Pregenerated sensors for COG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031979Ensembl transcript IDs: ENSMUST00000034460.11, ENSMUST00000176159.2, ENSMUST00000176279.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTaGTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCG | + |
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Preference number: 1 (lower is better) Translates to: WGQSKFYSALVHPAQ*LPCRARTAHQPHLS Trigger: CGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR TCA 90 bp | CCCAGATGGACGGGCCACTTTGTAGCCTCTAAGGAGGCCCAGGGCTaGCAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: PRWTGHFVASKEAQG*QYLPGRRVGDNQSS Trigger: AGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTCAGCCCTGGGCCTCCTTAGAGGCTACAAAGTGGCCCGTCCATCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR TCA 90 bp | AAAGATGGCCCATATAAGTGGGCGGAGGTACAGGCTGTTGCTGGGTaGCCCGGAGGACAAGGGTTGCTTTCTTCCCTACTCCAGGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: KDGPYKWAEVQAVAG*PGGQGLLSSLLQVL Trigger: CAGGACCTGGAGTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCTCCGCCCACTTATATGGGCCATCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR GCA 90 bp | GACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGCTTaGCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTT | + |
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Preference number: 1 (lower is better) Translates to: DNQSSTLHWCILPSA*PAGPGQPTSHTCRF Trigger: AAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR CAA 90 bp | GGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGCTaGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATT | + |
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Preference number: 2 (lower is better) Translates to: GQSKFYSALVHPAQC*PCRARTAHQPHLSI Trigger: AATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR CAA 90 bp | CCTCTAAGGAGGCCCAGGGCTGACAGTATCTCCCAGGTCGGAGGGTaGGGGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: PLRRPRADSISQVGG*GTIKVLLCIGASCP Trigger: TGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTCAGCCCTGGGCCTCCTTAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTTACCGGAGGACAAGGGTTaGTTTCTTCCCTACTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LALQGQDSPPATLVDLLLPEDKG*FLPYSR Trigger: CCTGGAGTAGGGAAGAAAGCAACCCTTGTCCTCCGG...TAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR CAA 90 bp | GCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTaGTCGATTTACTTTTACCATATTGTAGACATCAGCTGGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: AQCLPCRARTAHQPH*SIYFYHIVDISWST Trigger: TGTAGACCAGCTGATGTCTACAATATGGTAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR-3UTR TCA 90 bp | TGGGGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGCTTGCCCTTGGTTCTTTCTTGGTaGAAGATGGCCCATATAAGT | + |
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Preference number: 2 (lower is better) Translates to: WGQSKFYSALVHPAQCLPLVLSW*KMAHIS Trigger: ACTTATATGGGCCATCTTTCACCAAGAAAGAACCAA...GGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGCTATCTTCCATACAATaGAAAGGCTTTTGGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: GGLGTIKVLLCIGASCPVLSSIQ*KGFWFF Trigger: AAAGAACCAAAAGCCTTTCCATTGTATGGAAGATAG...CACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR TCA 72 bp | ACGGGCCACTTTGTAGCCTCTAAGGAGGCCCAGGGCTaGCAGTATCTCCCAGGTCGGAGGGTTGGGGACAAT | + |
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Preference number: 3 (lower is better) Translates to: TGHFVASKEAQG*QYLPGRRVGDN Trigger: ATTGTCCCCAACCCTCCGACCTGGGAGATACTGTCAGCCCTGGGCCTCCTTAGAGGCTACAAAGTGGCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR GCA 72 bp | TCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTaGTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SKFYSALVHPAQ*LPCRARTAHQP Trigger: TGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR-3UTR CAA 90 bp | TGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTCCCGGAGGACAAGGGTaGCTTTCTTCCCTACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: CLPCRARTAHQPHLSIYFPGGQG*LSSLLQ Trigger: CTGGAGTAGGGAAGAAAGCAACCCTTGTCCTCCGGG...AAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR CCA 72 bp | CGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTaGTGCATCCTGCCCAGTGCTTGCCCTGCAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: RRVGDNQSSTLH*CILPSACPAGP Trigger: TGGCCCTGCAGGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR TCA 72 bp | CCATATAAGTGGGCGGAGGTACAGGCTGTTGCTGGGTaGCCCGGAGGACAAGGGTTGCTTTCTTCCCTACTC | + |
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Preference number: 3 (lower is better) Translates to: PYKWAEVQAVAG*PGGQGLLSSLL Trigger: GAGTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCTCCGCCCACTTATATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR GCA 72 bp | CAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTaGATTGGTGCATCCTGCCCAGTGCTTGCCCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QVGGLGTIKVLL*IGASCPVLALQ Trigger: CTGCAGGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR-3UTR CAA 90 bp | CTGACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCAGCTTTTGGTTCTTTCTaGGTGAAAGATGGCCCATAT | + |
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Preference number: 3 (lower is better) Translates to: LTVSPRSEGWGQSKFYSAAFGSF*VKDGPY Trigger: ATATGGGCCATCTTTCACCAAGAAAGAACCAAAAGC...TGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | CCTGCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGTCCTGCAGCCAGCTCTaGATCACTGCTGGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: PAQCLPCRARTAHQPHLSSCSQL*ITAGCT Trigger: GGTGCAGCCAGCAGTGATGCAGAGCTGGCTGCAGGA...CGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | ATAAGTGGGCGGAGGTACAGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCCCTCGAGCCCGTCTGTaGGGGCTGCTTCCAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: ISGRRYRLLLGDPEDKGCPRARL*GLLPGI Trigger: GATCCCTGGAAGCAGCCCTCACAGACGGGCTCGAGG...GCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCTCCGCCCACTTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGAGGCTTCACCAGGACTTaGCCCACCAGAGCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LPSACPAGPGQPTSHTCRGFTRT*PTRASA Trigger: TGCAGAAGCTCTGGTGGGCCAAGTCCTGGTGAAGCC...TCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGAAGAAGGCGGCAGTGGTaGGGGACAAATTCCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPSACPAGPGQPTSHTCRRRRQW*GTNSRS Trigger: GCTTCTGGAATTTGTCCCTCACCACTGCCGCCTTCT...TCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | CCTGCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGAGTGCCTTTCTCACTTaGCACAGCTCCTCCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: PAQCLPCRARTAHQPHLSSAFLT*HSSSCD Trigger: GTCACAGGAGGAGCTGTGTCAAGTGAGAAAGGCACT...CGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTCGAGTTTCTGCTTaGCCGTCTCCAGGAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LPSACPAGPGQPTSHTCRFRVSA*PSPGGL Trigger: CAGACCTCCTGGAGACGGTCAAGCAGAAACTCGAAA...TCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATGCACTGTCTACATATaGAGAGGCTGTGCTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LPSACPAGPGQPTSHTCRCTVYI*RGCAGD Trigger: GTCCCCAGCACAGCCTCTTCATATGTAGACAGTGCA...TCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | ATAAGTGGGCGGAGGTACAGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCGCAGACAAGGCACTCTaGGAGTCTTCCAGGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: ISGRRYRLLLGDPEDKGCADKAL*ESSRAA Trigger: AGCGGCCCTGGAAGACTCCCAGAGTGCCTTGTCTGC...GCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCTCCGCCCACTTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR CAA 72 bp | AAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGCTaGCCCTGCAGGGCCAGGACAGCCCACCAGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: KFYSALVHPAQC*PCRARTAHQPH Trigger: GTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | CTGCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGACATATGAAGAGGCTGTaGTGGGGACCTCCTTATTGG | + |
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Preference number: 4 (lower is better) Translates to: LPSACPAGPGQPTSHTCRHMKRL*WGPPYW Trigger: CCAATAAGGAGGTCCCCAGCACAGCCTCTTCATATG...TCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | CCTGCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGCAGTCAGACACAAAGTaGTCCACATCGAAATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PAQCLPCRARTAHQPHLSQSDTK*STSKSS Trigger: GGAGGATTTCGATGTGGACCACTTTGTGTCTGACTG...CGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | ATAAGTGGGCGGAGGTACAGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCGAAGTCGCTTTACGCTaGCCTGGGATCCACACTGCC | + |
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Preference number: 4 (lower is better) Translates to: ISGRRYRLLLGDPEDKGCEVALR*PGIHTA Trigger: GGCAGTGTGGATCCCAGGCCAGCGTAAAGCGACTTC...GCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCTCCGCCCACTTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | TGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTCCTGGACAATCCTGCTaGTCAGAGCCGGCACATGGG | + |
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Preference number: 4 (lower is better) Translates to: CLPCRARTAHQPHLSIYFPGQSC*SEPAHG Trigger: CCCATGTGCCGGCTCTGAGCAGCAGGATTGTCCAGG...AAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | TGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTCGCTTTACGCTGGCCTaGGATCCACACTGCCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CLPCRARTAHQPHLSIYFRFTLA*DPHCRS Trigger: TGAGCGGCAGTGTGGATCCCAGGCCAGCGTAAAGCG...AAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | AGGTACAGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTTCCCTACCTGGGTCCCCAGGGTTaGAGAGCGAGGGTAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: RYRLLLGDPEDKGCFLPYLGPQG*RARVAF Trigger: AAAAGCTACCCTCGCTCTTCAACCCTGGGGACCCAG...GTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | CTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTTACAGCCTGCCCAGGTCTaGGACCACATACACCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LALQGQDSPPATLVDLLLQPAQV*DHIHQL Trigger: CAGCTGGTGTATGTGGTCTCAGACCTGGGCAGGCTG...TAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | AGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTTCCCTACTCCAGGCCTCCTTATTGGTCCTaGGGTAAAGCCTGGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: RLLLGDPEDKGCFLPYSRPPYWS*GKAWGP Trigger: AGGTCCCCAGGCTTTACCGCAGGACCAATAAGGAGG...CCTGGAGTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGTGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGAGCCTCGAACTATTTCTaGCCACACAGAATTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: LPSACPAGPGQPTSHTCRASNYF*PHRIHQ Trigger: TTGGTGAATTCTGTGTGGCCAGAAATAGTTCGAGGC...TCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCACTGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | AGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTTCCCTACTCCAGGTGTCCAAAAGGGGCATaGCCTTGCTCTGCACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: RLLLGDPEDKGCFLPYSRCPKGA*PCSAQH Trigger: ATGCTGTGCAGAGCAAGGGCATGCCCCTTTTGGACA...CCTGGAGTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | GGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGTCCTGCGGTAAAGCCTaGGGACCTCCAGGGCACTCT | + |
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Preference number: 4 (lower is better) Translates to: GGLGTIKVLLCIGASCPVSCGKA*GPPGHS Trigger: AGAGTGCCCTGGAGGTCCCCAGGCTTTACCGCAGGA...CACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | TGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTAGGCCTTCCAGAGACTaGTGCAACATGGCTGTGATG | + |
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Preference number: 4 (lower is better) Translates to: CLPCRARTAHQPHLSIYFRPSRD*CNMAVM Trigger: CATCACAGCCATGTTGCAGCAGTCTCTGGAAGGCCT...AAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | CTGACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCACAATGGTGGCATAGGTaGGCAGGCAGTGCCGGACGA | + |
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Preference number: 4 (lower is better) Translates to: LTVSPRSEGWGQSKFYSAQWWHR*AGSAGR Trigger: TCGTCCGGCACTGCCTGCGCACCTATGCCACCATTG...TGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | CTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTTATCCGACAGAGCTTCCTaGAGCCAGCTCTGCATCACT | + |
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Preference number: 4 (lower is better) Translates to: LALQGQDSPPATLVDLLLSDRAS*SQLCIT Trigger: AGTGATGCAGAGCTGGCTGCAGGAAGCTCTGTCGGA...TAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | AGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTTCCCTACTCCAGGCTGAAGCTGGTACAGTaGCTTCAGTGCACTGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: RLLLGDPEDKGCFLPYSRLKLVQ*LQCTVY Trigger: GTAGACAGTGCACTGAAGCCACTGTACCAGCTTCAG...CCTGGAGTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| 3UTR CAA 72 bp | AAGATGGCCCATATAAGTGGGCGGAGGTACAGGCTGTaGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: KMAHISGRRYRL*LGDPEDKGCFL Trigger: AAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCTCCGCCCACTTATATGGGCCATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | TGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTAGCATTTGCCCAGGCTaGTCCATGTTCTGTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: CLPCRARTAHQPHLSIYFSICPG*SMFCEK Trigger: CTTCTCACAGAACATGGATCAGCCTGGGCAAATGCT...AAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | CTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTTAACCACATACACCAGCTaGGTGCTAGAAATGGACGCG | + |
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Preference number: 4 (lower is better) Translates to: LALQGQDSPPATLVDLLLTTYTS*VLEMDA Trigger: CGCGTCCATTTCTAGCACTCAGCTGGTGTATGTGGT...TAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | TGGGGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGCTTGCCCGCTGCACCCGCTTCCTaGAGTCAGACACAAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: WGQSKFYSALVHPAQCLPAAPAS*SQTQSG Trigger: ACCACTTTGTGTCTGACTGCAGGAAGCGGGTGCAGC...GGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | AGGTACAGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTTCCCTACTGCTTCCAGGGATCCTaGCACTTCTCGGAACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: RYRLLLGDPEDKGCFLPYCFQGS*HFSEPY Trigger: ATAAGGTTCCGAGAAGTGGCAGGATCCCTGGAAGCA...GTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | AGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTTCCCTACTCCAGGAAAGGCACAGAAAGTTaGTTGAGGGCTCTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RLLLGDPEDKGCFLPYSRKGTES*LRALSM Trigger: CATGGACAGAGCCCTCAACCAACTTTCTGTGCCTTT...CCTGGAGTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | TATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTGGTGCGCTCTGCATCACTGCTaGCTGCACCTTGTCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: YLPGRRVGDNQSSTLHWCALHHC*LHLVPM Trigger: CATGGGGACAAGGTGCAGCCAGCAGTGATGCAGAGC...GCACCAATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | TGGGGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGCTTGCCCGCACAGAAAGTTGGTTaGGGGCTCTGTCCATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGQSKFYSALVHPAQCLPAQKVG*GLCPCQ Trigger: TTGGCATGGACAGAGCCCTCAACCAACTTTCTGTGC...GGGCAAGCACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | CTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTTACAAAGTACCTGTGTGTaGTGTCCGACAGAGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LALQGQDSPPATLVDLLLQSTCV*CPTELP Trigger: AGGAAGCTCTGTCGGACAGCACACACAGGTACTTTG...TAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | CTGACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATGGGGACCTCCTTATTaGTCCTGCGGTAAAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTVSPRSEGWGQSKFYSAWGPPY*SCGKAW Trigger: CCAGGCTTTACCGCAGGACCAATAAGGAGGTCCCCA...TGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | CTGACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCAGACAGGGTTGGTGGCTaGGGATCTCCTGGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTVSPRSEGWGQSKFYSADRVGG*GSPGLF Trigger: AAACAAGCCAGGAGATCCCCAGCCACCAACCCTGTC...TGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | TATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTGGTGCCCTTCCAGAGACTGCTaGAACATGGCTGTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLPGRRVGDNQSSTLHWCPSRDC*NMAVMP Trigger: TGGCATCACAGCCATGTTGCAGCAGTCTCTGGAAGG...GCACCAATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | GACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTTGCATCACTGCTGGCTaGACCTTGTCCCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSISQVGGLGTIKVLLCICITAG*TLSPCP Trigger: TGGACATGGGGACAAGGTGCAGCCAGCAGTGATGCA...AATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CCA 90 bp | GACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTGAGCTCCATGAGGGCTaGGAAGCTCTTGATGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSISQVGGLGTIKVLLCIELHEG*EALDVA Trigger: AGCGACATCAAGAGCTTCCCAGCCCTCATGGAGCTC...AATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | GGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGGGTTCCACTTATTGCTaGAGTTGTGATAGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGLGTIKVLLCIGASCPVGSTYC*SCDRQG Trigger: ACCCTGCCTATCACAACTTCAGCAATAAGTGGAACC...CACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | AGGTACAGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTTCCCTACCATTCGTTCATCTACTaGCAGAATTCCTTCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RYRLLLGDPEDKGCFLPYHSFIY*QNSFTD Trigger: GTCAGTGAAGGAATTCTGGCAGTAGATGAACGAATG...GTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | CTGACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCAAAAGGGGCATGCCCTTaGTCTGCACAGCATGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LTVSPRSEGWGQSKFYSAKGACP*SAQHET Trigger: AGTTTCATGCTGTGCAGAGCAAGGGCATGCCCCTTT...TGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS-3UTR TCA 90 bp | GGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTGGTGCATCCTGCCCAGTGCTGATCCATGTTCTGTaGGAAGCCAAAAGGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: GGLGTIKVLLCIGASCPVLIHVL*EAKRQY Trigger: GTATTGCCTTTTGGCTTCTCACAGAACATGGATCAG...CACTGGGCAGGATGCACCAATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR TCA 90 bp | GACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTATCTCCTGGCTTGTTTaGGGCGTTTCAGGCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSISQVGGLGTIKVLLCIISWLV*GVSGFP Trigger: AGGAAAGCCTGAAACGCCTCAAACAAGCCAGGAGAT...AATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | AGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTTCCCTACTCCAGGTTCCTAATGTCTTCTTaGTTAGACATTCGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLLGDPEDKGCFLPYSRFLMSS*LDIRSS Trigger: AGATGAACGAATGTCTAAGCAAGAAGACATTAGGAA...CCTGGAGTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR GCA 90 bp | CTTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTGCCAGAATGCTGCACCCGCTTCCTaGAGTCAGACACAAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFLPNVFLLRHSFIYCQNAAPAS*SQTQSG Trigger: ACCACTTTGTGTCTGACTGCAGGAAGCGGGTGCAGC...ATTCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176279.2 |
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| CDS-3UTR GCA 90 bp | CTTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTGCCAGAATCTCAGCTCCTCCAGCTaGACCCGCTTCCTTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLPNVFLLRHSFIYCQNLSSSS*TRFLHE Trigger: TTCATGAAGGAAGCGGGTGCAGCTGGAGGAGCTGAG...ATTCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176159.2 |
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| CDS-3UTR TCA 90 bp | ATCTTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTGCCAGAGCACAGAAAGTTGGTTaGGGGCTCTGTCCATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IFFFLMSSCLDIRSSTARAQKVG*GLCPCQ Trigger: TTGGCATGGACAGAGCCCTCAACCAACTTTCTGTGC...TCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176159.2 ENSMUST00000176279.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTGCCAGAATTGCACAGAAAGTTGGTTaGGGGCTCTGTCCATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FFFLMSSCLDIRSSTARIAQKVG*GLCPCQ Trigger: TTGGCATGGACAGAGCCCTCAACCAACTTTCTGTGC...AATTCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176159.2 ENSMUST00000176279.2 |
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| CDS-3UTR CCA 90 bp | ATCTTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTGCCAGAAAAGGCACAGAAAGTTaGTTGAGGGCTCTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IFFFLMSSCLDIRSSTARKGTES*LRALSM Trigger: CATGGACAGAGCCCTCAACCAACTTTCTGTGCCTTT...TCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176159.2 ENSMUST00000176279.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTGCCAGAATTCAGTCAGACACAAAGTaGTCCACATCGAAATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFFLMSSCLDIRSSTARIQSDTK*STSKSS Trigger: GGAGGATTTCGATGTGGACCACTTTGTGTCTGACTG...AATTCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176279.2 |
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| CDS CCA 90 bp | GACTCACTCAGGTCCTGGACAATCCTGCTGCTCAGAGCCGGCACATaGGCAGACAAGGCACTCTGGGAGTCTTCCAGGGCCGCTGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: DSLRSWTILLLRAGT*ADKALWESSRAAEI Trigger: TATCTCAGCGGCCCTGGAAGACTCCCAGAGTGCCTTGTCTGCCCATGTGCCGGCTCTGAGCAGCAGGATTGTCCAGGACCTGAGTGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS TCA 90 bp | AATGGTGGCATAGGTGCGCAGGCAGTGCCGGACGATGTCCACATCTaGGGTCTGCAAACCTTCCAGCAGGAGGCCTTCCAGAGACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NGGIGAQAVPDDVHI*GLQTFQQEAFQRLL Trigger: CAGCAGTCTCTGGAAGGCCTCCTGCTGGAAGGTTTGCAGACCTCAGATGTGGACATCGTCCGGCACTGCCTGCGCACCTATGCCACCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 90 bp | GTGTGTGCTGTCCGACAGAGCTTCCTGCAGCCAGCTCTGCATCACTaGTGGCTGCACCTTGTCCCCATGTCCACTCTGAAGCTGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: VCAVRQSFLQPALHH*WLHLVPMSTLKLVQ Trigger: CTGTACCAGCTTCAGAGTGGACATGGGGACAAGGTGCAGCCAGCAGTGATGCAGAGCTGGCTGCAGGAAGCTCTGTCGGACAGCACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CCA 90 bp | GATCCATGTTCTGTGAGAAGCCAAAAGGCAATACGGACTTCCAGCTaGGGCGTCCTCGAGCCCGTCTGTGAGGGCTGCTTCCAGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: DPCSVRSQKAIRTSS*GVLEPVCEGCFQGS Trigger: GGATCCCTGGAAGCAGCCCTCACAGACGGGCTCGAGGACGCCCCAGCTGGAAGTCCGTATTGCCTTTTGGCTTCTCACAGAACATGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CCA 90 bp | TGTGCTGTCCGACAGAGCTTCCTGCAGCCAGCTCTGCATCACTGCTaGCTGCACCTTGTCCCCATGTCCACTCTGAAGCTGGTACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CAVRQSFLQPALHHC*LHLVPMSTLKLVQW Trigger: CCACTGTACCAGCTTCAGAGTGGACATGGGGACAAGGTGCAGCCAGCAGTGATGCAGAGCTGGCTGCAGGAAGCTCTGTCGGACAGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CCA 90 bp | CCAGGACTTGGCCCACCAGAGCTTCTGCATCCTGTGTCTTATCAATaGTGGCATAGGTGCGCAGGCAGTGCCGGACGATGTCCACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLGPPELLHPVSYQ*WHRCAGSAGRCPHL Trigger: CAGATGTGGACATCGTCCGGCACTGCCTGCGCACCTATGCCACCATTGATAAGACACAGGATGCAGAAGCTCTGGTGGGCCAAGTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CCA 90 bp | GTCATCACTCATACCACCGCCGCTGGAGCTGACAGGGTTGGTGGCTaGGGATCTCCTGGCTTGTTTGAGGCGTTTCAGGCTTTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VITHTTAAGADRVGG*GSPGLFEAFQAFLH Trigger: ATGGAGGAAAGCCTGAAACGCCTCAAACAAGCCAGGAGATCCCCAGCCACCAACCCTGTCAGCTCCAGCGGCGGTGGTATGAGTGATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CAA 90 bp | CTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTTATGGCTTCACCAGGACTaGGCCCACCAGAGCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LALQGQDSPPATLVDLLLWLHQD*AHQSFC Trigger: GCAGAAGCTCTGGTGGGCCAAGTCCTGGTGAAGCCA...TAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS TCA 90 bp | AGCCATTCCTGCAGCCTGCCCAGGTCTGAGACCACATACACCAGCTaGGTGCTAGAAATGGACGCGGCGCTTGCTTCTGAAGCATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SHSCSLPRSETTYTS*VLEMDAALASEAWL Trigger: AAGCCATGCTTCAGAAGCAAGCGCCGCGTCCATTTCTAGCACTCAGCTGGTGTATGTGGTCTCAGACCTGGGCAGGCTGCAGGAATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 90 bp | TGGCCTGGGATCCACACTGCCGCTCAAACCTCTGCACAAAGTCCATaGTCACAGTGTATTTCTGGTGAAAGGCGTCTGGGTCCCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WPGIHTAAQTSAQSP*SQCISGERRLGPQG Trigger: ACCCTGGGGACCCAGACGCCTTTCACCAGAAATACACTGTGAGCATGGACTTTGTGCAGAGGTTTGAGCGGCAGTGTGGATCCCAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 90 bp | GACACAGTCTCAAAGTACCTGTGTGTGCTGTCCGACAGAGCTTCCTaGAGCCAGCTCTGCATCACTGCTGGCTGCACCTTGTCCCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: DTVSKYLCVLSDRAS*SQLCITAGCTLSPC Trigger: ACATGGGGACAAGGTGCAGCCAGCAGTGATGCAGAGCTGGCTGCAGGAAGCTCTGTCGGACAGCACACACAGGTACTTTGAGACTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 90 bp | AACAGGCAGGTTCCACTTATTGCTGAAGTTGTGATAGGCAGGGTGTaGTCGAAGTCGCTTTACGCTGGCCTGGGATCCACACTGCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NRQVPLIAEVVIGRV*SKSLYAGLGSTLPL Trigger: GAGCGGCAGTGTGGATCCCAGGCCAGCGTAAAGCGACTTCGAGCACACCCTGCCTATCACAACTTCAGCAATAAGTGGAACCTGCCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 90 bp | GCTGGTACAGTGGCTTCAGTGCACTGTCTACATATGAAGAGGCTGTaGTGGGGACCTCCTTATTGGTCCTGCGGTAAAGCCTGGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: AGTVASVHCLHMKRL*WGPPYWSCGKAWGP Trigger: AGGTCCCCAGGCTTTACCGCAGGACCAATAAGGAGGTCCCCAGCACAGCCTCTTCATATGTAGACAGTGCACTGAAGCCACTGTACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CCA 90 bp | GGTACAGTGGCTTCAGTGCACTGTCTACATATGAAGAGGCTGTGCTaGGGACCTCCTTATTGGTCCTGCGGTAAAGCCTGGGGACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTVASVHCLHMKRLC*GPPYWSCGKAWGPP Trigger: TGGAGGTCCCCAGGCTTTACCGCAGGACCAATAAGGAGGTCCCCAGCACAGCCTCTTCATATGTAGACAGTGCACTGAAGCCACTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CAA 90 bp | TGCTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTGATCTCCTGGCTTGTTaGAGGCGTTTCAGGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLPCRARTAHQPHLSIYFDLLAC*RRFRLS Trigger: GGAAAGCCTGAAACGCCTCAAACAAGCCAGGAGATC...AAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS TCA 90 bp | AACATCTCATCGGACCAGCATTTGCCCAGGCTGATCCATGTTCTGTaGGAAGCCAAAAGGCAATACGGACTTCCAGCTGGGGCGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NISSDQHLPRLIHVL*EAKRQYGLPAGASS Trigger: CGAGGACGCCCCAGCTGGAAGTCCGTATTGCCTTTTGGCTTCTCACAGAACATGGATCAGCCTGGGCAAATGCTGGTCCGATGAGATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS TCA 90 bp | CACATACACCAGCTGAGTGCTAGAAATGGACGCGGCGCTTGCTTCTaGAGCATGGCTTCCTTGGTCTTCCGAAGGGTCTTTGCTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HIHQLSARNGRGACF*SMASLVFRRVFAAS Trigger: ACTGGCAGCAAAGACCCTTCGGAAGACCAAGGAAGCCATGCTTCAGAAGCAAGCGCCGCGTCCATTTCTAGCACTCAGCTGGTGTATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 90 bp | TCTGAGGTCTGCAAACCTTCCAGCAGGAGGCCTTCCAGAGACTGCTaGAACATGGCTGTGATGCCAGCTATACGAGGTCTCACTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SEVCKPSSRRPSRDC*NMAVMPAIRGLTLS Trigger: GGACAAAGTGAGACCTCGTATAGCTGGCATCACAGCCATGTTGCAGCAGTCTCTGGAAGGCCTCCTGCTGGAAGGTTTGCAGACCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 90 bp | TCACTGAGTTCAGCACGTCTGACACAGTCTCAAAGTACCTGTGTGTaGTGTCCGACAGAGCTTCCTGCAGCCAGCTCTGCATCACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSARLTQSQSTCV*CPTELPAASSASLL Trigger: CAGCAGTGATGCAGAGCTGGCTGCAGGAAGCTCTGTCGGACAGCACACACAGGTACTTTGAGACTGTGTCAGACGTGCTGAACTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS-3UTR CAA 90 bp | CTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTTATCATCGGACCAGCATTaGCCCAGGCTGATCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LALQGQDSPPATLVDLLLSSDQH*PRLIHV Trigger: AACATGGATCAGCCTGGGCAAATGCTGGTCCGATGA...TAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 90 bp | GAAGGCGGCAGTGGTGAGGGACAAATTCCAGAAGCTTGTTGTACATaGGCTGAAGGCTACTGGGGTGAGACTCAACGAACTGCTCGACGA | + |
|
Preference number: 5 (lower is better) Translates to: EGGSGEGQIPEACCT*AEGYWGETQRTARR Trigger: TCGTCGAGCAGTTCGTTGAGTCTCACCCCAGTAGCCTTCAGCTCATGTACAACAAGCTTCTGGAATTTGTCCCTCACCACTGCCGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 90 bp | CAGCTCTGCATCACTGCTGGCTGCACCTTGTCCCCATGTCCACTCTaGAGCTGGTACAGTGGCTTCAGTGCACTGTCTACATATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLCITAGCTLSPCPL*SWYSGFSALSTYEE Trigger: CTCTTCATATGTAGACAGTGCACTGAAGCCACTGTACCAGCTTCAGAGTGGACATGGGGACAAGGTGCAGCCAGCAGTGATGCAGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 90 bp | ACATCTGAGGTCTGCAAACCTTCCAGCAGGAGGCCTTCCAGAGACTaGTGCAACATGGCTGTGATGCCAGCTATACGAGGTCTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSEVCKPSSRRPSRD*CNMAVMPAIRGLTL Trigger: CAAAGTGAGACCTCGTATAGCTGGCATCACAGCCATGTTGCAGCAGTCTCTGGAAGGCCTCCTGCTGGAAGGTTTGCAGACCTCAGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS-3UTR CAA 90 bp | AGGTACAGGCTGTTGCTGGGTGACCCGGAGGACAAGGGTTGCTTTCTTCCCTACTCAGGAGTGGGCTGCTaGCTTCTTGTGAAGATACAT | + |
|
Preference number: 5 (lower is better) Translates to: RYRLLLGDPEDKGCFLPYSGVGC*LLVKIH Trigger: ATGTATCTTCACAAGAAGCAAGCAGCCCACTCCTGA...GTAGGGAAGAAAGCAACCCTTGTCCTCCGGGTCACCCAGCAACAGCCTGTACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 90 bp | ATTCACCAAGAAATCATAGCCAGGAACGATAGTGCCTTTCTCACTTaGCACAGCTCCTCCTGTGACTTCCCGGAGAAGGCGGCAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IHQEIIARNDSAFLT*HSSSCDFPEKAAVV Trigger: CACCACTGCCGCCTTCTCCGGGAAGTCACAGGAGGAGCTGTGTCAAGTGAGAAAGGCACTATCGTTCCTGGCTATGATTTCTTGGTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 90 bp | TGCTCACAGTGTATTTCTGGTGAAAGGCGTCTGGGTCCCCAGGGTTaGAGAGCGAGGGTAGCTTTTCCTCTAGGCCTCGAACTATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSQCISGERRLGPQG*RARVAFPLGLELFL Trigger: CAGAAATAGTTCGAGGCCTAGAGGAAAAGCTACCCTCGCTCTTCAACCCTGGGGACCCAGACGCCTTTCACCAGAAATACACTGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 90 bp | TCCACTCTGAAGCTGGTACAGTGGCTTCAGTGCACTGTCTACATATaGAGAGGCTGTGCTGGGGACCTCCTTATTGGTCCTGCGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: STLKLVQWLQCTVYI*RGCAGDLLIGPAVK Trigger: CTTTACCGCAGGACCAATAAGGAGGTCCCCAGCACAGCCTCTTCATATGTAGACAGTGCACTGAAGCCACTGTACCAGCTTCAGAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 90 bp | CTGACAGAAAGCTCACTGACAAACACAGAGAATCTGGCCAGAATCTaGAGCGTGAGCCTCCACAGACGGTGTGCCAACAAAGGTAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTESSLTNTENLARI*SVSLHRRCANKGRN Trigger: GTTCCTACCTTTGTTGGCACACCGTCTGTGGAGGCTCACGCTGCAGATTCTGGCCAGATTCTCTGTGTTTGTCAGTGAGCTTTCTGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS-3UTR CAA 90 bp | GACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTGGCACAGAAAGTTGGTaGAGGGCTCTGTCCATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSISQVGGLGTIKVLLCIGTESW*RALSMP Trigger: TGGCATGGACAGAGCCCTCAACCAACTTTCTGTGCC...AATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS-3UTR CAA 90 bp | GACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTATACGAGGTCTCACTTaGTCCAAAAGGGGCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DSISQVGGLGTIKVLLCIIRGLT*SKRGMP Trigger: GGGCATGCCCCTTTTGGACAAAGTGAGACCTCGTAT...AATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS-3UTR CAA 90 bp | CTTGCCCTGCAGGGCCAGGACAGCCCACCAGCCACACTTGTCGATTTACTTTTAGGCTTTTTAGTCTCCTaGGCACTCTCATTAGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: LALQGQDSPPATLVDLLLGFLVS*ALSLET Trigger: CGTTTCTAATGAGAGTGCCAAGGAGACTAAAAAGCC...TAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCCTGGCCCTGCAGGGCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS-3UTR CAA 90 bp | GACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTCTGCAAGCCCATCCTTaGTATCTGTTCTCCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DSISQVGGLGTIKVLLCILQAHP*YLFSQV Trigger: CACCTGGGAGAACAGATACAAAGGATGGGCTTGCAG...AATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 90 bp | CCAACAAAGGTAGGAACATCTCATCGGACCAGCATTTGCCCAGGCTaGTCCATGTTCTGTGAGAAGCCAAAAGGCAATACGGACTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PTKVGTSHRTSICPG*SMFCEKPKGNTDFQ Trigger: CTGGAAGTCCGTATTGCCTTTTGGCTTCTCACAGAACATGGATCAGCCTGGGCAAATGCTGGTCCGATGAGATGTTCCTACCTTTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CCA 90 bp | AGACTCAGAACCTCTTCTCGTAACTGTCCCAAAGGCACAGAAAGTTaGTTGAGGGCTCTGTCCATGCCAACCAGGTTTGTTGAGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLRTSSRNCPKGTES*LRALSMPTRFVERL Trigger: CAACCTCTCAACAAACCTGGTTGGCATGGACAGAGCCCTCAACCAACTTTCTGTGCCTTTGGGACAGTTACGAGAAGAGGTTCTGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034460.11 ENSMUST00000176159.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTCAAAGGCACAGAAAGTaGGTTGAGGGCTCTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DSISQVGGLGTIKVLLCIQRHRK*VEGSVH Trigger: ATGGACAGAGCCCTCAACCAACTTTCTGTGCCTTTG...AATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 90 bp | CTCGGAACCTTATCTGAAAGTAAACAGGCAGGTTCCACTTATTGCTaGAGTTGTGATAGGCAGGGTGTGCTCGAAGTCGCTTTACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGTLSESKQAGSTYC*SCDRQGVLEVALRW Trigger: CCAGCGTAAAGCGACTTCGAGCACACCCTGCCTATCACAACTTCAGCAATAAGTGGAACCTGCCTGTTTACTTTCAGATAAGGTTCCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 90 bp | GCTGAGATAGACGAAAAATTCTTAAAGCCAATCATTTCGAGTTTCTaGTTGACCGTCTCCAGGAGGTCTGGAAGCCATTCCTGCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AEIDEKFLKPIISSF*LTVSRRSGSHSCSL Trigger: CAGGCTGCAGGAATGGCTTCCAGACCTCCTGGAGACGGTCAAGCAGAAACTCGAAATGATTGGCTTTAAGAATTTTTCGTCTATCTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS-3UTR CAA 90 bp | GACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTCTTCCTAATGTCTTCTaGCTTAGACATTCGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: DSISQVGGLGTIKVLLCILPNVF*LRHSFI Trigger: GATGAACGAATGTCTAAGCAAGAAGACATTAGGAAG...AATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS-3UTR CAA 90 bp | ATCTTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTGCCAGAGGCACAGAAAGTTGGTaGAGGGCTCTGTCCATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IFFFLMSSCLDIRSSTARGTESW*RALSMP Trigger: TGGCATGGACAGAGCCCTCAACCAACTTTCTGTGCC...TCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176159.2 ENSMUST00000176279.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTGCCAGAATGGCACAGAAAGTTGGTaGAGGGCTCTGTCCATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFLPNVFLLRHSFIYCQNGTESW*RALSMP Trigger: TGGCATGGACAGAGCCCTCAACCAACTTTCTGTGCC...ATTCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176159.2 ENSMUST00000176279.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTATCTCCCAGGTCGGAGGGTTGGGGACAATCAAAGTTCTACTCTGCATTAACCGATCGAATAACTaGTATAAGTCTCAACACACT | + |
|
Preference number: 5 (lower is better) Translates to: DSISQVGGLGTIKVLLCINRSNN*YKSQHT Trigger: AGTGTGTTGAGACTTATACAAGTTATTCGATCGGTT...AATGCAGAGTAGAACTTTGATTGTCCCCAACCCTCCGACCTGGGAGATACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS-3UTR CAA 90 bp | CATCTTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTGCCAGCAAAGGCACAGAAAGTaGGTTGAGGGCTCTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HLFLPNVFLLRHSFIYCQQRHRK*VEGSVH Trigger: ATGGACAGAGCCCTCAACCAACTTTCTGTGCCTTTG...CTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176159.2 ENSMUST00000176279.2 |
||
| CDS GCA 90 bp | CTTTTTCTTCCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTaGCAGAATTCCTTCACTGACAGAGGACCTAAGACTCAGAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLPNVFLLRHSFIY*QNSFTDRGPKTQNL Trigger: GAGGTTCTGAGTCTTAGGTCCTCTGTCAGTGAAGGAATTCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGGAAGAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 72 bp | TCCAGCTGGGGCGTCCTCGAGCCCGTCTGTGAGGGCTaGTTCCAGGGATCCTGCCACTTCTCGGAACCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: SSWGVLEPVCEG*FQGSCHFSEPY Trigger: ATAAGGTTCCGAGAAGTGGCAGGATCCCTGGAAGCAGCCCTCACAGACGGGCTCGAGGACGCCCCAGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CAA 72 bp | AGGTGCTCCACGTCCAGGGCCAGCTGCAGTCGGATCTaGTCGTCATCACTCATACCACCGCCGCTGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RCSTSRASCSRI*SSSLIPPPLEL Trigger: CAGCTCCAGCGGCGGTGGTATGAGTGATGACGACAAGATCCGACTGCAGCTGGCCCTGGACGTGGAGCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CAA 90 bp | TGTTCTCCCAGGTGCTCCACGTCCAGGGCCAGCTGCAGTCGGATCTaGTCGTCATCACTCATACCACCGCCGCTGGAGCTGACAGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSPRCSTSRASCSRI*SSSLIPPPLELTGL Trigger: CAACCCTGTCAGCTCCAGCGGCGGTGGTATGAGTGATGACGACAAGATCCGACTGCAGCTGGCCCTGGACGTGGAGCACCTGGGAGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 72 bp | CGCAGGCAGTGCCGGACGATGTCCACATCTGAGGTCTaGAAACCTTCCAGCAGGAGGCCTTCCAGAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRQCRTMSTSEV*KPSSRRPSRDC Trigger: GCAGTCTCTGGAAGGCCTCCTGCTGGAAGGTTTGCAGACCTCAGATGTGGACATCGTCCGGCACTGCCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 72 bp | CCGTCTCCAGGAGGTCTGGAAGCCATTCCTGCAGCCTaGCCAGGTCTGAGACCACATACACCAGCTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSPGGLEAIPAA*PGLRPHTPAEC Trigger: GCACTCAGCTGGTGTATGTGGTCTCAGACCTGGGCAGGCTGCAGGAATGGCTTCCAGACCTCCTGGAGACGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CCA 72 bp | CATACCACCGCCGCTGGAGCTGACAGGGTTGGTGGCTaGGGATCTCCTGGCTTGTTTGAGGCGTTTCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HTTAAGADRVGG*GSPGLFEAFQA Trigger: AGCCTGAAACGCCTCAAACAAGCCAGGAGATCCCCAGCCACCAACCCTGTCAGCTCCAGCGGCGGTGGTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CCA 72 bp | CTGGTCCCTGGCAGCAAGGACGAGCTCCATGAGGGCTaGGAAGCTCTTGATGTCGCTGGTCTGCAAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LVPGSKDELHEG*EALDVAGLQAH Trigger: ATGGGCTTGCAGACCAGCGACATCAAGAGCTTCCCAGCCCTCATGGAGCTCGTCCTTGCTGCCAGGGACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CAA 90 bp | GAGGGCTGGGAAGCTCTTGATGTCGCTGGTCTGCAAGCCCATCCTTaGTATCTGTTCTCCCAGGTGCTCCACGTCCAGGGCCAGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EGWEALDVAGLQAHP*YLFSQVLHVQGQLQ Trigger: CTGCAGCTGGCCCTGGACGTGGAGCACCTGGGAGAACAGATACAAAGGATGGGCTTGCAGACCAGCGACATCAAGAGCTTCCCAGCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 72 bp | ATAGGTGCGCAGGCAGTGCCGGACGATGTCCACATCTaGGGTCTGCAAACCTTCCAGCAGGAGGCCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: IGAQAVPDDVHI*GLQTFQQEAFQ Trigger: CTGGAAGGCCTCCTGCTGGAAGGTTTGCAGACCTCAGATGTGGACATCGTCCGGCACTGCCTGCGCACCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 72 bp | GTCCGACAGAGCTTCCTGCAGCCAGCTCTGCATCACTaGTGGCTGCACCTTGTCCCCATGTCCACTCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VRQSFLQPALHH*WLHLVPMSTLK Trigger: CTTCAGAGTGGACATGGGGACAAGGTGCAGCCAGCAGTGATGCAGAGCTGGCTGCAGGAAGCTCTGTCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CCA 72 bp | TCTGTGAGAAGCCAAAAGGCAATACGGACTTCCAGCTaGGGCGTCCTCGAGCCCGTCTGTGAGGGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVRSQKAIRTSS*GVLEPVCEGCF Trigger: GAAGCAGCCCTCACAGACGGGCTCGAGGACGCCCCAGCTGGAAGTCCGTATTGCCTTTTGGCTTCTCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CCA 72 bp | CGACAGAGCTTCCTGCAGCCAGCTCTGCATCACTGCTaGCTGCACCTTGTCCCCATGTCCACTCTGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RQSFLQPALHHC*LHLVPMSTLKL Trigger: CAGCTTCAGAGTGGACATGGGGACAAGGTGCAGCCAGCAGTGATGCAGAGCTGGCTGCAGGAAGCTCTGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 72 bp | ATCTGTTCTCCCAGGTGCTCCACGTCCAGGGCCAGCTaGAGTCGGATCTTGTCGTCATCACTCATACCACCG | + |
|
Preference number: 6 (lower is better) Translates to: ICSPRCSTSRAS*SRILSSSLIPP Trigger: CGGTGGTATGAGTGATGACGACAAGATCCGACTGCAGCTGGCCCTGGACGTGGAGCACCTGGGAGAACAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 72 bp | GTCTGCAAGCCCATCCTTTGTATCTGTTCTCCCAGGTaGTCCACGTCCAGGGCCAGCTGCAGTCGGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VCKPILCICSPR*STSRASCSRIL Trigger: CAAGATCCGACTGCAGCTGGCCCTGGACGTGGAGCACCTGGGAGAACAGATACAAAGGATGGGCTTGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CCA 72 bp | GGCCCACCAGAGCTTCTGCATCCTGTGTCTTATCAATaGTGGCATAGGTGCGCAGGCAGTGCCGGACGATGT | + |
|
Preference number: 6 (lower is better) Translates to: GPPELLHPVSYQ*WHRCAGSAGRC Trigger: ACATCGTCCGGCACTGCCTGCGCACCTATGCCACCATTGATAAGACACAGGATGCAGAAGCTCTGGTGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CCA 72 bp | TGTGATAGGCAGGGTGTGCTCGAAGTCGCTTTACGCTaGCCTGGGATCCACACTGCCGCTCAAACCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CDRQGVLEVALR*PGIHTAAQTSA Trigger: TGCAGAGGTTTGAGCGGCAGTGTGGATCCCAGGCCAGCGTAAAGCGACTTCGAGCACACCCTGCCTATCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CCA 72 bp | CTGCTCAGAGCCGGCACATGGGCAGACAAGGCACTCTaGGAGTCTTCCAGGGCCGCTGAGATAGACGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLRAGTWADKAL*ESSRAAEIDEK Trigger: TTTTTCGTCTATCTCAGCGGCCCTGGAAGACTCCCAGAGTGCCTTGTCTGCCCATGTGCCGGCTCTGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CCA 72 bp | CTACATATGAAGAGGCTGTGCTGGGGACCTCCTTATTaGTCCTGCGGTAAAGCCTGGGGACCTCCAGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LHMKRLCWGPPY*SCGKAWGPPGH Trigger: GTGCCCTGGAGGTCCCCAGGCTTTACCGCAGGACCAATAAGGAGGTCCCCAGCACAGCCTCTTCATATGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CAA 90 bp | CCGCTGGAGCTGACAGGGTTGGTGGCTGGGGATCTCCTGGCTTGTTaGAGGCGTTTCAGGCTTTCCTCCATCTTCTTCACTGAGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLELTGLVAGDLLAC*RRFRLSSIFFTEFS Trigger: GCTGAACTCAGTGAAGAAGATGGAGGAAAGCCTGAAACGCCTCAAACAAGCCAGGAGATCCCCAGCCACCAACCCTGTCAGCTCCAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CAA 90 bp | ATCTTGTCGTCATCACTCATACCACCGCCGCTGGAGCTGACAGGGTaGGTGGCTGGGGATCTCCTGGCTTGTTTGAGGCGTTTCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILSSSLIPPPLELTG*VAGDLLACLRRFRL Trigger: AAGCCTGAAACGCCTCAAACAAGCCAGGAGATCCCCAGCCACCAACCCTGTCAGCTCCAGCGGCGGTGGTATGAGTGATGACGACAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 72 bp | TGCAGCCTGCCCAGGTCTGAGACCACATACACCAGCTaGGTGCTAGAAATGGACGCGGCGCTTGCTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSLPRSETTYTS*VLEMDAALASE Trigger: TTCAGAAGCAAGCGCCGCGTCCATTTCTAGCACTCAGCTGGTGTATGTGGTCTCAGACCTGGGCAGGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CCA 72 bp | ATGGACGCGGCGCTTGCTTCTGAAGCATGGCTTCCTTaGTCTTCCGAAGGGTCTTTGCTGCCAGTCAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MDAALASEAWLP*SSEGSLLPVKG Trigger: GCCTTTGACTGGCAGCAAAGACCCTTCGGAAGACCAAGGAAGCCATGCTTCAGAAGCAAGCGCCGCGTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CAA 72 bp | GAAGCTCTTGATGTCGCTGGTCTGCAAGCCCATCCTTaGTATCTGTTCTCCCAGGTGCTCCACGTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EALDVAGLQAHP*YLFSQVLHVQG Trigger: GCCCTGGACGTGGAGCACCTGGGAGAACAGATACAAAGGATGGGCTTGCAGACCAGCGACATCAAGAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 72 bp | GCTCCTCCTGTGACTTCCCGGAGAAGGCGGCAGTGGTaGGGGACAAATTCCAGAAGCTTGTTGTACATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: APPVTSRRRRQW*GTNSRSLLYMS Trigger: GCTCATGTACAACAAGCTTCTGGAATTTGTCCCTCACCACTGCCGCCTTCTCCGGGAAGTCACAGGAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 72 bp | GTCTGCAAACCTTCCAGCAGGAGGCCTTCCAGAGACTaGTGCAACATGGCTGTGATGCCAGCTATACGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VCKPSSRRPSRD*CNMAVMPAIRG Trigger: ACCTCGTATAGCTGGCATCACAGCCATGTTGCAGCAGTCTCTGGAAGGCCTCCTGCTGGAAGGTTTGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS GCA 72 bp | TCCATGAGGGCTGGGAAGCTCTTGATGTCGCTGGTCTaGAAGCCCATCCTTTGTATCTGTTCTCCCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SMRAGKLLMSLV*KPILCICSPRC Trigger: GCACCTGGGAGAACAGATACAAAGGATGGGCTTGCAGACCAGCGACATCAAGAGCTTCCCAGCCCTCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 72 bp | TGTATTTCTGGTGAAAGGCGTCTGGGTCCCCAGGGTTaGAGAGCGAGGGTAGCTTTTCCTCTAGGCCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: CISGERRLGPQG*RARVAFPLGLE Trigger: TTCGAGGCCTAGAGGAAAAGCTACCCTCGCTCTTCAACCCTGGGGACCCAGACGCCTTTCACCAGAAATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 72 bp | TCGGACCAGCATTTGCCCAGGCTGATCCATGTTCTGTaGGAAGCCAAAAGGCAATACGGACTTCCAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SDQHLPRLIHVL*EAKRQYGLPAG Trigger: CCCAGCTGGAAGTCCGTATTGCCTTTTGGCTTCTCACAGAACATGGATCAGCCTGGGCAAATGCTGGTCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS TCA 72 bp | ATCACTGCTGGCTGCACCTTGTCCCCATGTCCACTCTaGAGCTGGTACAGTGGCTTCAGTGCACTGTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: ITAGCTLSPCPL*SWYSGFSALST Trigger: TGTAGACAGTGCACTGAAGCCACTGTACCAGCTTCAGAGTGGACATGGGGACAAGGTGCAGCCAGCAGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CCA 72 bp | TCCAGCTGCACCCGCTTCCTGCAGTCAGACACAAAGTaGTCCACATCGAAATCCTCCTTCATGAACTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSCTRFLQSDTK*STSKSSFMNSS Trigger: GGACGAGTTCATGAAGGAGGATTTCGATGTGGACCACTTTGTGTCTGACTGCAGGAAGCGGGTGCAGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034460.11 ENSMUST00000176279.2 |
||
| CDS CCA 72 bp | GCTTCAGTGCACTGTCTACATATGAAGAGGCTGTGCTaGGGACCTCCTTATTGGTCCTGCGGTAAAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASVHCLHMKRLC*GPPYWSCGKAW Trigger: CCAGGCTTTACCGCAGGACCAATAAGGAGGTCCCCAGCACAGCCTCTTCATATGTAGACAGTGCACTGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
||
| CDS CAA 72 bp | CTGACAGGGTTGGTGGCTGGGGATCTCCTGGCTTGTTaGAGGCGTTTCAGGCTTTCCTCCATCTTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: LTGLVAGDLLAC*RRFRLSSIFFT Trigger: AGTGAAGAAGATGGAGGAAAGCCTGAAACGCCTCAAACAAGCCAGGAGATCCCCAGCCACCAACCCTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS TCA 72 bp | GAAATCATAGCCAGGAACGATAGTGCCTTTCTCACTTaGCACAGCTCCTCCTGTGACTTCCCGGAGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: EIIARNDSAFLT*HSSSCDFPEKA Trigger: CGCCTTCTCCGGGAAGTCACAGGAGGAGCTGTGTCAAGTGAGAAAGGCACTATCGTTCCTGGCTATGATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 72 bp | GTTCCACTTATTGCTGAAGTTGTGATAGGCAGGGTGTaGTCGAAGTCGCTTTACGCTGGCCTGGGATCCACA | + |
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Preference number: 6 (lower is better) Translates to: VPLIAEVVIGRV*SKSLYAGLGST Trigger: TGTGGATCCCAGGCCAGCGTAAAGCGACTTCGAGCACACCCTGCCTATCACAACTTCAGCAATAAGTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 72 bp | AGCTCACTGACAAACACAGAGAATCTGGCCAGAATCTaGAGCGTGAGCCTCCACAGACGGTGTGCCAACAAA | + |
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Preference number: 6 (lower is better) Translates to: SSLTNTENLARI*SVSLHRRCANK Trigger: TTTGTTGGCACACCGTCTGTGGAGGCTCACGCTGCAGATTCTGGCCAGATTCTCTGTGTTTGTCAGTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CAA 72 bp | AACATGGCTGTGATGCCAGCTATACGAGGTCTCACTTaGTCCAAAAGGGGCATGCCCTTGCTCTGCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: NMAVMPAIRGLT*SKRGMPLLCTA Trigger: TGCTGTGCAGAGCAAGGGCATGCCCCTTTTGGACAAAGTGAGACCTCGTATAGCTGGCATCACAGCCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 72 bp | CAGCTATACGAGGTCTCACTTTGTCCAAAAGGGGCATaGCCTTGCTCTGCACAGCATGAAACTGAAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: QLYEVSLCPKGA*PCSAQHETEAG Trigger: ACCAGCTTCAGTTTCATGCTGTGCAGAGCAAGGGCATGCCCCTTTTGGACAAAGTGAGACCTCGTATAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 72 bp | ATCCACACTGCCGCTCAAACCTCTGCACAAAGTCCATaGTCACAGTGTATTTCTGGTGAAAGGCGTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: IHTAAQTSAQSP*SQCISGERRLG Trigger: ACCCAGACGCCTTTCACCAGAAATACACTGTGAGCATGGACTTTGTGCAGAGGTTTGAGCGGCAGTGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS TCA 72 bp | GTAGGAACATCTCATCGGACCAGCATTTGCCCAGGCTaGTCCATGTTCTGTGAGAAGCCAAAAGGCAATACG | + |
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Preference number: 6 (lower is better) Translates to: VGTSHRTSICPG*SMFCEKPKGNT Trigger: CGTATTGCCTTTTGGCTTCTCACAGAACATGGATCAGCCTGGGCAAATGCTGGTCCGATGAGATGTTCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CCA 72 bp | ACCTCTTCTCGTAACTGTCCCAAAGGCACAGAAAGTTaGTTGAGGGCTCTGTCCATGCCAACCAGGTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: TSSRNCPKGTES*LRALSMPTRFV Trigger: AACAAACCTGGTTGGCATGGACAGAGCCCTCAACCAACTTTCTGTGCCTTTGGGACAGTTACGAGAAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034460.11 ENSMUST00000176159.2 ENSMUST00000176279.2 |
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| CDS CAA 72 bp | GGGTCTTTGCTGCCAGTCAAAGGCTTTTTAGTCTCCTaGGCACTCTCATTAGAAACGGGCCTGACAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GSLLPVKGFLVS*ALSLETGLTES Trigger: GCTTTCTGTCAGGCCCGTTTCTAATGAGAGTGCCAAGGAGACTAAAAAGCCTTTGACTGGCAGCAAAGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CAA 90 bp | TCTTCCGAAGGGTCTTTGCTGCCAGTCAAAGGCTTTTTAGTCTCCTaGGCACTCTCATTAGAAACGGGCCTGACAGAAAGCTCACTGACA | + |
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Preference number: 6 (lower is better) Translates to: SSEGSLLPVKGFLVS*ALSLETGLTESSLT Trigger: TGTCAGTGAGCTTTCTGTCAGGCCCGTTTCTAATGAGAGTGCCAAGGAGACTAAAAAGCCTTTGACTGGCAGCAAAGACCCTTCGGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CAA 90 bp | GAGATAGACGAAAAATTCTTAAAGCCAATCATTTCGAGTTTCTGCTaGACCGTCTCCAGGAGGTCTGGAAGCCATTCCTGCAGCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: EIDEKFLKPIISSFC*TVSRRSGSHSCSLP Trigger: GGGCAGGCTGCAGGAATGGCTTCCAGACCTCCTGGAGACGGTCAAGCAGAAACTCGAAATGATTGGCTTTAAGAATTTTTCGTCTATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CCA 72 bp | ACGATTACCTCATTGACATATGGCTTCACCAGGACTTaGCCCACCAGAGCTTCTGCATCCTGTGTCTTATCA | + |
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Preference number: 6 (lower is better) Translates to: TITSLTYGFTRT*PTRASASCVLS Trigger: TGATAAGACACAGGATGCAGAAGCTCTGGTGGGCCAAGTCCTGGTGAAGCCATATGTCAATGAGGTAATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 72 bp | GACGAAAAATTCTTAAAGCCAATCATTTCGAGTTTCTaGTTGACCGTCTCCAGGAGGTCTGGAAGCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: DEKFLKPIISSF*LTVSRRSGSHS Trigger: GGAATGGCTTCCAGACCTCCTGGAGACGGTCAAGCAGAAACTCGAAATGATTGGCTTTAAGAATTTTTCGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS CAA 72 bp | GAAAAATTCTTAAAGCCAATCATTTCGAGTTTCTGCTaGACCGTCTCCAGGAGGTCTGGAAGCCATTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: EKFLKPIISSFC*TVSRRSGSHSC Trigger: GCAGGAATGGCTTCCAGACCTCCTGGAGACGGTCAAGCAGAAACTCGAAATGATTGGCTTTAAGAATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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| CDS GCA 72 bp | CCTAATGTCTTCTTGCTTAGACATTCGTTCATCTACTaGCAGAATTCCTTCACTGACAGAGGACCTAAGACT | + |
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Preference number: 6 (lower is better) Translates to: PNVFLLRHSFIY*QNSFTDRGPKT Trigger: AGTCTTAGGTCCTCTGTCAGTGAAGGAATTCTGGCAGTAGATGAACGAATGTCTAAGCAAGAAGACATTAGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034460.11 |
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