Pregenerated sensors for COCH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020953Ensembl transcript IDs: ENSMUST00000085412.7, ENSMUST00000164782.10
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACGAGTTTCTAAGGGCCTaGTTATCAAGTCTCGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYEFLRA*LSSLGQ Trigger: TTGGCCGAGACTTGATAATCAGGCCCTTAGAAACTC...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGAGTTTCTAAGGGCCTaGTTATCAAGTCTCGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSVVFQPSSYENTLQKKLEFLRA*LSSLGQ Trigger: TTGGCCGAGACTTGATAATCAGGCCCTTAGAAACTC...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGCCCAATGTTAATCCATaGCAACTCTTCTTTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVPNVNP*QLFFPE Trigger: CTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGG...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR TCA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATAATGGTCAATGCAGAGTaGTTAAAGAGGGAACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HFLSPRSTCLSIHIKLRIMVNAE*LKREQC Trigger: GCACTGTTCCCTCTTTAATCACTCTGCATTGACCAT...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR GCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGTTAAAGAGGGAACAGTaGTTTGTGTGTAAGCGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRLKREQ*FVCKRQ Trigger: CTGGCGCTTACACACAAAGCACTGTTCCCTCTTTAA...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR GCA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAATCCTTGCATGGTCAATaGAGAGTGATTAAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LPLLSVVFQPSSYENTLQSLHGQ*RVIKEG Trigger: TCCCTCTTTAATCACTCTGCATTGACCATGCAAGGA...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR TCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGACAACTCTTCTTTCCTaGGTTTCTAAGGGCCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRTTLLS*VSKGLI Trigger: AATCAGGCCCTTAGAAACTCAGGAAAGAAGAGTTGT...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR TCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGCCCAATGTTAATCCATaGCAACTCTTCTTTCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRPNVNP*QLFFPE Trigger: CTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGG...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR GCA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATATCCTTGCATGGTCAATaGAGAGTGATTAAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: HFLSPRSTCLSIHIKLRISLHGQ*RVIKEG Trigger: TCCCTCTTTAATCACTCTGCATTGACCATGCAAGGA...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGGCCAATCTAAATTGTaGGCATCACATGAATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSVVFQPSSYENTLQKKLGQSKL*ASHEYS Trigger: TGAATATTCATGTGATGCTCACAATTTAGATTGGCC...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR TCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGGGCCAATCTAAATTGTaGGCATCACATGAATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRGQSKL*ASHEYS Trigger: TGAATATTCATGTGATGCTCACAATTTAGATTGGCC...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR CAA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGGCTGTTCTGTTTTCCTaGCATGGTCAATGCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLAVLFS*HGQCRV Trigger: CACTCTGCATTGACCATGCAAGGAAAACAGAACAGC...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR CAA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGAGCTTACCTATCCACTaGAATGCATATTTGAACTCC | + |
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Preference number: 3 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVSLPIH*NAYLNS Trigger: GGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCT...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR CAA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATAGCTGTTCTGTTTTCCTaGCATGGTCAATGCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HFLSPRSTCLSIHIKLRIAVLFS*HGQCRV Trigger: CACTCTGCATTGACCATGCAAGGAAAACAGAACAGC...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR GCA 72 bp | TGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATaGAGAGTGATTAAAGAGGGAACAGTGCTTTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CLKAVLFSLHGQ*RVIKEGTVLCV Trigger: CACACAAAGCACTGTTCCCTCTTTAATCACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR CAA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTCTGTGGACGCATTTTTaGACACTGGTAAGCTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: IELCSLPIHLNAYLNSQCLWTHF*TLVSYK Trigger: TTTATAGCTTACCAGTGTCAAAAAATGCGTCCACAG...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| 3UTR-3UTR CAA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTCTGTGGACGCATTTTTaGACACTGGTAAGCTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: ECIFELPMLIHDNSSFLSLWTHF*TLVSYK Trigger: TTTATAGCTTACCAGTGTCAAAAAATGCGTCCACAG...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACCAGGTCATCCAGCGGTaGCCAAGCCACACCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYQVIQR*PSHTNR Trigger: TCTGTTGGTGTGGCTTGGGCACCGCTGGATGACCTG...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACCCAATCACTCCCCTATaGACAGCAGCGCCGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYPITPL*TAAPQM Trigger: CATCTGCGGCGCTGCTGTCCATAGGGGAGTGATTGG...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACTTACCTGAAGGTGGGTaGGCTGTGGACACTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYLPEGG*AVDTAR Trigger: ACGGGCAGTGTCCACAGCCCACCCACCTTCAGGTAA...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTGTGGGCTGTGGACACTaGCCGTCCTGTGGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCVGCGH*PSCGFL Trigger: CAGGAAGCCACAGGACGGGCAGTGTCCACAGCCCAC...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACTACTGCTTTTGCCTTTaGTCACAGCGAAGGACGCGG | + |
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Preference number: 4 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYYCFCL*SQRRTR Trigger: CCGCGTCCTTCGCTGTGACCAAAGGCAAAAGCAGTA...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACCGTCCTGTGGCTTCCTaGGTACTGCTTTTGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYRPVAS*VLLLPL Trigger: CAAAGGCAAAAGCAGTACCCAGGAAGCCACAGGACG...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGTTACCTGAAGGTGGGTaGGCTGTGGACACTGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVLPEGG*AVDTAR Trigger: ACGGGCAGTGTCCACAGCCCACCCACCTTCAGGTAA...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTCAGGTCCCCCTGAGGTaGCAATCACTCCCCTATGGA | + |
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Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCQVPLR*QSLPYG Trigger: TCCATAGGGGAGTGATTGGCACCTCAGGGGGACCTG...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATAGTGGGCTGTGGACACTaGCCGTCCTGTGGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HFLSPRSTCLSIHIKLRIVGCGH*PSCGFL Trigger: CAGGAAGCCACAGGACGGGCAGTGTCCACAGCCCAC...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTTGCATCATGGGCAGCTaGAGCAGGGCCTCGGACATC | + |
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Preference number: 4 (lower is better) Translates to: LSVVFQPSSYENTLQKKLCIMGS*SRASDI Trigger: GATGTCCGAGGCCCTGCTGCAGCTGCCCATGATGCA...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTTGCATCATGGGCAGCTaGAGCAGGGCCTCGGACATC | + |
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Preference number: 4 (lower is better) Translates to: ECIFELPMLIHDNSSFLSCIMGS*SRASDI Trigger: GATGTCCGAGGCCCTGCTGCAGCTGCCCATGATGCA...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTCCAATCACTCCCCTATaGACAGCAGCGCCGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCPITPL*TAAPQM Trigger: CATCTGCGGCGCTGCTGTCCATAGGGGAGTGATTGG...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACTTTTGGGGTGTTCACTaGCTTGAACGAGACCCACGT | + |
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Preference number: 4 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYFWGVH*LERDPR Trigger: ACGTGGGTCTCGTTCAAGCCAGTGAACACCCCAAAA...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACCCAGGAAGTTTTTGTTaGGGCTGTCCCTTATGGGAC | + |
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Preference number: 4 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYPGSFC*GCPLWD Trigger: GTCCCATAAGGGACAGCCCCAACAAAAACTTCCTGG...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR TCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTCATCGGGAAAGCATCTaGGACTGGATGCCGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCHRESI*DWMPLA Trigger: TGCCAACGGCATCCAGTCTCAGATGCTTTCCCGATG...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACTCTGGCCACAATGCCTaGTTCCTCAATGTCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYSGHNA*FLNVIR Trigger: TCTGATGACATTGAGGAAGCAGGCATTGTGGCCAGA...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTACACTGCCCGTCCTGTaGCTTCCTGGGTACTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCTLPVL*LPGYCF Trigger: AAAGCAGTACCCAGGAAGCCACAGGACGGGCAGTGT...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGGTGATACCTGCATCATaGGCAGCTGCAGCAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLVIPAS*AAAAGP Trigger: AGGCCCTGCTGCAGCTGCCCATGATGCAGGTATCAC...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATACAGGTCCCCCTGAGGTaGCAATCACTCCCCTATGGA | + |
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Preference number: 4 (lower is better) Translates to: HFLSPRSTCLSIHIKLRIQVPLR*QSLPYG Trigger: TCCATAGGGGAGTGATTGGCACCTCAGGGGGACCTG...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTGAGACTGGATGCCGTTaGCATCTACCGAGGAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCETGCR*HLPRSS Trigger: ACTACTCCTCGGTAGATGCCAACGGCATCCAGTCTC...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGACACTGCCCGTCCTGTaGCTTCCTGGGTACTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLTLPVL*LPGYCF Trigger: AAAGCAGTACCCAGGAAGCCACAGGACGGGCAGTGT...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR TCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGGCAGATGCTGGACACTaGCGCATACACTATGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLADAGH*RIHYVP Trigger: GGGAACATAGTGTATGCGTCAGTGTCCAGCATCTGC...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR TCA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATACATCGGGAAAGCATCTaGGACTGGATGCCGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: HFLSPRSTCLSIHIKLRIHRESI*DWMPLA Trigger: TGCCAACGGCATCCAGTCTCAGATGCTTTCCCGATG...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGTCTGGCCACAATGCCTaGTTCCTCAATGTCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVSGHNA*FLNVIR Trigger: TCTGATGACATTGAGGAAGCAGGCATTGTGGCCAGA...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR GCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGTGCTATCTCCAACACTaGTGGAGCCGTCAATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVCYLQH*WSRQSE Trigger: TTCTGATTGACGGCTCCAGCAGTGTTGGAGATAGCA...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAGAGACTGGATGCCGTTaGCATCTACCGAGGAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LPLLSVVFQPSSYENTLQETGCR*HLPRSS Trigger: ACTACTCCTCGGTAGATGCCAACGGCATCCAGTCTC...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CCA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAACGTCCTGTGGCTTCCTaGGTACTGCTTTTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSVVFQPSSYENTLQRPVAS*VLLLPL Trigger: CAAAGGCAAAAGCAGTACCCAGGAAGCCACAGGACG...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATAGCAGATGCTGGACACTaGCGCATACACTATGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFLSPRSTCLSIHIKLRIADAGH*RIHYVP Trigger: GGGAACATAGTGTATGCGTCAGTGTCCAGCATCTGC...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTTGGCTTCCTGGGTACTaGTTTTGCCTTTGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ECIFELPMLIHDNSSFLSWLPGY*FCLWSQ Trigger: CTGTGACCAAAGGCAAAAGCAGTACCCAGGAAGCCA...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACCCAACAAAATTCTTCTaGAAATTAAATCGGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYPTKFF*KLNRRC Trigger: GCAGCGCCGATTTAATTTGCAGAAGAATTTTGTTGG...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTTGTAGCAGGTTTTGCTaGACATCATCTGTTCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCCSRFC*TSSVRA Trigger: CGCACGAACAGATGATGTGCAGCAAAACCTGCTACA...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTAACGAGACCCACGTGTaGTCCTTCTGTTCCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ECIFELPMLIHDNSSFLSNETHV*SFCSNS Trigger: GGAATTGGAACAGAAGGACCACACGTGGGTCTCGTT...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAATTTTGGGGTGTTCACTaGCTTGAACGAGACCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSVVFQPSSYENTLQFWGVH*LERDPR Trigger: ACGTGGGTCTCGTTCAAGCCAGTGAACACCCCAAAA...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTTATCTCCAACACTGCTaGAGCCGTCAATCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCYLQHC*SRQSER Trigger: CCTTTCTGATTGACGGCTCCAGCAGTGTTGGAGATA...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGCCAGGAAGTTTTTGTTaGGGCTGTCCCTTATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLPGSFC*GCPLWD Trigger: GTCCCATAAGGGACAGCCCCAACAAAAACTTCCTGG...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGTGCGCTGGTCATAAGTaGACTGTACAGCAGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLCAGHK*TVQQLS Trigger: AGATAGCTGCTGTACAGTTCACTTATGACCAGCGCA...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTGGTAAAGAAAGCGTGTaGCTCTTTGGGTTTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ECIFELPMLIHDNSSFLSGKESV*LFGFRG Trigger: GCCTCTAAACCCAAAGAGTCACACGCTTTCTTTACC...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGGTAAAGAAAGCGTGTaGCTCTTTGGGTTTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSVVFQPSSYENTLQKKLGKESV*LFGFRG Trigger: GCCTCTAAACCCAAAGAGTCACACGCTTTCTTTACC...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGTGGGCAGAGAACATCTaGTTTCTCTTTTCGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVWAENI*FLFSDI Trigger: GATATCCGAAAAGAGAAAGCAGATGTTCTCTGCCCA...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTCCTTACAGTCTTTGTTaGCAGTCTTCTTCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCPYSLC*QSSSLV Trigger: CACCAGAGAAGAAGACTGGCAACAAAGACTGTAAGG...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGAGCCTTGTCAACAAATaGAACATCTTGAACCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVSLVNK*NILNHP Trigger: GGGATGGTTCAAGATGTTGCATTTGTTGACAAGGCT...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTTGTAGCAGGTTTTGCTaGACATCATCTGTTCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSVVFQPSSYENTLQKKLCSRFC*TSSVRA Trigger: CGCACGAACAGATGATGTGCAGCAAAACCTGCTACA...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTTGCTATCTCCAACACTaGTGGAGCCGTCAATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ECIFELPMLIHDNSSFLSCYLQH*WSRQSE Trigger: TTCTGATTGACGGCTCCAGCAGTGTTGGAGATAGCA...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGAACGAGACCCACGTGTaGTCCTTCTGTTCCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRNETHV*SFCSNS Trigger: GGAATTGGAACAGAAGGACCACACGTGGGTCTCGTT...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTCCAGTTCTTCAGGAATaGGCTTGGCCACAGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: ECIFELPMLIHDNSSFLSPVLQE*AWPQKL Trigger: TAGTTTCTGTGGCCAAGCCCATTCCTGAAGAACTGG...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGGTACAGCAGCTATCTTaGCTCCAATGTCTGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVVQQLS*LQCLRF Trigger: AAATCTCAGACATTGGAGCCAAGATAGCTGCTGTAC...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGGCTGTAAAGAATTTCTaGGCAGTGTGCTTCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLAVKNF*AVCFKA Trigger: AGCCTTGAAGCACACTGCTCAGAAATTCTTTACAGC...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTAAAGGCAATGTTCACTaGGTTGTAGCAGGTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCKGNVH*VVAGFA Trigger: AGCAAAACCTGCTACAACTCAGTGAACATTGCCTTT...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAACTTGGCTCCAATGTCTaGGATTTCAAATGTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSVVFQPSSYENTLQLGSNV*DFKCLR Trigger: GCGAAGACATTTGAAATCTCAGACATTGGAGCCAAG...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGTGCGCTGGTCATAAGTaGACTGTACAGCAGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRCAGHK*TVQQLS Trigger: AGATAGCTGCTGTACAGTTCACTTATGACCAGCGCA...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGCCTTACAGTCTTTGTTaGCAGTCTTCTTCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLPYSLC*QSSSLV Trigger: CACCAGAGAAGAAGACTGGCAACAAAGACTGTAAGG...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGTCCATCAATGAGAAATaGAATGTCTGCCTTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVSINEK*NVCLTV Trigger: GACTGTAAGGCAGACATTGCATTTCTCATTGATGGA...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGAAATTAAATCGGCGCTaGCCAATATTGAAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVKLNRR*PILKLP Trigger: TGGAAGCTTCAATATTGGGCAGCGCCGATTTAATTT...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATACCAGTTCTTCAGGAATaGGCTTGGCCACAGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: HFLSPRSTCLSIHIKLRIPVLQE*AWPQKL Trigger: TAGTTTCTGTGGCCAAGCCCATTCCTGAAGAACTGG...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATATATCTCCAACACTGCTaGAGCCGTCAATCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFLSPRSTCLSIHIKLRIYLQHC*SRQSER Trigger: CCTTTCTGATTGACGGCTCCAGCAGTGTTGGAGATA...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| 3UTR CAA 72 bp | GTTATGGCTAGTGCACATAATAACAGCTGTCTGTTCTaGGCTGGTTTTAAGAAAACATCCACATGGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VMASAHNNSCLF*AGFKKTSTWVK Trigger: TTTGACCCATGTGGATGTTTTCTTAAAACCAGCCAAGAACAGACAGCTGTTATTATGTGCACTAGCCATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGCTTGGCTCCAATGTCTaGGATTTCAAATGTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRLGSNV*DFKCLR Trigger: GCGAAGACATTTGAAATCTCAGACATTGGAGCCAAG...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAATGGGCAGAGAACATCTaGTTTCTCTTTTCGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSVVFQPSSYENTLQWAENI*FLFSDI Trigger: GATATCCGAAAAGAGAAAGCAGATGTTCTCTGCCCA...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGAGAAATGCAATGTCTaGCTTACAGTCTTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVVFQPSSYENTLQKKLEKCNV*LTVFVA Trigger: GGCAACAAAGACTGTAAGGCAGACATTGCATTTCTC...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTTCCATCAATGAGAAATaGAATGTCTGCCTTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCSINEK*NVCLTV Trigger: GACTGTAAGGCAGACATTGCATTTCTCATTGATGGA...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTTCTCACACCAGTGTCTaGTGTAAAGAATTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ECIFELPMLIHDNSSFLSSHTSV*CKEFLS Trigger: GCTCAGAAATTCTTTACAGCAGACACTGGTGTGAGA...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGAGTTGTAGCAGGTTTTaGTGCACATCATCTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLSCSRF*CTSSVR Trigger: ACGAACAGATGATGTGCAGCAAAACCTGCTACAACT...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTAGTTGTAGCAGGTTTTaGTGCACATCATCTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ECIFELPMLIHDNSSFLSSCSRF*CTSSVR Trigger: ACGAACAGATGATGTGCAGCAAAACCTGCTACAACT...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAACACTACCACCACTTTTaGTATTCCTTTTCTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSVVFQPSSYENTLQHYHHF*YSFSHT Trigger: GGTGTGAGAAAAGGAATACCAAAAGTGGTGGTAGTG...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGTACAGCAGCTATCTTaGCTCCAATGTCTGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVVFQPSSYENTLQKKLVQQLS*LQCLRF Trigger: AAATCTCAGACATTGGAGCCAAGATAGCTGCTGTAC...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGAAAGGCAATGTTCACTaGGTTGTAGCAGGTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRKGNVH*VVAGFA Trigger: AGCAAAACCTGCTACAACTCAGTGAACATTGCCTTT...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTAAACAAATTCTAGCATaGGGCGGAAATTGCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ECIFELPMLIHDNSSFLSKQILA*GGNCYL Trigger: GAGATAGCAATTTCCGCCTCATGCTAGAATTTGTTT...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGAAACAAATTCTAGCATaGGGCGGAAATTGCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLKQILA*GGNCYL Trigger: GAGATAGCAATTTCCGCCTCATGCTAGAATTTGTTT...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGGAGAAATGCAATGTCTaGCTTACAGTCTTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLREKCNV*LTVFVA Trigger: GGCAACAAAGACTGTAAGGCAGACATTGCATTTCTC...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGTCTCACACCAGTGTCTaGTGTAAAGAATTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRSHTSV*CKEFLS Trigger: GCTCAGAAATTCTTTACAGCAGACACTGGTGTGAGA...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGAGCCTTGTCAACAAATaGAACATCTTGAACCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRSLVNK*NILNHP Trigger: GGGATGGTTCAAGATGTTGCATTTGTTGACAAGGCT...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGAACCTACTTCTTTTATaGCAAACAAGACATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVNLLLL*QTRHLW Trigger: CCAAAGATGTCTTGTTTGCCATAAAAGAAGTAGGTT...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGCACTACCACCACTTTTaGTATTCCTTTTCTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRHYHHF*YSFSHT Trigger: GGTGTGAGAAAAGGAATACCAAAAGTGGTGGTAGTG...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| 3UTR CAA 72 bp | ATACTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTaGCATGGTCAATGCAGAGTGATTAAAGAGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ILDLCLKAVLFS*HGQCRVIKEGT Trigger: TGTTCCCTCTTTAATCACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGAAATTAAATCGGCGCTaGCCAATATTGAAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRKLNRR*PILKLP Trigger: TGGAAGCTTCAATATTGGGCAGCGCCGATTTAATTT...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR GCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGCCAACAAAATTCTTCTaGAAATTAAATCGGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRPTKFF*KLNRRC Trigger: GCAGCGCCGATTTAATTTGCAGAAGAATTTTGTTGG...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTAGTAAAATTCTATTTTaGGGTGTTCACTGGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IELCSLPIHLNAYLNSQCSKILF*GVHWLE Trigger: TTCAAGCCAGTGAACACCCCAAAATAGAATTTTACT...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGAGTAAAATTCTATTTTaGGGTGTTCACTGGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLSKILF*GVHWLE Trigger: TTCAAGCCAGTGAACACCCCAAAATAGAATTTTACT...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CCA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGAACCTACTTCTTTTATaGCAAACAAGACATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRNLLLL*QTRHLW Trigger: CCAAAGATGTCTTGTTTGCCATAAAAGAAGTAGGTT...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS GCA 90 bp | TCTCTCGACCAGGAAGGCTGTAGACACGCACAGGTCCCCCTGAGGTaGCAATCACTCCCCTATGGACAGCAGCGCCGCAGATGCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLDQEGCRHAQVPLR*QSLPYGQQRRRCWT Trigger: TGTCCAGCATCTGCGGCGCTGCTGTCCATAGGGGAGTGATTGGCACCTCAGGGGGACCTGTGCGTGTCTACAGCCTTCCTGGTCGAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS CCA 90 bp | CCTGAAGGTGGGTGGGCTGTGGACACTGCCCGTCCTGTGGCTTCCTaGGTACTGCTTTTGCCTTTGGTCACAGCGAAGGACGCGGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: PEGGWAVDTARPVAS*VLLLPLVTAKDADH Trigger: ATGGTCCGCGTCCTTCGCTGTGACCAAAGGCAAAAGCAGTACCCAGGAAGCCACAGGACGGGCAGTGTCCACAGCCCACCCACCTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS TCA 90 bp | GTAGTTCTCTCGACCAGGAAGGCTGTAGACACGCACAGGTCCCCCTaGGGTGCCAATCACTCCCCTATGGACAGCAGCGCCGCAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLSTRKAVDTHRSP*GANHSPMDSSAADA Trigger: AGCATCTGCGGCGCTGCTGTCCATAGGGGAGTGATTGGCACCTCAGGGGGACCTGTGCGTGTCTACAGCCTTCCTGGTCGAGAGAACTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS GCA 90 bp | TCACAGCGAAGGACGCGGACCATCGGGAAAGCATCTGAGACTGGATaGCGTTGGCATCTACCGAGGAGTAGTTCTCTCGACCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQRRTRTIGKASETG*RWHLPRSSSLDQEG Trigger: GCCTTCCTGGTCGAGAGAACTACTCCTCGGTAGATGCCAACGGCATCCAGTCTCAGATGCTTTCCCGATGGTCCGCGTCCTTCGCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS CCA 90 bp | TGGACACTGCCCGTCCTGTGGCTTCCTGGGTACTGCTTTTGCCTTTaGTCACAGCGAAGGACGCGGACCATCGGGAAAGCATCTGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: WTLPVLWLPGYCFCL*SQRRTRTIGKASET Trigger: AGTCTCAGATGCTTTCCCGATGGTCCGCGTCCTTCGCTGTGACCAAAGGCAAAAGCAGTACCCAGGAAGCCACAGGACGGGCAGTGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS CCA 90 bp | CGAAGGACGCGGACCATCGGGAAAGCATCTGAGACTGGATGCCGTTaGCATCTACCGAGGAGTAGTTCTCTCGACCAGGAAGGCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRTRTIGKASETGCR*HLPRSSSLDQEGCR Trigger: TCTACAGCCTTCCTGGTCGAGAGAACTACTCCTCGGTAGATGCCAACGGCATCCAGTCTCAGATGCTTTCCCGATGGTCCGCGTCCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS GCA 90 bp | CCCCTGAGGTGCCAATCACTCCCCTATGGACAGCAGCGCCGCAGATaGTGGACACTGACGCATACACTATGTTCCCAAACACAGAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: PLRCQSLPYGQQRRR*WTLTHTLCSQTQRI Trigger: AATTCTCTGTGTTTGGGAACATAGTGTATGCGTCAGTGTCCAGCATCTGCGGCGCTGCTGTCCATAGGGGAGTGATTGGCACCTCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS CCA 90 bp | CTGAGGTGCCAATCACTCCCCTATGGACAGCAGCGCCGCAGATGCTaGACACTGACGCATACACTATGTTCCCAAACACAGAGAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRCQSLPYGQQRRRC*TLTHTLCSQTQRIP Trigger: AGGAATTCTCTGTGTTTGGGAACATAGTGTATGCGTCAGTGTCCAGCATCTGCGGCGCTGCTGTCCATAGGGGAGTGATTGGCACCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS CCA 90 bp | TCTCTGGTGTCTTCTTTAGTCTTTTACCTGAAGGTGGGTGGGCTGTaGACACTGCCCGTCCTGTGGCTTCCTGGGTACTGCTTTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLVSSLVFYLKVGGL*TLPVLWLPGYCFCL Trigger: AAGGCAAAAGCAGTACCCAGGAAGCCACAGGACGGGCAGTGTCCACAGCCCACCCACCTTCAGGTAAAAGACTAAAGAAGACACCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS GCA 90 bp | CACAGAGAATTCCTCAAGAGAGCAGCCTCCTGGGCAGAGAACATCTaGTTTCTCTTTTCGGATATCCAGGCCTCTGGTAAAGCAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HREFLKRAASWAENI*FLFSDIQASGKAGD Trigger: GTCACCTGCTTTACCAGAGGCCTGGATATCCGAAAAGAGAAAGCAGATGTTCTCTGCCCAGGAGGCTGCTCTCTTGAGGAATTCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS GCA 90 bp | CGTCAATCAGAAAGGCAATGTTCACTGAGTTGTAGCAGGTTTTGCTaGACATCATCTGTTCGTGCGTACAGAGCTTCTGCACCAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQSERQCSLSCSRFC*TSSVRAYRASAPEA Trigger: AGCCTCTGGTGCAGAAGCTCTGTACGCACGAACAGATGATGTGCAGCAAAACCTGCTACAACTCAGTGAACATTGCCTTTCTGATTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS GCA 90 bp | AGCCGTCAATCAGAAAGGCAATGTTCACTGAGTTGTAGCAGGTTTTaGTGCACATCATCTGTTCGTGCGTACAGAGCTTCTGCACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRQSERQCSLSCSRF*CTSSVRAYRASAPE Trigger: CTCTGGTGCAGAAGCTCTGTACGCACGAACAGATGATGTGCAGCAAAACCTGCTACAACTCAGTGAACATTGCCTTTCTGATTGACGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | GAACAGTGCTTTGTGTGTAAGCGCCAGGTTCTTTTATTGAGCTGTGTAGCTTACTTCCGACACACAGCCTaGTCAACAAATGCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: EQCFVCKRQVLLLSCVAYFRHTA*STNATS Trigger: AGATGTTGCATTTGTTGACAAGGCTGTGTGTCGGAA...GTAAGCTACACAGCTCAATAAAAGAACCTGGCGCTTACACACAAAGCACTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTTCCTGGGTACTGCTTTaGCCTTTGGTCACAGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSVVFQPSSYENTLQKKLSWVLL*PLVTAK Trigger: CTTCGCTGTGACCAAAGGCAAAAGCAGTACCCAGGA...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS GCA 90 bp | AGAAACTATAAATACATTGACACCAAACTCTCTGGCCACAATGCCTaGTTCCTCAATGTCATCAGAGGGCCAACCATCAATAAACACTAC | + |
|
Preference number: 5 (lower is better) Translates to: RNYKYIDTKLSGHNA*FLNVIRGPTINKHY Trigger: GTAGTGTTTATTGATGGTTGGCCCTCTGATGACATTGAGGAAGCAGGCATTGTGGCCAGAGAGTTTGGTGTCAATGTATTTATAGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATATCCTGGGTACTGCTTTaGCCTTTGGTCACAGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HFLSPRSTCLSIHIKLRISWVLL*PLVTAK Trigger: CTTCGCTGTGACCAAAGGCAAAAGCAGTACCCAGGA...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGTTCCGACACACAGCCTaGTCAACAAATGCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVFRHTA*STNATS Trigger: AGATGTTGCATTTGTTGACAAGGCTGTGTGTCGGAA...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAGCATGAGGCGGAAATaGCTATCTCCAACACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPLLSVVFQPSSYENTLQSMRRK*LSPTLL Trigger: CAGCAGTGTTGGAGATAGCAATTTCCGCCTCATGCT...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTAGCATGAGGCGGAAATaGCTATCTCCAACACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSVVFQPSSYENTLQKKLSMRRK*LSPTLL Trigger: CAGCAGTGTTGGAGATAGCAATTTCCGCCTCATGCT...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGTGTACAGCAGCTATCTaGGCTCCAATGTCTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVCTAAI*APMSEI Trigger: AATCTCAGACATTGGAGCCAAGATAGCTGCTGTACA...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGAAAGCGTGTGACTCTTaGGGTTTAGAGGCCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVKACDS*GLEAIS Trigger: AGATATGGCCTCTAAACCCAAAGAGTCACACGCTTT...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS GCA 90 bp | GTTCCAATTCCCAACATTAGTGCCACTTTCCCAACAAAATTCTTCTaGAAATTAAATCGGCGCTGCCCAATATTGAAGCTTCCATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VPIPNISATFPTKFF*KLNRRCPILKLPSM Trigger: CATTGATGGAAGCTTCAATATTGGGCAGCGCCGATTTAATTTGCAGAAGAATTTTGTTGGGAAAGTGGCACTAATGTTGGGAATTGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS CCA 90 bp | AATGTCATCAGAGGGCCAACCATCAATAAACACTACCACCACTTTTaGTATTCCTTTTCTCACACCAGTGTCTGCTGTAAAGAATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NVIRGPTINKHYHHF*YSFSHTSVCCKEFL Trigger: CAGAAATTCTTTACAGCAGACACTGGTGTGAGAAAAGGAATACCAAAAGTGGTGGTAGTGTTTATTGATGGTTGGCCCTCTGATGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTTGATCTGTGTTTAAAAGCTGTTCTGTTTTCCTTGCATGGTCAATGCAGAGTGAACAAATGCAACATCTaGAACCATCCCCAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDLCLKAVLFSLHGQCRVNKCNI*NHPQFF Trigger: GAAGAACTGGGGATGGTTCAAGATGTTGCATTTGTT...CACTCTGCATTGACCATGCAAGGAAAACAGAACAGCTTTTAAACACAGATCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTTCTTCAGGAATGGGCTaGGCCACAGAAACTATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IELCSLPIHLNAYLNSQCSSGMG*ATETIN Trigger: ATTTATAGTTTCTGTGGCCAAGCCCATTCCTGAAGA...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTTGTACAGCAGCTATCTaGGCTCCAATGTCTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ECIFELPMLIHDNSSFLSCTAAI*APMSEI Trigger: AATCTCAGACATTGGAGCCAAGATAGCTGCTGTACA...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTATAACCAGGAAGTTTTaGTTGGGGCTGTCCCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: ECIFELPMLIHDNSSFLSITRKF*LGLSLM Trigger: CATAAGGGACAGCCCCAACAAAAACTTCCTGGTTAT...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | TCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTGAAAGCGTGTGACTCTTaGGGTTTAGAGGCCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: SVWYFSHQVMKTHYKRSLKACDS*GLEAIS Trigger: AGATATGGCCTCTAAACCCAAAGAGTCACACGCTTT...CAAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAAGAAGCTTACACTACCACCACTTTaGGTATTCCTTTTCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LSVVFQPSSYENTLQKKLTLPPL*VFLFSH Trigger: GTGTGAGAAAAGGAATACCAAAAGTGGTGGTAGTGT...AAGCTTCTTTTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | ATTGAGCTGTGTAGCTTACCTATCCACTTGAATGCATATTTGAACTCCCAATGTGAAACTATAAATACATaGACACCAAACTCTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IELCSLPIHLNAYLNSQCETINT*TPNSLA Trigger: GGCCAGAGAGTTTGGTGTCAATGTATTTATAGTTTC...ACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTACACAGCTCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAATCTTCAGGAATGGGCTaGGCCACAGAAACTATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPLLSVVFQPSSYENTLQSSGMG*ATETIN Trigger: ATTTATAGTTTCTGTGGCCAAGCCCATTCCTGAAGA...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAAACAAATGCAACATCTaGAACCATCCCCAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLLSVVFQPSSYENTLQNKCNI*NHPQFF Trigger: GAAGAACTGGGGATGGTTCAAGATGTTGCATTTGTT...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | CATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGATAATAACCAGGAAGTTTTaGTTGGGGCTGTCCCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: HFLSPRSTCLSIHIKLRIITRKF*LGLSLM Trigger: CATAAGGGACAGCCCCAACAAAAACTTCCTGGTTAT...TATCCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
||
| CDS-3UTR CAA 90 bp | AAACATTTTCTTAGTCCTCGGAGTACATGCCTGTCTATACACATAAAATTAAGGACACTACCACCACTTTaGGTATTCCTTTTCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: KHFLSPRSTCLSIHIKLRTLPPL*VFLFSH Trigger: GTGTGAGAAAAGGAATACCAAAAGTGGTGGTAGTGT...CCTTAATTTTATGTGTATAGACAGGCATGTACTCCGAGGACTAAGAAAATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CAA 90 bp | GAATGCATATTTGAACTCCCAATGTTAATCCATGACAACTCTTCTTTCCTGAGTGAAACTATAAATACATaGACACCAAACTCTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ECIFELPMLIHDNSSFLSETINT*TPNSLA Trigger: GGCCAGAGAGTTTGGTGTCAATGTATTTATAGTTTC...ACTCAGGAAAGAAGAGTTGTCATGGATTAACATTGGGAGTTCAAATATGCATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS-3UTR CAA 90 bp | CTACCTTTACTCAGTGTGGTATTTCAGCCATCAAGTTATGAAAACACACTACAAGCAAACAAGACATCTTaGGCTGAAGTAAAGTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LPLLSVVFQPSSYENTLQANKTS*AEVKFF Trigger: GAAAAACTTTACTTCAGCCAAAGATGTCTTGTTTGC...TTGTAGTGTGTTTTCATAACTTGATGGCTGAAATACCACACTGAGTAAAGGTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS TCA 72 bp | TCGACCAGGAAGGCTGTAGACACGCACAGGTCCCCCTaGGGTGCCAATCACTCCCCTATGGACAGCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: STRKAVDTHRSP*GANHSPMDSSA Trigger: GGCGCTGCTGTCCATAGGGGAGTGATTGGCACCTCAGGGGGACCTGTGCGTGTCTACAGCCTTCCTGGTCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS GCA 72 bp | ACACTGCCCGTCCTGTGGCTTCCTGGGTACTGCTTTTaGCTTTGGTCACAGCGAAGGACGCGGACCATCGGG | + |
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Preference number: 6 (lower is better) Translates to: TLPVLWLPGYCF*LWSQRRTRTIG Trigger: CCCGATGGTCCGCGTCCTTCGCTGTGACCAAAGGCAAAAGCAGTACCCAGGAAGCCACAGGACGGGCAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CAA 72 bp | GCCCGTCCTGTGGCTTCCTGGGTACTGCTTTTGCCTTaGGTCACAGCGAAGGACGCGGACCATCGGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: ARPVASWVLLLP*VTAKDADHRES Trigger: GCTTTCCCGATGGTCCGCGTCCTTCGCTGTGACCAAAGGCAAAAGCAGTACCCAGGAAGCCACAGGACGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CAA 72 bp | GACACTGCCCGTCCTGTGGCTTCCTGGGTACTGCTTTaGCCTTTGGTCACAGCGAAGGACGCGGACCATCGG | + |
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Preference number: 6 (lower is better) Translates to: DTARPVASWVLL*PLVTAKDADHR Trigger: CCGATGGTCCGCGTCCTTCGCTGTGACCAAAGGCAAAAGCAGTACCCAGGAAGCCACAGGACGGGCAGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CCA 72 bp | CCCGTCCTGTGGCTTCCTGGGTACTGCTTTTGCCTTTaGTCACAGCGAAGGACGCGGACCATCGGGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: PVLWLPGYCFCL*SQRRTRTIGKA Trigger: TGCTTTCCCGATGGTCCGCGTCCTTCGCTGTGACCAAAGGCAAAAGCAGTACCCAGGAAGCCACAGGACGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS GCA 72 bp | AGGACGCGGACCATCGGGAAAGCATCTGAGACTGGATaGCGTTGGCATCTACCGAGGAGTAGTTCTCTCGAC | + |
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Preference number: 6 (lower is better) Translates to: RTRTIGKASETG*RWHLPRSSSLD Trigger: GTCGAGAGAACTACTCCTCGGTAGATGCCAACGGCATCCAGTCTCAGATGCTTTCCCGATGGTCCGCGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS GCA 72 bp | AACAGAGAAGATGGTGATACCTGCATCATGGGCAGCTaGAGCAGGGCCTCGGACATCATCATAGGACTGCCC | + |
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Preference number: 6 (lower is better) Translates to: NREDGDTCIMGS*SRASDIIIGLP Trigger: GGGCAGTCCTATGATGATGTCCGAGGCCCTGCTGCAGCTGCCCATGATGCAGGTATCACCATCTTCTCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CCA 72 bp | CGGACCATCGGGAAAGCATCTGAGACTGGATGCCGTTaGCATCTACCGAGGAGTAGTTCTCTCGACCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RTIGKASETGCR*HLPRSSSLDQE Trigger: TTCCTGGTCGAGAGAACTACTCCTCGGTAGATGCCAACGGCATCCAGTCTCAGATGCTTTCCCGATGGTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS GCA 72 bp | TGCCAATCACTCCCCTATGGACAGCAGCGCCGCAGATaGTGGACACTGACGCATACACTATGTTCCCAAACA | + |
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Preference number: 6 (lower is better) Translates to: CQSLPYGQQRRR*WTLTHTLCSQT Trigger: TGTTTGGGAACATAGTGTATGCGTCAGTGTCCAGCATCTGCGGCGCTGCTGTCCATAGGGGAGTGATTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS GCA 72 bp | GGGTTTAGAGGCCATATCTCTCAGGTCATCCAGCGGTaGCCAAGCCACACCAACAGAGAAGATGGTGATACC | + |
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Preference number: 6 (lower is better) Translates to: GFRGHISQVIQR*PSHTNREDGDT Trigger: GGTATCACCATCTTCTCTGTTGGTGTGGCTTGGGCACCGCTGGATGACCTGAGAGATATGGCCTCTAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CCA 72 bp | CAATCACTCCCCTATGGACAGCAGCGCCGCAGATGCTaGACACTGACGCATACACTATGTTCCCAAACACAG | + |
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Preference number: 6 (lower is better) Translates to: QSLPYGQQRRRC*TLTHTLCSQTQ Trigger: CTGTGTTTGGGAACATAGTGTATGCGTCAGTGTCCAGCATCTGCGGCGCTGCTGTCCATAGGGGAGTGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CAA 90 bp | GGTTCTAACCCTGTGAACTCTCTGGTAAAGAAAGCGTGTGACTCTTaGGGTTTAGAGGCCATATCTCTCAGGTCATCCAGCGGTGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: GSNPVNSLVKKACDS*GLEAISLRSSSGAQ Trigger: TTGGGCACCGCTGGATGACCTGAGAGATATGGCCTCTAAACCCAAAGAGTCACACGCTTTCTTTACCAGAGAGTTCACAGGGTTAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CAA 72 bp | CCTGTGAACTCTCTGGTAAAGAAAGCGTGTGACTCTTaGGGTTTAGAGGCCATATCTCTCAGGTCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PVNSLVKKACDS*GLEAISLRSSS Trigger: GCTGGATGACCTGAGAGATATGGCCTCTAAACCCAAAGAGTCACACGCTTTCTTTACCAGAGAGTTCACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CAA 90 bp | CCCAGTTCTTCAGGAATGGGCTTGGCCACAGAAACTATAAATACATaGACACCAAACTCTCTGGCCACAATGCCTGCTTCCTCAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSSSGMGLATETINT*TPNSLATMPASSMS Trigger: TGACATTGAGGAAGCAGGCATTGTGGCCAGAGAGTTTGGTGTCAATGTATTTATAGTTTCTGTGGCCAAGCCCATTCCTGAAGAACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS GCA 72 bp | TTGCTGCACATCATCTGTTCGTGCGTACAGAGCTTCTaGACCAGAGGCTTCACATATTTTGTAGTGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LLHIICSCVQSF*TRGFTYFVVPN Trigger: GTTTGGCACTACAAAATATGTGAAGCCTCTGGTGCAGAAGCTCTGTACGCACGAACAGATGATGTGCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CAA 72 bp | TCAGGAATGGGCTTGGCCACAGAAACTATAAATACATaGACACCAAACTCTCTGGCCACAATGCCTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SGMGLATETINT*TPNSLATMPAS Trigger: GGAAGCAGGCATTGTGGCCAGAGAGTTTGGTGTCAATGTATTTATAGTTTCTGTGGCCAAGCCCATTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS GCA 72 bp | AAATACATTGACACCAAACTCTCTGGCCACAATGCCTaGTTCCTCAATGTCATCAGAGGGCCAACCATCAAT | + |
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Preference number: 6 (lower is better) Translates to: KYIDTKLSGHNA*FLNVIRGPTIN Trigger: ATTGATGGTTGGCCCTCTGATGACATTGAGGAAGCAGGCATTGTGGCCAGAGAGTTTGGTGTCAATGTATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS GCA 72 bp | TCAGAAAGGCAATGTTCACTGAGTTGTAGCAGGTTTTaGTGCACATCATCTGTTCGTGCGTACAGAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SERQCSLSCSRF*CTSSVRAYRAS Trigger: AGAAGCTCTGTACGCACGAACAGATGATGTGCAGCAAAACCTGCTACAACTCAGTGAACATTGCCTTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS GCA 72 bp | CCCAACATTAGTGCCACTTTCCCAACAAAATTCTTCTaGAAATTAAATCGGCGCTGCCCAATATTGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: PNISATFPTKFF*KLNRRCPILKL Trigger: AAGCTTCAATATTGGGCAGCGCCGATTTAATTTGCAGAAGAATTTTGTTGGGAAAGTGGCACTAATGTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CAA 90 bp | TTCCCAACAAAATTCTTCTGCAAATTAAATCGGCGCTGCCCAATATaGAAGCTTCCATCAATGAGAAATGCAATGTCTGCCTTACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: FPTKFFCKLNRRCPI*KLPSMRNAMSALQS Trigger: AGACTGTAAGGCAGACATTGCATTTCTCATTGATGGAAGCTTCAATATTGGGCAGCGCCGATTTAATTTGCAGAAGAATTTTGTTGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS CAA 72 bp | AAATTCTTCTGCAAATTAAATCGGCGCTGCCCAATATaGAAGCTTCCATCAATGAGAAATGCAATGTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: KFFCKLNRRCPI*KLPSMRNAMSA Trigger: GGCAGACATTGCATTTCTCATTGATGGAAGCTTCAATATTGGGCAGCGCCGATTTAATTTGCAGAAGAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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| CDS TCA 72 bp | AGTGAACTGTACAGCAGCTATCTTGGCTCCAATGTCTaGGATTTCAAATGTCTTCGCTATGTTAGAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: SELYSSYLGSNV*DFKCLRYVRNK Trigger: TTTGTTTCTAACATAGCGAAGACATTTGAAATCTCAGACATTGGAGCCAAGATAGCTGCTGTACAGTTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085412.7 ENSMUST00000164782.10 |
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