Pregenerated sensors for COG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018661Ensembl transcript IDs: ENSMUST00000018805.15, ENSMUST00000063776.14, ENSMUST00000134418.8, ENSMUST00000137878.2, ENSMUST00000142069.8, ENSMUST00000148736.8, ENSMUST00000152653.8
Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGACCAAGTGCAGGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTaGCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTG | + |
Preference number: 1 (lower is better) Translates to: RPSAGCLLTPRAPQP*RGPTFCHGTGKIGV Trigger: CACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR CCA 90 bp | CCATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTaGCTGGGAGGGCGGGGCCAGACAGCACAGGGCACTGGGTGCTTT | + |
Preference number: 1 (lower is better) Translates to: PFLVSRLGRNLAFHL*LGGRGQTAQGTGCF Trigger: AAAGCACCCAGTGCCCTGTGCTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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3UTR TCA 90 bp | AAGGCACAGGGGAGACATCTGAAGACAAAGGCTCTTCCCATGCTCTaGCCAGTGTCGGGGTGCCAGTCAACAGTCATTCGCCCTACAGGA | + |
Preference number: 1 (lower is better) Translates to: KAQGRHLKTKALPML*PVSGCQSTVIRPTG Trigger: TCCTGTAGGGCGAATGACTGTTGACTGGCACCCCGACACTGGTCAGAGCATGGGAAGAGCCTTTGTCTTCAGATGTCTCCCCTGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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3UTR CCA 90 bp | AGGGAGGGGTTGGAAGAACCACGAGAGCCTCTTTTGGCACTGACCTaGGCTTGGGTTTCAACGCTTCTACTGGTTGCCCTCGCCTTTCTT | + |
Preference number: 1 (lower is better) Translates to: REGLEEPREPLLALT*AWVSTLLLVALAFL Trigger: AAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCCAAAAGAGGCTCTCGTGGTTCTTCCAACCCCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR TCA 90 bp | ATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTaGATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACTCTGGAGA | + |
Preference number: 1 (lower is better) Translates to: IMKVQVSRLPRLQAA*IRSQDASSGHLLWR Trigger: TCTCCAGAGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR CCA 90 bp | CCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTaGTGTGGTGTAGAAACAGGAGCAGAGGCACCTCTAGGAAAAACA | + |
Preference number: 1 (lower is better) Translates to: PALPGAHILSWNWKD*CGVETGAEAPLGKT Trigger: TGTTTTTCCTAGAGGTGCCTCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR TCA 90 bp | CCCCTTGCAGCCCTCGAGTTAATGTTAAAAGTTAGCATCACCTGGTaGGAGGGCGTGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTG | + |
Preference number: 1 (lower is better) Translates to: PLAALELMLKVSITW*EGVARLCPFLVSRL Trigger: CAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAGGTGATGCTAACTTTTAACATTAACTCGAGGGCTGCAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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3UTR GCA 90 bp | TTGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACTCTG | + |
Preference number: 1 (lower is better) Translates to: LNNEGAGESSSSLAS*LNKEPGCVVGSPTL Trigger: CAGAGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR GCA 90 bp | AACAGTCATTCGCCCTACAGGATACAAGAGGCCATCTCTATCGTGTaGTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTT | + |
Preference number: 1 (lower is better) Translates to: NSHSPYRIQEAISIV*CAVSTACGLALGIF Trigger: AAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCTCTTGTATCCTGTAGGGCGAATGACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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3UTR GCA 90 bp | GCATCTTTCTATGAGCTCCAGCTAGTGAAACCCTGTACACTCTATTaGGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCGTATGATGCC | + |
Preference number: 1 (lower is better) Translates to: ASFYELQLVKPCTLY*AAIKSSLSALPYDA Trigger: GGCATCATACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGGTTTCACTAGCTGGAGCTCATAGAAAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR GCA 90 bp | CCTGTACACTCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTaGCGTATGATGCCTAATTGGTTGGTTATTTCTAAAAGCTGGTGG | + |
Preference number: 1 (lower is better) Translates to: PVHSIAPPLKAALVH*RMMPNWLVISKSWW Trigger: CCACCAGCTTTTAGAAATAACCAACCAATTAGGCATCATACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR CAA 90 bp | TGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTGGGAAGGAACCTaGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGCACAGG | + |
Preference number: 2 (lower is better) Translates to: WPGFAHSLFPDWEGT*LFTCGWEGGARQHR Trigger: CCTGTGCTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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3UTR-3UTR GCA 90 bp | ATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTCAGTGCAGACCAAGTaGAGGCTGCCTGCTAACACC | + |
Preference number: 2 (lower is better) Translates to: MGCSPLEQNSRPLGRPGTSVQTK*RLPANT Trigger: GGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGA...CGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR CAA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATaGGTGTGGTGTAGAAACAGGAGCAGAGGCACCTCTAGGAAAAAC | + |
Preference number: 2 (lower is better) Translates to: PSPAGGPHSVMELER*VWCRNRSRGTSRKN Trigger: GTTTTTCCTAGAGGTGCCTCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR CAA 90 bp | TTAGCATCACCTGGTGAGAGGGCGTGGCCAGGCTTTGCCCATTCCTaGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGG | + |
Preference number: 2 (lower is better) Translates to: LASPGERAWPGFAHS*FPDWEGTLLFTCGW Trigger: CCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAGGTGATGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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3UTR-3UTR GCA 90 bp | AAGAATTTAGTGCCTTTCAAGCACAGGTGTAACAAGGGCCGTCCCCCTTGCAGCGCACAGGGCACTGGGTaGTTTTGCTCGGAGACTGGC | + |
Preference number: 2 (lower is better) Translates to: KNLVPFKHRCNKGRPPCSAQGTG*FCSETG Trigger: GCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGC...GCTGCAAGGGGGACGGCCCTTGTTACACCTGTGCTTGAAAGGCACTAAATTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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3UTR-3UTR TCA 90 bp | TCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATAGCCTCTTTTGGCACTaGCCTGGGCTTGGGTTTCAA | + |
Preference number: 2 (lower is better) Translates to: SCAVRSPQPVVWLWVYFYSLFWH*PGLGFQ Trigger: TTGAAACCCAAGCCCAGGTCAGTGCCAAAAGAGGCT...ATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR-3UTR GCA 90 bp | CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGCAAGGCAGTGGTCAGTaGAGACCAAGTGCAGGCTGC | + |
Preference number: 2 (lower is better) Translates to: LPSYLLVCRCLSMGCSPLQGSGQ*RPSAGC Trigger: GCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTG...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR-3UTR GCA 90 bp | GGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTGAGAACATTGCGCAGTaGTCAAGTCAAGAAATAGCT | + |
Preference number: 2 (lower is better) Translates to: GMLSLGTEQPSTRKTRDVENIAQ*SSQEIA Trigger: AGCTATTTCTTGACTTGAGCACTGCGCAATGTTCTC...AACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR-3UTR GCA 90 bp | GAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGA | + |
Preference number: 2 (lower is better) Translates to: ESLGIVPMLLGHTREPGKSSLAS*LNKEPG Trigger: TCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA...CTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR CAA 90 bp | TCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTaGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTAAGC | + |
Preference number: 2 (lower is better) Translates to: SYLLVCRCLSMGCSP*EQNSRPLGRPGTLS Trigger: GCTTAACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR-3UTR GCA 90 bp | CACTCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCGTATGATGCCTAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT | + |
Preference number: 2 (lower is better) Translates to: HSIAPPLKAALVHCRMMPNASTG*PRLSCA Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...AGGCATCATACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR-3UTR CCA 90 bp | ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGGCCCACATTCTGTCATaGAACTGGAAAGATTGGTGT | + |
Preference number: 2 (lower is better) Translates to: MSVYGMLSLGTEQPSTRKAHILS*NWKDWC Trigger: ACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR CAA 90 bp | GCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGCTaGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGC | + |
Preference number: 2 (lower is better) Translates to: ALFLCYLVILESQAS*NNEGAGESSSSLAS Trigger: GCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR-3UTR GCA 90 bp | AATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGAATAAGAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT | + |
Preference number: 2 (lower is better) Translates to: NNEGAGESSSSLASCLNKNASTG*PRLSCA Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...CTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152653.8 |
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3UTR-3UTR TCA 90 bp | TATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAAGAGCCAGGCAAGCTTaGATAATGAAGGTGCAGGTG | + |
Preference number: 2 (lower is better) Translates to: YLESLGIVPMLLGHTREPRARQA*IMKVQV Trigger: CACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCT...TGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR-3UTR GCA 90 bp | CAATGCGCTAGTATTTATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGA | + |
Preference number: 2 (lower is better) Translates to: QCASIYLESLGIVPMLLGSSLAS*LNKEPG Trigger: TCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA...ACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATAAATACTAGCGCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR-3UTR TCA 90 bp | TGCGCTAGTATTTATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATAGAGCCAGGCAAGCTTaGATAATGAAGGTGCAGGTG | + |
Preference number: 2 (lower is better) Translates to: CASIYLESLGIVPMLLGHRARQA*IMKVQV Trigger: CACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCT...ATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATAAATACTAGCGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR-3UTR CCA 90 bp | TCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATCGTATGATGCCTAATTaGTTGGTTATTTCTAAAAGC | + |
Preference number: 2 (lower is better) Translates to: SCAVRSPQPVVWLWVYFYRMMPN*LVISKS Trigger: GCTTTTAGAAATAACCAACCAATTAGGCATCATACG...ATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR GCA 72 bp | AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTaGCTGCTAACACCTAGGGCACCCCAGCCCTGCCGG | + |
Preference number: 3 (lower is better) Translates to: SQGSGQCRPSAG*LLTPRAPQPCR Trigger: CCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR GCA 72 bp | TCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATaGGTCGTCGGGTCACCTACTCTGGAGAGTGCCGGG | + |
Preference number: 3 (lower is better) Translates to: SSLASCLNKEPG*VVGSPTLESAG Trigger: CCCGGCACTCTCCAGAGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR TCA 72 bp | GTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTaGATAAGGAGCCAGGATGCGTCGTCGGGTCACCTA | + |
Preference number: 3 (lower is better) Translates to: VQVSRLPRLQAA*IRSQDASSGHL Trigger: TAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR GCA 72 bp | GAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCA | + |
Preference number: 3 (lower is better) Translates to: EGAGESSSSLAS*LNKEPGCVVGS Trigger: TGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR GCA 72 bp | TCGCCCTACAGGATACAAGAGGCCATCTCTATCGTGTaGTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTG | + |
Preference number: 3 (lower is better) Translates to: SPYRIQEAISIV*CAVSTACGLAL Trigger: CAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCTCTTGTATCCTGTAGGGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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3UTR CCA 72 bp | GGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATaGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGA | + |
Preference number: 3 (lower is better) Translates to: GTPALPGAHILS*NWKDWCGVETG Trigger: TCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR CCA 72 bp | CCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTaGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGAG | + |
Preference number: 3 (lower is better) Translates to: PALPGAHILSWN*KDWCGVETGAE Trigger: CTCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR CCA 72 bp | GCGTGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTaGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAG | + |
Preference number: 3 (lower is better) Translates to: AWPGFAHSLFPD*EGTLLFTCGWE Trigger: CTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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3UTR GCA 72 bp | CTACAGGATACAAGAGGCCATCTCTATCGTGTGCTGTaGGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTAT | + |
Preference number: 3 (lower is better) Translates to: LQDTRGHLYRVL*GLHSLWSGSGY Trigger: ATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCTCTTGTATCCTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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3UTR CCA 72 bp | TTGGAAGAACCACGAGAGCCTCTTTTGGCACTGACCTaGGCTTGGGTTTCAACGCTTCTACTGGTTGCCCTC | + |
Preference number: 3 (lower is better) Translates to: LEEPREPLLALT*AWVSTLLLVAL Trigger: GAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCCAAAAGAGGCTCTCGTGGTTCTTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR-3UTR CAA 90 bp | AACCCTGTACACTCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCGTGGCACTGACCTGGGCTaGGGTTTCAACGCTTCTACT | + |
Preference number: 3 (lower is better) Translates to: NPVHSIAPPLKAALVHCRGTDLG*GFNAST Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCC...ACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR TCA 72 bp | GCCCTCGAGTTAATGTTAAAAGTTAGCATCACCTGGTaGGAGGGCGTGGCCAGGCTTTGCCCATTCCTTGTT | + |
Preference number: 3 (lower is better) Translates to: ALELMLKVSITW*EGVARLCPFLV Trigger: AACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAGGTGATGCTAACTTTTAACATTAACTCGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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3UTR-3UTR CAA 90 bp | GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACAATGATGCCTAATTGGTaGGTTATTTCTAAAAGCTGG | + |
Preference number: 3 (lower is better) Translates to: GRSTFLPISHPTKGTGETMMPNW*VISKSW Trigger: CCAGCTTTTAGAAATAACCAACCAATTAGGCATCAT...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR GCA 72 bp | TATGAGCTCCAGCTAGTGAAACCCTGTACACTCTATTaGGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCG | + |
Preference number: 3 (lower is better) Translates to: YELQLVKPCTLY*AAIKSSLSALP Trigger: CGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGGTTTCACTAGCTGGAGCTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR CCA 72 bp | CATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTaGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTA | + |
Preference number: 3 (lower is better) Translates to: HLYRVLCGLHSL*SGSGYISILRL Trigger: TAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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3UTR-3UTR CAA 90 bp | TCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCATGGAACTGGAAAGATaGGTGTGGTGTAGAAACAGG | + |
Preference number: 3 (lower is better) Translates to: SYFLLVCTPDAIENIAQCMELER*VWCRNR Trigger: CCTGTTTCTACACCACACCAATCTTTCCAGTTCCAT...GCACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR TCA 72 bp | TATTTTGAGGCTATTTGCTCAACTGGCATCTTTCTATaGGCTCCAGCTAGTGAAACCCTGTACACTCTATTG | + |
Preference number: 3 (lower is better) Translates to: YFEAICSTGIFL*APASETLYTLL Trigger: CAATAGAGTGTACAGGGTTTCACTAGCTGGAGCTCATAGAAAGATGCCAGTTGAGCAAATAGCCTCAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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3UTR GCA 72 bp | TCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTaGCGTATGATGCCTAATTGGTTGGTTATTTCTAAA | + |
Preference number: 3 (lower is better) Translates to: SIAPPLKAALVH*RMMPNWLVISK Trigger: TTTAGAAATAACCAACCAATTAGGCATCATACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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CDS-3UTR TCA 90 bp | GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTGGCAGTGGCCAGGACTaGGCCGGCATCCCTGAGAAG | + |
Preference number: 4 (lower is better) Translates to: GCLLTPRAPQPCRGPTFCGSGQD*AGIPEK Trigger: CTTCTCAGGGATGCCGGCTCAGTCCTGGCCACTGCC...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCCCAATTGGTGGCAGTaGCCAGGACTGAGCCGGCAT | + |
Preference number: 4 (lower is better) Translates to: GCLLTPRAPQPCRGPTFCPNWWQ*PGLSRH Trigger: ATGCCGGCTCAGTCCTGGCCACTGCCACCAATTGGG...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTGGCCATGAAGAGGACTaGGTGCAGCTTGGTGCTGTG | + |
Preference number: 4 (lower is better) Translates to: GCLLTPRAPQPCRGPTFCGHEED*VQLGAV Trigger: CACAGCACCAAGCTGCACGCAGTCCTCTTCATGGCC...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | TGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATTTCTCCAGAAGCCGCTaGCACACCACCTCCCAGCTG | + |
Preference number: 4 (lower is better) Translates to: CLLTPRAPQPCRGPTFCHFSRSR*HTTSQL Trigger: CAGCTGGGAGGTGGTGTGTCAGCGGCTTCTGGAGAA...ATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | TGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATTCTCGAAGAGCGCGTTaGGATCGCGCAGATCCAGCC | + |
Preference number: 4 (lower is better) Translates to: CLLTPRAPQPCRGPTFCHSRRAR*DRADPA Trigger: GGCTGGATCTGCGCGATCCCAACGCGCTCTTCGAGA...ATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGATCTCGGCTCGGACCTaGCGCTCCAGCCCGCGGATC | + |
Preference number: 4 (lower is better) Translates to: SQGSGQCRPSAGCLLTPRISART*RSSPRI Trigger: GATCCGCGGGCTGGAGCGCCAGGTCCGAGCCGAGAT...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGCGCATCTGGCCGATaGTGTCCGCCGCCTCGATCA | + |
Preference number: 4 (lower is better) Translates to: RAPQPCRGPTFCHGTGKIGASGR*CPPPRS Trigger: TGATCGAGGCGGCGGACACCATCGGCCAGATGCGCC...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | CTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAAAGTCTGTGAGGGCTTaGCGCGGAGAGCTCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: LLTPRAPQPCRGPTFCHGKSVRA*RGELSS Trigger: GGAGGAGAGCTCTCCGCGCCAAGCCCTCACAGACTT...TCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCAGCTGCAGCAGGCTATaGAGGTGGCAGCAGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: APCGAHSQGSGQCRPSAGSCSRL*RWQQSR Trigger: CCTGCTCTGCTGCCACCTGCATAGCCTGCTGCAGCT...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTTCGATGTGGAGTTGTTaGTCTCCAGCTCCTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: GCLLTPRAPQPCRGPTFCSMWSC*SPAPAE Trigger: CTCTGCAGGAGCTGGAGACCAACAACTCCACATCGA...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCCCCATATGGCGTCTCTaGTGCCTGCCAGACCCTTCA | + |
Preference number: 4 (lower is better) Translates to: APCGAHSQGSGQCRPSAGPIWRL*CLPDPS Trigger: TGAAGGGTCTGGCAGGCATCAGAGACGCCATATGGG...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTGTAGAAAAGGGCATGTaGCTGGTTCAGAGTGGTAGC | + |
Preference number: 4 (lower is better) Translates to: GCLLTPRAPQPCRGPTFCVEKGM*LVQSGS Trigger: GCTACCACTCTGAACCAGGCACATGCCCTTTTCTAC...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTTTGACCGGAAGTGGCTaGCTGCTGCCACCTGGCGGA | + |
Preference number: 4 (lower is better) Translates to: GMLSLGTEQPSTRKTRDVLTGSG*LLPPGG Trigger: TCCGCCAGGTGGCAGCAGCCAGCCACTTCCGGTCAA...AACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCATAGTTGACCGGAAGTaGCTGGCTGCTGCCACCTGG | + |
Preference number: 4 (lower is better) Translates to: APCGAHSQGSGQCRPSAGIVDRK*LAAATW Trigger: CCAGGTGGCAGCAGCCAGCCACTTCCGGTCAACTAT...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GGAGGGCGGGGCCAGACAGCACAGGGCACTGGGTGCTTTTGCTCGGAGACTGGCAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: GGRGQTAQGTGCFCSETGSGSML*GSWELK Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...GCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGCTGTCTGGCCCCGCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR TCA 90 bp | GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCACACACTGCTTTAGGTaGGGGCACAGCTCTCCCAGA | + |
Preference number: 4 (lower is better) Translates to: APCGAHSQGSGQCRPSAGTHCFR*GHSSPR Trigger: TCTGGGAGAGCTGTGCCCTCACCTAAAGCAGTGTGT...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCT | + |
Preference number: 4 (lower is better) Translates to: GHLYRVLCGLHSLWSGSGFWSLP*SGHSSP Trigger: AGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAA...CCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR GCA 90 bp | GGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT | + |
Preference number: 4 (lower is better) Translates to: GHLYRVLCGLHSLWSGSGLHSGV*LAPATL Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...CCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR GCA 90 bp | GAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGCACAGGCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT | + |
Preference number: 4 (lower is better) Translates to: EGTLLFTCGWEGGARQHRLHSGV*LAPATL Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...CCTGTGCTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR TCA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGAGGTGGGCAGGTGTCTaGACCAGCTGCATAGCTTCA | + |
Preference number: 4 (lower is better) Translates to: PSPAGGPHSVMELERLVWRWAGV*TSCIAS Trigger: TGAAGCTATGCAGCTGGTTCAGACACCTGCCCACCT...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTCCCTTTCCAGTGGGATaGTGCCTTGTGACTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: RAPQPCRGPTFCHGTGKIPFPVG*CLVTVS Trigger: GGAGACAGTCACAAGGCAGCATCCCACTGGAAAGGG...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGGGCGTCTCTGATGCCTaGCAGACCCTTCATGCTCTT | + |
Preference number: 4 (lower is better) Translates to: PSPAGGPHSVMELERLVWGVSDA*QTLHAL Trigger: AAGAGCATGAAGGGTCTGGCAGGCATCAGAGACGCC...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTTTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCT | + |
Preference number: 4 (lower is better) Translates to: RAPQPCRGPTFCHGTGKIFWSLP*SGHSSP Trigger: AGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAA...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT | + |
Preference number: 4 (lower is better) Translates to: PSPAGGPHSVMELERLVWLHSGV*LAPATL Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCGTTCGGAGTGTGGGCTaGAACTCGATAATGGAGGTG | + |
Preference number: 4 (lower is better) Translates to: APCGAHSQGSGQCRPSAGVRSVG*NSIMEV Trigger: CACCTCCATTATCGAGTTCCAGCCCACACTCCGAAC...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGGCAGAGTTCTTAGGCTaGTGCGTGGGGGTGGTATCC | + |
Preference number: 4 (lower is better) Translates to: SQGSGQCRPSAGCLLTPRAEFLG*CVGVVS Trigger: GGATACCACCCCCACGCACCAGCCTAAGAACTCTGC...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGTTCATCCCAATTGGTaGCAGTGGCCAGGACTGAGC | + |
Preference number: 4 (lower is better) Translates to: RAPQPCRGPTFCHGTGKIVHPNW*QWPGLS Trigger: GCTCAGTCCTGGCCACTGCCACCAATTGGGATGAAC...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | TCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGTCATCTTCTCCATTCTaGAGTCTGCCTTGCTCCGGC | + |
Preference number: 4 (lower is better) Translates to: SRLGRNLAFHLWLGGRGQSSSPF*SLPCSG Trigger: GCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGA...CTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR GCA 90 bp | AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTTTTCCAGTGGGATGCTaGCTTGTGACTGTCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: RAPQPCRGPTFCHGTGKIFPVGC*LVTVSR Trigger: CCTGGAGACAGTCACAAGGCAGCATCCCACTGGAAA...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTTGGTCTCCAGCTCCTaGAGAGCTGAGACTAGAAGC | + |
Preference number: 4 (lower is better) Translates to: PSPAGGPHSVMELERLVWLVSSS*RAETRS Trigger: GCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAA...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | ATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGGAGTTCTTAGGCTGGTaGGTGGGGGTGGTATCCTTG | + |
Preference number: 4 (lower is better) Translates to: MGCSPLEQNSRPLGRPGTEFLGW*VGVVSL Trigger: CAAGGATACCACCCCCACGCACCAGCCTAAGAACTC...CGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GGCTGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCTGGGTCATTGGAAATaGCCCTTCTTTCTTTATCTG | + |
Preference number: 4 (lower is better) Translates to: GCLLTPRAPQPCRGPTFCLGHWK*PFFLYL Trigger: CAGATAAAGAAAGAAGGGGCATTTCCAATGACCCAG...ACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACATTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCT | + |
Preference number: 4 (lower is better) Translates to: GRSTFLPISHPTKGTGETFWSLP*SGHSSP Trigger: AGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAA...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR GCA 90 bp | CTGGTGAGAGGGCGTGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTGGGAAGTTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCT | + |
Preference number: 4 (lower is better) Translates to: LVRGRGQALPIPCFQTGKFWSLP*SGHSSP Trigger: AGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAA...CTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR GCA 90 bp | TCGTCTTCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT | + |
Preference number: 4 (lower is better) Translates to: SSSSLASCLNKEPGCVVGLHSGV*LAPATL Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...CCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152653.8 |
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CDS-3UTR CCA 90 bp | TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTGCGCAGCGGCGCATCTaGCCGATGGTGTCCGCCGCC | + |
Preference number: 4 (lower is better) Translates to: YRKLDSVALKLTAVLPLSAQRRI*PMVSAA Trigger: GGCGGCGGACACCATCGGCCAGATGCGCCGCTGCGC...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGCTGGCTGCTGCCACCTaGCGGATGAGGATTGGAAAT | + |
Preference number: 4 (lower is better) Translates to: SQGSGQCRPSAGCLLTPRLAAAT*RMRIGN Trigger: ATTTCCAATCCTCATCCGCCAGGTGGCAGCAGCCAG...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGGTCCGACACAGCCTaGCATTTGAGCAGCATCTTG | + |
Preference number: 4 (lower is better) Translates to: PSPAGGPHSVMELERLVWWSDTA*HLSSIL Trigger: CAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCA...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGCACAGGATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: EGTLLFTCGWEGGARQHRMLWGS*ELKVLL Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...CCTGTGCTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR TCA 90 bp | GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAAGGCGGGCGCAGTATTaGTCGGTGGCCTGCACGGCG | + |
Preference number: 4 (lower is better) Translates to: AHILSWNWKDWCGVETGARRAQY*SVACTA Trigger: CGCCGTGCAGGCCACCGATCAATACTGCGCCCGCCT...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACGGCAGAGTCTGGCCATaGAGAGGACTGCGTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: AGGPHSVMELERLVWCRNGRVWP*RGLRAA Trigger: AGCTGCACGCAGTCCTCTTCATGGCCAGACTCTGCC...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | TTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCATCTCCTGTAGGGTaGCCTTTGGCAAAGCATGGC | + |
Preference number: 4 (lower is better) Translates to: LFPDWEGTLLFTCGWEGGASPVG*PLAKHG Trigger: GCCATGCTTTGCCAAAGGTCACCCTACAGGAGATGC...CCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR GCA 90 bp | TGCCTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATATGTCGATCCATTTCTaGAGCGTGTCTTTCAGGTAC | + |
Preference number: 4 (lower is better) Translates to: CLLTPRAPQPCRGPTFCHMSIHF*SVSFRY Trigger: GTACCTGAAAGACACGCTGCAGAAATGGATCGACAT...ATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGACTTCCTTCACTCCCTaGCACTGGGCCTGCGCGGGG | + |
Preference number: 4 (lower is better) Translates to: LPSYLLVCRCLSMGCSPLTSFTP*HWACAG Trigger: CCCCGCGCAGGCCCAGTGGCAGGGAGTGAAGGAAGT...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG | + |
Preference number: 4 (lower is better) Translates to: VSRLGRNLAFHLWLGGRGRLLLR*GVKTSR Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...GCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR GCA 90 bp | GGGGCCAGACAGCACAGGGCACTGGGTGCTTTTGCTCGGAGACTGGCGATGCAGTTCTTGTGCTTGTCATaGTCAGTGGAAGGAGTCCAA | + |
Preference number: 4 (lower is better) Translates to: GARQHRALGAFARRLAMQFLCLS*SVEGVQ Trigger: TTGGACTCCTTCCACTGAGCATGACAAGCACAAGAA...CTGCATCGCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGCTGTCTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR GCA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGCCCTCGCCTTTCTTGTaGTTGTCATGCTCAGTGGAA | + |
Preference number: 4 (lower is better) Translates to: PSPAGGPHSVMELERLVWPSPFL*LSCSVE Trigger: TTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGG...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT | + |
Preference number: 4 (lower is better) Translates to: PSPAGGPHSVMELERLVWNASTG*PRLSCA Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GCTGGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT | + |
Preference number: 4 (lower is better) Translates to: AGRSTFLPISHPTKGTGENASTG*PRLSCA Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...CTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | GCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: AISIVCCAVSTACGLALGMLWGS*ELKVLL Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...ACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | GTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCCCCATTTCCTCTTGTaGAACTGGGCTTGGGTTTCA | + |
Preference number: 4 (lower is better) Translates to: VSRLGRNLAFHLWLGGRGPHFLL*NWAWVS Trigger: TGAAACCCAAGCCCAGTTCCACAAGAGGAAATGGGG...GCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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3UTR CAA 72 bp | TTTGCCCATTCCTTGTTTCCAGACTGGGAAGGAACCTaGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGA | + |
Preference number: 4 (lower is better) Translates to: FAHSLFPDWEGT*LFTCGWEGGAR Trigger: TCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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3UTR CAA 72 bp | CCTGGTGAGAGGGCGTGGCCAGGCTTTGCCCATTCCTaGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACC | + |
Preference number: 4 (lower is better) Translates to: PGERAWPGFAHS*FPDWEGTLLFT Trigger: GGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR TCA 90 bp | AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGTGCAGCTTGGTGCTGTaGAGGACATCCTTTTGTTCC | + |
Preference number: 4 (lower is better) Translates to: SQGSGQCRPSAGCLLTPRCSLVL*RTSFCS Trigger: GGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCA...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | CTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACC | + |
Preference number: 4 (lower is better) Translates to: LYRVLCGLHSLWSGSGYILREAN*FSVPVT Trigger: GGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAG...AATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR GCA 90 bp | GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACCTGGCTGATGGGATGTaGGAGAGTTCGGAGTGTGGG | + |
Preference number: 4 (lower is better) Translates to: AGGPHSVMELERLVWCRNLADGM*ESSECG Trigger: CCCACACTCCGAACTCTCGCACATCCCATCAGCCAG...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | TCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATCTCCATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT | + |
Preference number: 4 (lower is better) Translates to: SLSCAVRSPQPVVWLWVYLHSGV*LAPATL Trigger: AAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAG...ATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR GCA 90 bp | CCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTAAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG | + |
Preference number: 4 (lower is better) Translates to: PSLSCAVRSPQPVVWLWVRLLLR*GVKTSR Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...TACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR GCA 90 bp | CTGGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACCCTCGCCTTTCTTGTaGTTGTCATGCTCAGTGGAA | + |
Preference number: 4 (lower is better) Translates to: LAEARFSPSPTQLKAQGRPSPFL*LSCSVE Trigger: TTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGG...TCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR GCA 90 bp | CTGGTGAGAGGGCGTGGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTGGGAAGAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT | + |
Preference number: 4 (lower is better) Translates to: LVRGRGQALPIPCFQTGKNASTG*PRLSCA Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...CTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCCACGCCCTCTCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR GCA 90 bp | CTGGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACCCTGTACACTCTATTaGGCCGCCATTAAAAGCAGC | + |
Preference number: 4 (lower is better) Translates to: LAEARFSPSPTQLKAQGRPCTLY*AAIKSS Trigger: GCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGG...TCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | CTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAATTCAAAGCCTTCTCTaGTCAGTGTCTGTAACCGAT | + |
Preference number: 4 (lower is better) Translates to: LLTPRAPQPCRGPTFCHGIQSLL*SVSVTD Trigger: ATCGGTTACAGACACTGACCAGAGAAGGCTTTGAAT...TCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACAATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: GRSTFLPISHPTKGTGETMLWGS*ELKVLL Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | TCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: SSLASCLNKEPGCVVGSPMLWGS*ELKVLL Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...AGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR CCA 90 bp | CCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTAAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: PSLSCAVRSPQPVVWLWVSGSML*GSWELK Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...TACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | AGGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGAT | + |
Preference number: 4 (lower is better) Translates to: RPSLSCAVRSPQPVVWLWACHAQ*KESKPD Trigger: ATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGC...CCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR TCA 90 bp | GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACGCATCTCCTGTAGGGTaGCCTTTGGCAAAGCATGGC | + |
Preference number: 4 (lower is better) Translates to: AGGPHSVMELERLVWCRNASPVG*PLAKHG Trigger: GCCATGCTTTGCCAAAGGTCACCCTACAGGAGATGC...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | TCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATAGCCTCTTTTGGCACTaGCCTGGGCTTGGGTTTCAA | + |
Preference number: 4 (lower is better) Translates to: SLSCAVRSPQPVVWLWVYSLFWH*PGLGFQ Trigger: TTGAAACCCAAGCCCAGGTCAGTGCCAAAAGAGGCT...ATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR GCA 90 bp | ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGTTAGAGGAGTCCAGCTaGAGCAGGCTATGCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: MSVYGMLSLGTEQPSTRKLEESS*SRLCRW Trigger: CCACCTGCATAGCCTGCTGCAGCTGGACTCCTCTAA...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CTGCTAACACCTAGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAAAGAAAGACATGTTCTaGTCAAAGTGGACATGCTTG | + |
Preference number: 4 (lower is better) Translates to: LLTPRAPQPCRGPTFCHGKKDMF*SKWTCL Trigger: CAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTT...TCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCTAGGTGTTAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | TTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGCCCTCGCCTTTCTTGTaGTTGTCATGCTCAGTGGAA | + |
Preference number: 4 (lower is better) Translates to: LFPDWEGTLLFTCGWEGGPSPFL*LSCSVE Trigger: TTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGG...CCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR GCA 90 bp | AGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACTCTGGAGAGTAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCT | + |
Preference number: 4 (lower is better) Translates to: SCLNKEPGCVVGSPTLESNASTG*PRLSCA Trigger: AGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTT...ACTCTCCAGAGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS-3UTR CCA 90 bp | AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGCATGCTTGTTCGATGTaGAGTTGTTGGTCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: SQGSGQCRPSAGCLLTPRHACSM*SCWSPA Trigger: AGCTGGAGACCAACAACTCCACATCGAACAAGCATG...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGCACGGGCTAATGGCTTaGGCTTTCATGGAGAGGCCA | + |
Preference number: 4 (lower is better) Translates to: MSVYGMLSLGTEQPSTRKHGLMA*AFMERP Trigger: TGGCCTCTCCATGAAAGCCCAAGCCATTAGCCCGTG...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGCTCTCCCAGAGACTaGCAGAGTCTGGCCATGAAG | + |
Preference number: 4 (lower is better) Translates to: AGGPHSVMELERLVWCRNSSPRD*QSLAMK Trigger: CTTCATGGCCAGACTCTGCCAGTCTCTGGGAGAGCT...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | AGGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGTCGGTTCTGGGTCATTaGAAATGCCCCTTCTTTCTT | + |
Preference number: 4 (lower is better) Translates to: RPSLSCAVRSPQPVVWLWSVLGH*KCPFFL Trigger: AAGAAAGAAGGGGCATTTCCAATGACCCAGAACCGA...CCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | ATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATCATCTTCTCCATTCTaGAGTCTGCCTTGCTCCGGC | + |
Preference number: 4 (lower is better) Translates to: ISIVCCAVSTACGLALGISSSPF*SLPCSG Trigger: GCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGA...TATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | TCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACTAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: SLASCLNKEPGCVVGSPTSGSML*GSWELK Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...AGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR CCA 90 bp | GCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGAGTCAGGGAGGGGTTaGAAGAACCACGAGAGCCTC | + |
Preference number: 4 (lower is better) Translates to: AVRSPQPVVWLWVYFYFEESGRG*KNHESL Trigger: GAGGCTCTCGTGGTTCTTCCAACCCCTCCCTGACTC...CTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR TCA 90 bp | CATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGCTCATAGGCAGCTATaGCTTGGGCCATGCAGGTCT | + |
Preference number: 4 (lower is better) Translates to: HSLFPDWEGTLLFTCGWEAHRQL*LGPCRS Trigger: AGACCTGCATGGCCCAAGTCATAGCTGCCTATGAGC...CTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR TCA 90 bp | AGCTTGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACC | + |
Preference number: 4 (lower is better) Translates to: SLNNEGAGESSSSLASCLLREAN*FSVPVT Trigger: GGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAG...CAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS-3UTR TCA 90 bp | AAGAATTTAGTGCCTTTCAAGCACAGGTGTAACAAGGGCCGTCCCCCTTGCAGCCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACC | + |
Preference number: 4 (lower is better) Translates to: KNLVPFKHRCNKGRPPCSLREAN*FSVPVT Trigger: GGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAG...GCTGCAAGGGGGACGGCCCTTGTTACACCTGTGCTTGAAAGGCACTAAATTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR GCA 90 bp | ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGTCCTCGCTTGCAAGCTaGCTGAATAAGGAGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: MSVYGMLSLGTEQPSTRKSSLAS*LNKEPG Trigger: TCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGCTGCGAGGCTTCCATaGCGCTCCAGATCTTCTCCG | + |
Preference number: 4 (lower is better) Translates to: AHILSWNWKDWCGVETGAAARLP*RSRSSP Trigger: CGGAGAAGATCTGGAGCGCCATGGAAGCCTCGCAGC...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGAGTGCACAGCTCTGCCTaGATGCAGCCCACGACGGAC | + |
Preference number: 4 (lower is better) Translates to: PHSVMELERLVWCRNRSRVHSSA*MQPTTD Trigger: GTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCAC...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGTCGGTTCTGGGTCATTaGAAATGCCCCTTCTTTCTT | + |
Preference number: 4 (lower is better) Translates to: SQGSGQCRPSAGCLLTPRSVLGH*KCPFFL Trigger: AAGAAAGAAGGGGCATTTCCAATGACCCAGAACCGA...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACATCGGTTCTGGGTCATTaGAAATGCCCCTTCTTTCTT | + |
Preference number: 4 (lower is better) Translates to: GRSTFLPISHPTKGTGETSVLGH*KCPFFL Trigger: AAGAAAGAAGGGGCATTTCCAATGACCCAGAACCGA...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | TCTTCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCAGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGAT | + |
Preference number: 4 (lower is better) Translates to: SSSLASCLNKEPGCVVGSACHAQ*KESKPD Trigger: ATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGC...TGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS-3UTR CCA 90 bp | TTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGAT | + |
Preference number: 4 (lower is better) Translates to: LFPDWEGTLLFTCGWEGGACHAQ*KESKPD Trigger: ATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGC...CCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR TCA 90 bp | ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCCAGCAGGAAGTCTGTaGGGGCTTGGCGCGGAGAGC | + |
Preference number: 4 (lower is better) Translates to: ILFSSSLYPRRYREHCAVPAGSL*GLGAES Trigger: GCTCTCCGCGCCAAGCCCTCACAGACTTCCTGCTGG...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | ATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGAGCATCTTGCTTTCGTaGAAAATAGTTGACCGGAAG | + |
Preference number: 4 (lower is better) Translates to: MGCSPLEQNSRPLGRPGTSILLS*KIVDRK Trigger: CTTCCGGTCAACTATTTTGCACGAAAGCAAGATGCT...CGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACCTGCGTGCAGCTTGGTaGTGTGAAGGACATCCTTTT | + |
Preference number: 4 (lower is better) Translates to: AGGPHSVMELERLVWCRNLRAAW*CEGHPF Trigger: AAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAG...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTCTGGGTCATTGGAAATaGCCCTTCTTTCTTTATCNN | + |
Preference number: 4 (lower is better) Translates to: AISIVCCAVSTACGLALGLGHWK*PFFLYX Trigger: NNGATAAAGAAAGAAGGGGCATTTCCAATGACCCAG...ACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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CDS-3UTR GCA 90 bp | CATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGGGCTTTGCAACACTaGCCCATTTCCTCTTGTGGA | + |
Preference number: 4 (lower is better) Translates to: HSLFPDWEGTLLFTCGWEGALQH*PISSCG Trigger: TCCACAAGAGGAAATGGGGCAGTGTTGCAAAGCCCC...CTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CCA 90 bp | TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTCAGAAGGCAGGTCGTTaGGGCTCTCGGACCAGAGGA | + |
Preference number: 4 (lower is better) Translates to: YRKLDSVALKLTAVLPLSQKAGR*GSRTRG Trigger: TCCTCTGGTCCGAGAGCCCCAACGACCTGCCTTCTG...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGCCTTCTTTCTTTATCTaGTTTTCCTCTGTGAGTTGC | + |
Preference number: 4 (lower is better) Translates to: PSPAGGPHSVMELERLVWPSFFI*FSSVSC Trigger: GCAACTCACAGAGGAAAACCAGATAAAGAAAGAAGG...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: MSVYGMLSLGTEQPSTRKSGSML*GSWELK Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACGAAGTGGCTGGCTGCTaGCACCTGGCGGATGAGGAT | + |
Preference number: 4 (lower is better) Translates to: YLLVCRCLSMGCSPLEQNEVAGC*HLADED Trigger: ATCCTCATCCGCCAGGTGGCAGCAGCCAGCCACTTC...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGAAATGGTGCACAGCTCTaGCTGGATGCAGCCCACGAC | + |
Preference number: 4 (lower is better) Translates to: PHSVMELERLVWCRNRSRNGAQL*LDAAHD Trigger: GTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATT...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGCTGGGTCATTGGAAATaGCCCTTCTTTCTTTATCTG | + |
Preference number: 4 (lower is better) Translates to: LVSRLGRNLAFHLWLGGRLGHWK*PFFLYL Trigger: CAGATAAAGAAAGAAGGGGCATTTCCAATGACCCAG...CCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CCA 90 bp | GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCACCTCCAAGAGCATTATaGAGCAGAGGGCTTCGGCCA | + |
Preference number: 4 (lower is better) Translates to: AHILSWNWKDWCGVETGAPPRAL*SRGLRP Trigger: TGGCCGAAGCCCTCTGCTCCATAATGCTCTTGGAGG...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGGAGCCCTCGCCTCCCTaGCAGGTTTCTCAGAACCCC | + |
Preference number: 4 (lower is better) Translates to: ILFSSSLYPRRYREHCAVEPSPP*QVSQNP Trigger: GGGGTTCTGAGAAACCTGCCAGGGAGGCGAGGGCTC...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | TTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGACCCGATTAACTTCCTaGCATAAGCTAAACAGGAAG | + |
Preference number: 4 (lower is better) Translates to: LFPDWEGTLLFTCGWEGGTRLTS*HKLNRK Trigger: CTTCCTGTTTAGCTTATGCCAGGAAGTTAATCGGGT...CCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CCA 90 bp | TTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCTCATCTTCTCCATTCTaGAGTCTGCCTTGCTCCGGC | + |
Preference number: 4 (lower is better) Translates to: LESLGIVPMLLGHTREPGSSSPF*SLPCSG Trigger: GCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGA...GCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152653.8 |
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CDS-3UTR CCA 90 bp | GAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: ESLGIVPMLLGHTREPGKMLWGS*ELKVLL Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...CTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR CCA 90 bp | AGCTTGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: SLNNEGAGESSSSLASCLSGSML*GSWELK Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...CAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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3UTR CAA 72 bp | TTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTaGGAACAGAACAGCCGTCCACTCGGAAGACCAGGG | + |
Preference number: 4 (lower is better) Translates to: LVCRCLSMGCSP*EQNSRPLGRPG Trigger: CCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCAGCAGATCCAGCCGCTTaGGCGCGGAGGAGGCGGTCG | + |
Preference number: 4 (lower is better) Translates to: GTLSTFPSCGLYFTFEFPADPAA*ARRRRS Trigger: CGACCGCCTCCTCCGCGCTCAAGCGGCTGGATCTGC...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACATCTCCTCCGCTCCATaGGTCTCGAAGAGCGCGTTG | + |
Preference number: 4 (lower is better) Translates to: YLLVCRCLSMGCSPLEQNISSAP*VSKSAL Trigger: CAACGCGCTCTTCGAGACTCATGGAGCGGAGGAGAT...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | TCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCAAACTGAGCCCGGTTTaGTACGCTGACCCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: SYFLLVCTPDAIENIAQCKLSPV*YADPGS Trigger: GCTGCCTGGGTCAGCGTAGCAAACCGGGCTCAGTTT...GCACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | TCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATCTGGGTCATTGGAAATaGCCCTTCTTTCTTTATCTG | + |
Preference number: 4 (lower is better) Translates to: SLSCAVRSPQPVVWLWVYLGHWK*PFFLYL Trigger: CAGATAAAGAAAGAAGGGGCATTTCCAATGACCCAG...ATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR GCA 90 bp | TTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG | + |
Preference number: 4 (lower is better) Translates to: LESLGIVPMLLGHTREPGRLLLR*GVKTSR Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...GCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR CCA 90 bp | ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCGCAGTATTGATCGGTaGCCTGCACGGCGTCCACCA | + |
Preference number: 4 (lower is better) Translates to: ILFSSSLYPRRYREHCAVRSIDR*PARRPP Trigger: TGGTGGACGCCGTGCAGGCCACCGATCAATACTGCG...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGATGTTATGGGGCTCCTaGGAGTTGAAAGTGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: LPSYLLVCRCLSMGCSPLMLWGS*ELKVLL Trigger: GAGCAGCACTTTCAACTCCCAGGAGCCCCATAACAT...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | CCATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGATTGTGGAACTGGGCTTaGGTTTCAACGCTTCTACTG | + |
Preference number: 4 (lower is better) Translates to: PFLVSRLGRNLAFHLWLGLWNWA*VSTLLL Trigger: CAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAA...TCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR TCA 90 bp | CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGTCTGGTTTTCCTCTGTaGGTTGCTCATAGGCAGCTA | + |
Preference number: 4 (lower is better) Translates to: LPSYLLVCRCLSMGCSPLSGFPL*VAHRQL Trigger: TAGCTGCCTATGAGCAACTCACAGAGGAAAACCAGA...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | GAAAAGAATTTAGTGCCTTTCAAGCACAGGTGTAACAAGGGCCGTCCCCCTTGCTCTGGTTTTCCTCTGTaGGTTGCTCATAGGCAGCTA | + |
Preference number: 4 (lower is better) Translates to: EKNLVPFKHRCNKGRPPCSGFPL*VAHRQL Trigger: TAGCTGCCTATGAGCAACTCACAGAGGAAAACCAGA...GCAAGGGGGACGGCCCTTGTTACACCTGTGCTTGAAAGGCACTAAATTCTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR TCA 90 bp | TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACC | + |
Preference number: 4 (lower is better) Translates to: YLLVCRCLSMGCSPLEQNLREAN*FSVPVT Trigger: GGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAG...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTCACGGTCCCAGCATCTaGGTATCGATCAAAGGCAGA | + |
Preference number: 4 (lower is better) Translates to: YRKLDSVALKLTAVLPLSHGPSI*VSIKGR Trigger: TCTGCCTTTGATCGATACGCAGATGCTGGGACCGTG...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTATTAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG | + |
Preference number: 4 (lower is better) Translates to: RSPQPVVWLWVYFYFEAIRLLLR*GVKTSR Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...AATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | TTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCTTCGGCCACAGCCTaGTCCGACACAGCCTGGCAT | + |
Preference number: 4 (lower is better) Translates to: FHILFSSSLYPRRYREHCASATA*SDTAWH Trigger: ATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGC...GCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCATCTTTCAGGTACTCCTaGCTGATGGGATGTGCGAGA | + |
Preference number: 4 (lower is better) Translates to: AHILSWNWKDWCGVETGASFRYS*LMGCAR Trigger: TCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGA...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGCAGAACAGAAGTTCTaGACACACGGGCTAATGGCT | + |
Preference number: 4 (lower is better) Translates to: AHILSWNWKDWCGVETGAAEQKF*THGLMA Trigger: AGCCATTAGCCCGTGTGTCCAGAACTTCTGTTCTGC...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | ATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGTCGGTTCTGGGTCATTaGAAATGCCCCTTCTTTCTT | + |
Preference number: 4 (lower is better) Translates to: IPCFQTGKEPCFSPVAGRSVLGH*KCPFFL Trigger: AAGAAAGAAGGGGCATTTCCAATGACCCAGAACCGA...CCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CCA 90 bp | CGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTATTAGCGGCAGTATGTTATaGGGCTCCTGGGAGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: RSPQPVVWLWVYFYFEAISGSML*GSWELK Trigger: TTTCAACTCCCAGGAGCCCCATAACATACTGCCGCT...AATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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3UTR CAA 72 bp | CTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGCTaGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCG | + |
Preference number: 4 (lower is better) Translates to: LCYLVILESQAS*NNEGAGESSSS Trigger: CGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR GCA 90 bp | TTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCTTCTTGTGCTTGTCATaGTCAGTGGAAGGAGTCCAA | + |
Preference number: 4 (lower is better) Translates to: LESLGIVPMLLGHTREPGFLCLS*SVEGVQ Trigger: TTGGACTCCTTCCACTGAGCATGACAAGCACAAGAA...GCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS-3UTR CCA 90 bp | TCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCAAAAGGGCATGTGCCTaGTTCAGAGTGGTAGCCAGC | + |
Preference number: 4 (lower is better) Translates to: SYFLLVCTPDAIENIAQCKRACA*FRVVAS Trigger: GCTGGCTACCACTCTGAACCAGGCACATGCCCTTTT...GCACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGGCAATGGTGTGTCACTaGAGGGAAGGTAGGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: ILFSSSLYPRRYREHCAVAMVCH*REGRPG Trigger: TCCTGGCCTACCTTCCCTCCAGTGACACACCATTGC...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTGGTATCCTTGAGCAATaGTGTGTCACTGGAGGGAAG | + |
Preference number: 4 (lower is better) Translates to: YRKLDSVALKLTAVLPLSGILEQ*CVTGGK Trigger: CTTCCCTCCAGTGACACACCATTGCTCAAGGATACC...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACTCATCTTCTCCATTCTaGAGTCTGCCTTGCTCCGGC | + |
Preference number: 4 (lower is better) Translates to: YLLVCRCLSMGCSPLEQNSSSPF*SLPCSG Trigger: GCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGA...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGAT | + |
Preference number: 4 (lower is better) Translates to: AHILSWNWKDWCGVETGAACHAQ*KESKPD Trigger: ATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGC...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | GGAGAATATCACTTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATCCACTACTGGCAAACTaGGCCCGGTTTGCTACGCTG | + |
Preference number: 4 (lower is better) Translates to: GEYHFHILFSSSLYPRRYPLLAN*ARFATL Trigger: CAGCGTAGCAAACCGGGCTCAGTTTGCCAGTAGTGG...ATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAAGTGATATTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | TCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGCAGAGCCAGGCAAGCTTaGATAATGAAGGTGCAGGTG | + |
Preference number: 4 (lower is better) Translates to: SYFLLVCTPDAIENIAQCRARQA*IMKVQV Trigger: CACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCT...GCACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | CGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTATTTTCTTGTGCTTGTCATaGTCAGTGGAAGGAGTCCAA | + |
Preference number: 4 (lower is better) Translates to: RSPQPVVWLWVYFYFEAIFLCLS*SVEGVQ Trigger: TTGGACTCCTTCCACTGAGCATGACAAGCACAAGAA...AATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR CCA 90 bp | CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGATGGAGCTGTTGGAGATaGATTCAAAGCCTTCTCTGG | + |
Preference number: 4 (lower is better) Translates to: PHSVMELERLVWCRNRSRWSCWR*IQSLLW Trigger: CCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCA...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | CTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTCGTATGATGCCTAATTaGTTGGTTATTTCTAAAAGC | + |
Preference number: 4 (lower is better) Translates to: LYRVLCGLHSLWSGSGYIRMMPN*LVISKS Trigger: GCTTTTAGAAATAACCAACCAATTAGGCATCATACG...AATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR TCA 90 bp | GGAGAATATCACTTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATACATACCAGGAGGGCTaGGTAGGGAGGCGGATCTTA | + |
Preference number: 4 (lower is better) Translates to: GEYHFHILFSSSLYPRRYTYQEG*VGRRIL Trigger: TAAGATCCGCCTCCCTACTCAGCCCTCCTGGTATGT...ATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAAGTGATATTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGCTTGAATAATAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG | + |
Preference number: 4 (lower is better) Translates to: ALFLCYLVILESQASLNNRLLLR*GVKTSR Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...ATTATTCAAGCTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR GCA 90 bp | CAATGCGCTAGTATTTATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCCCTCGCCTTTCTTGTaGTTGTCATGCTCAGTGGAA | + |
Preference number: 4 (lower is better) Translates to: QCASIYLESLGIVPMLLGPSPFL*LSCSVE Trigger: TTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGG...ACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATAAATACTAGCGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS-3UTR CCA 90 bp | GCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAATGTTCTGCTCAAAGTaGACATGCTTGTTCGATGTG | + |
Preference number: 4 (lower is better) Translates to: AHILSWNWKDWCGVETGAMFCSK*TCLFDV Trigger: CACATCGAACAAGCATGTCCACTTTGAGCAGAACAT...TGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | TTGCCCATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTCCTTCTTTCTTTATCTaGTTTTCCTCTGTGAGTTGC | + |
Preference number: 4 (lower is better) Translates to: LPIPCFQTGKEPCFSPVAPSFFI*FSSVSC Trigger: GCAACTCACAGAGGAAAACCAGATAAAGAAAGAAGG...AGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CCA 90 bp | TATAGGAAGCTTGACTCTGTTGCACTGAAGCTAACTGCCGTCCTACCTCTTAGTAGACTAGAAGCTCTTTaGAGCTGTTGGAGATGGATT | + |
Preference number: 4 (lower is better) Translates to: YRKLDSVALKLTAVLPLSRLEAL*SCWRWI Trigger: AATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCT...ACTAAGAGGTAGGACGGCAGTTAGCTTCAGTGCAACAGAGTCAAGCTTCCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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3UTR CAA 72 bp | CACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTaGAGGCTATTTGCTCAACTGGCATCTTTCTATGAG | + |
Preference number: 4 (lower is better) Translates to: HSLWSGSGYISI*RLFAQLASFYE Trigger: CTCATAGAAAGATGCCAGTTGAGCAAATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR TCA 90 bp | GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCAGCTCATAGGCAGCTATaGCTTGGGCCATGCAGGTCT | + |
Preference number: 4 (lower is better) Translates to: GTLSTFPSCGLYFTFEFPAHRQL*LGPCRS Trigger: AGACCTGCATGGCCCAAGTCATAGCTGCCTATGAGC...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | TTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGG | + |
Preference number: 4 (lower is better) Translates to: FHILFSSSLYPRRYREHCRLLLR*GVKTSR Trigger: CCTGGATGTCTTCACACCGCATCTCAACAGCAACCT...GCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR TCA 90 bp | GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCAACACAGCCTGGCATTTaGGCAGCATCTTGCTTTCGT | + |
Preference number: 4 (lower is better) Translates to: GTLSTFPSCGLYFTFEFPTQPGI*AASCFR Trigger: ACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGT...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | CATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAACCCGATTAACTTCCTaGCATAAGCTAAACAGGAAG | + |
Preference number: 4 (lower is better) Translates to: HILFSSSLYPRRYREHCATRLTS*HKLNRK Trigger: CTTCCTGTTTAGCTTATGCCAGGAAGTTAATCGGGT...TGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR GCA 90 bp | GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCATTCTTGTGCTTGTCATaGTCAGTGGAAGGAGTCCAA | + |
Preference number: 4 (lower is better) Translates to: GTLSTFPSCGLYFTFEFPFLCLS*SVEGVQ Trigger: TTGGACTCCTTCCACTGAGCATGACAAGCACAAGAA...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CCA 90 bp | GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCAGCTCTTTGGAGCTGTTaGAGATGGATTCAAAGCCTT | + |
Preference number: 4 (lower is better) Translates to: GTLSTFPSCGLYFTFEFPALWSC*RWIQSL Trigger: AAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGC...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | GCACGGCGTCCACCAGGCCCTCGGCGCAGCGGCGCATCTGGCCGATaGTGTCCGCCGCCTCGATCAGGTCGCGGTACCGCTCGCCCACCA | + |
Preference number: 5 (lower is better) Translates to: ARRPPGPRRSGASGR*CPPPRSGRGTARPP Trigger: TGGTGGGCGAGCGGTACCGCGACCTGATCGAGGCGGCGGACACCATCGGCCAGATGCGCCGCTGCGCCGAGGGCCTGGTGGACGCCGTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 |
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CDS TCA 90 bp | TCGGCTCGGACCTGGCGCTCCAGCCCGCGGATCTCCTCCGCTCCATaGGTCTCGAAGAGCGCGTTGGGATCGCGCAGATCCAGCCGCTTG | + |
Preference number: 5 (lower is better) Translates to: SARTWRSSPRISSAP*VSKSALGSRRSSRL Trigger: CAAGCGGCTGGATCTGCGCGATCCCAACGCGCTCTTCGAGACTCATGGAGCGGAGGAGATCCGCGGGCTGGAGCGCCAGGTCCGAGCCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 |
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CDS GCA 90 bp | GTGTCCGCCGCCTCGATCAGGTCGCGGTACCGCTCGCCCACCATCTaGCGCAGCTCCTCCTTCTTGTGTTCGATCTCGGCTCGGACCTGG | + |
Preference number: 5 (lower is better) Translates to: VSAASIRSRYRSPTI*RSSSFLCSISARTW Trigger: CCAGGTCCGAGCCGAGATCGAACACAAGAAGGAGGAGCTGCGGCAGATGGTGGGCGAGCGGTACCGCGACCTGATCGAGGCGGCGGACAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 |
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CDS-3UTR CAA 90 bp | GGAGGGCGGGGCCAGACAGCACAGGGCACTGGGTGCTTTTGCTCGGAGACTGGCATTCTGGAGTCTGCCTaGCTCCGGCCACTCTTCACC | + |
Preference number: 5 (lower is better) Translates to: GGRGQTAQGTGCFCSETGILESA*LRPLFT Trigger: GGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAAT...GCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGCTGTCTGGCCCCGCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CAA 90 bp | GCTCCTTGCGGTGCCCATAGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCGAAGTCTGTGAGGGCTaGGCGCGGAGAGCTCTCCTC | + |
Preference number: 5 (lower is better) Translates to: APCGAHSQGSGQCRPSAGEVCEG*ARRALL Trigger: GAGGAGAGCTCTCCGCGCCAAGCCCTCACAGACTTC...GCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCTATGGGCACCGCAAGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS TCA 90 bp | CTTCAATGGTGCACAGCTCTGCCTGGATGCAGCCCACGACGGACTTaGTGCAGGCCACGGACTGCGTACGCAGCATGTCCTGCACGGTCC | + |
Preference number: 5 (lower is better) Translates to: LQWCTALPGCSPRRT*CRPRTAYAACPARS Trigger: GGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | TCTGCCTGGATGCAGCCCACGACGGACTTGATGCAGGCCACGGACTaGGTACGCAGCATGTCCTGCACGGTCCCAGCATCTGCGTATCGA | + |
Preference number: 5 (lower is better) Translates to: SAWMQPTTDLMQATD*VRSMSCTVPASAYR Trigger: TCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | GCTGCAGCAGGCTATGCAGGTGGCAGCAGAGCAGGTAGAGCTGTGTaGCCTGGAGGTGCTGCGAGGCTTCCATGGCGCTCCAGATCTTCT | + |
Preference number: 5 (lower is better) Translates to: AAAGYAGGSRAGRAV*PGGAARLPWRSRSS Trigger: AGAAGATCTGGAGCGCCATGGAAGCCTCGCAGCACCTCCAGGCCACACAGCTCTACCTGCTCTGCTGCCACCTGCATAGCCTGCTGCAGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | GGCCACGGACTGCGTACGCAGCATGTCCTGCACGGTCCCAGCATCTaGGTATCGATCAAAGGCAGAGTTCTTAGGCTGGTGCGTGGGGGT | + |
Preference number: 5 (lower is better) Translates to: GHGLRTQHVLHGPSI*VSIKGRVLRLVRGG Trigger: ACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | GGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTTCAGAAGGCAGGTCGTaGGGGCTCTCGGACCAGAGG | + |
Preference number: 5 (lower is better) Translates to: GMLSLGTEQPSTRKTRDVSEGRS*GLSDQR Trigger: CCTCTGGTCCGAGAGCCCCAACGACCTGCCTTCTGA...AACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | GGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG | + |
Preference number: 5 (lower is better) Translates to: GHLYRVLCGLHSLWSGSGTRRLR*LLRCGV Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...CCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACATGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG | + |
Preference number: 5 (lower is better) Translates to: GRSTFLPISHPTKGTGETWGSWE*KVLLRE Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS TCA 90 bp | TGCATCAGGTCCTCCCAGAACAAGAGCGGCTTCTCCAGAAGCCGCTaGCACACCACCTCCCAGCTGTGGCTGGCAGACTCGTTGCTAAGC | + |
Preference number: 5 (lower is better) Translates to: CIRSSQNKSGFSRSR*HTTSQLWLADSLLS Trigger: GCTTAGCAACGAGTCTGCCAGCCACAGCTGGGAGGTGGTGTGTCAGCGGCTTCTGGAGAAGCCGCTCTTGTTCTGGGAGGACCTGATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG | + |
Preference number: 5 (lower is better) Translates to: RAPQPCRGPTFCHGTGKITRRLR*LLRCGV Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | GCGGGGCCAGACAGCACAGGGCACTGGGTGCTTTTGCTCGGAGACTGGCGATGCTCGCCTTTCTTGTGCTaGTCATGCTCAGTGGAAGGA | + |
Preference number: 5 (lower is better) Translates to: AGPDSTGHWVLLLGDWRCSPFLC*SCSVEG Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGA...GCATCGCCAGTCTCCGAGCAAAAGCACCCAGTGCCCTGTGCTGTCTGGCCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS CCA 90 bp | GAGGTGGGCAGGTGTCTGAACCAGCTGCATAGCTTCATCTCCCCTTaGAGGGCACCGATGCCCTTTCCAGTGGGATGCTGCCTTGTGACT | + |
Preference number: 5 (lower is better) Translates to: EVGRCLNQLHSFISP*RAPMPFPVGCCLVT Trigger: AGTCACAAGGCAGCATCCCACTGGAAAGGGCATCGGTGCCCTCCAAGGGGAGATGAAGCTATGCAGCTGGTTCAGACACCTGCCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGATTCTGGAGTCTGCCTaGCTCCGGCCACTCTTCACC | + |
Preference number: 5 (lower is better) Translates to: SQGSGQCRPSAGCLLTPRILESA*LRPLFT Trigger: GGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAAT...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | TCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG | + |
Preference number: 5 (lower is better) Translates to: SSLASCLNKEPGCVVGSPTRRLR*LLRCGV Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...AGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR CAA 90 bp | GACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGTTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTG | + |
Preference number: 5 (lower is better) Translates to: DWEGTLLFTCGWEGGARQLPSPF*CLSCSV Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAA...CTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS GCA 90 bp | TTCATCTCCCCTTGGAGGGCACCGATGCCCTTTCCAGTGGGATGCTaGCTTGTGACTGTCTCCAGGGTAGAAAAGAGCAAGCCACAGGGC | + |
Preference number: 5 (lower is better) Translates to: FISPWRAPMPFPVGC*LVTVSRVEKSKPQG Trigger: GCCCTGTGGCTTGCTCTTTTCTACCCTGGAGACAGTCACAAGGCAGCATCCCACTGGAAAGGGCATCGGTGCCCTCCAAGGGGAGATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | CTCTCCTCCAAGAGCATTATGGAGCAGAGGGCTTCGGCCACAGCCTaGTCCGACACAGCCTGGCATTTGAGCAGCATCTTGCTTTCGTGC | + |
Preference number: 5 (lower is better) Translates to: LSSKSIMEQRASATA*SDTAWHLSSILLSC Trigger: GCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTCCATAATGCTCTTGGAGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | GGCAGAGTTCTTAGGCTGGTGCGTGGGGGTGGTATCCTTGAGCAATaGTGTGTCACTGGAGGGAAGGTAGGCCAGGAGGTCGTCCAGTTT | + |
Preference number: 5 (lower is better) Translates to: GRVLRLVRGGGILEQ*CVTGGKVGQEVVQF Trigger: AAACTGGACGACCTCCTGGCCTACCTTCCCTCCAGTGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | CCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGGACACAGCCTGGCATTaGAGCAGCATCTTGCTTTCG | + |
Preference number: 5 (lower is better) Translates to: PSPAGGPHSVMELERLVWDTAWH*SSILLS Trigger: CGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTC...CCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | CCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGTTCACCTCCTCCCCCTaGCTGCTCAGAACCATGGTG | + |
Preference number: 5 (lower is better) Translates to: PCFQTGKEPCFSPVAGRAFTSSP*LLRTMV Trigger: CACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAA...CGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CAA 90 bp | GCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACATATTCTGGAGTCTGCCTaGCTCCGGCCACTCTTCACC | + |
Preference number: 5 (lower is better) Translates to: AEARFSPSPTQLKAQGRHILESA*LRPLFT Trigger: GGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAAT...ATGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | CTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG | + |
Preference number: 5 (lower is better) Translates to: LVSRLGRNLAFHLWLGGRTRRLR*LLRCGV Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...CCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CAA 90 bp | CTGGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGAGGCACTGACCTGGGCTaGGGTTTCAACGCTTCTACT | + |
Preference number: 5 (lower is better) Translates to: LAEARFSPSPTQLKAQGRGTDLG*GFNAST Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCC...TCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | GACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCAGACAGCTTGTGGAACTGGGCTaGGGTTTCAACGCTTCTACT | + |
Preference number: 5 (lower is better) Translates to: DWEGTLLFTCGWEGGARQLVELG*GFNAST Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAG...CTGTCTGGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS GCA 90 bp | AGCTTCATCTCCCCTTGGAGGGCACCGATGCCCTTTCCAGTGGGATaGTGCCTTGTGACTGTCTCCAGGGTAGAAAAGAGCAAGCCACAG | + |
Preference number: 5 (lower is better) Translates to: SFISPWRAPMPFPVG*CLVTVSRVEKSKPQ Trigger: CTGTGGCTTGCTCTTTTCTACCCTGGAGACAGTCACAAGGCAGCATCCCACTGGAAAGGGCATCGGTGCCCTCCAAGGGGAGATGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | AAGCCTTCTCTGGTCAGTGTCTGTAACCGATCCAGGAAGAGCTGCTaGATCAGGTCCTCCCAGAACAAGAGCGGCTTCTCCAGAAGCCGC | + |
Preference number: 5 (lower is better) Translates to: KPSLVSVCNRSRKSC*IRSSQNKSGFSRSR Trigger: GCGGCTTCTGGAGAAGCCGCTCTTGTTCTGGGAGGACCTGATGCAGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | ACGACGGACTTGATGCAGGCCACGGACTGCGTACGCAGCATGTCCTaGACGGTCCCAGCATCTGCGTATCGATCAAAGGCAGAGTTCTTA | + |
Preference number: 5 (lower is better) Translates to: TTDLMQATDCVRSMS*TVPASAYRSKAEFL Trigger: TAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | GACATCCTTTTGTTCCCGTGTGACTTCTTCAATGGTGCACAGCTCTaGCTGGATGCAGCCCACGACGGACTTGATGCAGGCCACGGACTG | + |
Preference number: 5 (lower is better) Translates to: DILLFPCDFFNGAQL*LDAAHDGLDAGHGL Trigger: CAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAAAAGGATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | TGTGCTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGGTCAAAAGGGTCAATGAGGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: CAEVRCTRRLRLLLR*GVKTSRSKGSMRAS Trigger: GGAGGCCCTCATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000152653.8 |
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CDS CCA 90 bp | AGGTACTCCTGGCTGATGGGATGTGCGAGAGTTCGGAGTGTGGGCTaGAACTCGATAATGGAGGTGGGCAGGTGTCTGAACCAGCTGCAT | + |
Preference number: 5 (lower is better) Translates to: RYSWLMGCARVRSVG*NSIMEVGRCLNQLH Trigger: ATGCAGCTGGTTCAGACACCTGCCCACCTCCATTATCGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | TCCTTTTGTTCCCGTGTGACTTCTTCAATGGTGCACAGCTCTGCCTaGATGCAGCCCACGACGGACTTGATGCAGGCCACGGACTGCGTA | + |
Preference number: 5 (lower is better) Translates to: SFCSRVTSSMVHSSA*MQPTTDLMQATDCV Trigger: TACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | TTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCCTCGGTTCTGGGTCATaGGAAATGCCCCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: FPDWEGTLLFTCGWEGGALGSGS*EMPLLS Trigger: AGAAAGAAGGGGCATTTCCAATGACCCAGAACCGAG...GGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CAA 90 bp | CTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG | + |
Preference number: 5 (lower is better) Translates to: LYRVLCGLHSLWSGSGYITRRLR*LLRCGV Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...AATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | GCATCTTTCTATGAGCTCCAGCTAGTGAAACCCTGTACACTCTATTGCGCCGCCTGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG | + |
Preference number: 5 (lower is better) Translates to: ASFYELQLVKPCTLYCAAWGSWE*KVLLRE Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...GGCGGCGCAATAGAGTGTACAGGGTTTCACTAGCTGGAGCTCATAGAAAGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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CDS-3UTR CAA 90 bp | CATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGTGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG | + |
Preference number: 5 (lower is better) Translates to: HSLFPDWEGTLLFTCGWEWGSWE*KVLLRE Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...CTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CAA 90 bp | GAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGTGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG | + |
Preference number: 5 (lower is better) Translates to: ESLGIVPMLLGHTREPGKWGSWE*KVLLRE Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...CTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR CAA 90 bp | GGCCAGGCTTTGCCCATTCCTTGTTTCCAGACTGGGAAGGAACCTTGCTTTTCAGGCCTGCAGACGGCTTaGGGGAGGGGCTTTGCAACA | + |
Preference number: 5 (lower is better) Translates to: GQALPIPCFQTGKEPCFSGLQTA*GRGFAT Trigger: TGTTGCAAAGCCCCTCCCCAAAGCCGTCTGCAGGCC...TGAAAAGCAAGGTTCCTTCCCAGTCTGGAAACAAGGAATGGGCAAAGCCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS TCA 90 bp | CTGCGTGCAGCTTGGTGCTGTGAAGGACATCCTTTTGTTCCCGTGTaGCTTCTTCAATGGTGCACAGCTCTGCCTGGATGCAGCCCACGA | + |
Preference number: 5 (lower is better) Translates to: LRAAWCCEGHPFVPV*LLQWCTALPGCSPR Trigger: TCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | CCATTTCTGCAGCGTGTCTTTCAGGTACTCCTGGCTGATGGGATGTaGGAGAGTTCGGAGTGTGGGCTGGAACTCGATAATGGAGGTGGG | + |
Preference number: 5 (lower is better) Translates to: PFLQRVFQVLLADGM*ESSECGLELDNGGG Trigger: CCCACCTCCATTATCGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGACACGCTGCAGAAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | GTCCCAGCATCTGCGTATCGATCAAAGGCAGAGTTCTTAGGCTGGTaGGTGGGGGTGGTATCCTTGAGCAATGGTGTGTCACTGGAGGGA | + |
Preference number: 5 (lower is better) Translates to: VPASAYRSKAEFLGW*VGVVSLSNGVSLEG Trigger: TCCCTCCAGTGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | AGAACTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGGTCAAAAGGGTCAATGAGGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: RTEVRCTRRLRLLLR*GVKTSRSKGSMRAS Trigger: GGAGGCCCTCATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS CCA 90 bp | ACGGTCCCAGCATCTGCGTATCGATCAAAGGCAGAGTTCTTAGGCTaGTGCGTGGGGGTGGTATCCTTGAGCAATGGTGTGTCACTGGAG | + |
Preference number: 5 (lower is better) Translates to: TVPASAYRSKAEFLG*CVGVVSLSNGVSLE Trigger: CTCCAGTGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGACCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | TTTCCAGACTGGGAAGGAACCTTGCTTTTCACCTGTGGCTGGGAGGGCGGGGCCGTTTTCCTCTGTGAGTaGCTCATAGGCAGCTATGAC | + |
Preference number: 5 (lower is better) Translates to: FPDWEGTLLFTCGWEGGAVFLCE*LIGSYD Trigger: GTCATAGCTGCCTATGAGCAACTCACAGAGGAAAAC...GGCCCCGCCCTCCCAGCCACAGGTGAAAAGCAAGGTTCCTTCCCAGTCTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CAA 90 bp | GGCCGAAGCACGTTTCTCCCCATCTCCCACCCAACTAAAGGCACAGGGGAGACACTCGGTTCTGGGTCATaGGAAATGCCCCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: GRSTFLPISHPTKGTGETLGSGS*EMPLLS Trigger: AGAAAGAAGGGGCATTTCCAATGACCCAGAACCGAG...TGTCTCCCCTGTGCCTTTAGTTGGGTGGGAGATGGGGAGAAACGTGCTTCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | TCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATATTCTGGAGTCTGCCTaGCTCCGGCCACTCTTCACC | + |
Preference number: 5 (lower is better) Translates to: SCAVRSPQPVVWLWVYFYILESA*LRPLFT Trigger: GGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAAT...ATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGTGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG | + |
Preference number: 5 (lower is better) Translates to: LPSYLLVCRCLSMGCSPLWGSWE*KVLLRE Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | GAGTCGTCTTCCTCGCTTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCTTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTG | + |
Preference number: 5 (lower is better) Translates to: ESSSSLASCLNKEPGCVVLPSPF*CLSCSV Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAA...GACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS TCA 90 bp | AAATCAGAAATTTCACAAGTGCTGTGCTCCAGACCCGGTAGGCCATaGCGCTCTGTTGGAGCAGGACTTCCTTCACTCCCTGCCACTGGG | + |
Preference number: 5 (lower is better) Translates to: KSEISQVLCSRPGRP*RSVGAGLPSLPATG Trigger: CCCAGTGGCAGGGAGTGAAGGAAGTCCTGCTCCAACAGAGCGTCATGGCCTACCGGGTCTGGAGCACAGCACTTGTGAAATTTCTGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | TCAAAGCCTTCTCTGGTCAGTGTCTGTAACCGATCCAGGAAGAGCTaGTGCATCAGGTCCTCCCAGAACAAGAGCGGCTTCTCCAGAAGC | + |
Preference number: 5 (lower is better) Translates to: SKPSLVSVCNRSRKS*CIRSSQNKSGFSRS Trigger: GCTTCTGGAGAAGCCGCTCTTGTTCTGGGAGGACCTGATGCAGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | CTTTCGTGCAAAATAGTTGACCGGAAGTGGCTGGCTGCTGCCACCTaGCGGATGAGGATTGGAAATCTCGAGAGGATGGGGCTGTATCTG | + |
Preference number: 5 (lower is better) Translates to: LSCKIVDRKWLAAAT*RMRIGNLERMGLYL Trigger: CAGATACAGCCCCATCCTCTCGAGATTTCCAATCCTCATCCGCCAGGTGGCAGCAGCCAGCCACTTCCGGTCAACTATTTTGCACGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | ATTATGGAGCAGAGGGCTTCGGCCACAGCCTGGTCCGACACAGCCTaGCATTTGAGCAGCATCTTGCTTTCGTGCAAAATAGTTGACCGG | + |
Preference number: 5 (lower is better) Translates to: IMEQRASATAWSDTA*HLSSILLSCKIVDR Trigger: CCGGTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTCCATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | TTGCACATGTCGATCCATTTCTGCAGCGTGTCTTTCAGGTACTCCTaGCTGATGGGATGTGCGAGAGTTCGGAGTGTGGGCTGGAACTCG | + |
Preference number: 5 (lower is better) Translates to: LHMSIHFCSVSFRYS*LMGCARVRSVGWNS Trigger: CGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGACACGCTGCAGAAATGGATCGACATGTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | GGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGTTAGCTCTTTGGAGCTGTaGGAGATGGATTCAAAGCCT | + |
Preference number: 5 (lower is better) Translates to: GMLSLGTEQPSTRKTRDVSSLEL*EMDSKP Trigger: AGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCT...AACGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | AGCCAAGGCAGTGGTCAGTGCAGACCAAGTGCAGGCTGCCTGCTAACACCTAGGGTGAAGGACATCCTTTaGTTCCCGTGTGACTTCTTC | + |
Preference number: 5 (lower is better) Translates to: SQGSGQCRPSAGCLLTPRVKDIL*FPCDFF Trigger: GAAGAAGTCACACGGGAACAAAAGGATGTCCTTCAC...CCTAGGTGTTAGCAGGCAGCCTGCACTTGGTCTGCACTGACCACTGCCTTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | ATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGACCAGGGACGGTTTTCCTCTGTGAGTaGCTCATAGGCAGCTATGAC | + |
Preference number: 5 (lower is better) Translates to: MGCSPLEQNSRPLGRPGTVFLCE*LIGSYD Trigger: GTCATAGCTGCCTATGAGCAACTCACAGAGGAAAAC...CGTCCCTGGTCTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS TCA 90 bp | TGGCAGAGTCTGGCCATGAAGAGGACTGCGTGCAGCTTGGTGCTGTaGAGGACATCCTTTTGTTCCCGTGTGACTTCTTCAATGGTGCAC | + |
Preference number: 5 (lower is better) Translates to: WQSLAMKRTACSLVL*RTSFCSRVTSSMVH Trigger: GTGCACCATTGAAGAAGTCACACGGGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAGTCCTCTTCATGGCCAGACTCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | GGCAGGTCGTTGGGGCTCTCGGACCAGAGGAAGAAAGACATGTTCTaGTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTTGGTCTCC | + |
Preference number: 5 (lower is better) Translates to: GRSLGLSDQRKKDMF*SKWTCLFDVELLVS Trigger: GGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGAGAGCCCCAACGACCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | TTAATGCACGGTGTCCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGAGTCC | + |
Preference number: 5 (lower is better) Translates to: LMHGVLGLGFNASTG*PRLSCACHAQWKES Trigger: GGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGACACCGTGCATTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS GCA 90 bp | TCTTTTGGCACTGACCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGAGTCC | + |
Preference number: 5 (lower is better) Translates to: SFGTDLGLGFNASTG*PRLSCACHAQWKES Trigger: GGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGTGCCAAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | CTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTCTCGGTTCTGGGTCATaGGAAATGCCCCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: LYRVLCGLHSLWSGSGYILGSGS*EMPLLS Trigger: AGAAAGAAGGGGCATTTCCAATGACCCAGAACCGAG...AATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | AACCCTGTACACTCTATTGCGCCGCCATTAAAAGCAGCCTTAGTGCATTGCCGTTTCACCTCCTCCCCCTaGCTGCTCAGAACCATGGTG | + |
Preference number: 5 (lower is better) Translates to: NPVHSIAPPLKAALVHCRFTSSP*LLRTMV Trigger: CACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAA...ACGGCAATGCACTAAGGCTGCTTTTAATGGCGGCGCAATAGAGTGTACAGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134418.8 |
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CDS-3UTR CAA 90 bp | TCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTCGCCTTTCTTGTGCTaGTCATGCTCAGTGGAAGGA | + |
Preference number: 5 (lower is better) Translates to: SLSCAVRSPQPVVWLWVYSPFLC*SCSVEG Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGA...ATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | AGCTTGAATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGCACGGTGTCCTGGGCTaGGGTTTCAACGCTTCTACT | + |
Preference number: 5 (lower is better) Translates to: SLNNEGAGESSSSLASCLHGVLG*GFNAST Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGGACACCGTG...CAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATTCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS TCA 90 bp | TTATGGGGCTCCTGGGAGTTGAAAGTGCTGCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACCAAGCCAAATAGAACTGAAGTCCGC | + |
Preference number: 5 (lower is better) Translates to: LWGSWELKVLLREAN*FSVPVTKPNRTEVR Trigger: GCGGACTTCAGTTCTATTTGGCTTGGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS GCA 90 bp | TTTCCTCTTGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGAGTCC | + |
Preference number: 5 (lower is better) Translates to: FPLVELGLGFNASTG*PRLSCACHAQWKES Trigger: GGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS CCA 90 bp | TTGGGGCTCTCGGACCAGAGGAAGAAAGACATGTTCTGCTCAAAGTaGACATGCTTGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTGC | + |
Preference number: 5 (lower is better) Translates to: LGLSDQRKKDMFCSK*TCLFDVELLVSSSC Trigger: GCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGAGAGCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | CCCATTTCCTCTTGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTaGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGA | + |
Preference number: 5 (lower is better) Translates to: PISSCGTGLGFQRFY*LPSPFLCLSCSVEG Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGAGGAAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS-3UTR CAA 90 bp | AGGGCACCCCAGCCCTGCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTACGTACATAAGCAGATaGCCGATCCCATTTTTAATG | + |
Preference number: 5 (lower is better) Translates to: RAPQPCRGPTFCHGTGKITYISR*PIPFLM Trigger: CATTAAAAATGGGATCGGCAATCTGCTTATGTACGT...AATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGCAGGGCTGGGGTGCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | ATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACAGCCGTCCACTCGGAAGCTCGGTTCTGGGTCATaGGAAATGCCCCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: MSVYGMLSLGTEQPSTRKLGSGS*EMPLLS Trigger: AGAAAGAAGGGGCATTTCCAATGACCCAGAACCGAG...CTTCCGAGTGGACGGCTGTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | CGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTATTTTCACCTCCTCCCCCTaGCTGCTCAGAACCATGGTG | + |
Preference number: 5 (lower is better) Translates to: RSPQPVVWLWVYFYFEAIFTSSP*LLRTMV Trigger: CACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAA...AATAGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | AATAATGAAGGTGCAGGTGAGTCGTCTTCCTCGCTTGCAAGCTGCCTGAATAAGACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTG | + |
Preference number: 5 (lower is better) Translates to: NNEGAGESSSSLASCLNKTRRLR*LLRCGV Trigger: CACACCGCATCTCAACAGCAACCTCAACCGCCTGGT...CTTATTCAGGCAGCTTGCAAGCGAGGAAGACGACTCACCTGCACCTTCATTATT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR CAA 90 bp | TATTTAGAGAGCCTGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCATGGGGCTCCTGGGAGTaGAAAGTGCTGCTCCGGGAG | + |
Preference number: 5 (lower is better) Translates to: YLESLGIVPMLLGHTREPWGSWE*KVLLRE Trigger: CTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCA...TGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCAGGCTCTCTAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137878.2 ENSMUST00000152653.8 |
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CDS-3UTR CAA 90 bp | GCCGGGGGCCCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACTCGCCTTTCTTGTGCTaGTCATGCTCAGTGGAAGGA | + |
Preference number: 5 (lower is better) Translates to: AGGPHSVMELERLVWCRNSPFLC*SCSVEG Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGA...GTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGGGCCCCCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | GTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGTATATTTCTATTTTGAGGCTTTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTG | + |
Preference number: 5 (lower is better) Translates to: VRSPQPVVWLWVYFYFEALPSPF*CLSCSV Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAA...AGCCTCAAAATAGAAATATACCCAGAGCCAGACCACAGGCTGTGGAGACCGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS-3UTR CAA 90 bp | GGCCATCTCTATCGTGTGCTGTGCGGTCTCCACAGCCTGTGGTCTGGCTCTGGGATGATGCCTAATTGGTaGGTTATTTCTAAAAGCTGG | + |
Preference number: 5 (lower is better) Translates to: GHLYRVLCGLHSLWSGSGMMPNW*VISKSW Trigger: CCAGCTTTTAGAAATAACCAACCAATTAGGCATCAT...CCCAGAGCCAGACCACAGGCTGTGGAGACCGCACAGCACACGATAGAGATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS GCA 90 bp | GGCAGACTCGTTGCTAAGCAAATCCCATATGGCGTCTCTGATGCCTaGCAGACCCTTCATGCTCTTCACGTACATAAGCAGATTGCCGAT | + |
Preference number: 5 (lower is better) Translates to: GRLVAKQIPYGVSDA*QTLHALHVHKQIAD Trigger: ATCGGCAATCTGCTTATGTACGTGAAGAGCATGAAGGGTCTGGCAGGCATCAGAGACGCCATATGGGATTTGCTTAGCAACGAGTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 90 bp | CTCTCGGACCAGAGGAAGAAAGACATGTTCTGCTCAAAGTGGACATaGTTGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTGCAGAGCT | + |
Preference number: 5 (lower is better) Translates to: LSDQRKKDMFCSKWT*LFDVELLVSSSCRA Trigger: AGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | GCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTTGGAGATaGATTCAAAGCCTTCTCTGGTCAGTGTCTGTAACCGATCCAGGA | + |
Preference number: 5 (lower is better) Translates to: APAELRLEALWSCWR*IQSLLWSVSVTDPG Trigger: TCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | TACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAACAGAACCGCAGCTCCTCCTTCTaGTGTTCGATCTCGGCTCGG | + |
Preference number: 5 (lower is better) Translates to: YLLVCRCLSMGCSPLEQNRSSSF*CSISAR Trigger: CCGAGCCGAGATCGAACACAAGAAGGAGGAGCTGCG...GTTCTGTTCCAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGAACACGGGCTAATGGCTaGGGCTTTCATGGAGAGGCC | + |
Preference number: 5 (lower is better) Translates to: PHSVMELERLVWCRNRSRTRANG*GFHGEA Trigger: GGCCTCTCCATGAAAGCCCAAGCCATTAGCCCGTGT...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | CTAGAAGCTCTTTGGAGCTGTTGGAGATGGATTCAAAGCCTTCTCTaGTCAGTGTCTGTAACCGATCCAGGAAGAGCTGCTGCATCAGGT | + |
Preference number: 5 (lower is better) Translates to: LEALWSCWRWIQSLL*SVSVTDPGRAAASG Trigger: ACCTGATGCAGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | TCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTTaGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTCTGTAACCGAT | + |
Preference number: 5 (lower is better) Translates to: SPAPAELRLEALWSC*RWIQSLLWSVSVTD Trigger: ATCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | AGTTGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTaGAGCTGTTGGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTCT | + |
Preference number: 5 (lower is better) Translates to: SCWSPAPAELRLEAL*SCWRWIQSLLWSVS Trigger: AGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | ACATGTTCTGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTTaGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGC | + |
Preference number: 5 (lower is better) Translates to: TCSAQSGHACSMWSC*SPAPAELRLEALWS Trigger: GCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | ATGCAGGTCTTCAGCATCTCCTGTAGGGTGACCTTTGGCAAAGCATaGCCTCCAACCCGATTAACTTCCTGGCATAAGCTAAACAGGAAG | + |
Preference number: 5 (lower is better) Translates to: MQVFSISCRVTFGKA*PPTRLTSWHKLNRK Trigger: CTTCCTGTTTAGCTTATGCCAGGAAGTTAATCGGGTTGGAGGCCATGCTTTGCCAAAGGTCACCCTACAGGAGATGCTGAAGACCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000148736.8 |
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CDS-3UTR CAA 90 bp | CTGCCGTCCTACCTCTTAGTATGTAGATGTCTGTCTATGGGATGCTCTCCCTTGGAGAGCCAGGCAAGCTaGAATAATGAAGGTGCAGGT | + |
Preference number: 5 (lower is better) Translates to: LPSYLLVCRCLSMGCSPLESQAS*NNEGAG Trigger: ACCTGCACCTTCATTATTCAAGCTTGCCTGGCTCTC...CAAGGGAGAGCATCCCATAGACAGACATCTACATACTAAGAGGTAGGACGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 90 bp | GGAAGAAAGACATGTTCTGCTCAAAGTGGACATGCTTGTTCGATGTaGAGTTGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCT | + |
Preference number: 5 (lower is better) Translates to: GRKTCSAQSGHACSM*SCWSPAPAELRLEA Trigger: AGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | TTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGTCTCGAAGAGCGCGTaGGGATCGCGCAGATCCAGC | + |
Preference number: 5 (lower is better) Translates to: FHILFSSSLYPRRYREHCVSKSA*GSRRSS Trigger: GCTGGATCTGCGCGATCCCAACGCGCTCTTCGAGAC...GCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | ATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGCAGTGTTCACCTCCTCCCCCTaGCTGCTCAGAACCATGGTG | + |
Preference number: 5 (lower is better) Translates to: ILFSSSLYPRRYREHCAVFTSSP*LLRTMV Trigger: CACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAA...CACTGCGCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | CCACATTCTGTCATGGAACTGGAAAGATTGGTGTGGTGTAGAAACAGGAGCAGATTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTG | + |
Preference number: 5 (lower is better) Translates to: PHSVMELERLVWCRNRSRLPSPF*CLSCSV Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAA...TCTGCTCCTGTTTCTACACCACACCAATCTTTCCAGTTCCATGACAGAATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | TGGGCATTGTTCCTATGCTACTTGGTCATACTAGAGAGCCAGGCAAGCTTGAATTCGCCTTTCTTGTGCTaGTCATGCTCAGTGGAAGGA | + |
Preference number: 5 (lower is better) Translates to: WALFLCYLVILESQASLNSPFLC*SCSVEG Trigger: TCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGA...ATTCAAGCTTGCCTGGCTCTCTAGTATGACCAAGTAGCATAGGAACAATGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS-3UTR CAA 90 bp | TTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATAGAGAACATTGCGGGGCCAACCTGGGCTaGGGTTTCAACGCTTCTACT | + |
Preference number: 5 (lower is better) Translates to: FHILFSSSLYPRRYREHCGANLG*GFNAST Trigger: AGTAGAAGCGTTGAAACCCAAGCCCAGGTTGGCCCC...GCAATGTTCTCTATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | GGAGAATATCACTTCCATATCTTATTTTCTTCTAGTCTGTACCCCAGACGCTATTTCGATGTGGAGTTGTaGGTCTCCAGCTCCTGCAGA | + |
Preference number: 5 (lower is better) Translates to: GEYHFHILFSSSLYPRRYFDVEL*VSSSCR Trigger: TCTGCAGGAGCTGGAGACCAACAACTCCACATCGAA...ATAGCGTCTGGGGTACAGACTAGAAGAAAATAAGATATGGAAGTGATATTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCATCAAAGTGGACATGCTaGTTCGATGTGGAGTTGTTG | + |
Preference number: 5 (lower is better) Translates to: GTLSTFPSCGLYFTFEFPSKWTC*FDVELL Trigger: CAACAACTCCACATCGAACAAGCATGTCCACTTTGA...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS-3UTR CAA 90 bp | GGGACGTTAAGCACATTTCCTAGTTGTGGTCTTTATTTTACATTTGAATTTCCACATTTGAGCAGCATCTaGCTTTCGTGCAAAATAGTT | + |
Preference number: 5 (lower is better) Translates to: GTLSTFPSCGLYFTFEFPHLSSI*LSCKIV Trigger: AACTATTTTGCACGAAAGCAAGATGCTGCTCAAATG...TGGAAATTCAAATGTAAAATAAAGACCACAACTAGGAAATGTGCTTAACGTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | GAACTTCTCGGACGGCGGCTGTGGCTGCGGGGCCCGTaGGACCCGGGGCGCCACGGAGCCGGCCTGGCGGAG | + |
Preference number: 6 (lower is better) Translates to: ELLGRRLWLRGP*DPGRHGAGLAE Trigger: CTCCGCCAGGCCGGCTCCGTGGCGCCCCGGGTCCCACGGGCCCCGCAGCCACAGCCGCCGTCCGAGAAGTTC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | ACGGCGTCCACCAGGCCCTCGGCGCAGCGGCGCATCTaGCCGATGGTGTCCGCCGCCTCGATCAGGTCGCGG | + |
Preference number: 6 (lower is better) Translates to: TASTRPSAQRRI*PMVSAASIRSR Trigger: CCGCGACCTGATCGAGGCGGCGGACACCATCGGCCAGATGCGCCGCTGCGCCGAGGGCCTGGTGGACGCCGT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 |
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CDS CCA 72 bp | CCACCAGGCCCTCGGCGCAGCGGCGCATCTGGCCGATaGTGTCCGCCGCCTCGATCAGGTCGCGGTACCGCT | + |
Preference number: 6 (lower is better) Translates to: PPGPRRSGASGR*CPPPRSGRGTA Trigger: AGCGGTACCGCGACCTGATCGAGGCGGCGGACACCATCGGCCAGATGCGCCGCTGCGCCGAGGGCCTGGTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 |
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CDS TCA 72 bp | ACCTGGCGCTCCAGCCCGCGGATCTCCTCCGCTCCATaGGTCTCGAAGAGCGCGTTGGGATCGCGCAGATCC | + |
Preference number: 6 (lower is better) Translates to: TWRSSPRISSAP*VSKSALGSRRS Trigger: GGATCTGCGCGATCCCAACGCGCTCTTCGAGACTCATGGAGCGGAGGAGATCCGCGGGCTGGAGCGCCAGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 |
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CDS GCA 72 bp | AGAAGCAGTGATCGAGTGAATCCACAAATCAGAAACTaGGGGGCCCGTGGGACCCGGGGCGCCACGGAGCCG | + |
Preference number: 6 (lower is better) Translates to: RSSDRVNPQIRN*GARGTRGATEP Trigger: CGGCTCCGTGGCGCCCCGGGTCCCACGGGCCCCGCAGTTTCTGATTTGTGGATTCACTCGATCACTGCTTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063776.14 |
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CDS CCA 72 bp | GGGCTTGGCGCGGAGAGCTCTCCTCCAAGAGCATTATaGAGCAGAGGGCTTCGGCCACAGCCTGGTCCGACA | + |
Preference number: 6 (lower is better) Translates to: GLGAESSPPRAL*SRGLRPQPGPT Trigger: TGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTCCATAATGCTCTTGGAGGAGAGCTCTCCGCGCCAAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 72 bp | ATGCAGCCCACGACGGACTTGATGCAGGCCACGGACTaGGTACGCAGCATGTCCTGCACGGTCCCAGCATCT | + |
Preference number: 6 (lower is better) Translates to: MQPTTDLMQATD*VRSMSCTVPAS Trigger: AGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 72 bp | TGCTGTGCTCCAGACCCGGTAGGCCATGACGCTCTGTaGGAGCAGGACTTCCTTCACTCCCTGCCACTGGGC | + |
Preference number: 6 (lower is better) Translates to: CCAPDPVGHDAL*EQDFLHSLPLG Trigger: GCCCAGTGGCAGGGAGTGAAGGAAGTCCTGCTCCAACAGAGCGTCATGGCCTACCGGGTCTGGAGCACAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | TCTTCAATGGTGCACAGCTCTGCCTGGATGCAGCCCACGACGGACTaGATGCAGGCCACGGACTGCGTACGCAGCATGTCCTGCACGGTC | + |
Preference number: 6 (lower is better) Translates to: SSMVHSSAWMQPTTD*MQATDCVRSMSCTV Trigger: GACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 72 bp | GCCTCTCGGTCATCTTCTCCATTCTGGAGTCTGCCTTaGTCCGGCCACTCTTCACCTCCTCCCCCTTGCTGC | + |
Preference number: 6 (lower is better) Translates to: ASRSSSPFWSLP*SGHSSPPPPCC Trigger: GCAGCAAGGGGGAGGAGGTGAAGAGTGGCCGGAGCAAGGCAGACTCCAGAATGGAGAAGATGACCGAGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000134418.8 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS TCA 72 bp | GAACCCCCGCACTGTCCCACAACACACTGCTTTAGGTaGGGGCACAGCTCTCCCAGAGACTGGCAGAGTCTG | + |
Preference number: 6 (lower is better) Translates to: EPPHCPTTHCFR*GHSSPRDWQSL Trigger: CAGACTCTGCCAGTCTCTGGGAGAGCTGTGCCCTCACCTAAAGCAGTGTGTTGTGGGACAGTGCGGGGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS TCA 72 bp | TCTTCACCTCCTCCCCCTTGCTGCTCAGAACCATGGTaGGGTAGCGTAGGTCGTAGAGGAGCTGCAGGGCTC | + |
Preference number: 6 (lower is better) Translates to: SSPPPPCCSEPW*GSVGRRGAAGL Trigger: GAGCCCTGCAGCTCCTCTACGACCTACGCTACCTCACCATGGTTCTGAGCAGCAAGGGGGAGGAGGTGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000134418.8 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS CCA 72 bp | CTTAGGCTGGTGCGTGGGGGTGGTATCCTTGAGCAATaGTGTGTCACTGGAGGGAAGGTAGGCCAGGAGGTC | + |
Preference number: 6 (lower is better) Translates to: LRLVRGGGILEQ*CVTGGKVGQEV Trigger: GACCTCCTGGCCTACCTTCCCTCCAGTGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | CGTCTGAATAGTCGCCTTTCTGGCCAGCAGGAAGTCTGTGAGGGCTaGGCGCGGAGAGCTCTCCTCCAAGAGCATTATGGAGCAGAGGGC | + |
Preference number: 6 (lower is better) Translates to: RLNSRLSGQQEVCEG*ARRALLQEHYGAEG Trigger: GCCCTCTGCTCCATAATGCTCTTGGAGGAGAGCTCTCCGCGCCAAGCCCTCACAGACTTCCTGCTGGCCAGAAAGGCGACTATTCAGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | TCGGCCACAGCCTGGTCCGACACAGCCTGGCATTTGAGCAGCATCTaGCTTTCGTGCAAAATAGTTGACCGGAAGTGGCTGGCTGCTGCC | + |
Preference number: 6 (lower is better) Translates to: SATAWSDTAWHLSSI*LSCKIVDRKWLAAA Trigger: GGCAGCAGCCAGCCACTTCCGGTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS TCA 72 bp | TCCTGGGAGTTGAAAGTGCTGCTCCGGGAGGCAAACTaGTTCTCTGTGCTGAAGTCCGCTGCACCAGGCGGT | + |
Preference number: 6 (lower is better) Translates to: SWELKVLLREAN*FSVLKSAAPGG Trigger: ACCGCCTGGTGCAGCGGACTTCAGCACAGAGAATCAGTTTGCCTCCCGGAGCAGCACTTTCAACTCCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000152653.8 |
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CDS GCA 72 bp | TCCCCTTGGAGGGCACCGATGCCCTTTCCAGTGGGATaGTGCCTTGTGACTGTCTCCAGGGTAGAAAAGAGC | + |
Preference number: 6 (lower is better) Translates to: SPWRAPMPFPVG*CLVTVSRVEKS Trigger: GCTCTTTTCTACCCTGGAGACAGTCACAAGGCAGCATCCCACTGGAAAGGGCATCGGTGCCCTCCAAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 72 bp | TTGATGCAGGCCACGGACTGCGTACGCAGCATGTCCTaGACGGTCCCAGCATCTGCGTATCGATCAAAGGCA | + |
Preference number: 6 (lower is better) Translates to: LMQATDCVRSMS*TVPASAYRSKA Trigger: TGCCTTTGATCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAGTCCGTGGCCTGCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 72 bp | CCGGGAGGCAAACTGATTCTCTGTGCTGAAGTCCGCTaGACCAGGCGGTTGAGGTTGCTGTTGAGATGCGGT | + |
Preference number: 6 (lower is better) Translates to: PGGKLILCAEVR*TRRLRLLLRCG Trigger: ACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAGAATCAGTTTGCCTCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000152653.8 |
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CDS GCA 72 bp | GCCTGCAGACGGCTTTGGGGAGGGGCTTTGCAACACTaGCCCATTTCCTCTTGTGGAACTGGGCTTGGGTTT | + |
Preference number: 6 (lower is better) Translates to: ACRRLWGGALQH*PISSCGTGLGF Trigger: AAACCCAAGCCCAGTTCCACAAGAGGAAATGGGGCAGTGTTGCAAAGCCCCTCCCCAAAGCCGTCTGCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS CAA 90 bp | GAGCAGAGGGCTTCGGCCACAGCCTGGTCCGACACAGCCTGGCATTaGAGCAGCATCTTGCTTTCGTGCAAAATAGTTGACCGGAAGTGG | + |
Preference number: 6 (lower is better) Translates to: EQRASATAWSDTAWH*SSILLSCKIVDRKW Trigger: CCACTTCCGGTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS TCA 72 bp | AGGCCAGCGGCAGTATGTTATGGGGCTCCTGGGAGTTaGAAGTGCTGCTCCGGGAGGCAAACTGATTCTCTG | + |
Preference number: 6 (lower is better) Translates to: RPAAVCYGAPGS*KCCSGRQTDSL Trigger: CAGAGAATCAGTTTGCCTCCCGGAGCAGCACTTTCAACTCCCAGGAGCCCCATAACATACTGCCGCTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000134418.8 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 ENSMUST00000152653.8 |
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CDS GCA 72 bp | CTGGTCAGTGTCTGTAACCGATCCAGGAAGAGCTGCTaGATCAGGTCCTCCCAGAACAAGAGCGGCTTCTCC | + |
Preference number: 6 (lower is better) Translates to: LVSVCNRSRKSC*IRSSQNKSGFS Trigger: GGAGAAGCCGCTCTTGTTCTGGGAGGACCTGATGCAGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 72 bp | CTGCGTACGCAGCATGTCCTGCACGGTCCCAGCATCTaGGTATCGATCAAAGGCAGAGTTCTTAGGCTGGTG | + |
Preference number: 6 (lower is better) Translates to: LRTQHVLHGPSI*VSIKGRVLRLV Trigger: CACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGCTGGGACCGTGCAGGACATGCTGCGTACGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 72 bp | TTGTTCCCGTGTGACTTCTTCAATGGTGCACAGCTCTaGCTGGATGCAGCCCACGACGGACTTGATGCAGGC | + |
Preference number: 6 (lower is better) Translates to: LFPCDFFNGAQL*LDAAHDGLDAG Trigger: GCCTGCATCAAGTCCGTCGTGGGCTGCATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | AAGAGCATTATGGAGCAGAGGGCTTCGGCCACAGCCTaGTCCGACACAGCCTGGCATTTGAGCAGCATCTTG | + |
Preference number: 6 (lower is better) Translates to: KSIMEQRASATA*SDTAWHLSSIL Trigger: CAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTGCTCCATAATGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | TGGCTGATGGGATGTGCGAGAGTTCGGAGTGTGGGCTaGAACTCGATAATGGAGGTGGGCAGGTGTCTGAAC | + |
Preference number: 6 (lower is better) Translates to: WLMGCARVRSVG*NSIMEVGRCLN Trigger: GTTCAGACACCTGCCCACCTCCATTATCGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | GGGGGCCAACCTGGGCTTGGGTTTCAACGCTTCTACTaGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCA | + |
Preference number: 6 (lower is better) Translates to: GGQPGLGFQRFY*LPSPFLCLSCS Trigger: TGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTTGGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 |
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CDS CAA 72 bp | GCTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTaGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGG | + |
Preference number: 6 (lower is better) Translates to: AEVRCTRRLRLL*RCGVKTSRSKG Trigger: CCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000152653.8 |
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CDS CAA 72 bp | CTCTGTGCTGAAGTCCGCTGCACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCA | + |
Preference number: 6 (lower is better) Translates to: LCAEVRCTRRLR*LLRCGVKTSRS Trigger: TGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000152653.8 |
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CDS TCA 72 bp | ATTTCACAAGTGCTGTGCTCCAGACCCGGTAGGCCATaGCGCTCTGTTGGAGCAGGACTTCCTTCACTCCCT | + |
Preference number: 6 (lower is better) Translates to: ISQVLCSRPGRP*RSVGAGLPSLP Trigger: AGGGAGTGAAGGAAGTCCTGCTCCAACAGAGCGTCATGGCCTACCGGGTCTGGAGCACAGCACTTGTGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 72 bp | TCCCAGAGACTGGCAGAGTCTGGCCATGAAGAGGACTaGGTGCAGCTTGGTGCTGTGAAGGACATCCTTTTG | + |
Preference number: 6 (lower is better) Translates to: SQRLAESGHEED*VQLGAVKDILL Trigger: CAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAGTCCTCTTCATGGCCAGACTCTGCCAGTCTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
||
CDS GCA 72 bp | GTCCGCTGCACCAGGCGGTTGAGGTTGCTGTTGAGATaGGGTGTGAAGACATCCAGGTCAAAAGGGTCAATG | + |
Preference number: 6 (lower is better) Translates to: VRCTRRLRLLLR*GVKTSRSKGSM Trigger: CATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000134418.8 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 ENSMUST00000152653.8 |
||
CDS GCA 72 bp | GCCAACCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGG | + |
Preference number: 6 (lower is better) Translates to: ANLGLGFNASTG*PRLSCACHAQW Trigger: CCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 |
||
CDS GCA 72 bp | GGTGTCCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGG | + |
Preference number: 6 (lower is better) Translates to: GVLGLGFNASTG*PRLSCACHAQW Trigger: CCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS CCA 72 bp | AAAATAGTTGACCGGAAGTGGCTGGCTGCTGCCACCTaGCGGATGAGGATTGGAAATCTCGAGAGGATGGGG | + |
Preference number: 6 (lower is better) Translates to: KIVDRKWLAAAT*RMRIGNLERMG Trigger: CCCCATCCTCTCGAGATTTCCAATCCTCATCCGCCAGGTGGCAGCAGCCAGCCACTTCCGGTCAACTATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | CAGAGGGCTTCGGCCACAGCCTGGTCCGACACAGCCTaGCATTTGAGCAGCATCTTGCTTTCGTGCAAAATA | + |
Preference number: 6 (lower is better) Translates to: QRASATAWSDTA*HLSSILLSCKI Trigger: TATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGCCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
||
CDS CCA 72 bp | TCGATCCATTTCTGCAGCGTGTCTTTCAGGTACTCCTaGCTGATGGGATGTGCGAGAGTTCGGAGTGTGGGC | + |
Preference number: 6 (lower is better) Translates to: SIHFCSVSFRYS*LMGCARVRSVG Trigger: GCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGACACGCTGCAGAAATGGATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | GGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTaGAAGGAGTCCAAACCTGATCTGACTGGAGGCCAG | + |
Preference number: 6 (lower is better) Translates to: GCPRLSCACHAQ*KESKPDLTGGQ Trigger: CTGGCCTCCAGTCAGATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS CCA 72 bp | GCACGGTGTCCTGGGCTTGGGTTTCAACGCTTCTACTaGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCA | + |
Preference number: 6 (lower is better) Translates to: ARCPGLGFQRFY*LPSPFLCLSCS Trigger: TGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGACACCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS CAA 72 bp | ACTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTaGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGG | + |
Preference number: 6 (lower is better) Translates to: TEVRCTRRLRLL*RCGVKTSRSKG Trigger: CCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS CAA 72 bp | GGCCAACCTGGGCTTGGGTTTCAACGCTTCTACTGGTaGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTG | + |
Preference number: 6 (lower is better) Translates to: GQPGLGFQRFYW*PSPFLCLSCSV Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 |
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CDS CAA 72 bp | CGGTGTCCTGGGCTTGGGTTTCAACGCTTCTACTGGTaGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTG | + |
Preference number: 6 (lower is better) Translates to: RCPGLGFQRFYW*PSPFLCLSCSV Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGACACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137878.2 |
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CDS GCA 72 bp | GACACAGCCTGGCATTTGAGCAGCATCTTGCTTTCGTaGAAAATAGTTGACCGGAAGTGGCTGGCTGCTGCC | + |
Preference number: 6 (lower is better) Translates to: DTAWHLSSILLS*KIVDRKWLAAA Trigger: GGCAGCAGCCAGCCACTTCCGGTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
||
CDS GCA 72 bp | CAGCGTGTCTTTCAGGTACTCCTGGCTGATGGGATGTaGGAGAGTTCGGAGTGTGGGCTGGAACTCGATAAT | + |
Preference number: 6 (lower is better) Translates to: QRVFQVLLADGM*ESSECGLELDN Trigger: ATTATCGAGTTCCAGCCCACACTCCGAACTCTCGCACATCCCATCAGCCAGGAGTACCTGAAAGACACGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 72 bp | GTGCCTGTAACCAAGCCAAATAGAACTGAAGTCCGCTaGACCAGGCGGTTGAGGTTGCTGTTGAGATGCGGT | + |
Preference number: 6 (lower is better) Translates to: VPVTKPNRTEVR*TRRLRLLLRCG Trigger: ACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATTTGGCTTGGTTACAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS GCA 72 bp | ACTGACCTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGG | + |
Preference number: 6 (lower is better) Translates to: TDLGLGFNASTG*PRLSCACHAQW Trigger: CCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGGTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142069.8 |
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CDS GCA 72 bp | GTGGAACTGGGCTTGGGTTTCAACGCTTCTACTGGTTaGCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGG | + |
Preference number: 6 (lower is better) Translates to: VELGLGFNASTG*PRLSCACHAQW Trigger: CCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS CCA 72 bp | GCATCTGCGTATCGATCAAAGGCAGAGTTCTTAGGCTaGTGCGTGGGGGTGGTATCCTTGAGCAATGGTGTG | + |
Preference number: 6 (lower is better) Translates to: ASAYRSKAEFLG*CVGVVSLSNGV Trigger: CACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | GGCTTTGCAACACTGCCCCATTTCCTCTTGTGGAACTaGGCTTGGGTTTCAACGCTTCTACTGGTTGCCCTC | + |
Preference number: 6 (lower is better) Translates to: GFATLPHFLLWN*AWVSTLLLVAL Trigger: GAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGAGGAAATGGGGCAGTGTTGCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS CAA 72 bp | GCTTCGGCCACAGCCTGGTCCGACACAGCCTGGCATTaGAGCAGCATCTTGCTTTCGTGCAAAATAGTTGAC | + |
Preference number: 6 (lower is better) Translates to: ASATAWSDTAWH*SSILLSCKIVD Trigger: GTCAACTATTTTGCACGAAAGCAAGATGCTGCTCAAATGCCAGGCTGTGTCGGACCAGGCTGTGGCCGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | ATTCTCTGTGCTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTaGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGGTCAATGAGG | + |
Preference number: 6 (lower is better) Translates to: ILCAEVRCTRRLRLL*RCGVKTSRSKGSMR Trigger: CCTCATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000152653.8 |
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CDS CAA 90 bp | GGAGGCAAACTGATTCTCTGTGCTGAAGTCCGCTGCACCAGGCGGTaGAGGTTGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCAAAA | + |
Preference number: 6 (lower is better) Translates to: GGKLILCAEVRCTRR*RLLLRCGVKTSRSK Trigger: TTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAGAATCAGTTTGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000152653.8 |
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CDS TCA 72 bp | CTGGCCATGAAGAGGACTGCGTGCAGCTTGGTGCTGTaGAGGACATCCTTTTGTTCCCGTGTGACTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: LAMKRTACSLVL*RTSFCSRVTSS Trigger: TGAAGAAGTCACACGGGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAGTCCTCTTCATGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS TCA 72 bp | TTGTGCTTGTCATGCTCAGTGGAAGGAGTCCAAACCTaGTCTGACTGGAGGCCAGCGGCAGTATGTTATGGG | + |
Preference number: 6 (lower is better) Translates to: LCLSCSVEGVQT*SDWRPAAVCYG Trigger: CCCATAACATACTGCCGCTGGCCTCCAGTCAGATCAGGTTTGGACTCCTTCCACTGAGCATGACAAGCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS GCA 72 bp | TCTGCGTATCGATCAAAGGCAGAGTTCTTAGGCTGGTaGGTGGGGGTGGTATCCTTGAGCAATGGTGTGTCA | + |
Preference number: 6 (lower is better) Translates to: SAYRSKAEFLGW*VGVVSLSNGVS Trigger: TGACACACCATTGCTCAAGGATACCACCCCCACGCACCAGCCTAAGAACTCTGCCTTTGATCGATACGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 72 bp | AATAGAACTGAAGTCCGCTGCACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCA | + |
Preference number: 6 (lower is better) Translates to: NRTEVRCTRRLR*LLRCGVKTSRS Trigger: TGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS CAA 72 bp | GGGTTTCAACGCTTCTACTGGTTGCCCTCGCCTTTCTaGTGCTTGTCATGCTCAGTGGAAGGAGTCCAAACC | + |
Preference number: 6 (lower is better) Translates to: GFQRFYWLPSPF*CLSCSVEGVQT Trigger: GGTTTGGACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS CAA 72 bp | TGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTGGTaGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTG | + |
Preference number: 6 (lower is better) Translates to: CGTGLGFQRFYW*PSPFLCLSCSV Trigger: CACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS CAA 90 bp | CATGAAGAGGACTGCGTGCAGCTTGGTGCTGTGAAGGACATCCTTTaGTTCCCGTGTGACTTCTTCAATGGTGCACAGCTCTGCCTGGAT | + |
Preference number: 6 (lower is better) Translates to: HEEDCVQLGAVKDIL*FPCDFFNGAQLCLD Trigger: ATCCAGGCAGAGCTGTGCACCATTGAAGAAGTCACACGGGAACAAAAGGATGTCCTTCACAGCACCAAGCTGCACGCAGTCCTCTTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | CCAAATAGAACTGAAGTCCGCTGCACCAGGCGGTTGAGGTTGCTGTaGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGGTCAATGAGG | + |
Preference number: 6 (lower is better) Translates to: PNRTEVRCTRRLRLL*RCGVKTSRSKGSMR Trigger: CCTCATTGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS CAA 90 bp | ACCAAGCCAAATAGAACTGAAGTCCGCTGCACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGGTCA | + |
Preference number: 6 (lower is better) Translates to: TKPNRTEVRCTRRLR*LLRCGVKTSRSKGS Trigger: TGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATTTGGCTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS CAA 90 bp | AAACTGATTCTCTGTGCTGAAGTCCGCTGCACCAGGCGGTTGAGGTaGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCAAAAGGGTCA | + |
Preference number: 6 (lower is better) Translates to: KLILCAEVRCTRRLR*LLRCGVKTSRSKGS Trigger: TGACCCTTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGCACAGAGAATCAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134418.8 ENSMUST00000152653.8 |
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CDS CAA 90 bp | GTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTaGGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTCTGTAACCGA | + |
Preference number: 6 (lower is better) Translates to: VSSSCRAETRSSLEL*EMDSKPSLVSVCNR Trigger: TCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | GAGTTGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTaGGAGCTGTTGGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTC | + |
Preference number: 6 (lower is better) Translates to: ELLVSSSCRAETRSS*ELLEMDSKPSLVSV Trigger: GACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | TCGGACCAGAGGAAGAAAGACATGTTCTGCTCAAAGTGGACATGCTaGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTGCAGAGCTGAG | + |
Preference number: 6 (lower is better) Translates to: SDQRKKDMFCSKWTC*FDVELLVSSSCRAE Trigger: CTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | CCTGTAACCAAGCCAAATAGAACTGAAGTCCGCTGCACCAGGCGGTaGAGGTTGCTGTTGAGATGCGGTGTGAAGACATCCAGGTCAAAA | + |
Preference number: 6 (lower is better) Translates to: PVTKPNRTEVRCTRR*RLLLRCGVKTSRSK Trigger: TTTTGACCTGGATGTCTTCACACCGCATCTCAACAGCAACCTCAACCGCCTGGTGCAGCGGACTTCAGTTCTATTTGGCTTGGTTACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS CAA 90 bp | ATTTCCTCTTGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTGGTaGCCCTCGCCTTTCTTGTGCTTGTCATGCTCAGTGGAAGGAGTC | + |
Preference number: 6 (lower is better) Translates to: ISSCGTGLGFQRFYW*PSPFLCLSCSVEGV Trigger: GACTCCTTCCACTGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGAGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS GCA 72 bp | TGCTTGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTaGAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTTG | + |
Preference number: 6 (lower is better) Translates to: CLFDVELLVSSS*RAETRSSLELL Trigger: CAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | GCTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTTaGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCT | + |
Preference number: 6 (lower is better) Translates to: AQSGHACSMWSC*SPAPAELRLEA Trigger: AGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | ACCTTCAGCTTAGAATCCAGGGCAGAACAGAAGTTCTaGACACACGGGCTAATGGCTTGGGCTTTCATGGAG | + |
Preference number: 6 (lower is better) Translates to: TFSLESRAEQKF*THGLMAWAFME Trigger: CTCCATGAAAGCCCAAGCCATTAGCCCGTGTGTCCAGAACTTCTGTTCTGCCCTGGATTCTAAGCTGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | TCTTGTGGAACTGGGCTTGGGTTTCAACGCTTCTACTaGTTGCCCTCGCCTTTCTTGTGCTTGTCATGCTCA | + |
Preference number: 6 (lower is better) Translates to: SCGTGLGFQRFY*LPSPFLCLSCS Trigger: TGAGCATGACAAGCACAAGAAAGGCGAGGGCAACCAGTAGAAGCGTTGAAACCCAAGCCCAGTTCCACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148736.8 |
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CDS CAA 72 bp | TGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTaGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGC | + |
Preference number: 6 (lower is better) Translates to: CSKWTCLFDVEL*VSSSCRAETRS Trigger: GCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | GACATGTTCTGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTTGTaGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAG | + |
Preference number: 6 (lower is better) Translates to: DMFCSKWTCLFDVEL*VSSSCRAETRSSLE Trigger: CTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS TCA 72 bp | TCCTGGGAGTTGAAAGTGCTGCTCCGGGAGGCAAACTaGTTCTCTGTGCCTGTAACCAAGCCAAATAGAACT | + |
Preference number: 6 (lower is better) Translates to: SWELKVLLREAN*FSVPVTKPNRT Trigger: AGTTCTATTTGGCTTGGTTACAGGCACAGAGAATCAGTTTGCCTCCCGGAGCAGCACTTTCAACTCCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000137878.2 ENSMUST00000142069.8 ENSMUST00000148736.8 |
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CDS GCA 72 bp | GTTGCTAAGCAAATCCCATATGGCGTCTCTGATGCCTaGCAGACCCTTCATGCTCTTCACGTACATAAGCAG | + |
Preference number: 6 (lower is better) Translates to: VAKQIPYGVSDA*QTLHALHVHKQ Trigger: CTGCTTATGTACGTGAAGAGCATGAAGGGTCTGGCAGGCATCAGAGACGCCATATGGGATTTGCTTAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS GCA 72 bp | TTGGGGCTCTCGGACCAGAGGAAGAAAGACATGTTCTaGTCAAAGTGGACATGCTTGTTCGATGTGGAGTTG | + |
Preference number: 6 (lower is better) Translates to: LGLSDQRKKDMF*SKWTCLFDVEL Trigger: CAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCTCTGGTCCGAGAGCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | CTTTGGAGCTGTTGGAGATGGATTCAAAGCCTTCTCTaGTCAGTGTCTGTAACCGATCCAGGAAGAGCTGCT | + |
Preference number: 6 (lower is better) Translates to: LWSCWRWIQSLL*SVSVTDPGRAA Trigger: AGCAGCTCTTCCTGGATCGGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | CCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTTaGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTCT | + |
Preference number: 6 (lower is better) Translates to: PAELRLEALWSC*RWIQSLLWSVS Trigger: AGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 72 bp | TCCTGCAGAGCTGAGACTAGAAGCTCTTTGGAGCTGTaGGAGATGGATTCAAAGCCTTCTCTGGTCAGTGTC | + |
Preference number: 6 (lower is better) Translates to: SCRAETRSSLEL*EMDSKPSLVSV Trigger: GACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTCTGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 72 bp | TTCTGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTaGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGA | + |
Preference number: 6 (lower is better) Translates to: FCSKWTCLFDVE*LVSSSCRAETR Trigger: TCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CCA 72 bp | GAGCTGAGACTAGAAGCTCTTTGGAGCTGTTGGAGATaGATTCAAAGCCTTCTCTGGTCAGTGTCTGTAACC | + |
Preference number: 6 (lower is better) Translates to: ELRLEALWSCWR*IQSLLWSVSVT Trigger: GGTTACAGACACTGACCAGAGAAGGCTTTGAATCCATCTCCAACAGCTCCAAAGAGCTTCTAGTCTCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 72 bp | AGGAAGAAAGACATGTTCTGCTCAAAGTGGACATGCTaGTTCGATGTGGAGTTGTTGGTCTCCAGCTCCTGC | + |
Preference number: 6 (lower is better) Translates to: RKKDMFCSKWTC*FDVELLVSSSC Trigger: GCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTTCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | AAAGACATGTTCTGCTCAAAGTGGACATGCTTGTTCGATGTGGAGTaGTTGGTCTCCAGCTCCTGCAGAGCTGAGACTAGAAGCTCTTTG | + |
Preference number: 6 (lower is better) Translates to: KDMFCSKWTCLFDVE*LVSSSCRAETRSSL Trigger: CAAAGAGCTTCTAGTCTCAGCTCTGCAGGAGCTGGAGACCAACAACTCCACATCGAACAAGCATGTCCACTTTGAGCAGAACATGTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 90 bp | CATTGGAAATGCCCCTTCTTTCTTTATCTGGTTTTCCTCTGTGAGTaGCTCATAGGCAGCTATGACTTGGGCCATGCAGGTCTTCAGCAT | + |
Preference number: 6 (lower is better) Translates to: HWKCPFFLYLVFLCE*LIGSYDLGHAGLQH Trigger: ATGCTGAAGACCTGCATGGCCCAAGTCATAGCTGCCTATGAGCAACTCACAGAGGAAAACCAGATAAAGAAAGAAGGGGCATTTCCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000148736.8 |
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CDS CCA 72 bp | TTTGGCAAAGCATGGCCTCCAACCCGATTAACTTCCTaGCATAAGCTAAACAGGAAGGACTGTACATACCAG | + |
Preference number: 6 (lower is better) Translates to: FGKAWPPTRLTS*HKLNRKDCTYQ Trigger: CTGGTATGTACAGTCCTTCCTGTTTAGCTTATGCCAGGAAGTTAATCGGGTTGGAGGCCATGCTTTGCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018805.15 ENSMUST00000063776.14 ENSMUST00000148736.8 |
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CDS CAA 90 bp | CTGATGCCTGCCAGACCCTTCATGCTCTTCACGTACATAAGCAGATaGCCGATCCCATTTTTAATGTCTTCATTGCACATGTCGATCCAT | + |
Preference number: 6 (lower is better) Translates to: LMPARPFMLFTYISR*PIPFLMSSLHMSIH Trigger: ATGGATCGACATGTGCAATGAAGACATTAAAAATGGGATCGGCAATCTGCTTATGTACGTGAAGAGCATGAAGGGTCTGGCAGGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |
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CDS CAA 72 bp | GCCAGACCCTTCATGCTCTTCACGTACATAAGCAGATaGCCGATCCCATTTTTAATGTCTTCATTGCACATG | + |
Preference number: 6 (lower is better) Translates to: ARPFMLFTYISR*PIPFLMSSLHM Trigger: CATGTGCAATGAAGACATTAAAAATGGGATCGGCAATCTGCTTATGTACGTGAAGAGCATGAAGGGTCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018805.15 |