Pregenerated sensors for COG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034893Ensembl transcript IDs: ENSMUST00000049168.9
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTGCACATCCATGTTCTACAGGAGCCGTCCCACATGGGGGTCTTaGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCTCTCCTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: GCTSMFYRSRPTWGS*ASCRLQDSSGLSCG Trigger: CCCACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGTGGGACGGCTCCTGTAGAACATGGATGTGCAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CCA 90 bp | CAGGCCGCCTCCTCTCCAGGCTGTGCCACGCTAAAACCTCTTCACTaGTCACTCCCACTCACACACTGGTGCCGGCACTGTGGCGATCCC | + |
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Preference number: 1 (lower is better) Translates to: QAASSPGCATLKPLH*SLPLTHWCRHCGDP Trigger: GGGATCGCCACAGTGCCGGCACCAGTGTGTGAGTGGGAGTGACCAGTGAAGAGGTTTTAGCGTGGCACAGCCTGGAGAGGAGGCGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 90 bp | TCCATGTTCTACAGGAGCCGTCCCACATGGGGGTCTTGGGCATCCTaGAGGCTGCAGGACTCCTCAGGCCTCTCCTGTGGGACAGACTGC | + |
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Preference number: 1 (lower is better) Translates to: SMFYRSRPTWGSWAS*RLQDSSGLSCGTDC Trigger: GCAGTCTGTCCCACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGTGGGACGGCTCCTGTAGAACATGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 90 bp | CCATCCATGAGCCCACTCCCCACAGGCCGCCTCCTCTCCAGGCTGTaGCACGCTAAAACCTCTTCACTGGTCACTCCCACTCACACACTG | + |
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Preference number: 1 (lower is better) Translates to: PSMSPLPTGRLLSRL*HAKTSSLVTPTHTL Trigger: CAGTGTGTGAGTGGGAGTGACCAGTGAAGAGGTTTTAGCGTGGCACAGCCTGGAGAGGAGGCGGCCTGTGGGGAGTGGGCTCATGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 90 bp | CGTGCAACTGTGCAAGAGGCTGTTCCTGTCCCTTCACCTGCACCATaGGGTCATCTGCCCTATTTCAGAGCCCTCAGCACTGTCCCACCC | + |
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Preference number: 1 (lower is better) Translates to: RATVQEAVPVPSPAP*GHLPYFRALSTVPP Trigger: GGGTGGGACAGTGCTGAGGGCTCTGAAATAGGGCAGATGACCTCATGGTGCAGGTGAAGGGACAGGAACAGCCTCTTGCACAGTTGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 90 bp | GCAACGGCCACCACCAATTTAAACTGGGCTGAGAAACTGGCCTGTTaGATCGGGATGGGTCACCCACGTGCAACTGTGCAAGAGGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: ATATTNLNWAEKLAC*IGMGHPRATVQEAV Trigger: AACAGCCTCTTGCACAGTTGCACGTGGGTGACCCATCCCGATGCAACAGGCCAGTTTCTCAGCCCAGTTTAAATTGGTGGTGGCCGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 90 bp | CATCCGATTCCAACTCAACCTCGCTCGACCCAGCATGAGAAGCTCTaGATCGGGACACAGAAGGAAGAGTTCTTCAAGTCACAGCGTCCG | + |
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Preference number: 1 (lower is better) Translates to: HPIPTQPRSTQHEKL*IGTQKEEFFKSQRP Trigger: CGGACGCTGTGACTTGAAGAACTCTTCCTTCTGTGTCCCGATGCAGAGCTTCTCATGCTGGGTCGAGCGAGGTTGAGTTGGAATCGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 90 bp | TGGCAGCAACCATCCGATTCCAACTCAACCTCGCTCGACCCAGCATaGGAAGCTCTGCATCGGGACACAGAAGGAAGAGTTCTTCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: WQQPSDSNSTSLDPA*EALHRDTEGRVLQV Trigger: GACTTGAAGAACTCTTCCTTCTGTGTCCCGATGCAGAGCTTCTCATGCTGGGTCGAGCGAGGTTGAGTTGGAATCGGATGGTTGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 90 bp | ACTACAAGAGTCCTCGAACAAGTCCTGCTCTGTCCATCAGACTGCTaGGCCACAGCACTGTACAACGGTCACGTCCTCGCTTCTTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: TTRVLEQVLLCPSDC*ATALYNGHVLASLE Trigger: TTCCAAAGAAGCGAGGACGTGACCGTTGTACAGTGCTGTGGCTCAGCAGTCTGATGGACAGAGCAGGACTTGTTCGAGGACTCTTGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CCA 90 bp | CAGAGTAATATGCTCTACCAAGCAACGGCCACCACCAATTTAAACTaGGCTGAGAAACTGGCCTGTTGCATCGGGATGGGTCACCCACGT | + |
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Preference number: 1 (lower is better) Translates to: QSNMLYQATATTNLN*AEKLACCIGMGHPR Trigger: ACGTGGGTGACCCATCCCGATGCAACAGGCCAGTTTCTCAGCCCAGTTTAAATTGGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CCA 90 bp | GAGGCAGCTATCCCTGCTGTCAGTCTTTGGCATTTTGATCTTCTCTaGCTCACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: EAAIPAVSLWHFDLL*LTQVSFCRLHIHVL Trigger: TAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTGAGCCAGAGAAGATCAAAATGCCAAAGACTGACAGCAGGGATAGCTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 90 bp | AGCACTGTACAACGGTCACGTCCTCGCTTCTTTGGAAAGGCTATCTaGACACCCAATGTACATATAATACACAGAACTGGAGATTATGGT | + |
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Preference number: 1 (lower is better) Translates to: STVQRSRPRFFGKAI*TPNVHIIHRTGDYG Trigger: ACCATAATCTCCAGTTCTGTGTATTATATGTACATTGGGTGTTCAGATAGCCTTTCCAAAGAAGCGAGGACGTGACCGTTGTACAGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CAA 90 bp | AGGCTGCACATCCATGTTCTACAGGAGCCGTCCCACATGGGGGTCTaGGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCTCTCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RLHIHVLQEPSHMGV*GILQAAGLLRPLLW Trigger: CCACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGTGGGACGGCTCCTGTAGAACATGGATGTGCAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCTCTCCAGGCTGTGCCACGCTAAAACCTCTTCACTGGTCACTCCCACTCGAGGCCTTGGCTTCTTaGAACTGCCCCTGCCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: ASSPGCATLKPLHWSLPLEALAS*NCPCLV Trigger: CACAAGGCAGGGGCAGTTGCAAGAAGCCAAGGCCTC...GAGTGGGAGTGACCAGTGAAGAGGTTTTAGCGTGGCACAGCCTGGAGAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCGACCCAGCATGAGAAGCTCTGCATCGGGACACAGAAGGAAGAGTTCTTCACTCAGGCCTCTCCTGTaGGACAGACTGCTGACACTC | + |
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Preference number: 2 (lower is better) Translates to: ARPSMRSSASGHRRKSSSLRPLL*DRLLTL Trigger: GAGTGTCAGCAGTCTGTCCCACAGGAGAGGCCTGAG...TGAAGAACTCTTCCTTCTGTGTCCCGATGCAGAGCTTCTCATGCTGGGTCGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR CCA 90 bp | AATATGCTCTACCAAGCAACGGCCACCACCAATTTAAACTGGGCTGAGAAACTGCCCACATGGGGGTCTTaGGCATCCTGCAGGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: NMLYQATATTNLNWAEKLPTWGS*ASCRLQ Trigger: CTGCAGCCTGCAGGATGCCCAAGACCCCCATGTGGG...CAGTTTCTCAGCCCAGTTTAAATTGGTGGTGGCCGTTGCTTGGTAGAGCATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCAGGAGCCGTCCCACATaGGGGTCTTGGGCATCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SEFPKIQSNMLYQATATTRSRPT*GSWASC Trigger: GCAGGATGCCCAAGACCCCCATGTGGGACGGCTCCT...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAATATTCATTCAGCAAACGAACTGGATCAGTCCCACCCTCCCAGCAGTTGGGGTCTTGGGCATCCTaGAGGCTGCAGGACTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: NKYSFSKRTGSVPPSQQLGSWAS*RLQDSS Trigger: TGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCC...CAACTGCTGGGAGGGTGGGACTGATCCAGTTCGTTTGCTGAATGAATATTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR GCA 90 bp | CACTGTACAACGGTCACGTCCTCGCTTCTTTGGAAAGGCTATCTGAACACCCAAACCCACGTGCAACTGTaGAAGAGGCTGTTCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: HCTTVTSSLLWKGYLNTQTHVQL*KRLFLS Trigger: GGACAGGAACAGCCTCTTGCACAGTTGCACGTGGGT...TTGGGTGTTCAGATAGCCTTTCCAAAGAAGCGAGGACGTGACCGTTGTACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR TCA 90 bp | TCGACCCAGCATGAGAAGCTCTGCATCGGGACACAGAAGGAAGAGTTCTTCAAGCAGTCTTTGGCATTTTaGTCTTCTCTGGCTCACCCA | + |
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Preference number: 2 (lower is better) Translates to: STQHEKLCIGTQKEEFFKQSLAF*SSLAHP Trigger: TGGGTGAGCCAGAGAAGATCAAAATGCCAAAGACTG...CTTGAAGAACTCTTCCTTCTGTGTCCCGATGCAGAGCTTCTCATGCTGGGTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR TCA 90 bp | CCCATCATCAAGATACACCTCTCTAGTGAGGAGGATGCAGTTCAAGGAGCCTTACAGCCCACAGAAAGATaGCAGCCTGAGTCCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PIIKIHLSSEEDAVQGALQPTER*QPESRK Trigger: TTTCCTGGACTCAGGCTGTCATCTTTCTGTGGGCTG...TAAGGCTCCTTGAACTGCATCCTCCTCACTAGAGAGGTGTATCTTGATGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAATATTCATTCAGCAAACGAACTGGATCAGTCCCACCCTCCCAGCAGTTGTTGGCTTCTTGCAACTaGCCCTGCCTTGTGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: NKYSFSKRTGSVPPSQQLLASCN*PCLVSA Trigger: GGCTGACACAAGGCAGGGGCAGTTGCAAGAAGCCAA...CAACTGCTGGGAGGGTGGGACTGATCCAGTTCGTTTGCTGAATGAATATTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CAA 90 bp | CCTACTTTATTGCACAAGCTGTGTGAAGGAACATTTCACTGTGAATaGTGGCCCCCTGTCGCTTCTCTCCACTGCTGGAGACCAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: PTLLHKLCEGTFHCE*WPPVASLHCWRPVQ Trigger: TTGAACTGGTCTCCAGCAGTGGAGAGAAGCGACAGGGGGCCACAATTCACAGTGAAATGTTCCTTCACACAGCTTGTGCAATAAAGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR GCA 90 bp | AATCAAAGCACTACAAGAGTCCTCGAACAAGTCCTGCTCTGTCCATCAGACTGCACCCAGGTTTCCTTCTaGAGGCTGCACATCCATGTT | + |
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Preference number: 2 (lower is better) Translates to: NQSTTRVLEQVLLCPSDCTQVSF*RLHIHV Trigger: AACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGT...GCAGTCTGATGGACAGAGCAGGACTTGTTCGAGGACTCTTGTAGTGCTTTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR CCA 90 bp | CCCATCATCAAGATACACCTCTCTAGTGAGGAGGATGCAGTTCAAGGAGCCTTATTTCACTGTGAATTGTaGCCCCCTGTCGCTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PIIKIHLSSEEDAVQGALFHCEL*PPVASL Trigger: GAGAGAAGCGACAGGGGGCCACAATTCACAGTGAAA...TAAGGCTCCTTGAACTGCATCCTCCTCACTAGAGAGGTGTATCTTGATGATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCCATTTTGATCTTCTCTaGCTCACCCAGGTTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SEFPKIQSNMLYQATATTHFDLL*LTQVSF Trigger: GAAGGAAACCTGGGTGAGCCAGAGAAGATCAAAATG...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGTTGGTAAGGTATGTGAGTGTTTTCAGAAACAAACAAATCAAAGCACTACCTTATAGGAGGCCTTaGCTTCTTGCAACTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: QQLVRYVSVFRNKQIKALPYRRP*LLATAP Trigger: AGGGGCAGTTGCAAGAAGCCAAGGCCTCCTATAAGG...TAGTGCTTTGATTTGTTTGTTTCTGAAAACACTCACATACCTTACCAACTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CAA 90 bp | TATTCATTCAGCAAACGAACTGGATCAGTCCCACCCTCCCAGCAGTaGGTAAGGTATGTGAGTGTTTTCAGAAACAAACAAATCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: YSFSKRTGSVPPSQQ*VRYVSVFRNKQIKA Trigger: TGCTTTGATTTGTTTGTTTCTGAAAACACTCACATACCTTACCAACTGCTGGGAGGGTGGGACTGATCCAGTTCGTTTGCTGAATGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGTTGGTAAGGTATGTGAGTGTTTTCAGAAACAAACAAATCAAAGCACTATTTCCTTCTGCAGGCTaGACATCCATGTTCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: QQLVRYVSVFRNKQIKALFPSAG*TSMFYR Trigger: CCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAA...TAGTGCTTTGATTTGTTTGTTTCTGAAAACACTCACATACCTTACCAACTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 72 bp | TACAGGAGCCGTCCCACATGGGGGTCTTGGGCATCCTaGAGGCTGCAGGACTCCTCAGGCCTCTCCTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: YRSRPTWGSWAS*RLQDSSGLSCG Trigger: CCCACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGTGGGACGGCTCCTGTA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 72 bp | AGCCCACTCCCCACAGGCCGCCTCCTCTCCAGGCTGTaGCACGCTAAAACCTCTTCACTGGTCACTCCCACT | + |
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Preference number: 3 (lower is better) Translates to: SPLPTGRLLSRL*HAKTSSLVTPT Trigger: AGTGGGAGTGACCAGTGAAGAGGTTTTAGCGTGGCACAGCCTGGAGAGGAGGCGGCCTGTGGGGAGTGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CCA 72 bp | TCCATGTTCTACAGGAGCCGTCCCACATGGGGGTCTTaGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SMFYRSRPTWGS*ASCRLQDSSGL Trigger: GAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGTGGGACGGCTCCTGTAGAACATGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 72 bp | CCTGTTGCATCGGGATGGGTCACCCACGTGCAACTGTaGAAGAGGCTGTTCCTGTCCCTTCACCTGCACCAT | + |
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Preference number: 3 (lower is better) Translates to: PVASGWVTHVQL*KRLFLSLHLHH Trigger: ATGGTGCAGGTGAAGGGACAGGAACAGCCTCTTGCACAGTTGCACGTGGGTGACCCATCCCGATGCAACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 72 bp | GTCCTCGAACAAGTCCTGCTCTGTCCATCAGACTGCTaGGCCACAGCACTGTACAACGGTCACGTCCTCGCT | + |
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Preference number: 3 (lower is better) Translates to: VLEQVLLCPSDC*ATALYNGHVLA Trigger: AGCGAGGACGTGACCGTTGTACAGTGCTGTGGCTCAGCAGTCTGATGGACAGAGCAGGACTTGTTCGAGGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CCA 72 bp | AGGAGGATGCAGTTCAAGGAGCCTTATAGGAGGCCTTaGCTTCTTGCAACTGCCCCTGCCTTGTGTCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: RRMQFKEPYRRP*LLATAPALCQP Trigger: GGGCTGACACAAGGCAGGGGCAGTTGCAAGAAGCCAAGGCCTCCTATAAGGCTCCTTGAACTGCATCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 72 bp | GTGCAAGAGGCTGTTCCTGTCCCTTCACCTGCACCATaGGGTCATCTGCCCTATTTCAGAGCCCTCAGCACT | + |
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Preference number: 3 (lower is better) Translates to: VQEAVPVPSPAP*GHLPYFRALST Trigger: AGTGCTGAGGGCTCTGAAATAGGGCAGATGACCTCATGGTGCAGGTGAAGGGACAGGAACAGCCTCTTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 72 bp | CTACCAAGCAACGGCCACCACCAATTTAAACTGGGCTaGGAAACTGGCCTGTTGCATCGGGATGGGTCACCC | + |
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Preference number: 3 (lower is better) Translates to: LPSNGHHQFKLG*ETGLLHRDGSP Trigger: GGGTGACCCATCCCGATGCAACAGGCCAGTTTCTCAGCCCAGTTTAAATTGGTGGTGGCCGTTGCTTGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 72 bp | ATCTTCTCTGGCTCACCCAGGTTTCCTTCTGCAGGCTaGACATCCATGTTCTACAGGAGCCGTCCCACATGG | + |
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Preference number: 3 (lower is better) Translates to: IFSGSPRFPSAG*TSMFYRSRPTW Trigger: CCATGTGGGACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTGAGCCAGAGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 72 bp | CCATCCGATTCCAACTCAACCTCGCTCGACCCAGCATaGGAAGCTCTGCATCGGGACACAGAAGGAAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: PSDSNSTSLDPA*EALHRDTEGRV Trigger: AACTCTTCCTTCTGTGTCCCGATGCAGAGCTTCTCATGCTGGGTCGAGCGAGGTTGAGTTGGAATCGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 72 bp | CCCTGCCTTGTGTCAGCCCACAGAAAGATGACAGCCTaGGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PCLVSAHRKMTA*VQEKLDAFLAA Trigger: TGCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGGGCTGACACAAGGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 72 bp | AAACCTCTTCACTGGTCACTCCCACTCACACACTGGTaGCGGCACTGTGGCGATCCCCATCATCAAGATACA | + |
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Preference number: 3 (lower is better) Translates to: KPLHWSLPLTHW*RHCGDPHHQDT Trigger: TGTATCTTGATGATGGGGATCGCCACAGTGCCGGCACCAGTGTGTGAGTGGGAGTGACCAGTGAAGAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 72 bp | TGCAACTGTGCAAGAGGCTGTTCCTGTCCCTTCACCTaGACCATGAGGTCATCTGCCCTATTTCAGAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: CNCARGCSCPFT*TMRSSALFQSP Trigger: AGGGCTCTGAAATAGGGCAGATGACCTCATGGTGCAGGTGAAGGGACAGGAACAGCCTCTTGCACAGTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCTCCCACATGGGGGTCTaGGGCATCCTGCAGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SEFPKIQSNMLYQATATTSHMGV*GILQAA Trigger: TGCAGCCTGCAGGATGCCCAAGACCCCCATGTGGGA...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 72 bp | CCTGTCGCTTCTCTCCACTGCTGGAGACCAGTTCAATaGGGCAGCTATCCCTGCTGTCAGTCTTTGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: PVASLHCWRPVQ*GSYPCCQSLAF Trigger: AAATGCCAAAGACTGACAGCAGGGATAGCTGCCTCATTGAACTGGTCTCCAGCAGTGGAGAGAAGCGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CCA 72 bp | CACAAGCTGTGTGAAGGAACATTTCACTGTGAATTGTaGCCCCCTGTCGCTTCTCTCCACTGCTGGAGACCA | + |
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Preference number: 3 (lower is better) Translates to: HKLCEGTFHCEL*PPVASLHCWRP Trigger: TGGTCTCCAGCAGTGGAGAGAAGCGACAGGGGGCCACAATTCACAGTGAAATGTTCCTTCACACAGCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CCA 72 bp | ATGCTCTACCAAGCAACGGCCACCACCAATTTAAACTaGGCTGAGAAACTGGCCTGTTGCATCGGGATGGGT | + |
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Preference number: 3 (lower is better) Translates to: MLYQATATTNLN*AEKLACCIGMG Trigger: ACCCATCCCGATGCAACAGGCCAGTTTCTCAGCCCAGTTTAAATTGGTGGTGGCCGTTGCTTGGTAGAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR GCA 72 bp | CAAATCAAAGCACTACAAGAGTCCTCGAACAAGTCCTaGTCTGTCCATCAGACTGCTGAGCCACAGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: QIKALQESSNKS*SVHQTAEPQHC Trigger: ACAGTGCTGTGGCTCAGCAGTCTGATGGACAGAGCAGGACTTGTTCGAGGACTCTTGTAGTGCTTTGATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CCA 72 bp | CCACAGCACTGTACAACGGTCACGTCCTCGCTTCTTTaGAAAGGCTATCTGAACACCCAATGTACATATAAT | + |
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Preference number: 3 (lower is better) Translates to: PQHCTTVTSSLL*KGYLNTQCTYN Trigger: ATTATATGTACATTGGGTGTTCAGATAGCCTTTCCAAAGAAGCGAGGACGTGACCGTTGTACAGTGCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR TCA 72 bp | CAACGGTCACGTCCTCGCTTCTTTGGAAAGGCTATCTaGACACCCAATGTACATATAATACACAGAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QRSRPRFFGKAI*TPNVHIIHRTG Trigger: TCCAGTTCTGTGTATTATATGTACATTGGGTGTTCAGATAGCCTTTCCAAAGAAGCGAGGACGTGACCGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGTTGGTAAGGTATGTGAGTGTTTTCAGAAACAAACAAATCAAAGCACTATCAGTCTTTGGCATTTaGATCTTCTCTGGCTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: QQLVRYVSVFRNKQIKALSVFGI*IFSGSP Trigger: GGGTGAGCCAGAGAAGATCAAAATGCCAAAGACTGA...TAGTGCTTTGATTTGTTTGTTTCTGAAAACACTCACATACCTTACCAACTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGAAACAAACAAATCAAAGCACTACAAGAGTCCTCGAACAAGTCCTGCTCGATGCTTATAGTCCTTaGACTTTTGACTGGTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FQKQTNQSTTRVLEQVLLDAYSP*TFDWCH Trigger: ATGACACCAGTCAAAAGTCAAAGGACTATAAGCATC...GAGCAGGACTTGTTCGAGGACTCTTGTAGTGCTTTGATTTGTTTGTTTCTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| 3UTR GCA 72 bp | GTGCATCACACTAGTCACTACTGTAACCTACTTTATTaGACAAGCTGTGTGAAGGAACATTTCACTGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VHHTSHYCNLLY*TSCVKEHFTVN Trigger: ATTCACAGTGAAATGTTCCTTCACACAGCTTGTGCAATAAAGTAGGTTACAGTAGTGACTAGTGTGATGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| 3UTR CAA 72 bp | ATCCATGTTCTACAGGAGCCGTCCCACATGGGGGTCTaGGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IHVLQEPSHMGV*GILQAAGLLRP Trigger: AGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGTGGGACGGCTCCTGTAGAACATGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTCTCCAGGCTGTGCCACGCTAAAACCTCTTCACTGGTCACTCCCACTCTGGGGCCTCCCTGGCTaGCCATGGTTTTCAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSPGCATLKPLHWSLPLWGLPG*PWFSML Trigger: CAGCATTGAAAACCATGGCCAGCCAGGGAGGCCCCA...GAGTGGGAGTGACCAGTGAAGAGGTTTTAGCGTGGCACAGCCTGGAGAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | ACATGGGGGTCTTGGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCTCTCCTGTTACTTGGGGCCTCCCTaGCTGGCCATGGTTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TWGSWASCRLQDSSGLSCYLGPP*LAMVFN Trigger: ATTGAAAACCATGGCCAGCCAGGGAGGCCCCAAGTA...ACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTCTCCAGGCTGTGCCACGCTAAAACCTCTTCACTGGTCACTCCCACTCAGCCTGGTCTGCTGCTaGATGAACTGCTCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSPGCATLKPLHWSLPLSLVCC*MNCSQA Trigger: AGCCTGTGAGCAGTTCATTCAGCAGCAGACCAGGCT...GAGTGGGAGTGACCAGTGAAGAGGTTTTAGCGTGGCACAGCCTGGAGAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | ACATGGGGGTCTTGGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCTCTCCTGTTCAATGGGCAGCGACTaGGATGCTAAGCTGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: TWGSWASCRLQDSSGLSCSMGSD*DAKLHT Trigger: TGTATGCAGCTTAGCATCCCAGTCGCTGCCCATTGA...ACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | ACATGGGGGTCTTGGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCTCTCCTGTCAAGATAATGTTCTCTaGTCTCAGGAGTCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TWGSWASCRLQDSSGLSCQDNVL*SQESPP Trigger: TGGAGGGGACTCCTGAGATCAGAGAACATTATCTTG...ACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | GGAACATTTCACTGTGAATTGTGGCCCCCTGTCGCTTCTCTCCACTGCTGGAGAGGCTGTGCCCACGGCTaGTGTGAGAGGGTGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTFHCELWPPVASLHCWRGCAHG*CERVYL Trigger: CAAGTACACCCTCTCACAGCAGCCGTGGGCACAGCC...TCTCCAGCAGTGGAGAGAAGCGACAGGGGGCCACAATTCACAGTGAAATGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | CTATCCCTGCTGTCAGTCTTTGGCATTTTGATCTTCTCTGGCTCACCCAGGTTTAGCACCGAGTCCGTCTaGCTGTCTGTCAGCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVFGILIFSGSPRFSTESV*LSVSGA Trigger: GGCGCCGCTGACAGACAGGCAGACGGACTCGGTGCT...AAACCTGGGTGAGCCAGAGAAGATCAAAATGCCAAAGACTGACAGCAGGGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCCTCTCCAGGCTGTGCCACGCTAAAACCTCTTCACTGGTCACTCCCACTCCTGCTTTACTCCAGCTaGAAATGCCCCCAGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPGCATLKPLHWSLPLLLYSS*KCPQLF Trigger: GAACAACTGGGGGCATTTGCAGCTGGAGTAAAGCAG...GAGTGGGAGTGACCAGTGAAGAGGTTTTAGCGTGGCACAGCCTGGAGAGGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTAGTGTAGGCAATACTTaGGCCCAAAAGGAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSPRFPSAGCTSMFYRSRSVGNT*AQKELP Trigger: CGGGAGCTCCTTTTGGGCCCAAGTATTGCCTACACT...ACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | ACATGGGGGTCTTGGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCTCTCCTGTTGTTCACAGGCTTCATaGAGAGTTCCTGTCTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: TWGSWASCRLQDSSGLSCCSQAS*RVPVLL Trigger: CAATAAGACAGGAACTCTTCATGAAGCCTGTGAACA...ACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCTGCCCACGGCTGCTGTaGGAGGGTGTACTTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEFPKIQSNMLYQATATTCPRLL*EGVLGA Trigger: GGCCCCAAGTACACCCTCTCACAGCAGCCGTGGGCA...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTCCCAGTGTCCTTCGAACTGTaGGATACCACATCCCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HPGFLLQAAHPCSTGAVPVSFEL*DTTSRE Trigger: TTCACGGGATGTGGTATCCCACAGTTCGAAGGACAC...TGGGACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | CACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTCCCAGGCTGGTTAACTCTGTaGCAGTGTAGGCAATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPGFLLQAAHPCSTGAVPGWLTL*QCRQYL Trigger: CAAGTATTGCCTACACTGTCACAGAGTTAACCAGCC...TGGGACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | GGCTCACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTCTGGTTTGTAGCCTGTaGTGTCCGTCTGAATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSPRFPSAGCTSMFYRSRLVCSL*CPSECR Trigger: TCTACATTCAGACGGACATCACAGGCTACAAACCAG...ACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTCTCCAGGCTGTGCCACGCTAAAACCTCTTCACTGGTCACTCCCACTCAGTTGGTGCTCATCTTaGCAGACATGGACCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASSPGCATLKPLHWSLPLSWCSS*QTWTIK Trigger: CTTTATGGTCCATGTCTGCCAAGATGAGCACCAACT...GAGTGGGAGTGACCAGTGAAGAGGTTTTAGCGTGGCACAGCCTGGAGAGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | CACTGTACAACGGTCACGTCCTCGCTTCTTTGGAAAGGCTATCTGAACACCCAAGTCATTGACCTTTGCTaGCTGTGCCCACGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HCTTVTSSLLWKGYLNTQVIDLC*LCPRLL Trigger: CAGCAGCCGTGGGCACAGCCAGCAAAGGTCAATGAC...TTGGGTGTTCAGATAGCCTTTCCAAAGAAGCGAGGACGTGACCGTTGTACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCTTCTGCAACGACTCCTaGTGCTGCAGAGCACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQKDDSLSPGKARCLLGSFCNDS*CCRALF Trigger: GAACAGTGCTCTGCAGCATCAGGAGTCGTTGCAGAA...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | GGCTCACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTGAAGGCGCCTTCTTCTaGTCATCCTTTAAACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPRFPSAGCTSMFYRSREGAFF*SSFKLC Trigger: ACAGAGTTTAAAGGATGAGCAGAAGAAGGCGCCTTC...ACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | CACTGTACAACGGTCACGTCCTCGCTTCTTTGGAAAGGCTATCTGAACACCCAACCCGTGAAGATCTGCTaGAGAGATCGTCGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCTTVTSSLLWKGYLNTQPVKIC*RDRRLW Trigger: CCACAGACGACGATCTCTCCAGCAGATCTTCACGGG...TTGGGTGTTCAGATAGCCTTTCCAAAGAAGCGAGGACGTGACCGTTGTACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCCTATTTCAGAGCCCTCAGCACTGTCCCACCCTACAGACGACGGTCTGAGTCCCTTTTTAGTAACTaGTTTGTGAGAGTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPYFRALSTVPPYRRRSESLFSN*FVRVCS Trigger: ACTGCAGACTCTCACAAATCAGTTACTAAAAAGGGA...CTCAGACCGTCGTCTGTAGGGTGGGACAGTGCTGAGGGCTCTGAAATAGGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCGAACTGCTCACAGGCTaGCTTCAGGTGCCGGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SEFPKIQSNMLYQATATTELLTG*LQVPVY Trigger: GTAGACCGGCACCTGAAGTCAGCCTGTGAGCAGTTC...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCATGAACTCCTCCAGCTaGTCTACAAACAGCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQKDDSLSPGKARCLLGSMNSSS*STNSLV Trigger: GACCAGGCTGTTTGTAGAGCAGCTGGAGGAGTTCAT...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCGCATACATCTTCAATTaGGAGCTCGGCGGGCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SEFPKIQSNMLYQATATTAYIFN*ELGGHR Trigger: CCGGTGCCCGCCGAGCTCCCAATTGAAGATGTATGC...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCAGAGATCGTCGTCTGTaGTCTAGGATTGAGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQKDDSLSPGKARCLLGSRDRRL*SRIEGV Trigger: GACTCCCTCAATCCTAGACCACAGACGACGATCTCT...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| 3UTR CAA 72 bp | TTGCACAAGCTGTGTGAAGGAACATTTCACTGTGAATaGTGGCCCCCTGTCGCTTCTCTCCACTGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHKLCEGTFHCE*WPPVASLHCWR Trigger: TCTCCAGCAGTGGAGAGAAGCGACAGGGGGCCACAATTCACAGTGAAATGTTCCTTCACACAGCTTGTGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | CACTGTACAACGGTCACGTCCTCGCTTCTTTGGAAAGGCTATCTGAACACCCAACTCCCTGGCTGGCCATaGTTTTCAATGCTGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: HCTTVTSSLLWKGYLNTQLPGWP*FSMLIP Trigger: AGGTATCAGCATTGAAAACCATGGCCAGCCAGGGAG...TTGGGTGTTCAGATAGCCTTTCCAAAGAAGCGAGGACGTGACCGTTGTACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| 3UTR CAA 72 bp | ATGAGGCAGCTATCCCTGCTGTCAGTCTTTGGCATTTaGATCTTCTCTGGCTCACCCAGGTTTCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRQLSLLSVFGI*IFSGSPRFPSA Trigger: TGCAGAAGGAAACCTGGGTGAGCCAGAGAAGATCAAAATGCCAAAGACTGACAGCAGGGATAGCTGCCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCCAGTTTTGCAAACCATaGGAAAAACTGCTGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQKDDSLSPGKARCLLGSQFCKP*EKLLRS Trigger: ACTGCGCAGCAGTTTTTCTCATGGTTTGCAAAACTG...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | GGCTCACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTAGTTGTCCATCAATCTaGGTCTTGTTTTTGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GSPRFPSAGCTSMFYRSRSCPSI*VLFLLI Trigger: TATCAGCAAAAACAAGACTCAGATTGATGGACAACT...ACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCTTCTGGAAGACTTGCTaGATGTTATTCCTGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQKDDSLSPGKARCLLGSFWKTC*MLFLTG Trigger: GCCTGTCAGGAATAACATTCAGCAAGTCTTCCAGAA...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCGGATGTCTTCAGAACTaGACTCTTCCTTTAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQKDDSLSPGKARCLLGSGCLQN*TLPLAE Trigger: CTCTGCTAAAGGAAGAGTTCAGTTCTGAAGACATCC...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | CCCATCATCAAGATACACCTCTCTAGTGAGGAGGATGCAGTTCAAGGAGCCTTATACTCCAGCTGCAAATaGCCCCAGTTGTTCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIIKIHLSSEEDAVQGALYSSCK*PQLFSV Trigger: AACGCTGAACAACTGGGGGCATTTGCAGCTGGAGTA...TAAGGCTCCTTGAACTGCATCCTCCTCACTAGAGAGGTGTATCTTGATGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | CACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTCCCAACACCGCCCTATCTATaGATCTATATAATTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPGFLLQAAHPCSTGAVPTPPYL*IYIIWR Trigger: TCTCCAAATTATATAGATGCATAGATAGGGCGGTGT...TGGGACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | TCGACCCAGCATGAGAAGCTCTGCATCGGGACACAGAAGGAAGAGTTCTTCAAGACAAATACAAAGCCATaGTTCTCAGTGTCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STQHEKLCIGTQKEEFFKTNTKP*FSVSAA Trigger: TGCCGCTGACACTGAGAAGCATGGCTTTGTATTTGT...CTTGAAGAACTCTTCCTTCTGTGTCCCGATGCAGAGCTTCTCATGCTGGGTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTTGCATCTATATAATTTaGAGAGACAGACAAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSPRFPSAGCTSMFYRSRCIYII*RDRQVS Trigger: GGACACTTGTCTGTCTCTCCAAATTATATAGATGCA...ACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCCGATTTGCTCCATCATaGCTAGCTTATCAGGATATG | + |
|
Preference number: 4 (lower is better) Translates to: PQKDDSLSPGKARCLLGSRFAPS*LAYQDM Trigger: CATATCCTGATAAGCTAGTCATGATGGAGCAAATCG...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCTGGAAGGACAAGCAATaGTTTGGATGTCTTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQKDDSLSPGKARCLLGSWKDKQ*FGCLQN Trigger: GTTCTGAAGACATCCAAATCATTGCTTGTCCTTCCA...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | GGAACATTTCACTGTGAATTGTGGCCCCCTGTCGCTTCTCTCCACTGCTGGAGAATGTCATTGAGAAGGTaGTGGTATTCGGGTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTFHCELWPPVASLHCWRMSLRR*WYSGIF Trigger: AAAGATACCCGAATACCAGCACCTTCTCAATGACAT...TCTCCAGCAGTGGAGAGAAGCGACAGGGGGCCACAATTCACAGTGAAATGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR GCA 90 bp | CACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTCCCACAGGATTTTAAATGCTaGATCTCTAGTTTTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPGFLLQAAHPCSTGAVPQDFKC*ISSFLE Trigger: CTCAAGAAAACTAGAGATGCAGCATTTAAAATCCTG...TGGGACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTGAGTTCCTGTCTTATTaGACACAAAAAGATACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSPRFPSAGCTSMFYRSREFLSY*TQKDTV Trigger: AACAGTATCTTTTTGTGTCCAATAAGACAGGAACTC...ACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR TCA 90 bp | AACAAATATTCATTCAGCAAACGAACTGGATCAGTCCCACCCTCCCAGCAGTTGCTGATACCTTTGTCATaGACTCCTCCAGCTGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NKYSFSKRTGSVPPSQQLLIPLS*TPPAAL Trigger: TAGAGCAGCTGGAGGAGTTCATGACAAAGGTATCAG...CAACTGCTGGGAGGGTGGGACTGATCCAGTTCGTTTGCTGAATGAATATTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCTCATCTTGGCAGACATaGACCATAAAGGCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEFPKIQSNMLYQATATTSSWQT*TIKAQP Trigger: TGGCTGTGCCTTTATGGTCCATGTCTGCCAAGATGA...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CCA 90 bp | CCCATCATCAAGATACACCTCTCTAGTGAGGAGGATGCAGTTCAAGGAGCCTTATCCTGTGATAATCCTTaGAACACCGCCCTATCTATG | + |
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Preference number: 4 (lower is better) Translates to: PIIKIHLSSEEDAVQGALSCDNP*NTALSM Trigger: CATAGATAGGGCGGTGTTCCAAGGATTATCACAGGA...TAAGGCTCCTTGAACTGCATCCTCCTCACTAGAGAGGTGTATCTTGATGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CCA 90 bp | AACAAATATTCATTCAGCAAACGAACTGGATCAGTCCCACCCTCCCAGCAGTTGTCCTTTAGCAGAGCGTaGAACTTCTGGAAGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKYSFSKRTGSVPPSQQLSFSRA*NFWKTC Trigger: GCAAGTCTTCCAGAAGTTCCACGCTCTGCTAAAGGA...CAACTGCTGGGAGGGTGGGACTGATCCAGTTCGTTTGCTGAATGAATATTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR TCA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCCCATTCCTAAGGAAGTaGAGCCCTTTAACAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SEFPKIQSNMLYQATATTPFLRK*SPLTGC Trigger: ACATCCTGTTAAAGGGCTTCACTTCCTTAGGAATGG...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR GCA 90 bp | CACTGTACAACGGTCACGTCCTCGCTTCTTTGGAAAGGCTATCTGAACACCCAAACATCTTCCAACATCTaGTTTACTCCAGCTGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: HCTTVTSSLLWKGYLNTQTSSNI*FTPAAN Trigger: ATTTGCAGCTGGAGTAAAGCAGATGTTGGAAGATGT...TTGGGTGTTCAGATAGCCTTTCCAAAGAAGCGAGGACGTGACCGTTGTACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CCA 90 bp | TTTCAGAAACAAACAAATCAAAGCACTACAAGAGTCCTCGAACAAGTCCTGCTCCAGATCTCCAGGCGCTaGTTTGTAGCCTGTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FQKQTNQSTTRVLEQVLLQISRR*FVACDV Trigger: GACATCACAGGCTACAAACCAGCGCCTGGAGATCTG...GAGCAGGACTTGTTCGAGGACTCTTGTAGTGCTTTGATTTGTTTGTTTCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| 3UTR CAA 72 bp | AGCAAACGAACTGGATCAGTCCCACCCTCCCAGCAGTaGGTAAGGTATGTGAGTGTTTTCAGAAACAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SKRTGSVPPSQQ*VRYVSVFRNKQ Trigger: TTGTTTGTTTCTGAAAACACTCACATACCTTACCAACTGCTGGGAGGGTGGGACTGATCCAGTTCGTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR TCA 90 bp | CTGTCAGTCTTTGGCATTTTGATCTTCTCTGGCTCACCCAGGTTTCCTTCTGCAGATAAAGTCTCTAAGTaGATGACATGGATGATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVFGILIFSGSPRFPSADKVSK*MTWMIK Trigger: CTTGATCATCCATGTCATTCACTTAGAGACTTTATC...TGCAGAAGGAAACCTGGGTGAGCCAGAGAAGATCAAAATGCCAAAGACTGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCGGACAAGCAATGATTTaGATGTCTTCAGAACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SEFPKIQSNMLYQATATTGQAMI*MSSELN Trigger: GTTCAGTTCTGAAGACATCCAAATCATTGCTTGTCC...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR TCA 90 bp | TCTGAGTTTCCCAAAATACAGAGTAATATGCTCTACCAAGCAACGGCCACCACCATGGTGAATTCAGTGTaGAATGGAGCAATTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEFPKIQSNMLYQATATTMVNSV*NGAICS Trigger: AGAACAAATTGCTCCATTTCACACTGAATTCACCAT...GGTGGTGGCCGTTGCTTGGTAGAGCATATTACTCTGTATTTTGGGAAACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 90 bp | CAATTGGGAGCTCGGCGGGCACCGGCAGGTTCTCCACGGCCGCCTTaGGCTCCAGCACCGAGTCCGTCTGCCTGTCTGTCAGCGGCGCCA | + |
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Preference number: 5 (lower is better) Translates to: QLGARRAPAGSPRPP*APAPSPSACLSAAP Trigger: TGGCGCCGCTGACAGACAGGCAGACGGACTCGGTGCTGGAGCTCAAGGCGGCCGTGGAGAACCTGCCGGTGCCCGCCGAGCTCCCAATTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 90 bp | GGCAGGTTCTCCACGGCCGCCTTGAGCTCCAGCACCGAGTCCGTCTaGCTGTCTGTCAGCGGCGCCATCGAGTCGGGTCTCCCATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRFSTAALSSSTESV*LSVSGAIESGLPSQ Trigger: CTGGGATGGGAGACCCGACTCGATGGCGCCGCTGACAGACAGGCAGACGGACTCGGTGCTGGAGCTCAAGGCGGCCGTGGAGAACCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 90 bp | GGCCACGAGGTCATTGACCTTTGCTGGCTGTGCCCACGGCTGCTGTaGGAGGGTGTACTTGGGGCCTCCCTGGCTGGCCATGGTTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GHEVIDLCWLCPRLL*EGVLGASLAGHGFQ Trigger: TTGAAAACCATGGCCAGCCAGGGAGGCCCCAAGTACACCCTCTCACAGCAGCCGTGGGCACAGCCAGCAAAGGTCAATGACCTCGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 90 bp | GCACTACAGCAGTCAGCTCAATGGGCAGCGACTGGGATGCTAAGCTaGATACATCTTCAATTGGGAGCTCGGCGGGCACCGGCAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALQQSAQWAATGMLS*IHLQLGARRAPAGS Trigger: AGAACCTGCCGGTGCCCGCCGAGCTCCCAATTGAAGATGTATGCAGCTTAGCATCCCAGTCGCTGCCCATTGAGCTGACTGCTGTAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 90 bp | GGCTGTGCCCACGGCTGCTGTGAGAGGGTGTACTTGGGGCCTCCCTaGCTGGCCATGGTTTTCAATGCTGATACCTTTGTCATGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCAHGCCERVYLGPP*LAMVFNADTFVMNS Trigger: GGAGTTCATGACAAAGGTATCAGCATTGAAAACCATGGCCAGCCAGGGAGGCCCCAAGTACACCCTCTCACAGCAGCCGTGGGCACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCTTCTCCACGGCCGCCTaGAGCTCCAGCACCGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: PQKDDSLSPGKARCLLGSFSTAA*SSSTES Trigger: GGACTCGGTGCTGGAGCTCAAGGCGGCCGTGGAGAA...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | ACATGGGGGTCTTGGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCTCTCCTGTCACTGGTGGATGTCATaGAGAAGGTGCTGGTATTCG | + |
|
Preference number: 5 (lower is better) Translates to: TWGSWASCRLQDSSGLSCHWWMS*RRCWYS Trigger: CGAATACCAGCACCTTCTCAATGACATCCACCAGTG...ACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | GCCTCCTCTCCAGGCTGTGCCACGCTAAAACCTCTTCACTGGTCACTCCCACTCTGCAAATGCCCCCAGTaGTTCAGCGTTGTGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSPGCATLKPLHWSLPLCKCPQ*FSVVLY Trigger: GTACAGCACAACGCTGAACAACTGGGGGCATTTGCA...GAGTGGGAGTGACCAGTGAAGAGGTTTTAGCGTGGCACAGCCTGGAGAGGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 90 bp | GTCATGAACTCCTCCAGCTGCTCTACAAACAGCCTGGTCTGCTGCTaGATGAACTGCTCACAGGCTGACTTCAGGTGCCGGTCTACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VMNSSSCSTNSLVCC*MNCSQADFRCRSTS Trigger: GGACGTAGACCGGCACCTGAAGTCAGCCTGTGAGCAGTTCATTCAGCAGCAGACCAGGCTGTTTGTAGAGCAGCTGGAGGAGTTCATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 90 bp | TCTGTAGAGTCAGGCACTACAGCAGTCAGCTCAATGGGCAGCGACTaGGATGCTAAGCTGCATACATCTTCAATTGGGAGCTCGGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVESGTTAVSSMGSD*DAKLHTSSIGSSAG Trigger: GCCCGCCGAGCTCCCAATTGAAGATGTATGCAGCTTAGCATCCCAGTCGCTGCCCATTGAGCTGACTGCTGTAGTGCCTGACTCTACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCGTGGCCACGAGGTCATaGACCTTTGCTGGCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PQKDDSLSPGKARCLLGSVATRS*TFAGCA Trigger: GGCACAGCCAGCAAAGGTCAATGACCTCGTGGCCAC...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | ACATGGGGGTCTTGGGCATCCTGCAGGCTGCAGGACTCCTCAGGCCTCTCCTGTGAACTTCTGGAAGACTaGCTGAATGTTATTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TWGSWASCRLQDSSGLSCELLED*LNVIPD Trigger: GTCAGGAATAACATTCAGCAAGTCTTCCAGAAGTTC...ACAGGAGAGGCCTGAGGAGTCCTGCAGCCTGCAGGATGCCCAAGACCCCCATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 90 bp | GGCCTCCCTGGCTGGCCATGGTTTTCAATGCTGATACCTTTGTCATaGACTCCTCCAGCTGCTCTACAAACAGCCTGGTCTGCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLPGWPWFSMLIPLS*TPPAALQTAWSAAE Trigger: TTCAGCAGCAGACCAGGCTGTTTGTAGAGCAGCTGGAGGAGTTCATGACAAAGGTATCAGCATTGAAAACCATGGCCAGCCAGGGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 90 bp | GACAAGTGTCCTTCGAACTGTGGGATACCACATCCCGTGAAGATCTaGTGGAGAGATCGTCGTCTGTGGTCTAGGATTGAGGGAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DKCPSNCGIPHPVKI*WRDRRLWSRIEGVC Trigger: ACAGACTCCCTCAATCCTAGACCACAGACGACGATCTCTCCAGCAGATCTTCACGGGATGTGGTATCCCACAGTTCGAAGGACACTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | AATCAAAGCACTACAAGAGTCCTCGAACAAGTCCTGCTCTGTCCATCAGACTGCCAGTGTAGGCAATACTaGGGCCCAAAAGGAGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: NQSTTRVLEQVLLCPSDCQCRQY*GPKGAP Trigger: GGGAGCTCCTTTTGGGCCCAAGTATTGCCTACACTG...GCAGTCTGATGGACAGAGCAGGACTTGTTCGAGGACTCTTGTAGTGCTTTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 90 bp | CCTCTCTTGTACATCTTCCAACATCTGCTTTACTCCAGCTGCAAATaGCCCCAGTTGTTCAGCGTTGTGCTGTACGTGGTCTTCAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLLYIFQHLLYSSCK*PQLFSVVLYVVFKH Trigger: GTGCTTGAAGACCACGTACAGCACAACGCTGAACAACTGGGGGCATTTGCAGCTGGAGTAAAGCAGATGTTGGAAGATGTACAAGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 90 bp | CACAAGCCTCTCTTGTACATCTTCCAACATCTGCTTTACTCCAGCTaGAAATGCCCCCAGTTGTTCAGCGTTGTGCTGTACGTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKPLLYIFQHLLYSS*KCPQLFSVVLYVVF Trigger: GAAGACCACGTACAGCACAACGCTGAACAACTGGGGGCATTTGCAGCTGGAGTAAAGCAGATGTTGGAAGATGTACAAGAGAGGCTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | CACCCAGGTTTCCTTCTGCAGGCTGCACATCCATGTTCTACAGGAGCCGTCCCAAAATTCATTGTAAAGTaGGTGCTCATCTTGGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HPGFLLQAAHPCSTGAVPKFIVK*VLILAD Trigger: GTCTGCCAAGATGAGCACCAACTTTACAATGAATTT...TGGGACGGCTCCTGTAGAACATGGATGTGCAGCCTGCAGAAGGAAACCTGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 90 bp | GCTTATCAGGATATGCCAGATCTCCAGGCGCTGGTTTGTAGCCTGTaGTGTCCGTCTGAATGTAGATATGGGTTCGATACACAAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AYQDMPDLQALVCSL*CPSECRYGFDTQAS Trigger: AGAGGCTTGTGTATCGAACCCATATCTACATTCAGACGGACATCACAGGCTACAAACCAGCGCCTGGAGATCTGGCATATCCTGATAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 90 bp | CCAAAAGGAGCTCCCGCTGATCAAGGTAACACTGGTGGATGTCATTaGGAAGGTGCTGGTATTCGGGTATCTTTTCAGATCGTTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PKGAPADQGNTGGCH*EGAGIRVSFQIVAL Trigger: TAGAGCAACGATCTGAAAAGATACCCGAATACCAGCACCTTCTCAATGACATCCACCAGTGTTACCTTGATCAGCGGGAGCTCCTTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 90 bp | ATATGGGTTCGATACACAAGCCTCTCTTGTACATCTTCCAACATCTaGTTTACTCCAGCTGCAAATGCCCCCAGTTGTTCAGCGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IWVRYTSLSCTSSNI*FTPAANAPSCSALC Trigger: GCACAACGCTGAACAACTGGGGGCATTTGCAGCTGGAGTAAAGCAGATGTTGGAAGATGTACAAGAGAGGCTTGTGTATCGAACCCATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | AACAAATATTCATTCAGCAAACGAACTGGATCAGTCCCACCCTCCCAGCAGTTGGTCTGTGGTCTAGGATaGAGGGAGTCTGTTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: NKYSFSKRTGSVPPSQQLVCGLG*RESVEP Trigger: TGGTTCAACAGACTCCCTCAATCCTAGACCACAGAC...CAACTGCTGGGAGGGTGGGACTGATCCAGTTCGTTTGCTGAATGAATATTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | CCACAGAAAGATGACAGCCTGAGTCCAGGAAAAGCTAGATGCCTTCTTGGCAGCAACTCCGTGTCCTTATaGGACAAATACAAAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PQKDDSLSPGKARCLLGSNSVSL*DKYKAM Trigger: CATGGCTTTGTATTTGTCCAATAAGGACACGGAGTT...GCTGCCAAGAAGGCATCTAGCTTTTCCTGGACTCAGGCTGTCATCTTTCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 90 bp | TGCATCTATATAATTTGGAGAGACAGACAAGTGTCCTTCGAACTGTaGGATACCACATCCCGTGAAGATCTGCTGGAGAGATCGTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CIYIIWRDRQVSFEL*DTTSREDLLERSSS Trigger: AGACGACGATCTCTCCAGCAGATCTTCACGGGATGTGGTATCCCACAGTTCGAAGGACACTTGTCTGTCTCTCCAAATTATATAGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | AATCAAAGCACTACAAGAGTCCTCGAACAAGTCCTGCTCTGTCCATCAGACTGCATAAGACAGCTTCTGTaGGATGTGCTCAGCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: NQSTTRVLEQVLLCPSDCIRQLL*DVLSKI Trigger: GATCTTGCTGAGCACATCCAACAGAAGCTGTCTTAT...GCAGTCTGATGGACAGAGCAGGACTTGTTCGAGGACTCTTGTAGTGCTTTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 90 bp | TCTAACCGTACATCTGAAAAGGAAGCTTCTGAAGGCGCCTTCTTCTaGTCATCCTTTAAACTCTGTGCGATTTGCTCCATCATGACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNRTSEKEASEGAFF*SSFKLCAICSIMTS Trigger: GCTAGTCATGATGGAGCAAATCGCACAGAGTTTAAAGGATGAGCAGAAGAAGGCGCCTTCAGAAGCTTCCTTTTCAGATGTACGGTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | CTATCCCTGCTGTCAGTCTTTGGCATTTTGATCTTCTCTGGCTCACCCAGGTTTAATAGTGTGAAGGCATaGTCTGCATTAGGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSVFGILIFSGSPRFNSVKA*SALGTD Trigger: ATCAGTCCCTAATGCAGACAATGCCTTCACACTATT...AAACCTGGGTGAGCCAGAGAAGATCAAAATGCCAAAGACTGACAGCAGGGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | CCCATCATCAAGATACACCTCTCTAGTGAGGAGGATGCAGTTCAAGGAGCCTTAATACACAAGCCTCTCTaGTACATCTTCCAACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PIIKIHLSSEEDAVQGALIHKPL*YIFQHL Trigger: CAGATGTTGGAAGATGTACAAGAGAGGCTTGTGTAT...TAAGGCTCCTTGAACTGCATCCTCCTCACTAGAGAGGTGTATCTTGATGATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 90 bp | CCTGTCTTATTGGACACAAAAAGATACTGTTTCTGCAACGACTCCTaGTGCTGCAGAGCACTGTTCACGTCATTCAGTATAGCATCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PVLLDTKRYCFCNDS*CCRALFTSFSIASH Trigger: GTGTGATGCTATACTGAATGACGTGAACAGTGCTCTGCAGCATCAGGAGTCGTTGCAGAAACAGTATCTTTTTGTGTCCAATAAGACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 90 bp | GTGATAATCCTTGGAACACCGCCCTATCTATGCATCTATATAATTTaGAGAGACAGACAAGTGTCCTTCGAACTGTGGGATACCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: VIILGTPPYLCIYII*RDRQVSFELWDTTS Trigger: GGATGTGGTATCCCACAGTTCGAAGGACACTTGTCTGTCTCTCCAAATTATATAGATGCATAGATAGGGCGGTGTTCCAAGGATTATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 90 bp | TCAGCAAGCTCCGACTGTTCTTTTAGGAGCTGTTCACAGGCTTCATaGAGAGTTCCTGTCTTATTGGACACAAAAAGATACTGTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SASSDCSFRSCSQAS*RVPVLLDTKRYCFC Trigger: GCAGAAACAGTATCTTTTTGTGTCCAATAAGACAGGAACTCTTCATGAAGCCTGTGAACAGCTCCTAAAAGAACAGTCGGAGCTTGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | TTTCAGAAACAAACAAATCAAAGCACTACAAGAGTCCTCGAACAAGTCCTGCTCGCACAATGGTCTCTGTaGTTCTGGCTGGTTAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: FQKQTNQSTTRVLEQVLLAQWSL*FWLVNS Trigger: AGAGTTAACCAGCCAGAACAACAGAGACCATTGTGC...GAGCAGGACTTGTTCGAGGACTCTTGTAGTGCTTTGATTTGTTTGTTTCTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS-3UTR CAA 90 bp | CTATCCCTGCTGTCAGTCTTTGGCATTTTGATCTTCTCTGGCTCACCCAGGTTTATGCATCTATATAATTaGGAGAGACAGACAAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSVFGILIFSGSPRFMHLYN*ERQTSV Trigger: GACACTTGTCTGTCTCTCCAAATTATATAGATGCAT...AAACCTGGGTGAGCCAGAGAAGATCAAAATGCCAAAGACTGACAGCAGGGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 90 bp | TTTGTGAGAGTCTGCAGTGTGTTCACAGTATATGTCTTCATGAGGTaGAAAGCTTTAGAAAGACATTGTTTAAACTTCAGTAAGTATACA | + |
|
Preference number: 5 (lower is better) Translates to: FVRVCSVFTVYVFMR*KALERHCLNFSKYT Trigger: TGTATACTTACTGAAGTTTAAACAATGTCTTTCTAAAGCTTTGCACCTCATGAAGACATATACTGTGAACACACTGCAGACTCTCACAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 90 bp | TCAATTGGGAGCTCGGCGGGCACCGGCAGGTTCTCCACGGCCGCCTaGAGCTCCAGCACCGAGTCCGTCTGCCTGTCTGTCAGCGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SIGSSAGTGRFSTAA*SSSTESVCLSVSGA Trigger: GGCGCCGCTGACAGACAGGCAGACGGACTCGGTGCTGGAGCTCAAGGCGGCCGTGGAGAACCTGCCGGTGCCCGCCGAGCTCCCAATTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 72 bp | AGCTCGGCGGGCACCGGCAGGTTCTCCACGGCCGCCTaGAGCTCCAGCACCGAGTCCGTCTGCCTGTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSAGTGRFSTAA*SSSTESVCLSV Trigger: GACAGACAGGCAGACGGACTCGGTGCTGGAGCTCAAGGCGGCCGTGGAGAACCTGCCGGTGCCCGCCGAGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 72 bp | TCCACGGCCGCCTTGAGCTCCAGCACCGAGTCCGTCTaGCTGTCTGTCAGCGGCGCCATCGAGTCGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: STAALSSSTESV*LSVSGAIESGL Trigger: GAGACCCGACTCGATGGCGCCGCTGACAGACAGGCAGACGGACTCGGTGCTGGAGCTCAAGGCGGCCGTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 72 bp | ACGAGGTCATTGACCTTTGCTGGCTGTGCCCACGGCTaGTGTGAGAGGGTGTACTTGGGGCCTCCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TRSLTFAGCAHG*CERVYLGPPWL Trigger: CAGCCAGGGAGGCCCCAAGTACACCCTCTCACAGCAGCCGTGGGCACAGCCAGCAAAGGTCAATGACCTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 72 bp | GCAGCGACTGGGATGCTAAGCTGCATACATCTTCAATaGGGAGCTCGGCGGGCACCGGCAGGTTCTCCACGG | + |
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Preference number: 6 (lower is better) Translates to: AATGMLSCIHLQ*GARRAPAGSPR Trigger: CCGTGGAGAACCTGCCGGTGCCCGCCGAGCTCCCAATTGAAGATGTATGCAGCTTAGCATCCCAGTCGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | TCCTCCAGCTGCTCTACAAACAGCCTGGTCTGCTGCTaGATGAACTGCTCACAGGCTGACTTCAGGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSCSTNSLVCC*MNCSQADFRCR Trigger: CCGGCACCTGAAGTCAGCCTGTGAGCAGTTCATTCAGCAGCAGACCAGGCTGTTTGTAGAGCAGCTGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 72 bp | CACGGCTGCTGTGAGAGGGTGTACTTGGGGCCTCCCTaGCTGGCCATGGTTTTCAATGCTGATACCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: HGCCERVYLGPP*LAMVFNADTFV Trigger: GACAAAGGTATCAGCATTGAAAACCATGGCCAGCCAGGGAGGCCCCAAGTACACCCTCTCACAGCAGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | CCAGCTGCTCTACAAACAGCCTGGTCTGCTGCTGAATaGACTGCTCACAGGCTGACTTCAGGTGCCGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: PAALQTAWSAAE*TAHRLTSGAGL Trigger: TAGACCGGCACCTGAAGTCAGCCTGTGAGCAGTTCATTCAGCAGCAGACCAGGCTGTTTGTAGAGCAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 72 bp | CCTTCGAACTGTGGGATACCACATCCCGTGAAGATCTaGTGGAGAGATCGTCGTCTGTGGTCTAGGATTGAG | + |
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Preference number: 6 (lower is better) Translates to: PSNCGIPHPVKI*WRDRRLWSRIE Trigger: CTCAATCCTAGACCACAGACGACGATCTCTCCAGCAGATCTTCACGGGATGTGGTATCCCACAGTTCGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 72 bp | TCAGGCACTACAGCAGTCAGCTCAATGGGCAGCGACTaGGATGCTAAGCTGCATACATCTTCAATTGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SGTTAVSSMGSD*DAKLHTSSIGS Trigger: GCTCCCAATTGAAGATGTATGCAGCTTAGCATCCCAGTCGCTGCCCATTGAGCTGACTGCTGTAGTGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 72 bp | TCGAACTGTGGGATACCACATCCCGTGAAGATCTGCTaGAGAGATCGTCGTCTGTGGTCTAGGATTGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SNCGIPHPVKIC*RDRRLWSRIEG Trigger: TCCCTCAATCCTAGACCACAGACGACGATCTCTCCAGCAGATCTTCACGGGATGTGGTATCCCACAGTTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | GGCTGGCCATGGTTTTCAATGCTGATACCTTTGTCATaGACTCCTCCAGCTGCTCTACAAACAGCCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GWPWFSMLIPLS*TPPAALQTAWS Trigger: AGACCAGGCTGTTTGTAGAGCAGCTGGAGGAGTTCATGACAAAGGTATCAGCATTGAAAACCATGGCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 72 bp | TACATCTTCCAACATCTGCTTTACTCCAGCTGCAAATaGCCCCAGTTGTTCAGCGTTGTGCTGTACGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: YIFQHLLYSSCK*PQLFSVVLYVV Trigger: GACCACGTACAGCACAACGCTGAACAACTGGGGGCATTTGCAGCTGGAGTAAAGCAGATGTTGGAAGATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | GCTCCCGCTGATCAAGGTAACACTGGTGGATGTCATTaGGAAGGTGCTGGTATTCGGGTATCTTTTCAGATC | + |
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Preference number: 6 (lower is better) Translates to: APADQGNTGGCH*EGAGIRVSFQI Trigger: GATCTGAAAAGATACCCGAATACCAGCACCTTCTCAATGACATCCACCAGTGTTACCTTGATCAGCGGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | GATATGCCAGATCTCCAGGCGCTGGTTTGTAGCCTGTaGTGTCCGTCTGAATGTAGATATGGGTTCGATACA | + |
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Preference number: 6 (lower is better) Translates to: DMPDLQALVCSL*CPSECRYGFDT Trigger: TGTATCGAACCCATATCTACATTCAGACGGACATCACAGGCTACAAACCAGCGCCTGGAGATCTGGCATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 72 bp | CTCTTGTACATCTTCCAACATCTGCTTTACTCCAGCTaGAAATGCCCCCAGTTGTTCAGCGTTGTGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: LLYIFQHLLYSS*KCPQLFSVVLY Trigger: GTACAGCACAACGCTGAACAACTGGGGGCATTTGCAGCTGGAGTAAAGCAGATGTTGGAAGATGTACAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | GCTCATCCTTTAAACTCTGTGCGATTTGCTCCATCATaGCTAGCTTATCAGGATATGCCAGATCTCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: AHPLNSVRFAPS*LAYQDMPDLQA Trigger: CGCCTGGAGATCTGGCATATCCTGATAAGCTAGTCATGATGGAGCAAATCGCACAGAGTTTAAAGGATGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 72 bp | CGATACACAAGCCTCTCTTGTACATCTTCCAACATCTaGTTTACTCCAGCTGCAAATGCCCCCAGTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: RYTSLSCTSSNI*FTPAANAPSCS Trigger: TGAACAACTGGGGGCATTTGCAGCTGGAGTAAAGCAGATGTTGGAAGATGTACAAGAGAGGCTTGTGTATCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 72 bp | ATAATTTGGAGAGACAGACAAGTGTCCTTCGAACTGTaGGATACCACATCCCGTGAAGATCTGCTGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: IIWRDRQVSFEL*DTTSREDLLER Trigger: TCTCTCCAGCAGATCTTCACGGGATGTGGTATCCCACAGTTCGAAGGACACTTGTCTGTCTCTCCAAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 72 bp | TTTACTCCAGCTGCAAATGCCCCCAGTTGTTCAGCGTaGTGCTGTACGTGGTCTTCAAGCACTTCGTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: FTPAANAPSCSA*CCTWSSSTSFL Trigger: TAAAAACGAAGTGCTTGAAGACCACGTACAGCACAACGCTGAACAACTGGGGGCATTTGCAGCTGGAGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 72 bp | AGATCTGCTGGAGAGATCGTCGTCTGTGGTCTAGGATaGAGGGAGTCTGTTGAACCAGACTTTCTTAAACCA | + |
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Preference number: 6 (lower is better) Translates to: RSAGEIVVCGLG*RESVEPDFLKP Trigger: TGGTTTAAGAAAGTCTGGTTCAACAGACTCCCTCAATCCTAGACCACAGACGACGATCTCTCCAGCAGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS GCA 72 bp | ACATCTGAAAAGGAAGCTTCTGAAGGCGCCTTCTTCTaGTCATCCTTTAAACTCTGTGCGATTTGCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: TSEKEASEGAFF*SSFKLCAICSI Trigger: GATGGAGCAAATCGCACAGAGTTTAAAGGATGAGCAGAAGAAGGCGCCTTCAGAAGCTTCCTTTTCAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 72 bp | CCTTGGAACACCGCCCTATCTATGCATCTATATAATTaGGAGAGACAGACAAGTGTCCTTCGAACTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PWNTALSMHLYN*ERQTSVLRTVG Trigger: TCCCACAGTTCGAAGGACACTTGTCTGTCTCTCCAAATTATATAGATGCATAGATAGGGCGGTGTTCCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 90 bp | ATGTTATTCCTGACAGGCTTAAACAAGATGAACTCCGTGTCCTTATaGGACAAATACAAAGCCATGCTTCTCAGTGTCAGCGGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MLFLTGLNKMNSVSL*DKYKAMLLSVSGSF Trigger: GAAGCTGCCGCTGACACTGAGAAGCATGGCTTTGTATTTGTCCAATAAGGACACGGAGTTCATCTTGTTTAAGCCTGTCAGGAATAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | TTAAGAATCCCACAGAGCTCCGATAAAGTCTCTAAGTaGATGACATGGATGATCAAGGGCCGGAACACATCA | + |
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Preference number: 6 (lower is better) Translates to: LRIPQSSDKVSK*MTWMIKGRNTS Trigger: TGATGTGTTCCGGCCCTTGATCATCCATGTCATTCACTTAGAGACTTTATCGGAGCTCTGTGGGATTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 72 bp | CTTGGAACACCGCCCTATCTATGCATCTATATAATTTaGAGAGACAGACAAGTGTCCTTCGAACTGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LGTPPYLCIYII*RDRQVSFELWD Trigger: ATCCCACAGTTCGAAGGACACTTGTCTGTCTCTCCAAATTATATAGATGCATAGATAGGGCGGTGTTCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 72 bp | AATCGTCTCCAACTCATTAAAATAAGACAGCTTCTGTaGGATGTGCTCAGCAAGATCAGCAAGCTCCGACTG | + |
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Preference number: 6 (lower is better) Translates to: NRLQLIKIRQLL*DVLSKISKLRL Trigger: CAGTCGGAGCTTGCTGATCTTGCTGAGCACATCCAACAGAAGCTGTCTTATTTTAATGAGTTGGAGACGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 72 bp | CTGACAGGCTTAAACAAGATGAACTCCGTGTCCTTATaGGACAAATACAAAGCCATGCTTCTCAGTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LTGLNKMNSVSL*DKYKAMLLSVS Trigger: GCTGACACTGAGAAGCATGGCTTTGTATTTGTCCAATAAGGACACGGAGTTCATCTTGTTTAAGCCTGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | ATCCTGATCCATCTGAGTTTGCAGTTTTGCAAACCATaGGAAAAACTGCTGCGCAGTCTCAATCCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ILIHLSLQFCKP*EKLLRSLNPFF Trigger: GAAGAAAGGATTGAGACTGCGCAGCAGTTTTTCTCATGGTTTGCAAAACTGCAAACTCAGATGGATCAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | TTGGACACAAAAAGATACTGTTTCTGCAACGACTCCTaGTGCTGCAGAGCACTGTTCACGTCATTCAGTATA | + |
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Preference number: 6 (lower is better) Translates to: LDTKRYCFCNDS*CCRALFTSFSI Trigger: TATACTGAATGACGTGAACAGTGCTCTGCAGCATCAGGAGTCGTTGCAGAAACAGTATCTTTTTGTGTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CCA 72 bp | TGTATGCAGGCAGACAAGGCTTCCTGTGATAATCCTTaGAACACCGCCCTATCTATGCATCTATATAATTTG | + |
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Preference number: 6 (lower is better) Translates to: CMQADKASCDNP*NTALSMHLYNL Trigger: CAAATTATATAGATGCATAGATAGGGCGGTGTTCCAAGGATTATCACAGGAAGCCTTGTCTGCCTGCATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS TCA 72 bp | TCCGACTGTTCTTTTAGGAGCTGTTCACAGGCTTCATaGAGAGTTCCTGTCTTATTGGACACAAAAAGATAC | + |
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Preference number: 6 (lower is better) Translates to: SDCSFRSCSQAS*RVPVLLDTKRY Trigger: GTATCTTTTTGTGTCCAATAAGACAGGAACTCTTCATGAAGCCTGTGAACAGCTCCTAAAAGAACAGTCGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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| CDS CAA 72 bp | GGATGCGATGAAATATATGTTATACAATCATCTAACTaGGCCAACATAGGGATAAATCCTTCACTATTCACA | + |
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Preference number: 6 (lower is better) Translates to: GCDEIYVIQSSN*ANIGINPSLFT Trigger: TGTGAATAGTGAAGGATTTATCCCTATGTTGGCCAAGTTAGATGATTGTATAACATATATTTCATCGCATCC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049168.9 |
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