAAATTACTGCAGGAAGCTGAGCAACGTCTTAAGGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174723.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCTTTGGTAGCGATAGCAAACTTCTCTGCGACTATGGCCTTAAGACGTTGACGATGAATGTGGGCTaGAGCCTGCTCATAATCCTC | + |
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Preference number: 2 (lower is better) Translates to: TFFGSDSKLLCDYGLKTLTMNVG*SLLIIL Trigger: GAGGATTATGAGCAGGCTGCAGCCCACATTCATCGT...CAACGTCTTAAGGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174723.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTTAAGACGTTGCTCAGCTTCCTGCAGTAATTTCAGGTTGGCATCAATCATGTTCCTCAAAGCAGTCTaGACTCCATCCATGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: ALRRCSASCSNFRLASIMFLKAV*TPSMQN Trigger: GTTCTGCATGGATGGAGTTCAGACTGCTTTGAGGAA...CATGATTGATGCCAACCTGAAATTACTGCAGGAAGCTGAGCAACGTCTTAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 ENSMUST00000174723.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGATTTCAGGACCACTTTTTCCAGTTCAACAGCAACAAGGCTGGTCATGAGGGGTCTCGAAATTTGTTaGACACAGCAGCTAAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VDFRTTFSSSTATRLVMRGLEIC*TQQLSQ Trigger: CTGACTTAGCTGCTGTGTCCAACAAATTTCGAGACC...CCTCATGACCAGCCTTGTTGCTGTTGAACTGGAAAAAGTGGTCCTGAAATCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGCTCAGCTTCCTGCAGTAATTTCAGGTTGGCATCAATCATGCTTCCTTCTTTCTGAACTCCATCCATaGAGAACTTCAGGTCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VAQLPAVISGWHQSCFLLSELHP*RTSGPR Trigger: TCTTGGACCTGAAGTTCTGCATGGATGGAGTTCAGA...AAGAAGGAAGCATGATTGATGCCAACCTGAAATTACTGCAGGAAGCTGAGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCGCAGAGCCAGCACCTGTCGCACTTCAGCAGGGGTGAGGCGCCATGTCAAAAGACCGCCCAGCCTGTaGAAGGTGGATTTCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: MRRASTCRTSAGVRRHVKRPPSL*KVDFRT Trigger: GGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCT...TTTGACATGGCGCCTCACCCCTGCTGAAGTGCGACAGGTGCTGGCTCTGCGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTCGCACTTCAGCAGGGGTGAGGCGCCATGTCAAAGGGCCAGAGTTAGCAAGTGACCGGAGTTCCTaGTCAAACTGCAGACCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TCRTSAGVRRHVKGPELASDRSS*SNCRPP Trigger: GGGCGGTCTGCAGTTTGACAAGGAACTCCGGTCACT...TGCTAACTCTGGCCCTTTGACATGGCGCCTCACCCCTGCTGAAGTGCGACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR TCA 72 bp | ACTTGGCCTGGGCCTGTTCCCCTCCAATGCCCTGACTaGAGAGCTTGGTGCAGTCACTCAGGAAGGACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TWPGPVPLQCPD*RAWCSHSGRTA Trigger: AGCTGTCCTTCCTGAGTGACTGCACCAAGCTCTTCAGTCAGGGCATTGGAGGGGAACAGGCCCAGGCCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR TCA 72 bp | TCAGTCACCCGCTCTAGGTTAAGGATTGTAGCCATCTaGGAGAGGCGGGCGAACTTGTCTCGGATGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVTRSRLRIVAI*ERRANLSRMVQ Trigger: CTGGACCATCCGAGACAAGTTCGCCCGCCTCTCTCAGATGGCTACAATCCTTAACCTAGAGCGGGTGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR GCA 72 bp | AACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGTGTaGGGGCGAGAGAGTAACAGATGGCCAGGCATATGC | + |
|
Preference number: 3 (lower is better) Translates to: NLPAVMGMCVVV*GRESNRWPGIC Trigger: GCATATGCCTGGCCATCTGTTACTCTCTCGCCCGCACACTACAACACACATGCCCATGACAGCAGGGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR GCA 72 bp | TCAGGAAGGACAGCTTGGCTTCATCAGTGCTCTCGATaGCTTTGGTGTCAAACTTGCCCTGCTGGAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGRTAWLHQCSR*LWCQTCPAGGC Trigger: GCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR CCA 72 bp | AGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTaGTGTAGCCTGGACCTTTGGCTGACCCAAGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SECTPCFLVSMQ*CSLDLWLTQAR Trigger: TCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR CCA 72 bp | AGGACAGCTTGGCTTCATCAGTGCTCTCGATGCCTTTaGTGTCAAACTTGCCCTGCTGGAGGCTGCTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RTAWLHQCSRCL*CQTCPAGGCCA Trigger: TGCACAGCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR TCA 72 bp | GGTCCAGGTTGTCACAGTGGTAAGGTAAGCAATGAGTaGCCGGAGTTCCTTGTCAAACTGCAGACCGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GPGCHSGKVSNE*PEFLVKLQTAQ Trigger: CTGGGCGGTCTGCAGTTTGACAAGGAACTCCGGTCACTCATTGCTTACCTTACCACTGTGACAACCTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTGGCCTTGAACTCTGCCATCTGCTGTTCCAGGTTGAGGATGAATTGCTGTGTGCTCTCGATGCCTTaGGTGTCAAACTTGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RLALNSAICCSRLRMNCCVLSMP*VSNLPC Trigger: GCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCAC...ACAGCAATTCATCCTCAACCTGGAACAGCAGATGGCAGAGTTCAAGGCCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTCAAACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTCTCAGGAAGGACAGCTaGGCTTCATCAGTGCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVKLQTAQPVEGGFQDHFLRKDS*ASSVLS Trigger: CGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGAG...AAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTTTGACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR GCA 72 bp | AGCCGTAACTGCTCCTGGGAAGAACTTTGCAGTGAGTaGACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRNCSWEELCSE*TPCFLVSMQWC Trigger: ACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR GCA 72 bp | TTAGCCTCCAGCCGTAACTGCTCCTGGGAAGAACTTTaGAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: LASSRNCSWEEL*SECTPCFLVSM Trigger: CATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCTGGAGGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR GCA 72 bp | TGCAGTCACTCAGGAAGGACAGCTTGGCTTCATCAGTaGTCTCGATGCCTTTGGTGTCAAACTTGCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CSHSGRTAWLHQ*SRCLWCQTCPA Trigger: AGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGAGTGACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR GCA 72 bp | GAGACTGAGAGAAAAGTGTTGATCCAAGGTTGCACCTaGGGCTTGACTGCTGAACTGTTGAGCTCCGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ETERKVLIQGCT*GLTAELLSSAN Trigger: GTTGGCGGAGCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR GCA 72 bp | CTGTGCGAGACTGAGAGAAAAGTGTTGATCCAAGGTTaGACCTGCGGCTTGACTGCTGAACTGTTGAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LCETERKVLIQG*TCGLTAELLSS Trigger: GGAGCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAGTCTCGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCCTCATTGCGGAAGTCTATGCGCAGAGCCAGCACCTGTCGCACTTCAGCAGAAGAGGTCTCGAAATTaGTTGGACACAGCAGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: YPHCGSLCAEPAPVALQQKRSRN*LDTAAK Trigger: CTTAGCTGCTGTGTCCAACAAATTTCGAGACCTCTT...CTGCTGAAGTGCGACAGGTGCTGGCTCTGCGCATAGACTTCCGCAATGAGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR TCA 72 bp | GCTTCCTTCTTTGCCTTGTCGGCTGAGCTCAATGACTaGCTTGTCCAGGCACAAGTAACGATGAATGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASFFALSAELND*LVQAQVTMNVG Trigger: GCCCACATTCATCGTTACTTGTGCCTGGACAAGTCAGTCATTGAGCTCAGCCGACAAGGCAAAGAAGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 ENSMUST00000174723.8 |
||
| 3UTR TCA 72 bp | GTCGTTGAATTCTTCCTCCTCGATGCTGTGCGAGACTaGGAGAAAAGTGTTGATCCAAGGTTGCACCTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: VVEFFLLDAVRD*EKSVDPRLHLR Trigger: CCGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAGTCTCGCACAGCATCGAGGAGGAAGAATTCAACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR CCA 72 bp | CCCAGCAGTGGGAAGATCTTGAAGAATCGCTCCACCTaGGGCAAATCACCTTCTTTGGTAGCGATAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PSSGKILKNRST*GKSPSLVAIAN Trigger: GTTTGCTATCGCTACCAAAGAAGGTGATTTGCCCCAGGTGGAGCGATTCTTCAAGATCTTCCCACTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172897.2 |
||
| 3UTR CCA 72 bp | CCGCCAACCCTTCCTGCAAGAGGTCTCGAAATTTGTTaGACACAGCAGCTAAGTCAGAAAGGCAGCTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PPTLPARGLEIC*TQQLSQKGSCQ Trigger: TTGACAGCTGCCTTTCTGACTTAGCTGCTGTGTCCAACAAATTTCGAGACCTCTTGCAGGAAGGGTTGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTCAAACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTATCTGCTGTTCCAGGTaGAGGATGAATTGCTGTACC | + |
|
Preference number: 3 (lower is better) Translates to: LVKLQTAQPVEGGFQDHFICCSR*RMNCCT Trigger: GGTACAGCAATTCATCCTCAACCTGGAACAGCAGAT...AAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTTTGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR GCA 72 bp | AATCCTCATTCCTCAAAGCAGTCTGAACTCCATCCATaGAGAACTTCAGGTCCAAGATGTCATCGGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NPHSSKQSELHP*RTSGPRCHRLS Trigger: AGAGAGCCGATGACATCTTGGACCTGAAGTTCTGCATGGATGGAGTTCAGACTGCTTTGAGGAATGAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 |
||
| 3UTR GCA 72 bp | CAAATCACCTTCTTTGGTAGCGATAGCAAACTTCTCTaGGACTATGGCCTTAAGACGTTGCTCAGCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QITFFGSDSKLL*DYGLKTLLSFL Trigger: CAGGAAGCTGAGCAACGTCTTAAGGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174723.8 |
||
| 3UTR GCA 72 bp | ATAGCAAACTTCTCTGCGACTATGGCCTTAAGACGTTaGTCAGCTTCCTGCAGTAATTTCAGGTTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: IANFSATMALRR*SASCSNFRLAS Trigger: TGATGCCAACCTGAAATTACTGCAGGAAGCTGAGCAACGTCTTAAGGCCATAGTCGCAGAGAAGTTTGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174723.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGATCTTGAAGAATCGCTCCACCTGGGGCAAATCACCTTCTTTGGTAGCGATATGCAGTAATTTCAGGTaGGCATCAATCATGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KILKNRSTWGKSPSLVAICSNFR*ASIMLP Trigger: AGGAAGCATGATTGATGCCAACCTGAAATTACTGCA...TATCGCTACCAAAGAAGGTGATTTGCCCCAGGTGGAGCGATTCTTCAAGATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172897.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTTGGGCACTTCAGCAGGGGTaGGGCGCCATGTCAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLDLWLTQARQFCIALWALQQG*GAMSKG Trigger: GCCCTTTGACATGGCGCCTCACCCCTGCTGAAGTGC...CCAAAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | GCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCGTGTCAAACTTGCCCTaGTGGAGGCTGCTGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AVSALLASWFPCSGVAWTVSNLP*WRLLCM Trigger: CATGCACAGCAGCCTCCAGCAGGGCAAGTTTGACAC...GGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR CAA 72 bp | ATCCAAGGTTGCACCTGCGGCTTGACTGCTGAACTGTaGAGCTCCGCCAACCCTTCCTGCAAGAGGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IQGCTCGLTAEL*SSANPSCKRSR Trigger: TCGAGACCTCTTGCAGGAAGGGTTGGCGGAGCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCAACCTTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGGCTGACCCAAGCCAGAGCAGTGGGAAGATCTTaGAGAATCGCTCCACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLVSMQWCSLDLWLTQARAVGRS*RIAPPG Trigger: CCCAGGTGGAGCGATTCTTCAAGATCTTCCCACTGC...TCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | CGAGAGAGTAACAGATGGCCAGGCATATGCTGCCCACTTAGTCCCCACCTCTCTGAGTATCCGCAAAGATaGCCGCAGCTCTCCGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RESNRWPGICCPLSPHLSEYPQR*PQLSDH Trigger: GTGATCGGAGAGCTGCGGTCATCTTTGCGGATACTC...AGAGAGGTGGGGACTAAGTGGGCAGCATATGCCTGGCCATCTGTTACTCTCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | ACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGGCTGACCACAGCTTCCAGCTCCTaGAGCTCTGTCAGAGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TPCFLVSMQWCSLDLWLTTASSS*SSVRER Trigger: TCGCTCTCTGACAGAGCTGCAGGAGCTGGAAGCTGT...GGTCAGCCAAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | GTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGTGTGGTGTTGATCCAAGGTTaGACCTGCGGCTTGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPRYLQPPCCHGHVCCSVVLIQG*TCGLTA Trigger: AGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACAC...CACACTACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACTGTCAAACTTGGCCTaGGCCTGTTCCCCTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FLVSMQWCSLDLWLTQARLSNLA*ACSPPM Trigger: CATTGGAGGGGAACAGGCCCAGGCCAAGTTTGACAG...TCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | GTTAAGTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTACTGTCAGAGAGCGAATaGGCTCGGTGGAGATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VKSPGTSNLPAVMGMCVVLSESE*ARWRFR Trigger: CCGAAATCTCCACCGAGCTCATTCGCTCTCTGACAG...TACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGACTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | GTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTTCCACGATGGGTTGGTaGGTTTCCACAATTCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSALLASWFPCSGVAWTFSTMGW*VSTIRA Trigger: CGCCCGAATTGTGGAAACTCACCAACCCATCGTGGA...AAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | GTTAAGTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGGAGGCTGCTGTGCATaGTGTTCACGGCACTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKSPGTSNLPAVMGMCVVGGCCA*CSRHLS Trigger: TGACAAGTGCCGTGAACATCATGCACAGCAGCCTCC...TACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGACTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | GTTAAGTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTACTCCAATGCCCTGACTaGAGAGCTTGGTGCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKSPGTSNLPAVMGMCVVLQCPD*RAWCSH Trigger: GTGACTGCACCAAGCTCTTCAGTCAGGGCATTGGAG...TACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGACTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | ATGCGCAGAGCCAGCACCTGTCGCACTTCAGCAGGGGTGAGGCGCCATGTCAAATCCAGGCACTTCTGGTaGTCTTGCTTTACTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRRASTCRTSAGVRRHVKSRHFW*SCFTSS Trigger: AGAAGAAGTAAAGCAAGAGCACCAGAAGTGCCTGGA...TTTGACATGGCGCCTCACCCCTGCTGAAGTGCGACAGGTGCTGGCTCTGCGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCGTAACTGCTCCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCAGTTCCTTGTCAAACTaGAGACCGCCCAGCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAVTAPGKNFAVSALLASSSLSN*RPPSLL Trigger: CAACAGGCTGGGCGGTCTGCAGTTTGACAAGGAACT...GGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | GCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTGCTCTCGATGCCTTTaGTGTCAAACTTGCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVSALLASWFPCSGVAWTCSRCL*CQTCPA Trigger: AGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCA...GGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR CAA 72 bp | GAGAGAAAAGTGTTGATCCAAGGTTGCACCTGCGGCTaGACTGCTGAACTGTTGAGCTCCGCCAACCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERKVLIQGCTCG*TAELLSSANPS Trigger: GGAAGGGTTGGCGGAGCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACACTTTTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGAACTTCAGGTCCAAGATGTCATCGGCTCTCTGAATGGCCTGATAGAGGCCTGTCAGAGAGCGAATaGGCTCGGTGGAGATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CRTSGPRCHRLSEWPDRGLSESE*ARWRFR Trigger: CCGAAATCTCCACCGAGCTCATTCGCTCTCTGACAG...GCCTCTATCAGGCCATTCAGAGAGCCGATGACATCTTGGACCTGAAGTTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCCCATCCTGTGGAGAGTaGCCATCTTACTTTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: AVSALLASWFPCSGVAWTPSCGE*PSYFQW Trigger: CCATTGAAAGTAAGATGGTCACTCTCCACAGGATGG...GGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | GTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGTGTGTTCCTCAAAGCAGTCTaGACTCCATCCATGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPRYLQPPCCHGHVCCSVFLKAV*TPSMQN Trigger: GTTCTGCATGGATGGAGTTCAGACTGCTTTGAGGAA...CACACTACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | ACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGGCTGACCGCTGAGCTCAATGACTaGCTTGTCCAGGCACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPCFLVSMQWCSLDLWLTAELND*LVQAQV Trigger: TACTTGTGCCTGGACAAGTCAGTCATTGAGCTCAGC...GGTCAGCCAAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | CGAGAGAGTAACAGATGGCCAGGCATATGCTGCCCACTTAGTCCCCACCTCTCTTTGCTTTACTTCTTCTaGAGCCATGGAGTCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RESNRWPGICCPLSPHLSLLYFF*SHGVPH Trigger: GTGGGGGACTCCATGGCTTCAGAAGAAGTAAAGCAA...AGAGAGGTGGGGACTAAGTGGGCAGCATATGCCTGGCCATCTGTTACTCTCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | GTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTCTCTGGTGGCAAGGTTaGTCATGGCACAGAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSALLASWFPCSGVAWTFLWWQG*SWHRDS Trigger: ACTGTCTCTGTGCCATGATCAACCTTGCCACCAGAG...AAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | AGCTTGGTGCAGTCACTCAGGAAGGACAGCTTGGCTTCATCAGTGCTCTCGATGCTCTGGTGGCAAGGTTaGTCATGGCACAGAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLVQSLRKDSLASSVLSMLWWQG*SWHRDS Trigger: ACTGTCTCTGTGCCATGATCAACCTTGCCACCAGAG...CATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGAGTGACTGCACCAAGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGGCTGACCTGGCCTCATAGTCGTTaGATTCTTCCTCCTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TPCFLVSMQWCSLDLWLTWPHSR*ILPPRC Trigger: GCATCGAGGAGGAAGAATTCAACGACTATGAGGCCA...GGTCAGCCAAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | TGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTTGGCAACAAGGCTGGTCATaGGGCCGGTTAGGCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSLDLWLTQARQFCIALWQQGWS*GRLGCH Trigger: ATGACAGCCTAACCGGCCTCATGACCAGCCTTGTTG...CCAAAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | CGAGAGAGTAACAGATGGCCAGGCATATGCTGCCCACTTAGTCCCCACCTCTCTATAGGCGCAGCCTCTTaGTATCCTCATTGCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RESNRWPGICCPLSPHLSIGAAS*YPHCGS Trigger: ACTTCCGCAATGAGGATATCAAGAGGCTGCGCCTAT...AGAGAGGTGGGGACTAAGTGGGCAGCATATGCCTGGCCATCTGTTACTCTCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | CGAGAGAGTAACAGATGGCCAGGCATATGCTGCCCACTTAGTCCCCACCTCTCTTCCAGCCAGTTGCTTTaGGTCTCCCTCAATCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RESNRWPGICCPLSPHLSSSQLL*VSLNQL Trigger: CAGTTGATTGAGGGAGACGCAAAGCAACTGGCTGGA...AGAGAGGTGGGGACTAAGTGGGCAGCATATGCCTGGCCATCTGTTACTCTCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTTGCTGGAGGCTGCTGTaGATGATGTTCACGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VSALLASWFPCSGVAWTFCWRLL*MMFTAL Trigger: AAGTGCCGTGAACATCATGCACAGCAGCCTCCAGCA...AAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGCTGGCCTTGAACTCTaGCATCTGCTGTTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VKSPGTSNLPAVMGMCVVAGLEL*HLLFQV Trigger: AACCTGGAACAGCAGATGGCAGAGTTCAAGGCCAGC...TACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGACTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR CAA 72 bp | CTGAAGAGCTTGGTGCAGTCACTCAGGAAGGACAGCTaGGCTTCATCAGTGCTCTCGATGCCTTTGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSLVQSLRKDS*ASSVLSMPLVS Trigger: TGACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGAGTGACTGCACCAAGCTCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR CAA 72 bp | AGCTCCGCCAACCCTTCCTGCAAGAGGTCTCGAAATTaGTTGGACACAGCAGCTAAGTCAGAAAGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSANPSCKRSRN*LDTAAKSERQL Trigger: CAGCTGCCTTTCTGACTTAGCTGCTGTGTCCAACAAATTTCGAGACCTCTTGCAGGAAGGGTTGGCGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| 3UTR CAA 72 bp | TCCTCCTCGATGCTGTGCGAGACTGAGAGAAAAGTGTaGATCCAAGGTTGCACCTGCGGCTTGACTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSMLCETERKV*IQGCTCGLTAE Trigger: TTCAGCAGTCAAGCCGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAGTCTCGCACAGCATCGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTGGTGCAGTCACTCAGGAAGGACAGCTTGGCTTCATCAGTGCTCTCGATGTTGCTTTACTTCTTCTaGAGCCATGGAGTCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLVQSLRKDSLASSVLSMLLYFF*SHGVPH Trigger: GTGGGGGACTCCATGGCTTCAGAAGAAGTAAAGCAA...CATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGAGTGACTGCACCAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTCAATAGGCAGTTATTaGGGAGTTTGTCCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: AVSALLASWFPCSGVAWTSIGSY*GVCPGT Trigger: AGTGCCTGGACAAACTCCTCAATAACTGCCTATTGA...GGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | CCAGCCGTAACTGCTCCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCCGTTGCTCAGCTTCCTaGAGTAATTTCAGGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAVTAPGKNFAVSALLASRCSAS*SNFRLA Trigger: TGCCAACCTGAAATTACTGCAGGAAGCTGAGCAACG...GGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | GTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGTGTGATGGCCTTAAGACGTTaGTCAGCTTCCTGCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPRYLQPPCCHGHVCCSVMALRR*SASCSN Trigger: ATTACTGCAGGAAGCTGAGCAACGTCTTAAGGCCAT...CACACTACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGCTTGGCTTCATCAGTaGTCTCGATGCCTTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSALLASWFPCSGVAWTFAWLHQ*SRCLWC Trigger: ACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGC...AAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTATCCTCCTCGATGCTGTaGGAGACTGAGAGAAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKSPGTSNLPAVMGMCVVSSSML*ETERKV Trigger: CACTTTTCTCTCAGTCTCGCACAGCATCGAGGAGGA...TACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGACTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | TTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGGCTGACCCAAGCCAGATTGAACTCTGCCATCTaGTGTTCCAGGTTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLVSMQWCSLDLWLTQARLNSAI*CSRLRM Trigger: CATCCTCAACCTGGAACAGCAGATGGCAGAGTTCAA...TCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTTCAAACTTGCCCTGCTaGAGGCTGCTGTGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: PGKNFAVSALLASWFPCSSNLPC*RLLCMM Trigger: CATCATGCACAGCAGCCTCCAGCAGGGCAAGTTTGA...ACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTCCAGGAAGGACAGCTTaGCTTCATCAGTGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGKNFAVSALLASWFPCSPGRTA*LHQCSR Trigger: TCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGG...ACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | TGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTTGGGCTGTCATAGATGACTaGGGACAGGCTGGCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLDLWLTQARQFCIALWAVIDD*GQAGLE Trigger: TTCAAGGCCAGCCTGTCCCCAGTCATCTATGACAGC...CCAAAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | GGGCAAATCACCTTCTTTGGTAGCGATAGCAAACTTCTCTGCGACTATGGCCTTCTGTCAGAGAGCGAATaGGCTCGGTGGAGATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQITFFGSDSKLLCDYGLLSESE*ARWRFR Trigger: CCGAAATCTCCACCGAGCTCATTCGCTCTCTGACAG...AAGGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174723.8 |
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| CDS-3UTR TCA 90 bp | CACCTGGGGCAAATCACCTTCTTTGGTAGCGATAGCAAACTTCTCTGCGACTATCTGTCAGAGAGCGAATaGGCTCGGTGGAGATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLGQITFFGSDSKLLCDYLSESE*ARWRFR Trigger: CCGAAATCTCCACCGAGCTCATTCGCTCTCTGACAG...ATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTGCCCCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174723.8 |
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| CDS-3UTR TCA 90 bp | TCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTACCTCCAACCTTGGCCAGGTCAAGCTaGCGGACTTTGCTCGACACG | + |
|
Preference number: 4 (lower is better) Translates to: SLFVNIIALPLSPQVPPTLARSS*RTLLDT Trigger: CGTGTCGAGCAAAGTCCGTCAGCTTGACCTGGCCAA...GGTTGGAGGTACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
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| CDS-3UTR TCA 90 bp | TGCACCTGCGGCTTGACTGCTGAACTGTTGAGCTCCGCCAACCCTTCCTGCAAGGCCCAATGCACTTTTTaGCAATGTAGAAGACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTCGLTAELLSSANPSCKAQCTF*QCRRHH Trigger: ATGATGTCTTCTACATTGTCAAAAAGTGCATTGGGC...CTTGCAGGAAGGGTTGGCGGAGCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
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| CDS-3UTR TCA 90 bp | CCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTTCCCCTCCAATGCCCTaGCTGAAGAGCTTGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGSVFICEHHSLAVKSPGSPPMP*LKSLVQ Trigger: CTGCACCAAGCTCTTCAGTCAGGGCATTGGAGGGGA...ACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | GTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGATGCTGTGCGAGACTaGGAGAAAAGTGTTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSALLASWFPCSGVAWTFDAVRD*EKSVDP Trigger: TGGATCAACACTTTTCTCTCAGTCTCGCACAGCATC...AAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
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| CDS-3UTR GCA 90 bp | CCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTACGATGAATGTGGGCTaGAGCCTGCTCATAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKNFAVSALLASWFPCSTMNVG*SLLIIL Trigger: GAGGATTATGAGCAGGCTGCAGCCCACATTCATCGT...ACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGCAGCTGTCAAACTTaGCCTGGGCCTGTTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGSVFICEHHSLAVKSPGSCQT*PGPVPL Trigger: GAGGGGAACAGGCCCAGGCCAAGTTTGACAGCTGCC...TGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR CAA 72 bp | GAACTCTGCCATCTGCTGTTCCAGGTTGAGGATGAATaGCTGTACCCAGGGGTCATTGGCCTCATAGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELCHLLFQVEDE*LYPGVIGLIVV Trigger: AACGACTATGAGGCCAATGACCCCTGGGTACAGCAATTCATCCTCAACCTGGAACAGCAGATGGCAGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTCCGATCACTCATGTCTaGGCCCAGCACCAACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PGSVFICEHHSLAVKSPGPITHV*AQHQQQ Trigger: CTGTTGTTGGTGCTGGGCTCAGACATGAGTGATCGG...ACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | TATAGGCGCAGCCTCTTGATATCCTCATTGCGGAAGTCTATGCGCAGAGCCAGCTCAATAGGCAGTTATTaGGGAGTTTGTCCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: YRRSLLISSLRKSMRRASSIGSY*GVCPGT Trigger: AGTGCCTGGACAAACTCCTCAATAACTGCCTATTGA...GCTGGCTCTGCGCATAGACTTCCGCAATGAGGATATCAAGAGGCTGCGCCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGGACAGGCTGGCCTTaGACTCTGCCATCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGSVFICEHHSLAVKSPGTGWP*TLPSAV Trigger: AACAGCAGATGGCAGAGTTCAAGGCCAGCCTGTCCC...TGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | CCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTTTAGGCTGTCATAGATaGCTGGGGACAGGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGSVFICEHHSLAVKSPGLGCHR*LGTGWP Trigger: AGGCCAGCCTGTCCCCAGTCATCTATGACAGCCTAA...ACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | TCCTGCAGTAATTTCAGGTTGGCATCAATCATGCTTCCTTCTTTGCCTTGTCGGACAGCTTCCAGCTCCTaGAGCTCTGTCAGAGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SCSNFRLASIMLPSLPCRTASSS*SSVRER Trigger: TCGCTCTCTGACAGAGCTGCAGGAGCTGGAAGCTGT...CCGACAAGGCAAAGAAGGAAGCATGATTGATGCCAACCTGAAATTACTGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 ENSMUST00000174723.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCCTTAAGACGTTGCTCAGCTTCCTGCAGTAATTTCAGGTTGGCATCAATCACAGCTTCCAGCTCCTaGAGCTCTGTCAGAGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MALRRCSASCSNFRLASITASSS*SSVRER Trigger: TCGCTCTCTGACAGAGCTGCAGGAGCTGGAAGCTGT...GATTGATGCCAACCTGAAATTACTGCAGGAAGCTGAGCAACGTCTTAAGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172897.2 ENSMUST00000174723.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTATCATTCCAGCCAGTTaGTTTGCGTCTCCCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: PGKNFAVSALLASWFPCSIIPAS*FASPSI Trigger: GATTGAGGGAGACGCAAAGCAACTGGCTGGAATGAT...ACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTAAGCCAATTAGCTCCTaGATGGTACAGCTCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSALLASWFPCSGVAWTFKPISS*MVQLNR Trigger: CCTATTGAGCTGTACCATGCAGGAGCTAATTGGCTT...AAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTACCTCCAACCCATTGCGGAAGTCTATaGGCAGAGCCAGCACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLFVNIIALPLSPQVPPTHCGSL*AEPAPV Trigger: GACAGGTGCTGGCTCTGCGCATAGACTTCCGCAATG...GGTTGGAGGTACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | GTGCAGTCACTCAGGAAGGACAGCTTGGCTTCATCAGTGCTCTCGATGCCTTTGTTGTCCAGGCACTTCTaGTGCTCTTGCTTTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSLRKDSLASSVLSMPLLSRHF*CSCFTS Trigger: AGAAGTAAAGCAAGAGCACCAGAAGTGCCTGGACAA...CAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGAGTGACTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTCTTGTCACCCCACGCTaGATGTCCTGTAAGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGSVFICEHHSLAVKSPGLVTPR*MSCKVV Trigger: CACCACCTTACAGGACATCCAGCGTGGGGTGACAAG...ACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | GTAGCGATAGCAAACTTCTCTGCGACTATGGCCTTAAGACGTTGCTCAGCTTCCGCGGTTCCCATCCTGTaGAGAGTGACCATCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VAIANFSATMALRRCSASAVPIL*RVTILL Trigger: AAGTAAGATGGTCACTCTCCACAGGATGGGAACCGC...GGAAGCTGAGCAACGTCTTAAGGCCATAGTCGCAGAGAAGTTTGCTATCGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174723.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAAGACGTTGCTCAGCTTCCTGCAGTAATTTCAGGTTGGCATCAATCATGCATCGGCTCTCTGAATaGCCTGATAGAGGCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALRRCSASCSNFRLASIMHRLSE*PDRGGS Trigger: GGAACCGCCTCTATCAGGCCATTCAGAGAGCCGATG...CATGATTGATGCCAACCTGAAATTACTGCAGGAAGCTGAGCAACGTCTTAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174723.8 |
||
| 3UTR CAA 72 bp | CTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTaGCCGTTAAGTCCCCAGGTACCTCCAACCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVVSLFVNIIA*PLSPQVPPTSL Trigger: CAGGGAGGTTGGAGGTACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR CAA 72 bp | TTGAAGAATCGCTCCACCTGGGGCAAATCACCTTCTTaGGTAGCGATAGCAAACTTCTCTGCGACTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKNRSTWGKSPS*VAIANFSATMA Trigger: GGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTGCCCCAGGTGGAGCGATTCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172897.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCGTAACTGCTCCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCGCCCAATGCACTTTTTaGCAATGTAGAAGACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PAVTAPGKNFAVSALLASAQCTF*QCRRHH Trigger: ATGATGTCTTCTACATTGTCAAAAAGTGCATTGGGC...GGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCCTGCAGTAATTTCAGGTTGGCATCAATCATGCTTCCTTCTTTGCCTTACAGCTTCCAGCTCCTaGAGCTCTGTCAGAGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QLPAVISGWHQSCFLLCLTASSS*SSVRER Trigger: TCGCTCTCTGACAGAGCTGCAGGAGCTGGAAGCTGT...AAGGCAAAGAAGGAAGCATGATTGATGCCAACCTGAAATTACTGCAGGAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 ENSMUST00000174723.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGATAGCAAACTTCTCTaGGACTATGGCCTTAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: PGKNFAVSALLASWFPCSDSKLL*DYGLKT Trigger: CGTCTTAAGGCCATAGTCGCAGAGAAGTTTGCTATC...ACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | AAACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTTTCCAGCACTTCTGGTGCTCTTaGTTTACTTCTTCTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLQTAQPVEGGFQDHFFQHFWCS*FTSSEA Trigger: GGCTTCAGAAGAAGTAAAGCAAGAGCACCAGAAGTG...CTGGAAAAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTTCCAGGCACTTCTGGTaGTCTTGCTTTACTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WCSLDLWLTQARQFCIALSRHFW*SCFTSS Trigger: AGAAGAAGTAAAGCAAGAGCACCAGAAGTGCCTGGA...AAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | AAACTGCAGACCGCCCAGCCTGTTGAAGGTGGATTTCAGGACCACTTTTTCCAGAAGCCAATTAGCTCCTaGATGGTACAGCTCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLQTAQPVEGGFQDHFFQKPISS*MVQLNR Trigger: CCTATTGAGCTGTACCATGCAGGAGCTAATTGGCTT...CTGGAAAAAGTGGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCTGCAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTTGGTTGTCCAGGCACTTCTaGTGCTCTTGCTTTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLDLWLTQARQFCIALWLSRHF*CSCFTS Trigger: AGAAGTAAAGCAAGAGCACCAGAAGTGCCTGGACAA...CCAAAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGATGTCCTGTAAGGTaGTGGCTGGGAAGCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGSVFICEHHSLAVKSPGCPVR*WLGSPF Trigger: GAATGGGCTTCCCAGCCACCACCTTACAGGACATCC...TGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTCTCGAAATTTGTTaGACACAGCAGCTAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGKNFAVSALLASWFPCSGLEIC*TQQLSQ Trigger: CTGACTTAGCTGCTGTGTCCAACAAATTTCGAGACC...ACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | CGAGAGAGTAACAGATGGCCAGGCATATGCTGCCCACTTAGTCCCCACCTCTCTGTGTCACATTCTACTTaGAGATATTTGATCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RESNRWPGICCPLSPHLSVSHST*RYLIRV Trigger: TACCCTGATCAAATATCTTCAAGTAGAATGTGACAC...AGAGAGGTGGGGACTAAGTGGGCAGCATATGCCTGGCCATCTGTTACTCTCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR TCA 90 bp | GGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTACCCTGAGAGAAAAGTGTTaGTCCAAGGTTGCACCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GSVFICEHHSLAVKSPGTLREKC*SKVAPA Trigger: CGCAGGTGCAACCTTGGATCAACACTTTTCTCTCAG...GGTACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | CCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTCTTTCAATGGTGTTCTaGTGTTCCAAAAGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PGKNFAVSALLASWFPCSLSMVF*CSKRAS Trigger: GGATGCTCTTTTGGAACAGCAGAACACCATTGAAAG...ACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCACTTTGGTGTCAAACTTaGCCTGCTGGAGGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGSVFICEHHSLAVKSPLWCQT*PAGGCC Trigger: ACAGCAGCCTCCAGCAGGGCAAGTTTGACACCAAAG...TGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCACATCGGCTCTCTGAATaGCCTGATAGAGGCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGSVFICEHHSLAVKSPHRLSE*PDRGGS Trigger: AGAACCGCCTCTATCAGGCCATTCAGAGAGCCGATG...TGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | TCCTGCAAGAGGTCTCGAAATTTGTTGGACACAGCAGCTAAGTCAGAAAGGCAGCTTCTTCTGAAGCCATaGAGTCCCCCACCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCKRSRNLLDTAAKSERQLLLKP*SPPPQN Trigger: ATTTTGAGGTGGGGGACTCCATGGCTTCAGAAGAAG...CTGCCTTTCTGACTTAGCTGCTGTGTCCAACAAATTTCGAGACCTCTTGCAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTACCTCCAACCGGTATTCCGAGAACTTaGTCAGGCCATCCTCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLFVNIIALPLSPQVPPTGIPRT*SGHPHV Trigger: TACATGAGGATGGCCTGAGCAAGTTCTCGGAATACC...GGTTGGAGGTACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | TCCATCCATGCAGAACTTCAGGTCCAAGATGTCATCGGCTCTCTGAATGGCCTGATTTCAATGGTGTTCTaGTGTTCCAAAAGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SIHAELQVQDVIGSLNGLISMVF*CSKRAS Trigger: GGATGCTCTTTTGGAACAGCAGAACACCATTGAAAT...CAGGCCATTCAGAGAGCCGATGACATCTTGGACCTGAAGTTCTGCATGGATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174165.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCTGGGACCCATCCTGTaGAGAGTGACCATCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: CLQVVSLFVNIIALPLSPLGPIL*RVTILL Trigger: AAGTAAGATGGTCACTCTCCACAGGATGGGTCCCAG...GGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | CCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTCTTCTTCTGAAGCCATaGAGTCCCCCACCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGSVFICEHHSLAVKSPGLLLKP*SPPPQN Trigger: ATTTTGAGGTGGGGGACTCCATGGCTTCAGAAGAAG...ACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTACCTCCAACCTCTGAACTCCATCCATaGAGAACTTCAGGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLFVNIIALPLSPQVPPTSELHP*RTSGPR Trigger: TCTTGGACCTGAAGTTCTGCATGGATGGAGTTCAGA...GGTTGGAGGTACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR GCA 90 bp | CCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTCACTTCTGGTGCTCTTaGTTTACTTCTTCTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSVFICEHHSLAVKSPGHFWCS*FTSSEA Trigger: GGCTTCAGAAGAAGTAAAGCAAGAGCACCAGAAGTG...ACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTCCATCTTACTTTCAATaGTGTTCTGCTGTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGKNFAVSALLASWFPCSPSYFQ*CSAVPK Trigger: TTTTGGAACAGCAGAACACCATTGAAAGTAAGATGG...ACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCAAGAATCGCTCCACCTaGGGCAAATCACCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLQVVSLFVNIIALPLSPKNRST*GKSPSL Trigger: CAAAGAAGGTGATTTGCCCCAGGTGGAGCGATTCTT...GGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| 3UTR CAA 72 bp | TTAAGACGTTGCTCAGCTTCCTGCAGTAATTTCAGGTaGGCATCAATCATGCTTCCTTCTTTGCCTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRCSASCSNFR*ASIMLPSLPCR Trigger: CCGACAAGGCAAAGAAGGAAGCATGATTGATGCCAACCTGAAATTACTGCAGGAAGCTGAGCAACGTCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172897.2 ENSMUST00000174165.8 ENSMUST00000174723.8 |
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| CDS-3UTR CCA 90 bp | TGTCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCGCAGTAATTTCAGGTTaGCATCAATCATGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLQVVSLFVNIIALPLSPAVISG*HQSCFL Trigger: AAGGAAGCATGATTGATGCCAACCTGAAATTACTGC...GGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CCA 90 bp | CAAATCACCTTCTTTGGTAGCGATAGCAAACTTCTCTGCGACTATGGCCTTAAGCCATCTTACTTTCAATaGTGTTCTGCTGTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QITFFGSDSKLLCDYGLKPSYFQ*CSAVPK Trigger: TTTTGGAACAGCAGAACACCATTGAAAGTAAGATGG...CTTAAGGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174723.8 |
||
| CDS TCA 90 bp | GTTCGTACACAGCTTCCAGCTCCTGCAGCTCTGTCAGAGAGCGAATaGGCTCGGTGGAGATTTCGGAGCAGTGTCCTCCTCCCACCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRTQLPAPAALSESE*ARWRFRSSVLLPPP Trigger: AGGGGGTGGGAGGAGGACACTGCTCCGAAATCTCCACCGAGCTCATTCGCTCTCTGACAGAGCTGCAGGAGCTGGAAGCTGTGTACGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000034203.17 ENSMUST00000172668.8 ENSMUST00000172897.2 ENSMUST00000174165.8 ENSMUST00000174398.8 ENSMUST00000174723.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCGGTTGCACCTGCGGCTaGACTGCTGAACTGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVSALLASWFPCSGVAWTGCTCG*TAELLS Trigger: GCTCAACAGTTCAGCAGTCAAGCCGCAGGTGCAACC...GGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | CGAGAGAGTAACAGATGGCCAGGCATATGCTGCCCACTTAGTCCCCACCTCTCTGAGAGGCGGGCGAACTaGTCTCGGATGGTCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RESNRWPGICCPLSPHLSERRAN*SRMVQV Trigger: AACCTGGACCATCCGAGACAAGTTCGCCCGCCTCTC...AGAGAGGTGGGGACTAAGTGGGCAGCATATGCCTGGCCATCTGTTACTCTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS TCA 90 bp | CGATGCCTTTGGTGTCAAACTTGCCCTGCTGGAGGCTGCTGTGCATaGTGTTCACGGCACTTGTCACCCCACGCTGGATGTCCTGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCLWCQTCPAGGCCA*CSRHLSPHAGCPVR Trigger: CCTTACAGGACATCCAGCGTGGGGTGACAAGTGCCGTGAACATCATGCACAGCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
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| CDS CCA 90 bp | GCTTCATCAGTGCTCTCGATGCCTTTGGTGTCAAACTTGCCCTGCTaGAGGCTGCTGTGCATGATGTTCACGGCACTTGTCACCCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSVLSMPLVSNLPC*RLLCMMFTALVTPR Trigger: GCGTGGGGTGACAAGTGCCGTGAACATCATGCACAGCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
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| CDS TCA 90 bp | AGGCAGCTGTCAAACTTGGCCTGGGCCTGTTCCCCTCCAATGCCCTaGCTGAAGAGCTTGGTGCAGTCACTCTCCAGAGTCTTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RQLSNLAWACSPPMP*LKSLVQSLSRVFFR Trigger: TCTGAAGAAGACTCTGGAGAGTGACTGCACCAAGCTCTTCAGTCAGGGCATTGGAGGGGAACAGGCCCAGGCCAAGTTTGACAGCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGTGTGAGCAGTGGGAAGATCTaGAAGAATCGCTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPRYLQPPCCHGHVCCSVSSGKI*KNRSTW Trigger: CCAGGTGGAGCGATTCTTCAAGATCTTCCCACTGCT...CACACTACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | GTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTAGACCGCCCAGCCTGTaGAAGGTGGATTTCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VSALLASWFPCSGVAWTFRPPSL*KVDFRT Trigger: GGTCCTGAAATCCACCTTCAACAGGCTGGGCGGTCT...AAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS TCA 90 bp | GAGAGTATCCGCAAAGATGACCGCAGCTCTCCGATCACTCATGTCTaGGCCCAGCACCAACAACAGATTCTCCTCAGCCTTACTGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: ESIRKDDRSSPITHV*AQHQQQILLSLTGD Trigger: GTCGCCAGTAAGGCTGAGGAGAATCTGTTGTTGGTGCTGGGCTCAGACATGAGTGATCGGAGAGCTGCGGTCATCTTTGCGGATACTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
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| CDS TCA 90 bp | AGCTGTCAAACTTGGCCTGGGCCTGTTCCCCTCCAATGCCCTGACTaGAGAGCTTGGTGCAGTCACTCTCCAGAGTCTTCTTCAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCQTWPGPVPLQCPD*RAWCSHSPESSSEL Trigger: CAACTCTGAAGAAGACTCTGGAGAGTGACTGCACCAAGCTCTTCAGTCAGGGCATTGGAGGGGAACAGGCCCAGGCCAAGTTTGACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 |
||
| CDS GCA 90 bp | TTGGCTTCATCAGTGCTCTCGATGCCTTTGGTGTCAAACTTGCCCTaGTGGAGGCTGCTGTGCATGATGTTCACGGCACTTGTCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LASSVLSMPLVSNLP*WRLLCMMFTALVTP Trigger: TGGGGTGACAAGTGCCGTGAACATCATGCACAGCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS GCA 90 bp | CCACATTGTTCAGAGTCACCAGGAAGGACAGCTTGGCTTCATCAGTaGTCTCGATGCCTTTGGTGTCAAACTTGCCCTGCTGGAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PHCSESPGRTAWLHQ*SRCLWCQTCPAGGC Trigger: GCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGGTGACTCTGAACAATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCGATCATTCCAGCCAGTaGCTTTGCGTCTCCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: AVSALLASWFPCSGVAWTDHSSQ*LCVSLN Trigger: ATTGAGGGAGACGCAAAGCAACTGGCTGGAATGATC...GGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | CCAGCCGTAACTGCTCCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCGCTTCCTTCTTTGCCTaGTCGGCTGAGCTCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: PAVTAPGKNFAVSALLASASFFA*SAELND Trigger: GTCATTGAGCTCAGCCGACAAGGCAAAGAAGGAAGC...GGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGGAGCAGTTACGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | GTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGTGTGAGGTATTCCGAGAACTaGCTCAGGCCATCCTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: VPRYLQPPCCHGHVCCSVRYSEN*LRPSSC Trigger: ACATGAGGATGGCCTGAGCAAGTTCTCGGAATACCT...CACACTACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAAGAACTTTGCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTAGTGACCGGAGTTCCTaGTCAAACTGCAGACCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGKNFAVSALLASWFPCSSDRSS*SNCRPP Trigger: GGGCGGTCTGCAGTTTGACAAGGAACTCCGGTCACT...ACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGCAAAGTTCTTCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS GCA 90 bp | ACGTTTTCAGCTAGGCTGCAGGTAAAGGTGATCATTCCAGCCAGTTaGTTTGCGTCTCCCTCAATCAACTGCAGGCTGGGACCCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TFSARLQVKVIIPAS*FASPSINCRLGPIL Trigger: CAGGATGGGTCCCAGCCTGCAGTTGATTGAGGGAGACGCAAAGCAACTGGCTGGAATGATCACCTTTACCTGCAGCCTAGCTGAAAACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 ENSMUST00000174679.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTGTGCTCTCGATGCCTTaGGTGTCAAACTTGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WCSLDLWLTQARQFCIALVLSMP*VSNLPC Trigger: GCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCAC...AAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | TTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACTGCAGACTTCCACATaGTTCAGAGTCACCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLVSMQWCSLDLWLTQARLQTST*FRVTRK Trigger: CTTCCTGGTGACTCTGAACAATGTGGAAGTCTGCAG...TCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | TGGTGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTAGTGTTGATCCAAGGTaGCACCTGCGGCTTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WCSLDLWLTQARQFCIALSVDPR*HLRLDC Trigger: GCAGTCAAGCCGCAGGTGCAACCTTGGATCAACACT...AAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | GTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTAGTGTGCTTTGCTTGATGAACTaGTTTACGACCTTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VPRYLQPPCCHGHVCCSVLCLMN*FTTFST Trigger: GGTGGAGAAGGTCGTAAACAAGTTCATCAAGCAAAG...CACACTACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | ACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCTTTGGCTGACCCTCAATAGGCAGTTATaGAGGAGTTTGTCCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TPCFLVSMQWCSLDLWLTLNRQL*RSLSRH Trigger: GTGCCTGGACAAACTCCTCAATAACTGCCTATTGAG...GGTCAGCCAAAGGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | GCAGTGAGTGCACTCCTTGCTTCCTGGTTTCCATGCAGTGGTGTAGCCTGGACCAGGTCTCGAAATTTGTaGGACACAGCAGCTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVSALLASWFPCSGVAWTRSRNL*DTAAKS Trigger: TGACTTAGCTGCTGTGTCCAACAAATTTCGAGACCT...GGTCCAGGCTACACCACTGCATGGAAACCAGGAAGCAAGGAGTGCACTCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | CGAGAGAGTAACAGATGGCCAGGCATATGCTGCCCACTTAGTCCCCACCTCTCTCTCTTGATATCCTCATaGCGGAAGTCTATGCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RESNRWPGICCPLSPHLSLLISS*RKSMRR Trigger: TCTGCGCATAGACTTCCGCAATGAGGATATCAAGAG...AGAGAGGTGGGGACTAAGTGGGCAGCATATGCCTGGCCATCTGTTACTCTCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS CCA 90 bp | GTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTACCTCCAACCTaGGGCAAATCACCTTCTTTGGTAGCGATAGCAAACTTCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VNIIALPLSPQVPPT*GKSPSLVAIANFSA Trigger: CGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTGCCCCAGGTTGGAGGTACCTGGGGACTTAACGGCAAGGCTATGATGTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174679.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTATCATGCTTCCTTCTTaGCCTTGTCGGCTGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WCSLDLWLTQARQFCIALIMLPS*PCRLSS Trigger: TGAGCTCAGCCGACAAGGCAAAGAAGGAAGCATGAT...AAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | AGCTTGGTGCAGTCACTCAGGAAGGACAGCTTGGCTTCATCAGTGCTCTCGATGCTCAATAGGCAGTTATaGAGGAGTTTGTCCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLVQSLRKDSLASSVLSMLNRQL*RSLSRH Trigger: GTGCCTGGACAAACTCCTCAATAACTGCCTATTGAG...CATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGAGTGACTGCACCAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAAGGCAGCTGTCAAACTaGGCCTGGGCCTGTTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPGSVFICEHHSLAVKSPRQLSN*AWACSP Trigger: AGGGGAACAGGCCCAGGCCAAGTTTGACAGCTGCCT...TGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | TGTCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCGGGGACAGGCTGGCCTaGAACTCTGCCATCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLQVVSLFVNIIALPLSPGDRLA*NSAICC Trigger: ACAGCAGATGGCAGAGTTCAAGGCCAGCCTGTCCCC...GGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS TCA 90 bp | CGTCTCCCTCAATCAACTGCAGGCTGGGACCCATCCTGTGGAGAGTaGCCATCTTACTTTCAATGGTGTTCTGCTGTTCCAAAAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLPQSTAGWDPSCGE*PSYFQWCSAVPKEH Trigger: ATGCTCTTTTGGAACAGCAGAACACCATTGAAAGTAAGATGGTCACTCTCCACAGGATGGGTCCCAGCCTGCAGTTGATTGAGGGAGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000174398.8 ENSMUST00000174679.2 |
||
| CDS-3UTR CAA 90 bp | GTTAAGTCCCCAGGTACCTCCAACCTCCCTGCTGTCATGGGCATGTGTGTTGTACTGGTGGTAGTCCCTTaGCTTGATGAACTTGTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VKSPGTSNLPAVMGMCVVLVVVP*LDELVY Trigger: GTAAACAAGTTCATCAAGCAAAGGGACTACCACCAG...TACAACACACATGCCCATGACAGCAGGGAGGTTGGAGGTACCTGGGGACTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | GGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTACCACCAGGAAGGACAGCTaGGCTTCATCAGTGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GSVFICEHHSLAVKSPGTTRKDS*ASSVLS Trigger: CGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGGT...GGTACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | TGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTTGGATCTGCTGTTCCAGGTaGAGGATGAATTGCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: CSLDLWLTQARQFCIALWICCSR*RMNCCT Trigger: GGTACAGCAATTCATCCTCAACCTGGAACAGCAGAT...CCAAAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS GCA 90 bp | GGACCCATCCTGTGGAGAGTGACCATCTTACTTTCAATGGTGTTCTaGTGTTCCAAAAGAGCATCCAGTTCTTTCTCCACCGCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPILWRVTILLSMVF*CSKRASSSFSTAFS Trigger: GGAGAAAGCGGTGGAGAAAGAACTGGATGCTCTTTTGGAACAGCAGAACACCATTGAAAGTAAGATGGTCACTCTCCACAGGATGGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034203.17 ENSMUST00000174398.8 |
||
| CDS GCA 90 bp | AGGCCCATCCTGTGGAGAGTGACCATCTTACTTTCAATGGTGTTCTaGTGTTCCAAAAGAGCATCCAGTTCTTTCTCCACCGCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPILWRVTILLSMVF*CSKRASSSFSTAFS Trigger: GGAGAAAGCGGTGGAGAAAGAACTGGATGCTCTTTTGGAACAGCAGAACACCATTGAAAGTAAGATGGTCACTCTCCACAGGATGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172668.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCCTGGACCTTTGGCTGACCCAAGCCAGACAGTTTTGCATAGCTCTTTGGAAGAGGTCTCGAAATTaGTTGGACACAGCAGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLDLWLTQARQFCIALWKRSRN*LDTAAK Trigger: CTTAGCTGCTGTGTCCAACAAATTTCGAGACCTCTT...CCAAAGAGCTATGCAAAACTGTCTGGCTTGGGTCAGCCAAAGGTCCAGGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS TCA 90 bp | GGACTTTGCTCGACACGTTTTCAGCTAGGCCCATCCTGTGGAGAGTaGCCATCTTACTTTCAATGGTGTTCTGCTGTTCCAAAAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLCSTRFQLGPSCGE*PSYFQWCSAVPKEH Trigger: ATGCTCTTTTGGAACAGCAGAACACCATTGAAAGTAAGATGGTCACTCTCCACAGGATGGGCCTAGCTGAAAACGTGTCGAGCAAAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172668.8 |
||
| CDS GCA 90 bp | TGCAGTCACTCTCCAGAGTCTTCTTCAGAGTTGAGATGTTTTCACTaGAGACTTCCACATTGTTCAGAGTCACCAGGAAGGACAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSHSPESSSELRCFH*RLPHCSESPGRTAW Trigger: CCAAGCTGTCCTTCCTGGTGACTCTGAACAATGTGGAAGTCTGCAGTGAAAACATCTCAACTCTGAAGAAGACTCTGGAGAGTGACTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 |
||
| CDS GCA 90 bp | GTTCCCATCCTGTGGAGAGTGACCATCTTACTTTCAATGGTGTTCTaGTGTTCCAAAAGAGCATCCAGTTCTTTCTCCACCGCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPILWRVTILLSMVF*CSKRASSSFSTAFS Trigger: GGAGAAAGCGGTGGAGAAAGAACTGGATGCTCTTTTGGAACAGCAGAACACCATTGAAAGTAAGATGGTCACTCTCCACAGGATGGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174723.8 |
||
| CDS-3UTR CAA 90 bp | AACCCTTCCTGCAAGAGGTCTCGAAATTTGTTGGACACAGCAGCTAAGTCAGAACAGTTATTGAGGAGTTaGTCCAGGCACTTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NPSCKRSRNLLDTAAKSEQLLRS*SRHFWC Trigger: GCACCAGAAGTGCCTGGACAAACTCCTCAATAACTG...TTCTGACTTAGCTGCTGTGTCCAACAAATTTCGAGACCTCTTGCAGGAAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTTATAGGCGCAGCCTCTaGATATCCTCATTGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGSVFICEHHSLAVKSPGYRRSL*ISSLRK Trigger: CTTCCGCAATGAGGATATCAAGAGGCTGCGCCTATA...ACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCATTCCAGCCAGTTGCTTaGCGTCTCCCTCAATCAACT | + |
|
Preference number: 5 (lower is better) Translates to: SPGSVFICEHHSLAVKSPFQPVA*RLPQST Trigger: AGTTGATTGAGGGAGACGCAAAGCAACTGGCTGGAA...TGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCACAGTTATTGAGGAGTTaGTCCAGGCACTTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPGSVFICEHHSLAVKSPQLLRS*SRHFWC Trigger: GCACCAGAAGTGCCTGGACAAACTCCTCAATAACTG...TGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | TGTCTCCAGGTAGTGTCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCTGCAGTAATTTCAGGTaGGCATCAATCATGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLQVVSLFVNIIALPLSPCSNFR*ASIMLP Trigger: AGGAAGCATGATTGATGCCAACCTGAAATTACTGCA...GGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGACACTACCTGGAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS-3UTR CAA 90 bp | TCTTTATTTGTGAACATCATAGCCTTGCCGTTAAGTCCCCAGGTACCTCCAACCTGTGTCACATTCTACTaGAAGATATTTGATCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLFVNIIALPLSPQVPPTCVTFY*KIFDQG Trigger: ACCCTGATCAAATATCTTCAAGTAGAATGTGACACA...GGTTGGAGGTACCTGGGGACTTAACGGCAAGGCTATGATGTTCACAAATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034203.17 |
||
| CDS TCA 72 bp | CAGCTTCCAGCTCCTGCAGCTCTGTCAGAGAGCGAATaGGCTCGGTGGAGATTTCGGAGCAGTGTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QLPAPAALSESE*ARWRFRSSVLL Trigger: GAGGAGGACACTGCTCCGAAATCTCCACCGAGCTCATTCGCTCTCTGACAGAGCTGCAGGAGCTGGAAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034203.17 ENSMUST00000172668.8 ENSMUST00000172897.2 ENSMUST00000174165.8 ENSMUST00000174398.8 ENSMUST00000174723.8 |
||
| CDS GCA 72 bp | CCAGGAAGGACAGCTTGGCTTCATCAGTGCTCTCGATaGCTTTGGTGTCAAACTTGCCCTGCTGGAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGRTAWLHQCSR*LWCQTCPAGGC Trigger: GCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 |
||
| CDS GCA 72 bp | AGAGGCGGTTCTTGGCCAGGTCAAGCTGACGGACTTTaGTCGACACGTTTTCAGCTAGGCCCATCCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RGGSWPGQADGL*STRFQLGPSCG Trigger: TCCACAGGATGGGCCTAGCTGAAAACGTGTCGAGCAAAGTCCGTCAGCTTGACCTGGCCAAGAACCGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172668.8 |
||
| CDS CCA 72 bp | GTGCTCTCGATGCCTTTGGTGTCAAACTTGCCCTGCTaGAGGCTGCTGTGCATGATGTTCACGGCACTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLSMPLVSNLPC*RLLCMMFTALV Trigger: GACAAGTGCCGTGAACATCATGCACAGCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS CAA 90 bp | GTCACCAGGAAGGACAGCTTGGCTTCATCAGTGCTCTCGATGCCTTaGGTGTCAAACTTGCCCTGCTGGAGGCTGCTGTGCATGATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VTRKDSLASSVLSMP*VSNLPCWRLLCMMF Trigger: GAACATCATGCACAGCAGCCTCCAGCAGGGCAAGTTTGACACCAAAGGCATCGAGAGCACTGATGAAGCCAAGCTGTCCTTCCTGGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 |
||
| CDS CAA 90 bp | ACGCTGGATGTCCTGAAGTCAGCTTCCAGCTCTCTGGTGGCAAGGTaGATCATGGCACAGAGACAGTCGATGTTAGAGCTGGACAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TLDVLKSASSSLVAR*IMAQRQSMLELDRA Trigger: GGCTCTGTCCAGCTCTAACATCGACTGTCTCTGTGCCATGATCAACCTTGCCACCAGAGAGCTGGAAGCTGACTTCAGGACATCCAGCGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172542.2 |
||
| CDS TCA 72 bp | GTCCAGGCACTTCTGGTGCTCTTGCTTTACTTCTTCTaGAGCCATGGAGTCCCCCACCTCAAAATCCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: VQALLVLLLYFF*SHGVPHLKIRA Trigger: AGCGCGGATTTTGAGGTGGGGGACTCCATGGCTTCAGAAGAAGTAAAGCAAGAGCACCAGAAGTGCCTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000172542.2 ENSMUST00000174398.8 |
||
| CDS GCA 72 bp | GCTGCAGGTAAAGGTGATCATTCCAGCCAGTTGCTTTaGGTCTCCCTCAATCAACTGCAGGCTGGGACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AAGKGDHSSQLL*VSLNQLQAGTH Trigger: ATGGGTCCCAGCCTGCAGTTGATTGAGGGAGACGCAAAGCAACTGGCTGGAATGATCACCTTTACCTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 ENSMUST00000174679.2 |
||
| CDS CAA 72 bp | CCCCAGGTACCTCCAACCTGGGGCAAATCACCTTCTTaGGTAGCGATAGCAAACTTCTCTGCGACTATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQVPPTWGKSPS*VAIANFSATMA Trigger: GGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTGCCCCAGGTTGGAGGTACCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174679.2 |
||
| CDS GCA 72 bp | TACTGGCGACCTGTTTGCACAGGTATTCCGAGAACTTaGTCAGGCCATCCTCATGTAAACCCAGCAGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: YWRPVCTGIPRT*SGHPHVNPAVG Trigger: TCCCACTGCTGGGTTTACATGAGGATGGCCTGAGCAAGTTCTCGGAATACCTGTGCAAACAGGTCGCCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS CCA 72 bp | CGGCACTTGTCACCCCACGCTGGATGTCCTGTAAGGTaGTGGCTGGGAAGCCCATTCTTAGCTTATTACATA | + |
|
Preference number: 6 (lower is better) Translates to: RHLSPHAGCPVR*WLGSPFLAYYI Trigger: TATGTAATAAGCTAAGAATGGGCTTCCCAGCCACCACCTTACAGGACATCCAGCGTGGGGTGACAAGTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS CAA 90 bp | CATAGAACATCCCTGAAGTCAGCTTCCAGCTCTCTGGTGGCAAGGTaGATCATGGCACAGAGACAGTCGATGTTAGAGCTGGACAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HRTSLKSASSSLVAR*IMAQRQSMLELDRA Trigger: GGCTCTGTCCAGCTCTAACATCGACTGTCTCTGTGCCATGATCAACCTTGCCACCAGAGAGCTGGAAGCTGACTTCAGGGATGTTCTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS CAA 90 bp | AACTTGCTCAGGCCATCCTCATGTAAACCCAGCAGTGGGAAGATCTaGAAGAATCGCTCCACCTGGGGCAAATCACCTTCTTTGGTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: NLLRPSSCKPSSGKI*KNRSTWGKSPSLVA Trigger: CGCTACCAAAGAAGGTGATTTGCCCCAGGTGGAGCGATTCTTCAAGATCTTCCCACTGCTGGGTTTACATGAGGATGGCCTGAGCAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS CAA 90 bp | CCGTTAAGTCCCCAGGTACCTCCAACCTGGGGCAAATCACCTTCTTaGGTAGCGATAGCAAACTTCTCTGCGACTATGGCCTTAAGACGT | + |
|
Preference number: 6 (lower is better) Translates to: PLSPQVPPTWGKSPS*VAIANFSATMALRR Trigger: ACGTCTTAAGGCCATAGTCGCAGAGAAGTTTGCTATCGCTACCAAAGAAGGTGATTTGCCCCAGGTTGGAGGTACCTGGGGACTTAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174679.2 |
||
| CDS TCA 72 bp | GGCCATCCTCATGTAAACCCAGCAGTGGGAAGATCTTaGAGAATCGCTCCACCTGGGGCAAATCACCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GHPHVNPAVGRS*RIAPPGANHLL Trigger: AAGAAGGTGATTTGCCCCAGGTGGAGCGATTCTTCAAGATCTTCCCACTGCTGGGTTTACATGAGGATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS GCA 72 bp | ACAACAGATTCTCCTCAGCCTTACTGGCGACCTGTTTaGACAGGTATTCCGAGAACTTGCTCAGGCCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: TTDSPQPYWRPV*TGIPRTCSGHP Trigger: AGGATGGCCTGAGCAAGTTCTCGGAATACCTGTGCAAACAGGTCGCCAGTAAGGCTGAGGAGAATCTGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS CCA 72 bp | ATAGCCTTGCCGTTAAGTCCCCAGGTACCTCCAACCTaGGGCAAATCACCTTCTTTGGTAGCGATAGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IALPLSPQVPPT*GKSPSLVAIAN Trigger: GTTTGCTATCGCTACCAAAGAAGGTGATTTGCCCCAGGTTGGAGGTACCTGGGGACTTAACGGCAAGGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174679.2 |
||
| CDS CAA 72 bp | AGGCCATCCTCATGTAAACCCAGCAGTGGGAAGATCTaGAAGAATCGCTCCACCTGGGGCAAATCACCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RPSSCKPSSGKI*KNRSTWGKSPS Trigger: AGAAGGTGATTTGCCCCAGGTGGAGCGATTCTTCAAGATCTTCCCACTGCTGGGTTTACATGAGGATGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS CAA 72 bp | AACAACAGATTCTCCTCAGCCTTACTGGCGACCTGTTaGCACAGGTATTCCGAGAACTTGCTCAGGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: NNRFSSALLATC*HRYSENLLRPS Trigger: GGATGGCCTGAGCAAGTTCTCGGAATACCTGTGCAAACAGGTCGCCAGTAAGGCTGAGGAGAATCTGTTGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
||
| CDS CAA 72 bp | ACTCTGGACGAGCCGAAACTGCTGGTGGTAGTCCCTTaGCTTGATGAACTTGTTTACGACCTTCTCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: TLDEPKLLVVVP*LDELVYDLLHL Trigger: CAGGTGGAGAAGGTCGTAAACAAGTTCATCAAGCAAAGGGACTACCACCAGCAGTTTCGGCTCGTCCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
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| CDS CCA 72 bp | CACTTGTCACCCCACGCTGGATGTCCTGTAAGGTGGTaGCTGGGAAGCCCATTCTTAGCTTATTACATAGAA | + |
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Preference number: 6 (lower is better) Translates to: HLSPHAGCPVRW*LGSPFLAYYIE Trigger: TTCTATGTAATAAGCTAAGAATGGGCTTCCCAGCCACCACCTTACAGGACATCCAGCGTGGGGTGACAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
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| CDS CCA 72 bp | ACTTTGCTCGACACGTTTTCAGCTAGGCCCATCCTGTaGAGAGTGACCATCTTACTTTCAATGGTGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TLLDTFSARPIL*RVTILLSMVFC Trigger: GCAGAACACCATTGAAAGTAAGATGGTCACTCTCCACAGGATGGGCCTAGCTGAAAACGTGTCGAGCAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172668.8 |
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| CDS CAA 90 bp | CATCAAATTACTCTGGACGAGCCGAAACTGCTGGTGGTAGTCCCTTaGCTTGATGAACTTGTTTACGACCTTCTCCACCTGTGTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: HQITLDEPKLLVVVP*LDELVYDLLHLCVT Trigger: TGTGACACACAGGTGGAGAAGGTCGTAAACAAGTTCATCAAGCAAAGGGACTACCACCAGCAGTTTCGGCTCGTCCAGAGTAATTTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
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| CDS CAA 90 bp | AGAGTCTTCTTCAGAGTTGAGATGTTTTCACTGCAGACTTCCACATaGTTCAGAGTCACCAGGAAGGACAGCTTGGCTTCATCAGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RVFFRVEMFSLQTST*FRVTRKDSLASSVL Trigger: GAGCACTGATGAAGCCAAGCTGTCCTTCCTGGTGACTCTGAACAATGTGGAAGTCTGCAGTGAAAACATCTCAACTCTGAAGAAGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 |
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| CDS GCA 72 bp | CTGTGGAGAGTGACCATCTTACTTTCAATGGTGTTCTaGTGTTCCAAAAGAGCATCCAGTTCTTTCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: LWRVTILLSMVF*CSKRASSSFST Trigger: GGTGGAGAAAGAACTGGATGCTCTTTTGGAACAGCAGAACACCATTGAAAGTAAGATGGTCACTCTCCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034203.17 ENSMUST00000172668.8 ENSMUST00000174398.8 ENSMUST00000174679.2 ENSMUST00000174723.8 |
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| CDS CAA 72 bp | TGCATGGTACAGCTCAATAGGCAGTTATTGAGGAGTTaGTCCAGGCACTTCTGGTGCTCTTGCTTTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: CMVQLNRQLLRS*SRHFWCSCFTS Trigger: AGAAGTAAAGCAAGAGCACCAGAAGTGCCTGGACAAACTCCTCAATAACTGCCTATTGAGCTGTACCATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000172542.2 ENSMUST00000174398.8 |
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| CDS TCA 72 bp | TTTACGACCTTCTCCACCTGTGTGTCACATTCTACTTaGAGATATTTGATCAGGGTAAAGAGTCGCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: FTTFSTCVSHST*RYLIRVKSRPG Trigger: ACCAGGGCGACTCTTTACCCTGATCAAATATCTTCAAGTAGAATGTGACACACAGGTGGAGAAGGTCGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034203.17 ENSMUST00000165867.8 ENSMUST00000174398.8 |
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