RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COG1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018661

Ensembl transcript IDs: ENSMUST00000018805.15, ENSMUST00000063776.14, ENSMUST00000134418.8, ENSMUST00000137878.2, ENSMUST00000142069.8, ENSMUST00000148736.8, ENSMUST00000152653.8

Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGACCAAGTGCAGGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTaGCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTG +
Preference number: 1 (lower is better)
Translates to: RPSAGCLLTPRAPQP*RGPTFCHGTGKIGV
Trigger: CACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR CCA 90 bp CCATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTaGCTGGGAGGGCGGGGCCAGACAGCACAGGGCACTGGGTGCTTT +
Preference number: 1 (lower is better)
Translates to: PFLVSRLGRNLAFHL*LGGRGQTAQGTGCF
Trigger: AAAGCACCCAGTGCCCTGTGCTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
3UTR TCA 90 bp AAGGCACAGGGGAGACATCTGAAGACAAAGGCTCTTCCCATGCTCTaGCCAGTGTCGGGGTGCCAGTCAACAGTCATTCGCCCTACAGGA +
Preference number: 1 (lower is better)
Translates to: KAQGRHLKTKALPML*PVSGCQSTVIRPTG
Trigger: TCCTGTAGGGCGAATGACTGTTGACTGGCACCCCGACACTGGTCAGAGCATGGGAAGAGCCTTTGTCTTCAGATGTCTCCCCTGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
3UTR CCA 90 bp AGGGAGGGGTTGGAAGAACCACGAGAGCCTCTTTTGGCACTGACCTaGGCTTGGGTTTCAACGCTTCTACTGGTTGCCCTCGCCTTTCTT +
Preference number: 1 (lower is better)
Translates to: REGLEEPREPLLALT*AWVSTLLLVALAFL
Trigger: AAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCCAAAAGAGGCTCTCGTGGTTCTTCCAACCCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR TCA 90 bp ATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTaGATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACTCTGGAGA +
Preference number: 1 (lower is better)
Translates to: IMKVQVSRLPRLQAA*IRSQDASSGHLLWR
Trigger: TCTCCAGAGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR CCA 90 bp CCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTaGTGTGGTGTAGAAACAGGAGCAGAGGCACCTCTAGGAAAAACA +
Preference number: 1 (lower is better)
Translates to: PALPGAHILSWNWKD*CGVETGAEAPLGKT
Trigger: TGTTTTTCCTAGAGGTGCCTCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR TCA 90 bp CCCCTTGCAGCCCTCGAGTTAATGTTAAAAGTTAGCATCACCTGGTaGGAGGGCGTGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTG +
Preference number: 1 (lower is better)
Translates to: PLAALELMLKVSITW*EGVARLCPFLVSRL
Trigger: CAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAGGTGATGCTAACTTTTAACATTAACTCGAGGGCTGCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
3UTR GCA 90 bp TTGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACTCTG +
Preference number: 1 (lower is better)
Translates to: LNNEGAGESSSSLAS*LNKEPGCVVGSPTL
Trigger: CAGAGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR GCA 90 bp AACAGTCATTCGCCCTACAGGATACAAGAGGCCATCTCTATCGTGTaGTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTT +
Preference number: 1 (lower is better)
Translates to: NSHSPYRIQEAISIV*CAVSTACGLALGIF
Trigger: AAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCTCTTGTATCCTGTAGGGCGAATGACTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
3UTR GCA 90 bp GCATCTTTCTATGAGCTCCAGCTAGTGAAACCCTGTACACTCTATTaGGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCGTATGATGCC +
Preference number: 1 (lower is better)
Translates to: ASFYELQLVKPCTLY*AAIKSSLSALPYDA
Trigger: GGCATCATACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGGTTTCACTAGCTGGAGCTCATAGAAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR GCA 90 bp CCTGTACACTCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTaGCGTATGATGCCTAATTGGTTGGTTATTTCTAAAAGCTGGTGG +
Preference number: 1 (lower is better)
Translates to: PVHSIAPPLKAALVH*RMMPNWLVISKSWW
Trigger: CCACCAGCTTTTAGAAATAACCAACCAATTAGGCATCATACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR CAA 90 bp TGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTGGGAAGGAACCTaGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGCACAGG +
Preference number: 2 (lower is better)
Translates to: WPGFAHSLFPDWEGT*LFTCGWEGGARQHR
Trigger: CCTGTGCTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
3UTR-3UTR GCA 90 bp ATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTCAGTGCAGACCAAGTaGAGGCTGCCTGCTAACACC +
Preference number: 2 (lower is better)
Translates to: MGCSPLEQNSRPLGRPGTSVQTK*RLPANT
Trigger: GGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGA...CGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR CAA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATaGGTGTGGTGTAGAAACAGGAGCAGAGGCACCTCTAGGAAAAAC +
Preference number: 2 (lower is better)
Translates to: PSPAGGPHSVMELER*VWCRNRSRGTSRKN
Trigger: GTTTTTCCTAGAGGTGCCTCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR CAA 90 bp TTAGCATCACCTGGTGAGAGGGCGTGGCCAGGCTTTGCCCATTCCTaGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: LASPGERAWPGFAHS*FPDWEGTLLFTCGW
Trigger: CCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAGGTGATGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
3UTR-3UTR GCA 90 bp AAGAATTTAGTGCCTTTCAAGCACAGGTGTAACAAGGGCCGTCCCCCTTGCAGCGCACAGGGCACTGGGTaGTTTTGCTCGGAGACTGGC +
Preference number: 2 (lower is better)
Translates to: KNLVPFKHRCNKGRPPCSAQGTG*FCSETG
Trigger: GCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGC...GCTGCAAGGGGGACGGCCCTTGTTACACCTGTGCTTGAAAGGCACTAAATTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
3UTR-3UTR TCA 90 bp TCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATAGCCTCTTTTGGCACTaGCCTGGGCTTGGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: SCAVRSPQPVVWLWVYFYSLFWH*PGLGFQ
Trigger: TTGAAACCCAAGCCCAGGTCAGTGCCAAAAGAGGCT...ATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR-3UTR GCA 90 bp CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGCAAGGCAGTGGTCAGTaGAGACCAAGTGCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: LPSYLLVCRCLSMGCSPLQGSGQ*RPSAGC
Trigger: GCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTG...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR-3UTR GCA 90 bp GGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTGAGAACATTGCGCAGTaGTCAAGTCAAGAAATAGCT +
Preference number: 2 (lower is better)
Translates to: GMLSLGTEQPSTRKTRDVENIAQ*SSQEIA
Trigger: AGCTATTTCTTGACTTGAGCACTGCGCAATGTTCTC...AACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR-3UTR GCA 90 bp GAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: ESLGIVPMLLGHTREPGKSSLAS*LNKEPG
Trigger: TCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA...CTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR CAA 90 bp TCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTaGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTAAGC +
Preference number: 2 (lower is better)
Translates to: SYLLVCRCLSMGCSP*EQNSRPLGRPGTLS
Trigger: GCTTAACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR-3UTR GCA 90 bp CACTCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCGTATGATGCCTAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: HSIAPPLKAALVHCRMMPNASTG*PRLSCA
Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...AGGCATCATACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR-3UTR CCA 90 bp ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGGCCCACATTCTGTCATaGAACTGGAAAGATTGGTGT +
Preference number: 2 (lower is better)
Translates to: MSVYGMLSLGTEQPSTRKAHILS*NWKDWC
Trigger: ACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR CAA 90 bp GCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGCTaGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGC +
Preference number: 2 (lower is better)
Translates to: ALFLCYLVILESQAS*NNEGAGESSSSLAS
Trigger: GCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR-3UTR GCA 90 bp AATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGAATAAGAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: NNEGAGESSSSLASCLNKNASTG*PRLSCA
Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...CTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152653.8
3UTR-3UTR TCA 90 bp TATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAAGAGCCAGGCAAGCTTaGATAATGAAGGTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: YLESLGIVPMLLGHTREPRARQA*IMKVQV
Trigger: CACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCT...TGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR-3UTR GCA 90 bp CAATGCGCTAGTATTTATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: QCASIYLESLGIVPMLLGSSLAS*LNKEPG
Trigger: TCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA...ACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATAAATACTAGCGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR-3UTR TCA 90 bp TGCGCTAGTATTTATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATAGAGCCAGGCAAGCTTaGATAATGAAGGTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: CASIYLESLGIVPMLLGHRARQA*IMKVQV
Trigger: CACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCT...ATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATAAATACTAGCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR-3UTR CCA 90 bp TCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATCGTATGATGCCTAATTaGTTGGTTATTTCTAAAAGC +
Preference number: 2 (lower is better)
Translates to: SCAVRSPQPVVWLWVYFYRMMPN*LVISKS
Trigger: GCTTTTAGAAATAACCAACCAATTAGGCATCATACG...ATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR GCA 72 bp AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTaGCTGCTAACACCTAGGGCACCCCAGCCCTGCCGG +
Preference number: 3 (lower is better)
Translates to: SQGSGQCRPSAG*LLTPRAPQPCR
Trigger: CCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR GCA 72 bp TCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATaGGTCGTCGGGTCACCTACTCTGGAGAGTGCCGGG +
Preference number: 3 (lower is better)
Translates to: SSLASCLNKEPG*VVGSPTLESAG
Trigger: CCCGGCACTCTCCAGAGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR TCA 72 bp GTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTaGATAAGGAGCCAGGATGCGTCGTCGGGTCACCTA +
Preference number: 3 (lower is better)
Translates to: VQVSRLPRLQAA*IRSQDASSGHL
Trigger: TAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR GCA 72 bp GAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCA +
Preference number: 3 (lower is better)
Translates to: EGAGESSSSLAS*LNKEPGCVVGS
Trigger: TGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR GCA 72 bp TCGCCCTACAGGATACAAGAGGCCATCTCTATCGTGTaGTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: SPYRIQEAISIV*CAVSTACGLAL
Trigger: CAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCTCTTGTATCCTGTAGGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
3UTR CCA 72 bp GGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATaGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGA +
Preference number: 3 (lower is better)
Translates to: GTPALPGAHILS*NWKDWCGVETG
Trigger: TCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR CCA 72 bp CCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTaGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGAG +
Preference number: 3 (lower is better)
Translates to: PALPGAHILSWN*KDWCGVETGAE
Trigger: CTCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR CCA 72 bp GCGTGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTaGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAG +
Preference number: 3 (lower is better)
Translates to: AWPGFAHSLFPD*EGTLLFTCGWE
Trigger: CTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
3UTR GCA 72 bp CTACAGGATACAAGAGGCCATCTCTATCGTGTGCTGTaGGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTAT +
Preference number: 3 (lower is better)
Translates to: LQDTRGHLYRVL*GLHSLWSGSGY
Trigger: ATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCTCTTGTATCCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
3UTR CCA 72 bp TTGGAAGAACCACGAGAGCCTCTTTTGGCACTGACCTaGGCTTGGGTTTCAACGCTTCTACTGGTTGCCCTC +
Preference number: 3 (lower is better)
Translates to: LEEPREPLLALT*AWVSTLLLVAL
Trigger: GAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCCAAAAGAGGCTCTCGTGGTTCTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR-3UTR CAA 90 bp AACCCTGTACACTCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCGTGGCACTGACCTGGGCTaGGGTTTCAACGCTTCTACT +
Preference number: 3 (lower is better)
Translates to: NPVHSIAPPLKAALVHCRGTDLG*GFNAST
Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCC...ACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR TCA 72 bp GCCCTCGAGTTAATGTTAAAAGTTAGCATCACCTGGTaGGAGGGCGTGGCCAGGCTTTGCCCATTCCTTGTT +
Preference number: 3 (lower is better)
Translates to: ALELMLKVSITW*EGVARLCPFLV
Trigger: AACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAGGTGATGCTAACTTTTAACATTAACTCGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
3UTR-3UTR CAA 90 bp GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACAATGATGCCTAATTGGTaGGTTATTTCTAAAAGCTGG +
Preference number: 3 (lower is better)
Translates to: GRSTFLPISHPTKGTGETMMPNW*VISKSW
Trigger: CCAGCTTTTAGAAATAACCAACCAATTAGGCATCAT...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR GCA 72 bp TATGAGCTCCAGCTAGTGAAACCCTGTACACTCTATTaGGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCG +
Preference number: 3 (lower is better)
Translates to: YELQLVKPCTLY*AAIKSSLSALP
Trigger: CGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGGTTTCACTAGCTGGAGCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR CCA 72 bp CATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTaGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTA +
Preference number: 3 (lower is better)
Translates to: HLYRVLCGLHSL*SGSGYISILRL
Trigger: TAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
3UTR-3UTR CAA 90 bp TCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCATGGAACTGGAAAGATaGGTGTGGTGTAGAAACAGG +
Preference number: 3 (lower is better)
Translates to: SYFLLVCTPDAIENIAQCMELER*VWCRNR
Trigger: CCTGTTTCTACACCACACCAATCTTTCCAGTTCCAT...GCACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR TCA 72 bp TATTTTGAGGCTATTTGCTCAACTGGCATCTTTCTATaGGCTCCAGCTAGTGAAACCCTGTACACTCTATTG +
Preference number: 3 (lower is better)
Translates to: YFEAICSTGIFL*APASETLYTLL
Trigger: CAATAGAGTGTACAGGGTTTCACTAGCTGGAGCTCATAGAAAGATGCCAGTTGAGCAAATAGCCTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
3UTR GCA 72 bp TCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTaGCGTATGATGCCTAATTGGTTGGTTATTTCTAAA +
Preference number: 3 (lower is better)
Translates to: SIAPPLKAALVH*RMMPNWLVISK
Trigger: TTTAGAAATAACCAACCAATTAGGCATCATACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
CDS-3UTR TCA 90 bp GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTGGCAGTGGCCAGGACTaGGCCGGCATCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GCLLTPRAPQPCRGPTFCGSGQD*AGIPEK
Trigger: CTTCTCAGGGATGCCGGCTCAGTCCTGGCCACTGCC...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCCCAATTGGTGGCAGTaGCCAGGACTGAGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: GCLLTPRAPQPCRGPTFCPNWWQ*PGLSRH
Trigger: ATGCCGGCTCAGTCCTGGCCACTGCCACCAATTGGG...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTGGCCATGAAGAGGACTaGGTGCAGCTTGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GCLLTPRAPQPCRGPTFCGHEED*VQLGAV
Trigger: CACAGCACCAAGCTGCACGCAGTCCTCTTCATGGCC...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp TGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATTTCTCCAGAAGCCGCTaGCACACCACCTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CLLTPRAPQPCRGPTFCHFSRSR*HTTSQL
Trigger: CAGCTGGGAGGTGGTGTGTCAGCGGCTTCTGGAGAA...ATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp TGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATTCTCGAAGAGCGCGTTaGGATCGCGCAGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: CLLTPRAPQPCRGPTFCHSRRAR*DRADPA
Trigger: GGCTGGATCTGCGCGATCCCAACGCGCTCTTCGAGA...ATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGATCTCGGCTCGGACCTaGCGCTCCAGCCCGCGGATC +
Preference number: 4 (lower is better)
Translates to: SQGSGQCRPSAGCLLTPRISART*RSSPRI
Trigger: GATCCGCGGGCTGGAGCGCCAGGTCCGAGCCGAGAT...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGCGCATCTGGCCGATaGTGTCCGCCGCCTCGATCA +
Preference number: 4 (lower is better)
Translates to: RAPQPCRGPTFCHGTGKIGASGR*CPPPRS
Trigger: TGATCGAGGCGGCGGACACCATCGGCCAGATGCGCC...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp CTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAAAGTCTGTGAGGGCTTaGCGCGGAGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLTPRAPQPCRGPTFCHGKSVRA*RGELSS
Trigger: GGAGGAGAGCTCTCCGCGCCAAGCCCTCACAGACTT...TCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCAGCTGCAGCAGGCTATaGAGGTGGCAGCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: APCGAHSQGSGQCRPSAGSCSRL*RWQQSR
Trigger: CCTGCTCTGCTGCCACCTGCATAGCCTGCTGCAGCT...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTTCGATGTGGAGTTGTTaGTCTCCAGCTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GCLLTPRAPQPCRGPTFCSMWSC*SPAPAE
Trigger: CTCTGCAGGAGCTGGAGACCAACAACTCCACATCGA...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCCCCATATGGCGTCTCTaGTGCCTGCCAGACCCTTCA +
Preference number: 4 (lower is better)
Translates to: APCGAHSQGSGQCRPSAGPIWRL*CLPDPS
Trigger: TGAAGGGTCTGGCAGGCATCAGAGACGCCATATGGG...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTGTAGAAAAGGGCATGTaGCTGGTTCAGAGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GCLLTPRAPQPCRGPTFCVEKGM*LVQSGS
Trigger: GCTACCACTCTGAACCAGGCACATGCCCTTTTCTAC...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTTTGACCGGAAGTGGCTaGCTGCTGCCACCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: GMLSLGTEQPSTRKTRDVLTGSG*LLPPGG
Trigger: TCCGCCAGGTGGCAGCAGCCAGCCACTTCCGGTCAA...AACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCATAGTTGACCGGAAGTaGCTGGCTGCTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: APCGAHSQGSGQCRPSAGIVDRK*LAAATW
Trigger: CCAGGTGGCAGCAGCCAGCCACTTCCGGTCAACTAT...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GGAGGGCGGGGCCAGACAGCACAGGGCACTGGGTGCTTTTGCTCGGAGACTGGCAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GGRGQTAQGTGCFCSETGSGSML*GSWELK
Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...GCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGCTGTCTGGCCCCGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR TCA 90 bp GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCACACACTGCTTTAGGTaGGGGCACAGCTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: APCGAHSQGSGQCRPSAGTHCFR*GHSSPR
Trigger: TCTGGGAGAGCTGTGCCCTCACCTAAAGCAGTGTGT...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: GHLYRVLCGLHSLWSGSGFWSLP*SGHSSP
Trigger: AGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAA...CCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR GCA 90 bp GGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: GHLYRVLCGLHSLWSGSGLHSGV*LAPATL
Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...CCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR GCA 90 bp GAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGCACAGGCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: EGTLLFTCGWEGGARQHRLHSGV*LAPATL
Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...CCTGTGCTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR TCA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGAGGTGGGCAGGTGTCTaGACCAGCTGCATAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PSPAGGPHSVMELERLVWRWAGV*TSCIAS
Trigger: TGAAGCTATGCAGCTGGTTCAGACACCTGCCCACCT...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTCCCTTTCCAGTGGGATaGTGCCTTGTGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RAPQPCRGPTFCHGTGKIPFPVG*CLVTVS
Trigger: GGAGACAGTCACAAGGCAGCATCCCACTGGAAAGGG...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGGGCGTCTCTGATGCCTaGCAGACCCTTCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: PSPAGGPHSVMELERLVWGVSDA*QTLHAL
Trigger: AAGAGCATGAAGGGTCTGGCAGGCATCAGAGACGCC...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTTTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: RAPQPCRGPTFCHGTGKIFWSLP*SGHSSP
Trigger: AGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAA...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: PSPAGGPHSVMELERLVWLHSGV*LAPATL
Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCGTTCGGAGTGTGGGCTaGAACTCGATAATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: APCGAHSQGSGQCRPSAGVRSVG*NSIMEV
Trigger: CACCTCCATTATCGAGTTCCAGCCCACACTCCGAAC...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGGCAGAGTTCTTAGGCTaGTGCGTGGGGGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: SQGSGQCRPSAGCLLTPRAEFLG*CVGVVS
Trigger: GGATACCACCCCCACGCACCAGCCTAAGAACTCTGC...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGTTCATCCCAATTGGTaGCAGTGGCCAGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: RAPQPCRGPTFCHGTGKIVHPNW*QWPGLS
Trigger: GCTCAGTCCTGGCCACTGCCACCAATTGGGATGAAC...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp TCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGTCATCTTCTCCATTCTaGAGTCTGCCTTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SRLGRNLAFHLWLGGRGQSSSPF*SLPCSG
Trigger: GCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGA...CTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR GCA 90 bp AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTTTTCCAGTGGGATGCTaGCTTGTGACTGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RAPQPCRGPTFCHGTGKIFPVGC*LVTVSR
Trigger: CCTGGAGACAGTCACAAGGCAGCATCCCACTGGAAA...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTTGGTCTCCAGCTCCTaGAGAGCTGAGACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: PSPAGGPHSVMELERLVWLVSSS*RAETRS
Trigger: GCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAA...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp ATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGGAGTTCTTAGGCTGGTaGGTGGGGGTGGTATCCTTG +
Preference number: 4 (lower is better)
Translates to: MGCSPLEQNSRPLGRPGTEFLGW*VGVVSL
Trigger: CAAGGATACCACCCCCACGCACCAGCCTAAGAACTC...CGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCTGGGTCATTGGAAATaGCCCTTCTTTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: GCLLTPRAPQPCRGPTFCLGHWK*PFFLYL
Trigger: CAGATAAAGAAAGAAGGGGCATTTCCAATGACCCAG...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACATTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: GRSTFLPISHPTKGTGETFWSLP*SGHSSP
Trigger: AGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAA...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR GCA 90 bp CTGGTGAGAGGGCGTGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTGGGAAGTTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LVRGRGQALPIPCFQTGKFWSLP*SGHSSP
Trigger: AGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAA...CTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR GCA 90 bp TCGTCTTCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: SSSSLASCLNKEPGCVVGLHSGV*LAPATL
Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...CCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152653.8
CDS-3UTR CCA 90 bp TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTGCGCAGCGGCGCATCTaGCCGATGGTGTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: YRKLDSVALKLTAVLPLSAQRRI*PMVSAA
Trigger: GGCGGCGGACACCATCGGCCAGATGCGCCGCTGCGC...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGCTGGCTGCTGCCACCTaGCGGATGAGGATTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SQGSGQCRPSAGCLLTPRLAAAT*RMRIGN
Trigger: ATTTCCAATCCTCATCCGCCAGGTGGCAGCAGCCAG...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGGTCCGACACAGCCTaGCATTTGAGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PSPAGGPHSVMELERLVWWSDTA*HLSSIL
Trigger: CAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCA...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGCACAGGATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EGTLLFTCGWEGGARQHRMLWGS*ELKVLL
Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...CCTGTGCTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR TCA 90 bp GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAAGGCGGGCGCAGTATTaGTCGGTGGCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: AHILSWNWKDWCGVETGARRAQY*SVACTA
Trigger: CGCCGTGCAGGCCACCGATCAATACTGCGCCCGCCT...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACGGCAGAGTCTGGCCATaGAGAGGACTGCGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AGGPHSVMELERLVWCRNGRVWP*RGLRAA
Trigger: AGCTGCACGCAGTCCTCTTCATGGCCAGACTCTGCC...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp TTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCATCTCCTGTAGGGTaGCCTTTGGCAAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LFPDWEGTLLFTCGWEGGASPVG*PLAKHG
Trigger: GCCATGCTTTGCCAAAGGTCACCCTACAGGAGATGC...CCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR GCA 90 bp TGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATATGTCGATCCATTTCTaGAGCGTGTCTTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: CLLTPRAPQPCRGPTFCHMSIHF*SVSFRY
Trigger: GTACCTGAAAGACACGCTGCAGAAATGGATCGACAT...ATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGACTTCCTTCACTCCCTaGCACTGGGCCTGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPSYLLVCRCLSMGCSPLTSFTP*HWACAG
Trigger: CCCCGCGCAGGCCCAGTGGCAGGGAGTGAAGGAAGT...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: VSRLGRNLAFHLWLGGRGRLLLR*GVKTSR
Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...GCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR GCA 90 bp GGGGCCAGACAGCACAGGGCACTGGGTGCTTTTGCTCGGAGACTGGCGATGCAGTTCTTGTGCTTGTCATaGTCAGTGGAAGGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: GARQHRALGAFARRLAMQFLCLS*SVEGVQ
Trigger: TTGGACTCCTTCCACTGAGCATGACAAGCACAAGAA...CTGCATCGCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGCTGTCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR GCA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGCCCTCGCCTTTCTTGTaGTTGTCATGCTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PSPAGGPHSVMELERLVWPSPFL*LSCSVE
Trigger: TTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGG...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PSPAGGPHSVMELERLVWNASTG*PRLSCA
Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GCTGGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AGRSTFLPISHPTKGTGENASTG*PRLSCA
Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...CTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp GCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AISIVCCAVSTACGLALGMLWGS*ELKVLL
Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...ACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp GTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCCCCATTTCCTCTTGTaGAACTGGGCTTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VSRLGRNLAFHLWLGGRGPHFLL*NWAWVS
Trigger: TGAAACCCAAGCCCAGTTCCACAAGAGGAAATGGGG...GCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
3UTR CAA 72 bp TTTGCCCATTCCTTGTTTCCAGACTGGGAAGGAACCTaGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FAHSLFPDWEGT*LFTCGWEGGAR
Trigger: TCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
3UTR CAA 72 bp CCTGGTGAGAGGGCGTGGCCAGGCTTTGCCCATTCCTaGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACC +
Preference number: 4 (lower is better)
Translates to: PGERAWPGFAHS*FPDWEGTLLFT
Trigger: GGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR TCA 90 bp AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGTGCAGCTTGGTGCTGTaGAGGACATCCTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SQGSGQCRPSAGCLLTPRCSLVL*RTSFCS
Trigger: GGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCA...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp CTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: LYRVLCGLHSLWSGSGYILREAN*FSVPVT
Trigger: GGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAG...AATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR GCA 90 bp GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACCTGGCTGATGGGATGTaGGAGAGTTCGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGGPHSVMELERLVWCRNLADGM*ESSECG
Trigger: CCCACACTCCGAACTCTCGCACATCCCATCAGCCAG...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp TCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: SLSCAVRSPQPVVWLWVYLHSGV*LAPATL
Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...ATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR GCA 90 bp CCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTAAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: PSLSCAVRSPQPVVWLWVRLLLR*GVKTSR
Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...TACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR GCA 90 bp CTGGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACCCTCGCCTTTCTTGTaGTTGTCATGCTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LAEARFSPSPTQLKAQGRPSPFL*LSCSVE
Trigger: TTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGG...TCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR GCA 90 bp CTGGTGAGAGGGCGTGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTGGGAAGAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LVRGRGQALPIPCFQTGKNASTG*PRLSCA
Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...CTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR GCA 90 bp CTGGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACCCTGTACACTCTATTaGGCCGCCATTAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LAEARFSPSPTQLKAQGRPCTLY*AAIKSS
Trigger: GCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGG...TCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp CTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAATTCAAAGCCTTCTCTaGTCAGTGTCTGTAACCGAT +
Preference number: 4 (lower is better)
Translates to: LLTPRAPQPCRGPTFCHGIQSLL*SVSVTD
Trigger: ATCGGTTACAGACACTGACCAGAGAAGGCTTTGAAT...TCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACAATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRSTFLPISHPTKGTGETMLWGS*ELKVLL
Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp TCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSLASCLNKEPGCVVGSPMLWGS*ELKVLL
Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...AGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR CCA 90 bp CCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTAAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PSLSCAVRSPQPVVWLWVSGSML*GSWELK
Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...TACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp AGGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGAT +
Preference number: 4 (lower is better)
Translates to: RPSLSCAVRSPQPVVWLWACHAQ*KESKPD
Trigger: ATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGC...CCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR TCA 90 bp GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACGCATCTCCTGTAGGGTaGCCTTTGGCAAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: AGGPHSVMELERLVWCRNASPVG*PLAKHG
Trigger: GCCATGCTTTGCCAAAGGTCACCCTACAGGAGATGC...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp TCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATAGCCTCTTTTGGCACTaGCCTGGGCTTGGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: SLSCAVRSPQPVVWLWVYSLFWH*PGLGFQ
Trigger: TTGAAACCCAAGCCCAGGTCAGTGCCAAAAGAGGCT...ATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR GCA 90 bp ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGTTAGAGGAGTCCAGCTaGAGCAGGCTATGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: MSVYGMLSLGTEQPSTRKLEESS*SRLCRW
Trigger: CCACCTGCATAGCCTGCTGCAGCTGGACTCCTCTAA...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAAAGAAAGACATGTTCTaGTCAAAGTGGACATGCTTG +
Preference number: 4 (lower is better)
Translates to: LLTPRAPQPCRGPTFCHGKKDMF*SKWTCL
Trigger: CAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTT...TCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp TTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGCCCTCGCCTTTCTTGTaGTTGTCATGCTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LFPDWEGTLLFTCGWEGGPSPFL*LSCSVE
Trigger: TTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGG...CCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR GCA 90 bp AGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACTCTGGAGAGTAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGCVVGSPTLESNASTG*PRLSCA
Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...ACTCTCCAGAGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS-3UTR CCA 90 bp AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGCATGCTTGTTCGATGTaGAGTTGTTGGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQGSGQCRPSAGCLLTPRHACSM*SCWSPA
Trigger: AGCTGGAGACCAACAACTCCACATCGAACAAGCATG...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGCACGGGCTAATGGCTTaGGCTTTCATGGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: MSVYGMLSLGTEQPSTRKHGLMA*AFMERP
Trigger: TGGCCTCTCCATGAAAGCCCAAGCCATTAGCCCGTG...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGCTCTCCCAGAGACTaGCAGAGTCTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: AGGPHSVMELERLVWCRNSSPRD*QSLAMK
Trigger: CTTCATGGCCAGACTCTGCCAGTCTCTGGGAGAGCT...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp AGGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGTCGGTTCTGGGTCATTaGAAATGCCCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RPSLSCAVRSPQPVVWLWSVLGH*KCPFFL
Trigger: AAGAAAGAAGGGGCATTTCCAATGACCCAGAACCGA...CCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp ATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATCATCTTCTCCATTCTaGAGTCTGCCTTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: ISIVCCAVSTACGLALGISSSPF*SLPCSG
Trigger: GCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGA...TATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp TCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACTAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SLASCLNKEPGCVVGSPTSGSML*GSWELK
Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...AGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR CCA 90 bp GCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGAGTCAGGGAGGGGTTaGAAGAACCACGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: AVRSPQPVVWLWVYFYFEESGRG*KNHESL
Trigger: GAGGCTCTCGTGGTTCTTCCAACCCCTCCCTGACTC...CTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR TCA 90 bp CATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGCTCATAGGCAGCTATaGCTTGGGCCATGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: HSLFPDWEGTLLFTCGWEAHRQL*LGPCRS
Trigger: AGACCTGCATGGCCCAAGTCATAGCTGCCTATGAGC...CTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR TCA 90 bp AGCTTGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: SLNNEGAGESSSSLASCLLREAN*FSVPVT
Trigger: GGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAG...CAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS-3UTR TCA 90 bp AAGAATTTAGTGCCTTTCAAGCACAGGTGTAACAAGGGCCGTCCCCCTTGCAGCCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: KNLVPFKHRCNKGRPPCSLREAN*FSVPVT
Trigger: GGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAG...GCTGCAAGGGGGACGGCCCTTGTTACACCTGTGCTTGAAAGGCACTAAATTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR GCA 90 bp ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: MSVYGMLSLGTEQPSTRKSSLAS*LNKEPG
Trigger: TCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGCTGCGAGGCTTCCATaGCGCTCCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: AHILSWNWKDWCGVETGAAARLP*RSRSSP
Trigger: CGGAGAAGATCTGGAGCGCCATGGAAGCCTCGCAGC...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGAGTGCACAGCTCTGCCTaGATGCAGCCCACGACGGAC +
Preference number: 4 (lower is better)
Translates to: PHSVMELERLVWCRNRSRVHSSA*MQPTTD
Trigger: GTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCAC...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGTCGGTTCTGGGTCATTaGAAATGCCCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SQGSGQCRPSAGCLLTPRSVLGH*KCPFFL
Trigger: AAGAAAGAAGGGGCATTTCCAATGACCCAGAACCGA...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACATCGGTTCTGGGTCATTaGAAATGCCCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GRSTFLPISHPTKGTGETSVLGH*KCPFFL
Trigger: AAGAAAGAAGGGGCATTTCCAATGACCCAGAACCGA...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp TCTTCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCAGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGAT +
Preference number: 4 (lower is better)
Translates to: SSSLASCLNKEPGCVVGSACHAQ*KESKPD
Trigger: ATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGC...TGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS-3UTR CCA 90 bp TTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGAT +
Preference number: 4 (lower is better)
Translates to: LFPDWEGTLLFTCGWEGGACHAQ*KESKPD
Trigger: ATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGC...CCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR TCA 90 bp ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCCAGCAGGAAGTCTGTaGGGGCTTGGCGCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ILFSSSLYPRRYREHCAVPAGSL*GLGAES
Trigger: GCTCTCCGCGCCAAGCCCTCACAGACTTCCTGCTGG...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp ATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGAGCATCTTGCTTTCGTaGAAAATAGTTGACCGGAAG +
Preference number: 4 (lower is better)
Translates to: MGCSPLEQNSRPLGRPGTSILLS*KIVDRK
Trigger: CTTCCGGTCAACTATTTTGCACGAAAGCAAGATGCT...CGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACCTGCGTGCAGCTTGGTaGTGTGAAGGACATCCTTTT +
Preference number: 4 (lower is better)
Translates to: AGGPHSVMELERLVWCRNLRAAW*CEGHPF
Trigger: AAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAG...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTCTGGGTCATTGGAAATaGCCCTTCTTTCTTTATCNN +
Preference number: 4 (lower is better)
Translates to: AISIVCCAVSTACGLALGLGHWK*PFFLYX
Trigger: NNGATAAAGAAAGAAGGGGCATTTCCAATGACCCAG...ACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
CDS-3UTR GCA 90 bp CATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGGGCTTTGCAACACTaGCCCATTTCCTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HSLFPDWEGTLLFTCGWEGALQH*PISSCG
Trigger: TCCACAAGAGGAAATGGGGCAGTGTTGCAAAGCCCC...CTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CCA 90 bp TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTCAGAAGGCAGGTCGTTaGGGCTCTCGGACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: YRKLDSVALKLTAVLPLSQKAGR*GSRTRG
Trigger: TCCTCTGGTCCGAGAGCCCCAACGACCTGCCTTCTG...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGCCTTCTTTCTTTATCTaGTTTTCCTCTGTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: PSPAGGPHSVMELERLVWPSFFI*FSSVSC
Trigger: GCAACTCACAGAGGAAAACCAGATAAAGAAAGAAGG...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: MSVYGMLSLGTEQPSTRKSGSML*GSWELK
Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACGAAGTGGCTGGCTGCTaGCACCTGGCGGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: YLLVCRCLSMGCSPLEQNEVAGC*HLADED
Trigger: ATCCTCATCCGCCAGGTGGCAGCAGCCAGCCACTTC...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGAAATGGTGCACAGCTCTaGCTGGATGCAGCCCACGAC +
Preference number: 4 (lower is better)
Translates to: PHSVMELERLVWCRNRSRNGAQL*LDAAHD
Trigger: GTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATT...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGCTGGGTCATTGGAAATaGCCCTTCTTTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: LVSRLGRNLAFHLWLGGRLGHWK*PFFLYL
Trigger: CAGATAAAGAAAGAAGGGGCATTTCCAATGACCCAG...CCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CCA 90 bp GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCACCTCCAAGAGCATTATaGAGCAGAGGGCTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: AHILSWNWKDWCGVETGAPPRAL*SRGLRP
Trigger: TGGCCGAAGCCCTCTGCTCCATAATGCTCTTGGAGG...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGGAGCCCTCGCCTCCCTaGCAGGTTTCTCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: ILFSSSLYPRRYREHCAVEPSPP*QVSQNP
Trigger: GGGGTTCTGAGAAACCTGCCAGGGAGGCGAGGGCTC...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp TTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGACCCGATTAACTTCCTaGCATAAGCTAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LFPDWEGTLLFTCGWEGGTRLTS*HKLNRK
Trigger: CTTCCTGTTTAGCTTATGCCAGGAAGTTAATCGGGT...CCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CCA 90 bp TTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCTCATCTTCTCCATTCTaGAGTCTGCCTTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LESLGIVPMLLGHTREPGSSSPF*SLPCSG
Trigger: GCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGA...GCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152653.8
CDS-3UTR CCA 90 bp GAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ESLGIVPMLLGHTREPGKMLWGS*ELKVLL
Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...CTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR CCA 90 bp AGCTTGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SLNNEGAGESSSSLASCLSGSML*GSWELK
Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...CAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
3UTR CAA 72 bp TTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTaGGAACAGAACAGCCGTCCACTCGGAAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: LVCRCLSMGCSP*EQNSRPLGRPG
Trigger: CCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCAGCAGATCCAGCCGCTTaGGCGCGGAGGAGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: GTLSTFPSCGLYFTFEFPADPAA*ARRRRS
Trigger: CGACCGCCTCCTCCGCGCTCAAGCGGCTGGATCTGC...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACATCTCCTCCGCTCCATaGGTCTCGAAGAGCGCGTTG +
Preference number: 4 (lower is better)
Translates to: YLLVCRCLSMGCSPLEQNISSAP*VSKSAL
Trigger: CAACGCGCTCTTCGAGACTCATGGAGCGGAGGAGAT...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp TCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCAAACTGAGCCCGGTTTaGTACGCTGACCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SYFLLVCTPDAIENIAQCKLSPV*YADPGS
Trigger: GCTGCCTGGGTCAGCGTAGCAAACCGGGCTCAGTTT...GCACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp TCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATCTGGGTCATTGGAAATaGCCCTTCTTTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: SLSCAVRSPQPVVWLWVYLGHWK*PFFLYL
Trigger: CAGATAAAGAAAGAAGGGGCATTTCCAATGACCCAG...ATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR GCA 90 bp TTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: LESLGIVPMLLGHTREPGRLLLR*GVKTSR
Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...GCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR CCA 90 bp ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCGCAGTATTGATCGGTaGCCTGCACGGCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ILFSSSLYPRRYREHCAVRSIDR*PARRPP
Trigger: TGGTGGACGCCGTGCAGGCCACCGATCAATACTGCG...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPSYLLVCRCLSMGCSPLMLWGS*ELKVLL
Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp CCATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGATTGTGGAACTGGGCTTaGGTTTCAACGCTTCTACTG +
Preference number: 4 (lower is better)
Translates to: PFLVSRLGRNLAFHLWLGLWNWA*VSTLLL
Trigger: CAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAA...TCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR TCA 90 bp CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGTCTGGTTTTCCTCTGTaGGTTGCTCATAGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: LPSYLLVCRCLSMGCSPLSGFPL*VAHRQL
Trigger: TAGCTGCCTATGAGCAACTCACAGAGGAAAACCAGA...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp GAAAAGAATTTAGTGCCTTTCAAGCACAGGTGTAACAAGGGCCGTCCCCCTTGCTCTGGTTTTCCTCTGTaGGTTGCTCATAGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: EKNLVPFKHRCNKGRPPCSGFPL*VAHRQL
Trigger: TAGCTGCCTATGAGCAACTCACAGAGGAAAACCAGA...GCAAGGGGGACGGCCCTTGTTACACCTGTGCTTGAAAGGCACTAAATTCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR TCA 90 bp TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: YLLVCRCLSMGCSPLEQNLREAN*FSVPVT
Trigger: GGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAG...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTCACGGTCCCAGCATCTaGGTATCGATCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: YRKLDSVALKLTAVLPLSHGPSI*VSIKGR
Trigger: TCTGCCTTTGATCGATACGCAGATGCTGGGACCGTG...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTATTAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: RSPQPVVWLWVYFYFEAIRLLLR*GVKTSR
Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...AATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp TTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCTTCGGCCACAGCCTaGTCCGACACAGCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FHILFSSSLYPRRYREHCASATA*SDTAWH
Trigger: ATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGC...GCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCATCTTTCAGGTACTCCTaGCTGATGGGATGTGCGAGA +
Preference number: 4 (lower is better)
Translates to: AHILSWNWKDWCGVETGASFRYS*LMGCAR
Trigger: TCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGA...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGCAGAACAGAAGTTCTaGACACACGGGCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: AHILSWNWKDWCGVETGAAEQKF*THGLMA
Trigger: AGCCATTAGCCCGTGTGTCCAGAACTTCTGTTCTGC...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp ATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGTCGGTTCTGGGTCATTaGAAATGCCCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: IPCFQTGKEPCFSPVAGRSVLGH*KCPFFL
Trigger: AAGAAAGAAGGGGCATTTCCAATGACCCAGAACCGA...CCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CCA 90 bp CGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTATTAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: RSPQPVVWLWVYFYFEAISGSML*GSWELK
Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...AATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
3UTR CAA 72 bp CTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGCTaGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: LCYLVILESQAS*NNEGAGESSSS
Trigger: CGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR GCA 90 bp TTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCTTCTTGTGCTTGTCATaGTCAGTGGAAGGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LESLGIVPMLLGHTREPGFLCLS*SVEGVQ
Trigger: TTGGACTCCTTCCACTGAGCATGACAAGCACAAGAA...GCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS-3UTR CCA 90 bp TCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCAAAAGGGCATGTGCCTaGTTCAGAGTGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SYFLLVCTPDAIENIAQCKRACA*FRVVAS
Trigger: GCTGGCTACCACTCTGAACCAGGCACATGCCCTTTT...GCACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGGCAATGGTGTGTCACTaGAGGGAAGGTAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILFSSSLYPRRYREHCAVAMVCH*REGRPG
Trigger: TCCTGGCCTACCTTCCCTCCAGTGACACACCATTGC...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTGGTATCCTTGAGCAATaGTGTGTCACTGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: YRKLDSVALKLTAVLPLSGILEQ*CVTGGK
Trigger: CTTCCCTCCAGTGACACACCATTGCTCAAGGATACC...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACTCATCTTCTCCATTCTaGAGTCTGCCTTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: YLLVCRCLSMGCSPLEQNSSSPF*SLPCSG
Trigger: GCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGA...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGAT +
Preference number: 4 (lower is better)
Translates to: AHILSWNWKDWCGVETGAACHAQ*KESKPD
Trigger: ATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGC...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp GGAGAATATCACTTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATCCACTACTGGCAAACTaGGCCCGGTTTGCTACGCTG +
Preference number: 4 (lower is better)
Translates to: GEYHFHILFSSSLYPRRYPLLAN*ARFATL
Trigger: CAGCGTAGCAAACCGGGCTCAGTTTGCCAGTAGTGG...ATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAAGTGATATTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp TCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCAGAGCCAGGCAAGCTTaGATAATGAAGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SYFLLVCTPDAIENIAQCRARQA*IMKVQV
Trigger: CACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCT...GCACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp CGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTATTTTCTTGTGCTTGTCATaGTCAGTGGAAGGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RSPQPVVWLWVYFYFEAIFLCLS*SVEGVQ
Trigger: TTGGACTCCTTCCACTGAGCATGACAAGCACAAGAA...AATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR CCA 90 bp CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGATGGAGCTGTTGGAGATaGATTCAAAGCCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PHSVMELERLVWCRNRSRWSCWR*IQSLLW
Trigger: CCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCA...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp CTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTCGTATGATGCCTAATTaGTTGGTTATTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LYRVLCGLHSLWSGSGYIRMMPN*LVISKS
Trigger: GCTTTTAGAAATAACCAACCAATTAGGCATCATACG...AATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR TCA 90 bp GGAGAATATCACTTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATACATACCAGGAGGGCTaGGTAGGGAGGCGGATCTTA +
Preference number: 4 (lower is better)
Translates to: GEYHFHILFSSSLYPRRYTYQEG*VGRRIL
Trigger: TAAGATCCGCCTCCCTACTCAGCCCTCCTGGTATGT...ATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAAGTGATATTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGCTTGAATAATAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: ALFLCYLVILESQASLNNRLLLR*GVKTSR
Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...ATTATTCAAGCTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR GCA 90 bp CAATGCGCTAGTATTTATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCCCTCGCCTTTCTTGTaGTTGTCATGCTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QCASIYLESLGIVPMLLGPSPFL*LSCSVE
Trigger: TTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGG...ACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATAAATACTAGCGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS-3UTR CCA 90 bp GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAATGTTCTGCTCAAAGTaGACATGCTTGTTCGATGTG +
Preference number: 4 (lower is better)
Translates to: AHILSWNWKDWCGVETGAMFCSK*TCLFDV
Trigger: CACATCGAACAAGCATGTCCACTTTGAGCAGAACAT...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp TTGCCCATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTCCTTCTTTCTTTATCTaGTTTTCCTCTGTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LPIPCFQTGKEPCFSPVAPSFFI*FSSVSC
Trigger: GCAACTCACAGAGGAAAACCAGATAAAGAAAGAAGG...AGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CCA 90 bp TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTAGACTAGAAGCTCTTTaGAGCTGTTGGAGATGGATT +
Preference number: 4 (lower is better)
Translates to: YRKLDSVALKLTAVLPLSRLEAL*SCWRWI
Trigger: AATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCT...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
3UTR CAA 72 bp CACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTaGAGGCTATTTGCTCAACTGGCATCTTTCTATGAG +
Preference number: 4 (lower is better)
Translates to: HSLWSGSGYISI*RLFAQLASFYE
Trigger: CTCATAGAAAGATGCCAGTTGAGCAAATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR TCA 90 bp GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCAGCTCATAGGCAGCTATaGCTTGGGCCATGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GTLSTFPSCGLYFTFEFPAHRQL*LGPCRS
Trigger: AGACCTGCATGGCCCAAGTCATAGCTGCCTATGAGC...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp TTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: FHILFSSSLYPRRYREHCRLLLR*GVKTSR
Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...GCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR TCA 90 bp GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCAACACAGCCTGGCATTTaGGCAGCATCTTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: GTLSTFPSCGLYFTFEFPTQPGI*AASCFR
Trigger: ACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGT...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp CATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAACCCGATTAACTTCCTaGCATAAGCTAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: HILFSSSLYPRRYREHCATRLTS*HKLNRK
Trigger: CTTCCTGTTTAGCTTATGCCAGGAAGTTAATCGGGT...TGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR GCA 90 bp GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCATTCTTGTGCTTGTCATaGTCAGTGGAAGGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: GTLSTFPSCGLYFTFEFPFLCLS*SVEGVQ
Trigger: TTGGACTCCTTCCACTGAGCATGACAAGCACAAGAA...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CCA 90 bp GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCAGCTCTTTGGAGCTGTTaGAGATGGATTCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GTLSTFPSCGLYFTFEFPALWSC*RWIQSL
Trigger: AAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGC...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp GCACGGCGTCCACCAGGCCCTCGGCGCAGCGGCGCATCTGGCCGATaGTGTCCGCCGCCTCGATCAGGTCGCGGTACCGCTCGCCCACCA +
Preference number: 5 (lower is better)
Translates to: ARRPPGPRRSGASGR*CPPPRSGRGTARPP
Trigger: TGGTGGGCGAGCGGTACCGCGACCTGATCGAGGCGGCGGACACCATCGGCCAGATGCGCCGCTGCGCCGAGGGCCTGGTGGACGCCGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
CDS TCA 90 bp TCGGCTCGGACCTGGCGCTCCAGCCCGCGGATCTCCTCCGCTCCATaGGTCTCGAAGAGCGCGTTGGGATCGCGCAGATCCAGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: SARTWRSSPRISSAP*VSKSALGSRRSSRL
Trigger: CAAGCGGCTGGATCTGCGCGATCCCAACGCGCTCTTCGAGACTCATGGAGCGGAGGAGATCCGCGGGCTGGAGCGCCAGGTCCGAGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
CDS GCA 90 bp GTGTCCGCCGCCTCGATCAGGTCGCGGTACCGCTCGCCCACCATCTaGCGCAGCTCCTCCTTCTTGTGTTCGATCTCGGCTCGGACCTGG +
Preference number: 5 (lower is better)
Translates to: VSAASIRSRYRSPTI*RSSSFLCSISARTW
Trigger: CCAGGTCCGAGCCGAGATCGAACACAAGAAGGAGGAGCTGCGGCAGATGGTGGGCGAGCGGTACCGCGACCTGATCGAGGCGGCGGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
CDS-3UTR CAA 90 bp GGAGGGCGGGGCCAGACAGCACAGGGCACTGGGTGCTTTTGCTCGGAGACTGGCATTCTGGAGTCTGCCTaGCTCCGGCCACTCTTCACC +
Preference number: 5 (lower is better)
Translates to: GGRGQTAQGTGCFCSETGILESA*LRPLFT
Trigger: GGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAAT...GCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGCTGTCTGGCCCCGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CAA 90 bp GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCGAAGTCTGTGAGGGCTaGGCGCGGAGAGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: APCGAHSQGSGQCRPSAGEVCEG*ARRALL
Trigger: GAGGAGAGCTCTCCGCGCCAAGCCCTCACAGACTTC...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS TCA 90 bp CTTCAATGGTGCACAGCTCTGCCTGGATGCAGCCCACGACGGACTTaGTGCAGGCCACGGACTGCGTACGCAGCATGTCCTGCACGGTCC +
Preference number: 5 (lower is better)
Translates to: LQWCTALPGCSPRRT*CRPRTAYAACPARS
Trigger: GGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp TCTGCCTGGATGCAGCCCACGACGGACTTGATGCAGGCCACGGACTaGGTACGCAGCATGTCCTGCACGGTCCCAGCATCTGCGTATCGA +
Preference number: 5 (lower is better)
Translates to: SAWMQPTTDLMQATD*VRSMSCTVPASAYR
Trigger: TCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp GCTGCAGCAGGCTATGCAGGTGGCAGCAGAGCAGGTAGAGCTGTGTaGCCTGGAGGTGCTGCGAGGCTTCCATGGCGCTCCAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: AAAGYAGGSRAGRAV*PGGAARLPWRSRSS
Trigger: AGAAGATCTGGAGCGCCATGGAAGCCTCGCAGCACCTCCAGGCCACACAGCTCTACCTGCTCTGCTGCCACCTGCATAGCCTGCTGCAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp GGCCACGGACTGCGTACGCAGCATGTCCTGCACGGTCCCAGCATCTaGGTATCGATCAAAGGCAGAGTTCTTAGGCTGGTGCGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GHGLRTQHVLHGPSI*VSIKGRVLRLVRGG
Trigger: ACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp GGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTTCAGAAGGCAGGTCGTaGGGGCTCTCGGACCAGAGG +
Preference number: 5 (lower is better)
Translates to: GMLSLGTEQPSTRKTRDVSEGRS*GLSDQR
Trigger: CCTCTGGTCCGAGAGCCCCAACGACCTGCCTTCTGA...AACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp GGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG +
Preference number: 5 (lower is better)
Translates to: GHLYRVLCGLHSLWSGSGTRRLR*LLRCGV
Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...CCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACATGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: GRSTFLPISHPTKGTGETWGSWE*KVLLRE
Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS TCA 90 bp TGCATCAGGTCCTCCCAGAACAAGAGCGGCTTCTCCAGAAGCCGCTaGCACACCACCTCCCAGCTGTGGCTGGCAGACTCGTTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: CIRSSQNKSGFSRSR*HTTSQLWLADSLLS
Trigger: GCTTAGCAACGAGTCTGCCAGCCACAGCTGGGAGGTGGTGTGTCAGCGGCTTCTGGAGAAGCCGCTCTTGTTCTGGGAGGACCTGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG +
Preference number: 5 (lower is better)
Translates to: RAPQPCRGPTFCHGTGKITRRLR*LLRCGV
Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp GCGGGGCCAGACAGCACAGGGCACTGGGTGCTTTTGCTCGGAGACTGGCGATGCTCGCCTTTCTTGTGCTaGTCATGCTCAGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: AGPDSTGHWVLLLGDWRCSPFLC*SCSVEG
Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGA...GCATCGCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGCTGTCTGGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS CCA 90 bp GAGGTGGGCAGGTGTCTGAACCAGCTGCATAGCTTCATCTCCCCTTaGAGGGCACCGATGCCCTTTCCAGTGGGATGCTGCCTTGTGACT +
Preference number: 5 (lower is better)
Translates to: EVGRCLNQLHSFISP*RAPMPFPVGCCLVT
Trigger: AGTCACAAGGCAGCATCCCACTGGAAAGGGCATCGGTGCCCTCCAAGGGGAGATGAAGCTATGCAGCTGGTTCAGACACCTGCCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGATTCTGGAGTCTGCCTaGCTCCGGCCACTCTTCACC +
Preference number: 5 (lower is better)
Translates to: SQGSGQCRPSAGCLLTPRILESA*LRPLFT
Trigger: GGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAAT...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp TCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG +
Preference number: 5 (lower is better)
Translates to: SSLASCLNKEPGCVVGSPTRRLR*LLRCGV
Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...AGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR CAA 90 bp GACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGTTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: DWEGTLLFTCGWEGGARQLPSPF*CLSCSV
Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAA...CTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS GCA 90 bp TTCATCTCCCCTTGGAGGGCACCGATGCCCTTTCCAGTGGGATGCTaGCTTGTGACTGTCTCCAGGGTAGAAAAGAGCAAGCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: FISPWRAPMPFPVGC*LVTVSRVEKSKPQG
Trigger: GCCCTGTGGCTTGCTCTTTTCTACCCTGGAGACAGTCACAAGGCAGCATCCCACTGGAAAGGGCATCGGTGCCCTCCAAGGGGAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp CTCTCCTCCAAGAGCATTATGGAGCAGAGGGCTTCGGCCACAGCCTaGTCCGACACAGCCTGGCATTTGAGCAGCATCTTGCTTTCGTGC +
Preference number: 5 (lower is better)
Translates to: LSSKSIMEQRASATA*SDTAWHLSSILLSC
Trigger: GCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTCCATAATGCTCTTGGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp GGCAGAGTTCTTAGGCTGGTGCGTGGGGGTGGTATCCTTGAGCAATaGTGTGTCACTGGAGGGAAGGTAGGCCAGGAGGTCGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: GRVLRLVRGGGILEQ*CVTGGKVGQEVVQF
Trigger: AAACTGGACGACCTCCTGGCCTACCTTCCCTCCAGTGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGGACACAGCCTGGCATTaGAGCAGCATCTTGCTTTCG +
Preference number: 5 (lower is better)
Translates to: PSPAGGPHSVMELERLVWDTAWH*SSILLS
Trigger: CGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTC...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp CCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGTTCACCTCCTCCCCCTaGCTGCTCAGAACCATGGTG +
Preference number: 5 (lower is better)
Translates to: PCFQTGKEPCFSPVAGRAFTSSP*LLRTMV
Trigger: CACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAA...CGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CAA 90 bp GCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACATATTCTGGAGTCTGCCTaGCTCCGGCCACTCTTCACC +
Preference number: 5 (lower is better)
Translates to: AEARFSPSPTQLKAQGRHILESA*LRPLFT
Trigger: GGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAAT...ATGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp CTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG +
Preference number: 5 (lower is better)
Translates to: LVSRLGRNLAFHLWLGGRTRRLR*LLRCGV
Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...CCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CAA 90 bp CTGGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGAGGCACTGACCTGGGCTaGGGTTTCAACGCTTCTACT +
Preference number: 5 (lower is better)
Translates to: LAEARFSPSPTQLKAQGRGTDLG*GFNAST
Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCC...TCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp GACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGCTTGTGGAACTGGGCTaGGGTTTCAACGCTTCTACT +
Preference number: 5 (lower is better)
Translates to: DWEGTLLFTCGWEGGARQLVELG*GFNAST
Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAG...CTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS GCA 90 bp AGCTTCATCTCCCCTTGGAGGGCACCGATGCCCTTTCCAGTGGGATaGTGCCTTGTGACTGTCTCCAGGGTAGAAAAGAGCAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: SFISPWRAPMPFPVG*CLVTVSRVEKSKPQ
Trigger: CTGTGGCTTGCTCTTTTCTACCCTGGAGACAGTCACAAGGCAGCATCCCACTGGAAAGGGCATCGGTGCCCTCCAAGGGGAGATGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp AAGCCTTCTCTGGTCAGTGTCTGTAACCGATCCAGGAAGAGCTGCTaGATCAGGTCCTCCCAGAACAAGAGCGGCTTCTCCAGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: KPSLVSVCNRSRKSC*IRSSQNKSGFSRSR
Trigger: GCGGCTTCTGGAGAAGCCGCTCTTGTTCTGGGAGGACCTGATGCAGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp ACGACGGACTTGATGCAGGCCACGGACTGCGTACGCAGCATGTCCTaGACGGTCCCAGCATCTGCGTATCGATCAAAGGCAGAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: TTDLMQATDCVRSMS*TVPASAYRSKAEFL
Trigger: TAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp GACATCCTTTTGTTCCCGTGTGACTTCTTCAATGGTGCACAGCTCTaGCTGGATGCAGCCCACGACGGACTTGATGCAGGCCACGGACTG +
Preference number: 5 (lower is better)
Translates to: DILLFPCDFFNGAQL*LDAAHDGLDAGHGL
Trigger: CAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAAAAGGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp TGTGCTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGGTCAAAAGGGTCAATGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: CAEVRCTRRLRLLLR*GVKTSRSKGSMRAS
Trigger: GGAGGCCCTCATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000152653.8
CDS CCA 90 bp AGGTACTCCTGGCTGATGGGATGTGCGAGAGTTCGGAGTGTGGGCTaGAACTCGATAATGGAGGTGGGCAGGTGTCTGAACCAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RYSWLMGCARVRSVG*NSIMEVGRCLNQLH
Trigger: ATGCAGCTGGTTCAGACACCTGCCCACCTCCATTATCGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp TCCTTTTGTTCCCGTGTGACTTCTTCAATGGTGCACAGCTCTGCCTaGATGCAGCCCACGACGGACTTGATGCAGGCCACGGACTGCGTA +
Preference number: 5 (lower is better)
Translates to: SFCSRVTSSMVHSSA*MQPTTDLMQATDCV
Trigger: TACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp TTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCCTCGGTTCTGGGTCATaGGAAATGCCCCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: FPDWEGTLLFTCGWEGGALGSGS*EMPLLS
Trigger: AGAAAGAAGGGGCATTTCCAATGACCCAGAACCGAG...GGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CAA 90 bp CTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG +
Preference number: 5 (lower is better)
Translates to: LYRVLCGLHSLWSGSGYITRRLR*LLRCGV
Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...AATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp GCATCTTTCTATGAGCTCCAGCTAGTGAAACCCTGTACACTCTATTGCGCCGCCTGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: ASFYELQLVKPCTLYCAAWGSWE*KVLLRE
Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...GGCGGCGCAATAGAGTGTACAGGGTTTCACTAGCTGGAGCTCATAGAAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
CDS-3UTR CAA 90 bp CATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGTGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: HSLFPDWEGTLLFTCGWEWGSWE*KVLLRE
Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...CTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CAA 90 bp GAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGTGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: ESLGIVPMLLGHTREPGKWGSWE*KVLLRE
Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...CTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR CAA 90 bp GGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCAGGCCTGCAGACGGCTTaGGGGAGGGGCTTTGCAACA +
Preference number: 5 (lower is better)
Translates to: GQALPIPCFQTGKEPCFSGLQTA*GRGFAT
Trigger: TGTTGCAAAGCCCCTCCCCAAAGCCGTCTGCAGGCC...TGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS TCA 90 bp CTGCGTGCAGCTTGGTGCTGTGAAGGACATCCTTTTGTTCCCGTGTaGCTTCTTCAATGGTGCACAGCTCTGCCTGGATGCAGCCCACGA +
Preference number: 5 (lower is better)
Translates to: LRAAWCCEGHPFVPV*LLQWCTALPGCSPR
Trigger: TCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp CCATTTCTGCAGCGTGTCTTTCAGGTACTCCTGGCTGATGGGATGTaGGAGAGTTCGGAGTGTGGGCTGGAACTCGATAATGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PFLQRVFQVLLADGM*ESSECGLELDNGGG
Trigger: CCCACCTCCATTATCGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGACACGCTGCAGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp GTCCCAGCATCTGCGTATCGATCAAAGGCAGAGTTCTTAGGCTGGTaGGTGGGGGTGGTATCCTTGAGCAATGGTGTGTCACTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: VPASAYRSKAEFLGW*VGVVSLSNGVSLEG
Trigger: TCCCTCCAGTGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp AGAACTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGGTCAAAAGGGTCAATGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RTEVRCTRRLRLLLR*GVKTSRSKGSMRAS
Trigger: GGAGGCCCTCATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS CCA 90 bp ACGGTCCCAGCATCTGCGTATCGATCAAAGGCAGAGTTCTTAGGCTaGTGCGTGGGGGTGGTATCCTTGAGCAATGGTGTGTCACTGGAG +
Preference number: 5 (lower is better)
Translates to: TVPASAYRSKAEFLG*CVGVVSLSNGVSLE
Trigger: CTCCAGTGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGACCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp TTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCGTTTTCCTCTGTGAGTaGCTCATAGGCAGCTATGAC +
Preference number: 5 (lower is better)
Translates to: FPDWEGTLLFTCGWEGGAVFLCE*LIGSYD
Trigger: GTCATAGCTGCCTATGAGCAACTCACAGAGGAAAAC...GGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CAA 90 bp GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACACTCGGTTCTGGGTCATaGGAAATGCCCCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: GRSTFLPISHPTKGTGETLGSGS*EMPLLS
Trigger: AGAAAGAAGGGGCATTTCCAATGACCCAGAACCGAG...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp TCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATATTCTGGAGTCTGCCTaGCTCCGGCCACTCTTCACC +
Preference number: 5 (lower is better)
Translates to: SCAVRSPQPVVWLWVYFYILESA*LRPLFT
Trigger: GGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAAT...ATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGTGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: LPSYLLVCRCLSMGCSPLWGSWE*KVLLRE
Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp GAGTCGTCTTCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCTTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: ESSSSLASCLNKEPGCVVLPSPF*CLSCSV
Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAA...GACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS TCA 90 bp AAATCAGAAATTTCACAAGTGCTGTGCTCCAGACCCGGTAGGCCATaGCGCTCTGTTGGAGCAGGACTTCCTTCACTCCCTGCCACTGGG +
Preference number: 5 (lower is better)
Translates to: KSEISQVLCSRPGRP*RSVGAGLPSLPATG
Trigger: CCCAGTGGCAGGGAGTGAAGGAAGTCCTGCTCCAACAGAGCGTCATGGCCTACCGGGTCTGGAGCACAGCACTTGTGAAATTTCTGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp TCAAAGCCTTCTCTGGTCAGTGTCTGTAACCGATCCAGGAAGAGCTaGTGCATCAGGTCCTCCCAGAACAAGAGCGGCTTCTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SKPSLVSVCNRSRKS*CIRSSQNKSGFSRS
Trigger: GCTTCTGGAGAAGCCGCTCTTGTTCTGGGAGGACCTGATGCAGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp CTTTCGTGCAAAATAGTTGACCGGAAGTGGCTGGCTGCTGCCACCTaGCGGATGAGGATTGGAAATCTCGAGAGGATGGGGCTGTATCTG +
Preference number: 5 (lower is better)
Translates to: LSCKIVDRKWLAAAT*RMRIGNLERMGLYL
Trigger: CAGATACAGCCCCATCCTCTCGAGATTTCCAATCCTCATCCGCCAGGTGGCAGCAGCCAGCCACTTCCGGTCAACTATTTTGCACGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp ATTATGGAGCAGAGGGCTTCGGCCACAGCCTGGTCCGACACAGCCTaGCATTTGAGCAGCATCTTGCTTTCGTGCAAAATAGTTGACCGG +
Preference number: 5 (lower is better)
Translates to: IMEQRASATAWSDTA*HLSSILLSCKIVDR
Trigger: CCGGTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTCCATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp TTGCACATGTCGATCCATTTCTGCAGCGTGTCTTTCAGGTACTCCTaGCTGATGGGATGTGCGAGAGTTCGGAGTGTGGGCTGGAACTCG +
Preference number: 5 (lower is better)
Translates to: LHMSIHFCSVSFRYS*LMGCARVRSVGWNS
Trigger: CGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGACACGCTGCAGAAATGGATCGACATGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp GGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTAGCTCTTTGGAGCTGTaGGAGATGGATTCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: GMLSLGTEQPSTRKTRDVSSLEL*EMDSKP
Trigger: AGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCT...AACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGGTGAAGGACATCCTTTaGTTCCCGTGTGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: SQGSGQCRPSAGCLLTPRVKDIL*FPCDFF
Trigger: GAAGAAGTCACACGGGAACAAAAGGATGTCCTTCAC...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp ATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGGTTTTCCTCTGTGAGTaGCTCATAGGCAGCTATGAC +
Preference number: 5 (lower is better)
Translates to: MGCSPLEQNSRPLGRPGTVFLCE*LIGSYD
Trigger: GTCATAGCTGCCTATGAGCAACTCACAGAGGAAAAC...CGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS TCA 90 bp TGGCAGAGTCTGGCCATGAAGAGGACTGCGTGCAGCTTGGTGCTGTaGAGGACATCCTTTTGTTCCCGTGTGACTTCTTCAATGGTGCAC +
Preference number: 5 (lower is better)
Translates to: WQSLAMKRTACSLVL*RTSFCSRVTSSMVH
Trigger: GTGCACCATTGAAGAAGTCACACGGGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAGTCCTCTTCATGGCCAGACTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp GGCAGGTCGTTGGGGCTCTCGGACCAGAGGAAGAAAGACATGTTCTaGTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GRSLGLSDQRKKDMF*SKWTCLFDVELLVS
Trigger: GGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGAGAGCCCCAACGACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp TTAATGCACGGTGTCCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LMHGVLGLGFNASTG*PRLSCACHAQWKES
Trigger: GGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGACACCGTGCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS GCA 90 bp TCTTTTGGCACTGACCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SFGTDLGLGFNASTG*PRLSCACHAQWKES
Trigger: GGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCCAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp CTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTCTCGGTTCTGGGTCATaGGAAATGCCCCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LYRVLCGLHSLWSGSGYILGSGS*EMPLLS
Trigger: AGAAAGAAGGGGCATTTCCAATGACCCAGAACCGAG...AATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp AACCCTGTACACTCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCGTTTCACCTCCTCCCCCTaGCTGCTCAGAACCATGGTG +
Preference number: 5 (lower is better)
Translates to: NPVHSIAPPLKAALVHCRFTSSP*LLRTMV
Trigger: CACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAA...ACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134418.8
CDS-3UTR CAA 90 bp TCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTCGCCTTTCTTGTGCTaGTCATGCTCAGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: SLSCAVRSPQPVVWLWVYSPFLC*SCSVEG
Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGA...ATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp AGCTTGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGCACGGTGTCCTGGGCTaGGGTTTCAACGCTTCTACT +
Preference number: 5 (lower is better)
Translates to: SLNNEGAGESSSSLASCLHGVLG*GFNAST
Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGGACACCGTG...CAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS TCA 90 bp TTATGGGGCTCCTGGGAGTTGAAAGTGCTGCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACCAAGCCAAATAGAACTGAAGTCCGC +
Preference number: 5 (lower is better)
Translates to: LWGSWELKVLLREAN*FSVPVTKPNRTEVR
Trigger: GCGGACTTCAGTTCTATTTGGCTTGGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS GCA 90 bp TTTCCTCTTGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FPLVELGLGFNASTG*PRLSCACHAQWKES
Trigger: GGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS CCA 90 bp TTGGGGCTCTCGGACCAGAGGAAGAAAGACATGTTCTGCTCAAAGTaGACATGCTTGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LGLSDQRKKDMFCSK*TCLFDVELLVSSSC
Trigger: GCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGAGAGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp CCCATTTCCTCTTGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTaGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PISSCGTGLGFQRFY*LPSPFLCLSCSVEG
Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGAGGAAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS-3UTR CAA 90 bp AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTACGTACATAAGCAGATaGCCGATCCCATTTTTAATG +
Preference number: 5 (lower is better)
Translates to: RAPQPCRGPTFCHGTGKITYISR*PIPFLM
Trigger: CATTAAAAATGGGATCGGCAATCTGCTTATGTACGT...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGCTCGGTTCTGGGTCATaGGAAATGCCCCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: MSVYGMLSLGTEQPSTRKLGSGS*EMPLLS
Trigger: AGAAAGAAGGGGCATTTCCAATGACCCAGAACCGAG...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp CGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTATTTTCACCTCCTCCCCCTaGCTGCTCAGAACCATGGTG +
Preference number: 5 (lower is better)
Translates to: RSPQPVVWLWVYFYFEAIFTSSP*LLRTMV
Trigger: CACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAA...AATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp AATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGAATAAGACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG +
Preference number: 5 (lower is better)
Translates to: NNEGAGESSSSLASCLNKTRRLR*LLRCGV
Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...CTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR CAA 90 bp TATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCATGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: YLESLGIVPMLLGHTREPWGSWE*KVLLRE
Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...TGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137878.2
ENSMUST00000152653.8
CDS-3UTR CAA 90 bp GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACTCGCCTTTCTTGTGCTaGTCATGCTCAGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: AGGPHSVMELERLVWCRNSPFLC*SCSVEG
Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGA...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp GTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTTTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: VRSPQPVVWLWVYFYFEALPSPF*CLSCSV
Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAA...AGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS-3UTR CAA 90 bp GGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGATGATGCCTAATTGGTaGGTTATTTCTAAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: GHLYRVLCGLHSLWSGSGMMPNW*VISKSW
Trigger: CCAGCTTTTAGAAATAACCAACCAATTAGGCATCAT...CCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS GCA 90 bp GGCAGACTCGTTGCTAAGCAAATCCCATATGGCGTCTCTGATGCCTaGCAGACCCTTCATGCTCTTCACGTACATAAGCAGATTGCCGAT +
Preference number: 5 (lower is better)
Translates to: GRLVAKQIPYGVSDA*QTLHALHVHKQIAD
Trigger: ATCGGCAATCTGCTTATGTACGTGAAGAGCATGAAGGGTCTGGCAGGCATCAGAGACGCCATATGGGATTTGCTTAGCAACGAGTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 90 bp CTCTCGGACCAGAGGAAGAAAGACATGTTCTGCTCAAAGTGGACATaGTTGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: LSDQRKKDMFCSKWT*LFDVELLVSSSCRA
Trigger: AGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp GCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTTGGAGATaGATTCAAAGCCTTCTCTGGTCAGTGTCTGTAACCGATCCAGGA +
Preference number: 5 (lower is better)
Translates to: APAELRLEALWSCWR*IQSLLWSVSVTDPG
Trigger: TCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACCGCAGCTCCTCCTTCTaGTGTTCGATCTCGGCTCGG +
Preference number: 5 (lower is better)
Translates to: YLLVCRCLSMGCSPLEQNRSSSF*CSISAR
Trigger: CCGAGCCGAGATCGAACACAAGAAGGAGGAGCTGCG...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGAACACGGGCTAATGGCTaGGGCTTTCATGGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: PHSVMELERLVWCRNRSRTRANG*GFHGEA
Trigger: GGCCTCTCCATGAAAGCCCAAGCCATTAGCCCGTGT...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp CTAGAAGCTCTTTGGAGCTGTTGGAGATGGATTCAAAGCCTTCTCTaGTCAGTGTCTGTAACCGATCCAGGAAGAGCTGCTGCATCAGGT +
Preference number: 5 (lower is better)
Translates to: LEALWSCWRWIQSLL*SVSVTDPGRAAASG
Trigger: ACCTGATGCAGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp TCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTTaGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTCTGTAACCGAT +
Preference number: 5 (lower is better)
Translates to: SPAPAELRLEALWSC*RWIQSLLWSVSVTD
Trigger: ATCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp AGTTGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTaGAGCTGTTGGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: SCWSPAPAELRLEAL*SCWRWIQSLLWSVS
Trigger: AGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp ACATGTTCTGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTTaGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: TCSAQSGHACSMWSC*SPAPAELRLEALWS
Trigger: GCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp ATGCAGGTCTTCAGCATCTCCTGTAGGGTGACCTTTGGCAAAGCATaGCCTCCAACCCGATTAACTTCCTGGCATAAGCTAAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: MQVFSISCRVTFGKA*PPTRLTSWHKLNRK
Trigger: CTTCCTGTTTAGCTTATGCCAGGAAGTTAATCGGGTTGGAGGCCATGCTTTGCCAAAGGTCACCCTACAGGAGATGCTGAAGACCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000148736.8
CDS-3UTR CAA 90 bp CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAGAGCCAGGCAAGCTaGAATAATGAAGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LPSYLLVCRCLSMGCSPLESQAS*NNEGAG
Trigger: ACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCTC...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 90 bp GGAAGAAAGACATGTTCTGCTCAAAGTGGACATGCTTGTTCGATGTaGAGTTGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GRKTCSAQSGHACSM*SCWSPAPAELRLEA
Trigger: AGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp TTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGTCTCGAAGAGCGCGTaGGGATCGCGCAGATCCAGC +
Preference number: 5 (lower is better)
Translates to: FHILFSSSLYPRRYREHCVSKSA*GSRRSS
Trigger: GCTGGATCTGCGCGATCCCAACGCGCTCTTCGAGAC...GCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGTTCACCTCCTCCCCCTaGCTGCTCAGAACCATGGTG +
Preference number: 5 (lower is better)
Translates to: ILFSSSLYPRRYREHCAVFTSSP*LLRTMV
Trigger: CACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAA...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGATTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: PHSVMELERLVWCRNRSRLPSPF*CLSCSV
Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAA...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp TGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGCTTGAATTCGCCTTTCTTGTGCTaGTCATGCTCAGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: WALFLCYLVILESQASLNSPFLC*SCSVEG
Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGA...ATTCAAGCTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS-3UTR CAA 90 bp TTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGGGGCCAACCTGGGCTaGGGTTTCAACGCTTCTACT +
Preference number: 5 (lower is better)
Translates to: FHILFSSSLYPRRYREHCGANLG*GFNAST
Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGGTTGGCCCC...GCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp GGAGAATATCACTTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATTTCGATGTGGAGTTGTaGGTCTCCAGCTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GEYHFHILFSSSLYPRRYFDVEL*VSSSCR
Trigger: TCTGCAGGAGCTGGAGACCAACAACTCCACATCGAA...ATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAAGTGATATTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCATCAAAGTGGACATGCTaGTTCGATGTGGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GTLSTFPSCGLYFTFEFPSKWTC*FDVELL
Trigger: CAACAACTCCACATCGAACAAGCATGTCCACTTTGA...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS-3UTR CAA 90 bp GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCACATTTGAGCAGCATCTaGCTTTCGTGCAAAATAGTT +
Preference number: 5 (lower is better)
Translates to: GTLSTFPSCGLYFTFEFPHLSSI*LSCKIV
Trigger: AACTATTTTGCACGAAAGCAAGATGCTGCTCAAATG...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp GAACTTCTCGGACGGCGGCTGTGGCTGCGGGGCCCGTaGGACCCGGGGCGCCACGGAGCCGGCCTGGCGGAG +
Preference number: 6 (lower is better)
Translates to: ELLGRRLWLRGP*DPGRHGAGLAE
Trigger: CTCCGCCAGGCCGGCTCCGTGGCGCCCCGGGTCCCACGGGCCCCGCAGCCACAGCCGCCGTCCGAGAAGTTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp ACGGCGTCCACCAGGCCCTCGGCGCAGCGGCGCATCTaGCCGATGGTGTCCGCCGCCTCGATCAGGTCGCGG +
Preference number: 6 (lower is better)
Translates to: TASTRPSAQRRI*PMVSAASIRSR
Trigger: CCGCGACCTGATCGAGGCGGCGGACACCATCGGCCAGATGCGCCGCTGCGCCGAGGGCCTGGTGGACGCCGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
CDS CCA 72 bp CCACCAGGCCCTCGGCGCAGCGGCGCATCTGGCCGATaGTGTCCGCCGCCTCGATCAGGTCGCGGTACCGCT +
Preference number: 6 (lower is better)
Translates to: PPGPRRSGASGR*CPPPRSGRGTA
Trigger: AGCGGTACCGCGACCTGATCGAGGCGGCGGACACCATCGGCCAGATGCGCCGCTGCGCCGAGGGCCTGGTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
CDS TCA 72 bp ACCTGGCGCTCCAGCCCGCGGATCTCCTCCGCTCCATaGGTCTCGAAGAGCGCGTTGGGATCGCGCAGATCC +
Preference number: 6 (lower is better)
Translates to: TWRSSPRISSAP*VSKSALGSRRS
Trigger: GGATCTGCGCGATCCCAACGCGCTCTTCGAGACTCATGGAGCGGAGGAGATCCGCGGGCTGGAGCGCCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
CDS GCA 72 bp AGAAGCAGTGATCGAGTGAATCCACAAATCAGAAACTaGGGGGCCCGTGGGACCCGGGGCGCCACGGAGCCG +
Preference number: 6 (lower is better)
Translates to: RSSDRVNPQIRN*GARGTRGATEP
Trigger: CGGCTCCGTGGCGCCCCGGGTCCCACGGGCCCCGCAGTTTCTGATTTGTGGATTCACTCGATCACTGCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000063776.14
CDS CCA 72 bp GGGCTTGGCGCGGAGAGCTCTCCTCCAAGAGCATTATaGAGCAGAGGGCTTCGGCCACAGCCTGGTCCGACA +
Preference number: 6 (lower is better)
Translates to: GLGAESSPPRAL*SRGLRPQPGPT
Trigger: TGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTCCATAATGCTCTTGGAGGAGAGCTCTCCGCGCCAAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp ATGCAGCCCACGACGGACTTGATGCAGGCCACGGACTaGGTACGCAGCATGTCCTGCACGGTCCCAGCATCT +
Preference number: 6 (lower is better)
Translates to: MQPTTDLMQATD*VRSMSCTVPAS
Trigger: AGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 72 bp TGCTGTGCTCCAGACCCGGTAGGCCATGACGCTCTGTaGGAGCAGGACTTCCTTCACTCCCTGCCACTGGGC +
Preference number: 6 (lower is better)
Translates to: CCAPDPVGHDAL*EQDFLHSLPLG
Trigger: GCCCAGTGGCAGGGAGTGAAGGAAGTCCTGCTCCAACAGAGCGTCATGGCCTACCGGGTCTGGAGCACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp TCTTCAATGGTGCACAGCTCTGCCTGGATGCAGCCCACGACGGACTaGATGCAGGCCACGGACTGCGTACGCAGCATGTCCTGCACGGTC +
Preference number: 6 (lower is better)
Translates to: SSMVHSSAWMQPTTD*MQATDCVRSMSCTV
Trigger: GACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp GCCTCTCGGTCATCTTCTCCATTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCTCCTCCCCCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: ASRSSSPFWSLP*SGHSSPPPPCC
Trigger: GCAGCAAGGGGGAGGAGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGACCGAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000134418.8
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS TCA 72 bp GAACCCCCGCACTGTCCCACAACACACTGCTTTAGGTaGGGGCACAGCTCTCCCAGAGACTGGCAGAGTCTG +
Preference number: 6 (lower is better)
Translates to: EPPHCPTTHCFR*GHSSPRDWQSL
Trigger: CAGACTCTGCCAGTCTCTGGGAGAGCTGTGCCCTCACCTAAAGCAGTGTGTTGTGGGACAGTGCGGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS TCA 72 bp TCTTCACCTCCTCCCCCTTGCTGCTCAGAACCATGGTaGGGTAGCGTAGGTCGTAGAGGAGCTGCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: SSPPPPCCSEPW*GSVGRRGAAGL
Trigger: GAGCCCTGCAGCTCCTCTACGACCTACGCTACCTCACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000134418.8
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS CCA 72 bp CTTAGGCTGGTGCGTGGGGGTGGTATCCTTGAGCAATaGTGTGTCACTGGAGGGAAGGTAGGCCAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: LRLVRGGGILEQ*CVTGGKVGQEV
Trigger: GACCTCCTGGCCTACCTTCCCTCCAGTGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp CGTCTGAATAGTCGCCTTTCTGGCCAGCAGGAAGTCTGTGAGGGCTaGGCGCGGAGAGCTCTCCTCCAAGAGCATTATGGAGCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: RLNSRLSGQQEVCEG*ARRALLQEHYGAEG
Trigger: GCCCTCTGCTCCATAATGCTCTTGGAGGAGAGCTCTCCGCGCCAAGCCCTCACAGACTTCCTGCTGGCCAGAAAGGCGACTATTCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp TCGGCCACAGCCTGGTCCGACACAGCCTGGCATTTGAGCAGCATCTaGCTTTCGTGCAAAATAGTTGACCGGAAGTGGCTGGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SATAWSDTAWHLSSI*LSCKIVDRKWLAAA
Trigger: GGCAGCAGCCAGCCACTTCCGGTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS TCA 72 bp TCCTGGGAGTTGAAAGTGCTGCTCCGGGAGGCAAACTaGTTCTCTGTGCTGAAGTCCGCTGCACCAGGCGGT +
Preference number: 6 (lower is better)
Translates to: SWELKVLLREAN*FSVLKSAAPGG
Trigger: ACCGCCTGGTGCAGCGGACTTCAGCACAGAGAATCAGTTTGCCTCCCGGAGCAGCACTTTCAACTCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000152653.8
CDS GCA 72 bp TCCCCTTGGAGGGCACCGATGCCCTTTCCAGTGGGATaGTGCCTTGTGACTGTCTCCAGGGTAGAAAAGAGC +
Preference number: 6 (lower is better)
Translates to: SPWRAPMPFPVG*CLVTVSRVEKS
Trigger: GCTCTTTTCTACCCTGGAGACAGTCACAAGGCAGCATCCCACTGGAAAGGGCATCGGTGCCCTCCAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp TTGATGCAGGCCACGGACTGCGTACGCAGCATGTCCTaGACGGTCCCAGCATCTGCGTATCGATCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: LMQATDCVRSMS*TVPASAYRSKA
Trigger: TGCCTTTGATCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp CCGGGAGGCAAACTGATTCTCTGTGCTGAAGTCCGCTaGACCAGGCGGTTGAGGTTGCTGTTGAGATGCGGT +
Preference number: 6 (lower is better)
Translates to: PGGKLILCAEVR*TRRLRLLLRCG
Trigger: ACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAGAATCAGTTTGCCTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000152653.8
CDS GCA 72 bp GCCTGCAGACGGCTTTGGGGAGGGGCTTTGCAACACTaGCCCATTTCCTCTTGTGGAACTGGGCTTGGGTTT +
Preference number: 6 (lower is better)
Translates to: ACRRLWGGALQH*PISSCGTGLGF
Trigger: AAACCCAAGCCCAGTTCCACAAGAGGAAATGGGGCAGTGTTGCAAAGCCCCTCCCCAAAGCCGTCTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS CAA 90 bp GAGCAGAGGGCTTCGGCCACAGCCTGGTCCGACACAGCCTGGCATTaGAGCAGCATCTTGCTTTCGTGCAAAATAGTTGACCGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: EQRASATAWSDTAWH*SSILLSCKIVDRKW
Trigger: CCACTTCCGGTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS TCA 72 bp AGGCCAGCGGCAGTATGTTATGGGGCTCCTGGGAGTTaGAAGTGCTGCTCCGGGAGGCAAACTGATTCTCTG +
Preference number: 6 (lower is better)
Translates to: RPAAVCYGAPGS*KCCSGRQTDSL
Trigger: CAGAGAATCAGTTTGCCTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCATAACATACTGCCGCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000134418.8
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
ENSMUST00000152653.8
CDS GCA 72 bp CTGGTCAGTGTCTGTAACCGATCCAGGAAGAGCTGCTaGATCAGGTCCTCCCAGAACAAGAGCGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LVSVCNRSRKSC*IRSSQNKSGFS
Trigger: GGAGAAGCCGCTCTTGTTCTGGGAGGACCTGATGCAGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp CTGCGTACGCAGCATGTCCTGCACGGTCCCAGCATCTaGGTATCGATCAAAGGCAGAGTTCTTAGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: LRTQHVLHGPSI*VSIKGRVLRLV
Trigger: CACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp TTGTTCCCGTGTGACTTCTTCAATGGTGCACAGCTCTaGCTGGATGCAGCCCACGACGGACTTGATGCAGGC +
Preference number: 6 (lower is better)
Translates to: LFPCDFFNGAQL*LDAAHDGLDAG
Trigger: GCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp AAGAGCATTATGGAGCAGAGGGCTTCGGCCACAGCCTaGTCCGACACAGCCTGGCATTTGAGCAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: KSIMEQRASATA*SDTAWHLSSIL
Trigger: CAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTCCATAATGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp TGGCTGATGGGATGTGCGAGAGTTCGGAGTGTGGGCTaGAACTCGATAATGGAGGTGGGCAGGTGTCTGAAC +
Preference number: 6 (lower is better)
Translates to: WLMGCARVRSVG*NSIMEVGRCLN
Trigger: GTTCAGACACCTGCCCACCTCCATTATCGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp GGGGGCCAACCTGGGCTTGGGTTTCAACGCTTCTACTaGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCA +
Preference number: 6 (lower is better)
Translates to: GGQPGLGFQRFY*LPSPFLCLSCS
Trigger: TGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTTGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
CDS CAA 72 bp GCTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTaGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGG +
Preference number: 6 (lower is better)
Translates to: AEVRCTRRLRLL*RCGVKTSRSKG
Trigger: CCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000152653.8
CDS CAA 72 bp CTCTGTGCTGAAGTCCGCTGCACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: LCAEVRCTRRLR*LLRCGVKTSRS
Trigger: TGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000152653.8
CDS TCA 72 bp ATTTCACAAGTGCTGTGCTCCAGACCCGGTAGGCCATaGCGCTCTGTTGGAGCAGGACTTCCTTCACTCCCT +
Preference number: 6 (lower is better)
Translates to: ISQVLCSRPGRP*RSVGAGLPSLP
Trigger: AGGGAGTGAAGGAAGTCCTGCTCCAACAGAGCGTCATGGCCTACCGGGTCTGGAGCACAGCACTTGTGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp TCCCAGAGACTGGCAGAGTCTGGCCATGAAGAGGACTaGGTGCAGCTTGGTGCTGTGAAGGACATCCTTTTG +
Preference number: 6 (lower is better)
Translates to: SQRLAESGHEED*VQLGAVKDILL
Trigger: CAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAGTCCTCTTCATGGCCAGACTCTGCCAGTCTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp GTCCGCTGCACCAGGCGGTTGAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGGTCAAAAGGGTCAATG +
Preference number: 6 (lower is better)
Translates to: VRCTRRLRLLLR*GVKTSRSKGSM
Trigger: CATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000134418.8
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
ENSMUST00000152653.8
CDS GCA 72 bp GCCAACCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGG +
Preference number: 6 (lower is better)
Translates to: ANLGLGFNASTG*PRLSCACHAQW
Trigger: CCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
CDS GCA 72 bp GGTGTCCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGG +
Preference number: 6 (lower is better)
Translates to: GVLGLGFNASTG*PRLSCACHAQW
Trigger: CCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS CCA 72 bp AAAATAGTTGACCGGAAGTGGCTGGCTGCTGCCACCTaGCGGATGAGGATTGGAAATCTCGAGAGGATGGGG +
Preference number: 6 (lower is better)
Translates to: KIVDRKWLAAAT*RMRIGNLERMG
Trigger: CCCCATCCTCTCGAGATTTCCAATCCTCATCCGCCAGGTGGCAGCAGCCAGCCACTTCCGGTCAACTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp CAGAGGGCTTCGGCCACAGCCTGGTCCGACACAGCCTaGCATTTGAGCAGCATCTTGCTTTCGTGCAAAATA +
Preference number: 6 (lower is better)
Translates to: QRASATAWSDTA*HLSSILLSCKI
Trigger: TATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp TCGATCCATTTCTGCAGCGTGTCTTTCAGGTACTCCTaGCTGATGGGATGTGCGAGAGTTCGGAGTGTGGGC +
Preference number: 6 (lower is better)
Translates to: SIHFCSVSFRYS*LMGCARVRSVG
Trigger: GCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGACACGCTGCAGAAATGGATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp GGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGATCTGACTGGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: GCPRLSCACHAQ*KESKPDLTGGQ
Trigger: CTGGCCTCCAGTCAGATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS CCA 72 bp GCACGGTGTCCTGGGCTTGGGTTTCAACGCTTCTACTaGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCA +
Preference number: 6 (lower is better)
Translates to: ARCPGLGFQRFY*LPSPFLCLSCS
Trigger: TGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGACACCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS CAA 72 bp ACTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTaGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGG +
Preference number: 6 (lower is better)
Translates to: TEVRCTRRLRLL*RCGVKTSRSKG
Trigger: CCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS CAA 72 bp GGCCAACCTGGGCTTGGGTTTCAACGCTTCTACTGGTaGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: GQPGLGFQRFYW*PSPFLCLSCSV
Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
CDS CAA 72 bp CGGTGTCCTGGGCTTGGGTTTCAACGCTTCTACTGGTaGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: RCPGLGFQRFYW*PSPFLCLSCSV
Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGACACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137878.2
CDS GCA 72 bp GACACAGCCTGGCATTTGAGCAGCATCTTGCTTTCGTaGAAAATAGTTGACCGGAAGTGGCTGGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: DTAWHLSSILLS*KIVDRKWLAAA
Trigger: GGCAGCAGCCAGCCACTTCCGGTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp CAGCGTGTCTTTCAGGTACTCCTGGCTGATGGGATGTaGGAGAGTTCGGAGTGTGGGCTGGAACTCGATAAT +
Preference number: 6 (lower is better)
Translates to: QRVFQVLLADGM*ESSECGLELDN
Trigger: ATTATCGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGACACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp GTGCCTGTAACCAAGCCAAATAGAACTGAAGTCCGCTaGACCAGGCGGTTGAGGTTGCTGTTGAGATGCGGT +
Preference number: 6 (lower is better)
Translates to: VPVTKPNRTEVR*TRRLRLLLRCG
Trigger: ACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATTTGGCTTGGTTACAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS GCA 72 bp ACTGACCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGG +
Preference number: 6 (lower is better)
Translates to: TDLGLGFNASTG*PRLSCACHAQW
Trigger: CCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142069.8
CDS GCA 72 bp GTGGAACTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGG +
Preference number: 6 (lower is better)
Translates to: VELGLGFNASTG*PRLSCACHAQW
Trigger: CCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS CCA 72 bp GCATCTGCGTATCGATCAAAGGCAGAGTTCTTAGGCTaGTGCGTGGGGGTGGTATCCTTGAGCAATGGTGTG +
Preference number: 6 (lower is better)
Translates to: ASAYRSKAEFLG*CVGVVSLSNGV
Trigger: CACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp GGCTTTGCAACACTGCCCCATTTCCTCTTGTGGAACTaGGCTTGGGTTTCAACGCTTCTACTGGTTGCCCTC +
Preference number: 6 (lower is better)
Translates to: GFATLPHFLLWN*AWVSTLLLVAL
Trigger: GAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGAGGAAATGGGGCAGTGTTGCAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS CAA 72 bp GCTTCGGCCACAGCCTGGTCCGACACAGCCTGGCATTaGAGCAGCATCTTGCTTTCGTGCAAAATAGTTGAC +
Preference number: 6 (lower is better)
Translates to: ASATAWSDTAWH*SSILLSCKIVD
Trigger: GTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp ATTCTCTGTGCTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTaGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGGTCAATGAGG +
Preference number: 6 (lower is better)
Translates to: ILCAEVRCTRRLRLL*RCGVKTSRSKGSMR
Trigger: CCTCATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000152653.8
CDS CAA 90 bp GGAGGCAAACTGATTCTCTGTGCTGAAGTCCGCTGCACCAGGCGGTaGAGGTTGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCAAAA +
Preference number: 6 (lower is better)
Translates to: GGKLILCAEVRCTRR*RLLLRCGVKTSRSK
Trigger: TTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAGAATCAGTTTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000152653.8
CDS TCA 72 bp CTGGCCATGAAGAGGACTGCGTGCAGCTTGGTGCTGTaGAGGACATCCTTTTGTTCCCGTGTGACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: LAMKRTACSLVL*RTSFCSRVTSS
Trigger: TGAAGAAGTCACACGGGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAGTCCTCTTCATGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS TCA 72 bp TTGTGCTTGTCATGCTCAGTGGAAGGAGTCCAAACCTaGTCTGACTGGAGGCCAGCGGCAGTATGTTATGGG +
Preference number: 6 (lower is better)
Translates to: LCLSCSVEGVQT*SDWRPAAVCYG
Trigger: CCCATAACATACTGCCGCTGGCCTCCAGTCAGATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS GCA 72 bp TCTGCGTATCGATCAAAGGCAGAGTTCTTAGGCTGGTaGGTGGGGGTGGTATCCTTGAGCAATGGTGTGTCA +
Preference number: 6 (lower is better)
Translates to: SAYRSKAEFLGW*VGVVSLSNGVS
Trigger: TGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 72 bp AATAGAACTGAAGTCCGCTGCACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: NRTEVRCTRRLR*LLRCGVKTSRS
Trigger: TGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS CAA 72 bp GGGTTTCAACGCTTCTACTGGTTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTGGAAGGAGTCCAAACC +
Preference number: 6 (lower is better)
Translates to: GFQRFYWLPSPF*CLSCSVEGVQT
Trigger: GGTTTGGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS CAA 72 bp TGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTGGTaGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: CGTGLGFQRFYW*PSPFLCLSCSV
Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS CAA 90 bp CATGAAGAGGACTGCGTGCAGCTTGGTGCTGTGAAGGACATCCTTTaGTTCCCGTGTGACTTCTTCAATGGTGCACAGCTCTGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: HEEDCVQLGAVKDIL*FPCDFFNGAQLCLD
Trigger: ATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAGTCCTCTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp CCAAATAGAACTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTaGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGGTCAATGAGG +
Preference number: 6 (lower is better)
Translates to: PNRTEVRCTRRLRLL*RCGVKTSRSKGSMR
Trigger: CCTCATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS CAA 90 bp ACCAAGCCAAATAGAACTGAAGTCCGCTGCACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGGTCA +
Preference number: 6 (lower is better)
Translates to: TKPNRTEVRCTRRLR*LLRCGVKTSRSKGS
Trigger: TGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATTTGGCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS CAA 90 bp AAACTGATTCTCTGTGCTGAAGTCCGCTGCACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGGTCA +
Preference number: 6 (lower is better)
Translates to: KLILCAEVRCTRRLR*LLRCGVKTSRSKGS
Trigger: TGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAGAATCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134418.8
ENSMUST00000152653.8
CDS CAA 90 bp GTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTaGGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTCTGTAACCGA +
Preference number: 6 (lower is better)
Translates to: VSSSCRAETRSSLEL*EMDSKPSLVSVCNR
Trigger: TCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp GAGTTGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTaGGAGCTGTTGGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: ELLVSSSCRAETRSS*ELLEMDSKPSLVSV
Trigger: GACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp TCGGACCAGAGGAAGAAAGACATGTTCTGCTCAAAGTGGACATGCTaGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTGCAGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: SDQRKKDMFCSKWTC*FDVELLVSSSCRAE
Trigger: CTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp CCTGTAACCAAGCCAAATAGAACTGAAGTCCGCTGCACCAGGCGGTaGAGGTTGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCAAAA +
Preference number: 6 (lower is better)
Translates to: PVTKPNRTEVRCTRR*RLLLRCGVKTSRSK
Trigger: TTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATTTGGCTTGGTTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS CAA 90 bp ATTTCCTCTTGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTGGTaGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGAGTC +
Preference number: 6 (lower is better)
Translates to: ISSCGTGLGFQRFYW*PSPFLCLSCSVEGV
Trigger: GACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGAGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS GCA 72 bp TGCTTGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTaGAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: CLFDVELLVSSS*RAETRSSLELL
Trigger: CAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp GCTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTTaGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCT +
Preference number: 6 (lower is better)
Translates to: AQSGHACSMWSC*SPAPAELRLEA
Trigger: AGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp ACCTTCAGCTTAGAATCCAGGGCAGAACAGAAGTTCTaGACACACGGGCTAATGGCTTGGGCTTTCATGGAG +
Preference number: 6 (lower is better)
Translates to: TFSLESRAEQKF*THGLMAWAFME
Trigger: CTCCATGAAAGCCCAAGCCATTAGCCCGTGTGTCCAGAACTTCTGTTCTGCCCTGGATTCTAAGCTGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp TCTTGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTaGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCA +
Preference number: 6 (lower is better)
Translates to: SCGTGLGFQRFY*LPSPFLCLSCS
Trigger: TGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148736.8
CDS CAA 72 bp TGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTaGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGC +
Preference number: 6 (lower is better)
Translates to: CSKWTCLFDVEL*VSSSCRAETRS
Trigger: GCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp GACATGTTCTGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTaGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: DMFCSKWTCLFDVEL*VSSSCRAETRSSLE
Trigger: CTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS TCA 72 bp TCCTGGGAGTTGAAAGTGCTGCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACCAAGCCAAATAGAACT +
Preference number: 6 (lower is better)
Translates to: SWELKVLLREAN*FSVPVTKPNRT
Trigger: AGTTCTATTTGGCTTGGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAGCAGCACTTTCAACTCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000137878.2
ENSMUST00000142069.8
ENSMUST00000148736.8
CDS GCA 72 bp GTTGCTAAGCAAATCCCATATGGCGTCTCTGATGCCTaGCAGACCCTTCATGCTCTTCACGTACATAAGCAG +
Preference number: 6 (lower is better)
Translates to: VAKQIPYGVSDA*QTLHALHVHKQ
Trigger: CTGCTTATGTACGTGAAGAGCATGAAGGGTCTGGCAGGCATCAGAGACGCCATATGGGATTTGCTTAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS GCA 72 bp TTGGGGCTCTCGGACCAGAGGAAGAAAGACATGTTCTaGTCAAAGTGGACATGCTTGTTCGATGTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: LGLSDQRKKDMF*SKWTCLFDVEL
Trigger: CAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGAGAGCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp CTTTGGAGCTGTTGGAGATGGATTCAAAGCCTTCTCTaGTCAGTGTCTGTAACCGATCCAGGAAGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LWSCWRWIQSLL*SVSVTDPGRAA
Trigger: AGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp CCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTTaGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: PAELRLEALWSC*RWIQSLLWSVS
Trigger: AGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 72 bp TCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTaGGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: SCRAETRSSLEL*EMDSKPSLVSV
Trigger: GACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 72 bp TTCTGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTaGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGA +
Preference number: 6 (lower is better)
Translates to: FCSKWTCLFDVE*LVSSSCRAETR
Trigger: TCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CCA 72 bp GAGCTGAGACTAGAAGCTCTTTGGAGCTGTTGGAGATaGATTCAAAGCCTTCTCTGGTCAGTGTCTGTAACC +
Preference number: 6 (lower is better)
Translates to: ELRLEALWSCWR*IQSLLWSVSVT
Trigger: GGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 72 bp AGGAAGAAAGACATGTTCTGCTCAAAGTGGACATGCTaGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RKKDMFCSKWTC*FDVELLVSSSC
Trigger: GCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp AAAGACATGTTCTGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTaGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: KDMFCSKWTCLFDVE*LVSSSCRAETRSSL
Trigger: CAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 90 bp CATTGGAAATGCCCCTTCTTTCTTTATCTGGTTTTCCTCTGTGAGTaGCTCATAGGCAGCTATGACTTGGGCCATGCAGGTCTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: HWKCPFFLYLVFLCE*LIGSYDLGHAGLQH
Trigger: ATGCTGAAGACCTGCATGGCCCAAGTCATAGCTGCCTATGAGCAACTCACAGAGGAAAACCAGATAAAGAAAGAAGGGGCATTTCCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000148736.8
CDS CCA 72 bp TTTGGCAAAGCATGGCCTCCAACCCGATTAACTTCCTaGCATAAGCTAAACAGGAAGGACTGTACATACCAG +
Preference number: 6 (lower is better)
Translates to: FGKAWPPTRLTS*HKLNRKDCTYQ
Trigger: CTGGTATGTACAGTCCTTCCTGTTTAGCTTATGCCAGGAAGTTAATCGGGTTGGAGGCCATGCTTTGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018805.15
ENSMUST00000063776.14
ENSMUST00000148736.8
CDS CAA 90 bp CTGATGCCTGCCAGACCCTTCATGCTCTTCACGTACATAAGCAGATaGCCGATCCCATTTTTAATGTCTTCATTGCACATGTCGATCCAT +
Preference number: 6 (lower is better)
Translates to: LMPARPFMLFTYISR*PIPFLMSSLHMSIH
Trigger: ATGGATCGACATGTGCAATGAAGACATTAAAAATGGGATCGGCAATCTGCTTATGTACGTGAAGAGCATGAAGGGTCTGGCAGGCATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15
CDS CAA 72 bp GCCAGACCCTTCATGCTCTTCACGTACATAAGCAGATaGCCGATCCCATTTTTAATGTCTTCATTGCACATG +
Preference number: 6 (lower is better)
Translates to: ARPFMLFTYISR*PIPFLMSSLHM
Trigger: CATGTGCAATGAAGACATTAAAAATGGGATCGGCAATCTGCTTATGTACGTGAAGAGCATGAAGGGTCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018805.15