Pregenerated sensors for COA8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037787Ensembl transcript IDs: ENSMUST00000040519.12, ENSMUST00000159557.2, ENSMUST00000162316.2, ENSMUST00000163220.10
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCTCCGGGTAGGCTTGCTGCTGGTGCAGGGTACACAGGGAAGTaGACTGCAGGATGGGAGCCGGCAGAGCTGCCCACACCTAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: GAPGRLAAGAGYTGK*TAGWEPAELPTPKA Trigger: AGCCTTAGGTGTGGGCAGCTCTGCCGGCTCCCATCCTGCAGTTCACTTCCCTGTGTACCCTGCACCAGCAGCAAGCCTACCCGGAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR GCA 90 bp | AGGAGCCTGTGGGAACCGATGACACACACACATGGGGCAGGAGTCTaGAGGCAGTGGGACAGTGAGGACACAGGCAGTGGGACAGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: RSLWEPMTHTHGAGV*RQWDSEDTGSGTVR Trigger: CCTCACTGTCCCACTGCCTGTGTCCTCACTGTCCCACTGCCTGCAGACTCCTGCCCCATGTGTGTGTGTCATCGGTTCCCACAGGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR TCA 90 bp | CATCGCCTGAAGATGAAGAGATGGCCAGGAGCCTGTGGGAACCGATaGCACACACACATGGGGCAGGAGTCTGCAGGCAGTGGGACAGTG | + |
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Preference number: 1 (lower is better) Translates to: HRLKMKRWPGACGNR*HTHMGQESAGSGTV Trigger: CACTGTCCCACTGCCTGCAGACTCCTGCCCCATGTGTGTGTGTCATCGGTTCCCACAGGCTCCTGGCCATCTCTTCATCTTCAGGCGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CCA 90 bp | GAGGCTGTGACATCGCCTGAAGATGAAGAGATGGCCAGGAGCCTGTaGGAACCGATGACACACACACATGGGGCAGGAGTCTGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: EAVTSPEDEEMARSL*EPMTHTHGAGVCRQ Trigger: CTGCCTGCAGACTCCTGCCCCATGTGTGTGTGTCATCGGTTCCCACAGGCTCCTGGCCATCTCTTCATCTTCAGGCGATGTCACAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CCA 90 bp | TGGAAGCTGGCCTGGGGACTGGCATCACCGGACAGAGGGATTAACTaGGAGGCTGAGGGCCAGGTTATGCAAAGCAAGAGAAGGGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: WKLAWGLASPDRGIN*EAEGQVMQSKRRVR Trigger: CCTTACCCTTCTCTTGCTTTGCATAACCTGGCCCTCAGCCTCCCAGTTAATCCCTCTGTCCGGTGATGCCAGTCCCCAGGCCAGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR GCA 90 bp | ACACGAAATCAGGGCTTCCTACCCTTGAAGTCAGTGAATTCCCCATaGCGCAGCAGCAGAACCTGCAGAACACAGTCAGCAGGTGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: TRNQGFLPLKSVNSP*RSSRTCRTQSAGGQ Trigger: CTGGCCACCTGCTGACTGTGTTCTGCAGGTTCTGCTGCTGCGGCATGGGGAATTCACTGACTTCAAGGGTAGGAAGCCCTGATTTCGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR TCA 90 bp | ACTCCAACCTTGTCCTCCCTACACCTAGTTCCTACCTCTAGCAACTaGTCAGACAGCCCTGACTTCAGAGCCCCTCTGGTCCTTGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: TPTLSSLHLVPTSSN*SDSPDFRAPLVLGS Trigger: ACTGCCAAGGACCAGAGGGGCTCTGAAGTCAGGGCTGTCTGATCAGTTGCTAGAGGTAGGAACTAGGTGTAGGGAGGACAAGGTTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CCA 90 bp | TCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACACTGTCTaGCCATCCCTCTGGGCCTCCTTCATCCTGTGTTCCCATGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SSWLQTPPICFLDTV*PSLWASFILCSHGS Trigger: GCTGCCATGGGAACACAGGATGAAGGAGGCCCAGAGGGATGGCCAGACAGTGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CCA 90 bp | GCTGATCCTGAGAGAAGGGAGTTCCCTCTTCTCCAGCAGCATCTCTaGGCCTTTCATAACCAGGGAGGGACTGTCAAAACAGGAAACCCG | + |
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Preference number: 1 (lower is better) Translates to: ADPERREFPLLQQHL*AFHNQGGTVKTGNP Trigger: CGGGTTTCCTGTTTTGACAGTCCCTCCCTGGTTATGAAAGGCCCAGAGATGCTGCTGGAGAAGAGGGAACTCCCTTCTCTCAGGATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR TCA 90 bp | GGGGCCTATCCAATCATGGCAAGACTGTCTTGGAGGGCAGAATCTTaGGACCTGAGTAGTAAGAGCATTCGCCCAGCACTCTCAAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GAYPIMARLSWRAES*DLSSKSIRPALSRL Trigger: GAGCCTTGAGAGTGCTGGGCGAATGCTCTTACTACTCAGGTCTCAAGATTCTGCCCTCCAAGACAGTCTTGCCATGATTGGATAGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159557.2 |
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| 3UTR TCA 90 bp | CTCAGACAGGCCGAGAGACACCTCACCCAAACACCCTCAGGTCAATaGTCAGACAGCAGGAACCCCATCAGTGCTTGCCAAGTTAATTCT | + |
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Preference number: 1 (lower is better) Translates to: LRQAERHLTQTPSGQ*SDSRNPISACQVNS Trigger: AGAATTAACTTGGCAAGCACTGATGGGGTTCCTGCTGTCTGATCATTGACCTGAGGGTGTTTGGGTGAGGTGTCTCTCGGCCTGTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR GCA 90 bp | TCCTATCAACTCAGAAAGCACAGACGGACACCTCGCAGCTTGAGATaGCTGCCCTGTTTGTTTAAAGCCAGAGGTTTCCTCCCCACACAG | + |
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Preference number: 1 (lower is better) Translates to: SYQLRKHRRTPRSLR*LPCLFKARGFLPTQ Trigger: CTGTGTGGGGAGGAAACCTCTGGCTTTAAACAAACAGGGCAGGCATCTCAAGCTGCGAGGTGTCCGTCTGTGCTTTCTGAGTTGATAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR TCA 90 bp | ATCCAATCATGGCAAGACTGTCTTGGAGGGCAGAATCTTGAGACCTaGGTAGTAAGAGCATTCGCCCAGCACTCTCAAGGCTCGGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: IQSWQDCLGGQNLET*VVRAFAQHSQGSEF Trigger: GAACTCCGAGCCTTGAGAGTGCTGGGCGAATGCTCTTACTACTCAGGTCTCAAGATTCTGCCCTCCAAGACAGTCTTGCCATGATTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159557.2 |
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| 3UTR TCA 90 bp | ACCTTTCCTATCAACTCAGAAAGCACAGACGGACACCTCGCAGCTTaGGATGCCTGCCCTGTTTGTTTAAAGCCAGAGGTTTCCTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: TFPINSESTDGHLAA*DACPVCLKPEVSSP Trigger: TGGGGAGGAAACCTCTGGCTTTAAACAAACAGGGCAGGCATCTCAAGCTGCGAGGTGTCCGTCTGTGCTTTCTGAGTTGATAGGAAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR TCA 90 bp | GCAGTCAGTGCTTTTACCTGTCTCTCCAGCCCTAAAGGACTCTTCTaGGAACACAGAGAGGGGCCCACTTTCTTCCCTAATTCCCTGCTA | + |
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Preference number: 1 (lower is better) Translates to: AVSAFTCLSSPKGLF*EHREGPTFFPNSLL Trigger: TAGCAGGGAATTAGGGAAGAAAGTGGGCCCCTCTCTGTGTTCTCAGAAGAGTCCTTTAGGGCTGGAGAGACAGGTAAAAGCACTGACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CCA 90 bp | GCATCAGATTTCGTTTCGGGTGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGCGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDFVSGGCEPPCGC*DLNSGPLEEQSALL Trigger: TAAGAGCGCTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCGAAACGAAATCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
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| 3UTR TCA 90 bp | AATCAAAGGACAAAGGACAAATCAAAGCTAAGCTATGAGAGGCTGTaGCATCGCCTGAAGATGAAGAGATGGCCAGGAGCCTGTGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: NQRTKDKSKLSYERL*HRLKMKRWPGACGN Trigger: GTTCCCACAGGCTCCTGGCCATCTCTTCATCTTCAGGCGATGTCACAGCCTCTCATAGCTTAGCTTTGATTTGTCCTTTGTCCTTTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CCA 90 bp | ATGCCATCTGAGAAAGTGGATCTGTCTCCATGGCTCCCTCTTTTCTaGATGCACAAACACTTACGCAGTCAAAGAAAGGGAAGAACTCCC | + |
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Preference number: 1 (lower is better) Translates to: MPSEKVDLSPWLPLF*MHKHLRSQRKGRTP Trigger: GGGAGTTCTTCCCTTTCTTTGACTGCGTAAGTGTTTGTGCATCCAGAAAAGAGGGAGCCATGGAGACAGATCCACTTTCTCAGATGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR GCA 90 bp | TTTAGGACCTCTGCTTGCTCTGGTCAACCCCGCTTGCTCAGTCCCTaGTTGCTCCAGCCCAAAGATTTATTATTATACATAAGTACACTG | + |
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Preference number: 1 (lower is better) Translates to: FRTSACSGQPRLLSP*LLQPKDLLLYISTL Trigger: CAGTGTACTTATGTATAATAATAAATCTTTGGGCTGGAGCAAGCAGGGACTGAGCAAGCGGGGTTGACCAGAGCAAGCAGAGGTCCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR GCA 90 bp | GGAATTGAATTTTTAGGACCTCTGCTTGCTCTGGTCAACCCCGCTTaGTCAGTCCCTGCTTGCTCCAGCCCAAAGATTTATTATTATACA | + |
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Preference number: 1 (lower is better) Translates to: GIEFLGPLLALVNPA*SVPACSSPKIYYYT Trigger: TGTATAATAATAAATCTTTGGGCTGGAGCAAGCAGGGACTGAGCAAGCGGGGTTGACCAGAGCAAGCAGAGGTCCTAAAAATTCAATTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR TCA 90 bp | CACAAAAGAAAATCAAAGGACAAAGGACAAATCAAAGCTAAGCTATaGGAGGCTGTGACATCGCCTGAAGATGAAGAGATGGCCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: HKRKSKDKGQIKAKL*EAVTSPEDEEMARS Trigger: GCTCCTGGCCATCTCTTCATCTTCAGGCGATGTCACAGCCTCTCATAGCTTAGCTTTGATTTGTCCTTTGTCCTTTGATTTTCTTTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CCA 90 bp | ATTACTGAAAATGTGTGGGTGTCTCACAAATGCCATCTGAGAAAGTaGATCTGTCTCCATGGCTCCCTCTTTTCTGGATGCACAAACACT | + |
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Preference number: 1 (lower is better) Translates to: ITENVWVSHKCHLRK*ICLHGSLFSGCTNT Trigger: AGTGTTTGTGCATCCAGAAAAGAGGGAGCCATGGAGACAGATCCACTTTCTCAGATGGCATTTGTGAGACACCCACACATTTTCAGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CCA 90 bp | GATGGAGAGGGAACTCAATTACATCACGTCATTACTGAAAATGTGTaGGTGTCTCACAAATGCCATCTGAGAAAGTGGATCTGTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: DGEGTQLHHVITENV*VSHKCHLRKWICLH Trigger: ATGGAGACAGATCCACTTTCTCAGATGGCATTTGTGAGACACCCACACATTTTCAGTAATGACGTGATGTAATTGAGTTCCCTCTCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCCCAAGGAGCTCTCAGACAGGCCGAGAGACACCTCACCCAAACACCCTCCAGGCAGTGGGACAGTaGGGACACAGGCAGTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LPPRSSQTGRETPHPNTLQAVGQ*GHRQWD Trigger: GTCCCACTGCCTGTGTCCTCACTGTCCCACTGCCTG...GAGGGTGTTTGGGTGAGGTGTCTCTCGGCCTGTCTGAGAGCTCCTTGGGGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCCCAAGGAGCTCTCAGACAGGCCGAGAGACACCTCACCCAAACACCCTCTCTGGTCCCATTGTCTaGGGACAGCCAACTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LPPRSSQTGRETPHPNTLSGPIV*GQPTAG Trigger: CCCAGCAGTTGGCTGTCCTCAGACAATGGGACCAGA...GAGGGTGTTTGGGTGAGGTGTCTCTCGGCCTGTCTGAGAGCTCCTTGGGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGACTGGCATCACCGGACAGAGGGATTAACTGGGAGGCTGAGGGCCAGGTTACCGAAGGCAAGGCTGTaGAGTCCAATGGCTTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GDWHHRTEGLTGRLRARLPKARL*SPMAWV Trigger: CACCCAAGCCATTGGACTGCACAGCCTTGCCTTCGG...TAACCTGGCCCTCAGCCTCCCAGTTAATCCCTCTGTCCGGTGATGCCAGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CAA 90 bp | CTAGCAACTGATCAGACAGCCCTGACTTCAGAGCCCCTCTGGTCCTaGGCAGTAGTTGGAGAGGTGACAGGGGCTCCGGGTAGGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LATDQTALTSEPLWS*AVVGEVTGAPGRLA Trigger: AGCAAGCCTACCCGGAGCCCCTGTCACCTCTCCAACTACTGCCAAGGACCAGAGGGGCTCTGAAGTCAGGGCTGTCTGATCAGTTGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGACAGCCAACTGCTGGGGCCCTGTGACCCCATGCTCCAGGTCCTTAGCATCTCAGTCCCATGCTGTTaGTGGGGTTTGGGTCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: EDSQLLGPCDPMLQVLSISVPCC*WGLGLD Trigger: GTCTAGACCCAAACCCCAGCAACAGCATGGGACTGA...GATGCTAAGGACCTGGAGCATGGGGTCACAGGGCCCCAGCAGTTGGCTGTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR CCA 90 bp | GCACGGCCCAAGGGACTGTGCTCGCTTAGTGTCCAGGGCCTCATAAACAGAACCCAGGTTCCGGTGCTGTaGGTCAAGTTCTGGTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: ARPKGLCSLSVQGLINRTQVPVL*VKFWWA Trigger: AGCCCACCAGAACTTGACCCACAGCACCGGAACCTG...GGTTCTGTTTATGAGGCCCTGGACACTAAGCGAGCACAGTCCCTTGGGCCGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCCCAAGGAGCTCTCAGACAGGCCGAGAGACACCTCACCCAAACACCCTCGATGACACACACACATaGGGCAGGAGTCTGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LPPRSSQTGRETPHPNTLDDTHT*GRSLQA Trigger: TGCCTGCAGACTCCTGCCCCATGTGTGTGTGTCATC...GAGGGTGTTTGGGTGAGGTGTCTCTCGGCCTGTCTGAGAGCTCCTTGGGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGACTGGCATCACCGGACAGAGGGATTAACTGGGAGGCTGAGGGCCAGGTTAATGGCCAGGAGCCTGTaGGAACCGATGACACACACA | + |
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Preference number: 2 (lower is better) Translates to: GDWHHRTEGLTGRLRARLMARSL*EPMTHT Trigger: TGTGTGTGTCATCGGTTCCCACAGGCTCCTGGCCAT...TAACCTGGCCCTCAGCCTCCCAGTTAATCCCTCTGTCCGGTGATGCCAGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCCCAAGGAGCTCTCAGACAGGCCGAGAGACACCTCACCCAAACACCCTCGACAGAGGGATTAACTaGGAGGCTGAGGGCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LPPRSSQTGRETPHPNTLDRGIN*EAEGQV Trigger: AACCTGGCCCTCAGCCTCCCAGTTAATCCCTCTGTC...GAGGGTGTTTGGGTGAGGTGTCTCTCGGCCTGTCTGAGAGCTCCTTGGGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR TCA 90 bp | AACACCACCAATCTGTTTCCTGGACACTGTCTGGCCATCCCTCTGGGCCTCCTTCAGGCAGTGGGACAGTaGGGACACAGGGGCTATCTG | + |
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Preference number: 2 (lower is better) Translates to: NTTNLFPGHCLAIPLGLLQAVGQ*GHRGYL Trigger: CAGATAGCCCCTGTGTCCTCACTGTCCCACTGCCTG...AAGGAGGCCCAGAGGGATGGCCAGACAGTGTCCAGGAAACAGATTGGTGGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCAGCATCTCTGGGCCTTTCATAACCAGGGAGGGACTGTCAAAACAGGAACCCATGTCTGTCTGCTaGCCCAGGGCCCAGCATGGC | + |
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Preference number: 2 (lower is better) Translates to: SSSISGPFITREGLSKQEPMSVC*PRAQHG Trigger: GCCATGCTGGGCCCTGGGTCAGCAGACAGACATGGG...TTCCTGTTTTGACAGTCCCTCCCTGGTTATGAAAGGCCCAGAGATGCTGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGACAGCCAACTGCTGGGGCCCTGTGACCCCATGCTCCAGGTCCTTAGCATCATGTGTTCAGTCCCATaGTGTTGCTGGGGTTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: EDSQLLGPCDPMLQVLSIMCSVP*CCWGLG Trigger: ACCCAAACCCCAGCAACAGCATGGGACTGAACACAT...GATGCTAAGGACCTGGAGCATGGGGTCACAGGGCCCCAGCAGTTGGCTGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGTTGGAGAGGTGACAGGGGCTCCGGGTAGGCTTGCTGCTGGTGCAGGGTACAACACAGTCAGCAGGTaGCCAGCCACTCTAACTAGT | + |
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Preference number: 2 (lower is better) Translates to: VVGEVTGAPGRLAAGAGYNTVSR*PATLTS Trigger: ACTAGTTAGAGTGGCTGGCCACCTGCTGACTGTGTT...GTACCCTGCACCAGCAGCAAGCCTACCCGGAGCCCCTGTCACCTCTCCAACTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGATGGTCGTGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACAACTGCTGGGGCCCTGTaGCCCCATGCTCCAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SRWSCHLGYKHHQSVSWTTAGAL*PHAPGP Trigger: AGGACCTGGAGCATGGGGTCACAGGGCCCCAGCAGT...TGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCATCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCATGCCATTGCTTGTTTTCCTCTAGAAAGGGGCGAGGGATTTCAGGCTATCAGGACAGCCAACTGCTaGGGCCCTGTGACCCCATGC | + |
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Preference number: 2 (lower is better) Translates to: AHAIACFPLERGEGFQAIRTANC*GPVTPC Trigger: GCATGGGGTCACAGGGCCCCAGCAGTTGGCTGTCCT...GATAGCCTGAAATCCCTCGCCCCTTTCTAGAGGAAAACAAGCAATGGCATGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCATGCCATTGCTTGTTTTCCTCTAGAAAGGGGCGAGGGATTTCAGGCTATCAGCTGGCCTGGGGACTaGCATCACCGGACAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: AHAIACFPLERGEGFQAISWPGD*HHRTEG Trigger: TCCCTCTGTCCGGTGATGCCAGTCCCCAGGCCAGCT...GATAGCCTGAAATCCCTCGCCCCTTTCTAGAGGAAAACAAGCAATGGCATGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CAA 90 bp | AGAAAGCACAGACGGACACCTCGCAGCTTGAGATGCCTGCCCTGTTaGTTTAAAGCCAGAGGTTTCCTCCCCACACAGTCACTGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: RKHRRTPRSLRCLPC*FKARGFLPTQSLVH Trigger: GTGGACCAGTGACTGTGTGGGGAGGAAACCTCTGGCTTTAAACAAACAGGGCAGGCATCTCAAGCTGCGAGGTGTCCGTCTGTGCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGTTGGAGAGGTGACAGGGGCTCCGGGTAGGCTTGCTGCTGGTGCAGGGTACGAACATAAAGGTAATTaGAGCAGGGAGGAGGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: VVGEVTGAPGRLAAGAGYEHKGN*SREEGK Trigger: TTTACCCTCCTCCCTGCTCCAATTACCTTTATGTTC...GTACCCTGCACCAGCAGCAAGCCTACCCGGAGCCCCTGTCACCTCTCCAACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CAA 90 bp | AAAGGGAAGAACTCCCTCCTGACACGAAATCAGGGCTTCCTACCCTaGAAGTCAGTGAATTCCCCATGCCGCAGCAGCAGAACCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KGKNSLLTRNQGFLP*KSVNSPCRSSRTCR Trigger: TCTGCAGGTTCTGCTGCTGCGGCATGGGGAATTCACTGACTTCAAGGGTAGGAAGCCCTGATTTCGTGTCAGGAGGGAGTTCTTCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGAACTCCCTCCTGACACGAAATCAGGGCTTCCTACCCTTGAAGTCAGTAGCATCCACTGCAACTaGATACCCCACAACAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: REELPPDTKSGLPTLEVSSIHCN*IPHNRA Trigger: GGCCCTGTTGTGGGGTATTCAGTTGCAGTGGATGCT...ACTGACTTCAAGGGTAGGAAGCCCTGATTTCGTGTCAGGAGGGAGTTCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCGTGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACACTGTCTGGAGTCTGCAGGCAGTaGGACAGTGAGGACACAGGC | + |
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Preference number: 2 (lower is better) Translates to: WSCHLGYKHHQSVSWTLSGVCRQ*DSEDTG Trigger: GCCTGTGTCCTCACTGTCCCACTGCCTGCAGACTCC...AGACAGTGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCGTGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACACTGTCTAGCATGGCTGGAAGCTaGCCTGGGGACTGGCATCAC | + |
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Preference number: 2 (lower is better) Translates to: WSCHLGYKHHQSVSWTLSSMAGS*PGDWHH Trigger: GTGATGCCAGTCCCCAGGCCAGCTTCCAGCCATGCT...AGACAGTGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
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| 3UTR CAA 90 bp | AACCTTTCCTATCAACTCAGAAAGCACAGACGGACACCTCGCAGCTaGAGATGCCTGCCCTGTTTGTTTAAAGCCAGAGGTTTCCTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: NLSYQLRKHRRTPRS*RCLPCLFKARGFLP Trigger: GGGGAGGAAACCTCTGGCTTTAAACAAACAGGGCAGGCATCTCAAGCTGCGAGGTGTCCGTCTGTGCTTTCTGAGTTGATAGGAAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGCAGCATCTCTGGGCCTTTCATAACCAGGGAGGGACTGTCAAAACAGGAAGGGCTATCTGTCCAGTaGTCCCCTTCATTAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SSSISGPFITREGLSKQEGLSVQ*SPSLTL Trigger: AAGGGTTAATGAAGGGGAGCACTGGACAGATAGCCC...TTCCTGTTTTGACAGTCCCTCCCTGGTTATGAAAGGCCCAGAGATGCTGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGCAGCATCTCTGGGCCTTTCATAACCAGGGAGGGACTGTCAAAACAGGAACTCACAAATGCCATCTaGGAAAGTGGATCTGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SSSISGPFITREGLSKQELTNAI*ESGSVS Trigger: GGAGACAGATCCACTTTCTCAGATGGCATTTGTGAG...TTCCTGTTTTGACAGTCCCTCCCTGGTTATGAAAGGCCCAGAGATGCTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGATGGTCGTGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACAAGCTATGAGAGGCTGTaGCATCGCCTGAAGATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SRWSCHLGYKHHQSVSWTSYERL*HRLKMK Trigger: CTTCATCTTCAGGCGATGTCACAGCCTCTCATAGCT...TGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCATCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCGTGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACACTGTCTTGCAGTCCAATGGCTTaGGTGCTTACCCACAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: WSCHLGYKHHQSVSWTLSCSPMA*VLTHNA Trigger: AGCATTGTGGGTAAGCACCCAAGCCATTGGACTGCA...AGACAGTGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTCGTTTTCAGGGATGTGAAAATGAACGGGACGAAGGTTTGAGCATTTGTCTGGGGCCTATCCAATCATaGCAAGACTGTCTTGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TRFQGCENERDEGLSICLGPIQS*QDCLGG Trigger: CCCTCCAAGACAGTCTTGCCATGATTGGATAGGCCC...CAGACAAATGCTCAAACCTTCGTCCCGTTCATTTTCACATCCCTGAAAACGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159557.2 |
||
| 3UTR CAA 90 bp | AGGACCTCTGCTTGCTCTGGTCAACCCCGCTTGCTCAGTCCCTGCTaGCTCCAGCCCAAAGATTTATTATTATACATAAGTACACTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: RTSACSGQPRLLSPC*LQPKDLLLYISTLY Trigger: ATACAGTGTACTTATGTATAATAATAAATCTTTGGGCTGGAGCAAGCAGGGACTGAGCAAGCGGGGTTGACCAGAGCAAGCAGAGGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CAA 90 bp | CTGTTGATTCCATTCTTGCGTTTCTTGTCTCAATTCTCTAAGTCTTaGCTCCAAGGGAGACTCGTTTTCAGGGATGTGAAAATGAACGGG | + |
|
Preference number: 2 (lower is better) Translates to: LLIPFLRFLSQFSKS*LQGRLVFRDVKMNG Trigger: CCCGTTCATTTTCACATCCCTGAAAACGAGTCTCCCTTGGAGCAAAGACTTAGAGAATTGAGACAAGAAACGCAAGAATGGAATCAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159557.2 |
||
| 3UTR TCA 72 bp | GGTAGGCTTGCTGCTGGTGCAGGGTACACAGGGAAGTaGACTGCAGGATGGGAGCCGGCAGAGCTGCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GRLAAGAGYTGK*TAGWEPAELPT Trigger: TGTGGGCAGCTCTGCCGGCTCCCATCCTGCAGTTCACTTCCCTGTGTACCCTGCACCAGCAGCAAGCCTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR GCA 72 bp | TGGGAACCGATGACACACACACATGGGGCAGGAGTCTaGAGGCAGTGGGACAGTGAGGACACAGGCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: WEPMTHTHGAGV*RQWDSEDTGSG Trigger: CCCACTGCCTGTGTCCTCACTGTCCCACTGCCTGCAGACTCCTGCCCCATGTGTGTGTGTCATCGGTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | TGGCTCTGGTCCCATTGTCTGAGGACAGCCAACTGCTaGGGCCCTGTGACCCCATGCTCCAGGTCCTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WLWSHCLRTANC*GPVTPCSRSLA Trigger: TGCTAAGGACCTGGAGCATGGGGTCACAGGGCCCCAGCAGTTGGCTGTCCTCAGACAATGGGACCAGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | CCGCAGCAGCAGAACCTGCAGAACACAGTCAGCAGGTaGCCAGCCACTCTAACTAGTCTGCAGTCACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PQQQNLQNTVSR*PATLTSLQSLG Trigger: GCCCAGTGACTGCAGACTAGTTAGAGTGGCTGGCCACCTGCTGACTGTGTTCTGCAGGTTCTGCTGCTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | CAGGGAGGGACTGTCAAAACAGGAAACCCGTTCCCCTaGCAACAGCAGCACACGCTGTTTCTCTGGAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QGGTVKTGNPFP*QQQHTLFLWRA Trigger: GGCCCTCCAGAGAAACAGCGTGTGCTGCTGTTGCCAGGGGAACGGGTTTCCTGTTTTGACAGTCCCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCGCAGCAGCAGAACCTGCAGAACACAGTCAGCAGGTGGCCAGCCACTCTAGTGGCTCTGGTCCCATaGTCTGAGGACAGCCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: MPQQQNLQNTVSRWPATLVALVP*SEDSQL Trigger: CAGTTGGCTGTCCTCAGACAATGGGACCAGAGCCAC...TAGAGTGGCTGGCCACCTGCTGACTGTGTTCTGCAGGTTCTGCTGCTGCGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | GCCTGGGGACTGGCATCACCGGACAGAGGGATTAACTaGGAGGCTGAGGGCCAGGTTATGCAAAGCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AWGLASPDRGIN*EAEGQVMQSKR Trigger: TCTCTTGCTTTGCATAACCTGGCCCTCAGCCTCCCAGTTAATCCCTCTGTCCGGTGATGCCAGTCCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | CCAATCTGTTTCCTGGACACTGTCTGGCCATCCCTCTaGGCCTCCTTCATCCTGTGTTCCCATGGCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PICFLDTVWPSL*ASFILCSHGSS Trigger: GCTGCTGCCATGGGAACACAGGATGAAGGAGGCCCAGAGGGATGGCCAGACAGTGTCCAGGAAACAGATTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | GCAACTGATCAGACAGCCCTGACTTCAGAGCCCCTCTaGTCCTTGGCAGTAGTTGGAGAGGTGACAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATDQTALTSEPL*SLAVVGEVTGA Trigger: AGCCCCTGTCACCTCTCCAACTACTGCCAAGGACCAGAGGGGCTCTGAAGTCAGGGCTGTCTGATCAGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTTGGAGAGGTGACAGGGGCTCCGGGTAGGCTTGCTGCTGGTGCAGGGTACGATGGTCGTGTCATCTaGGCTACAAACACCACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VVGEVTGAPGRLAAGAGYDGRVI*ATNTTN Trigger: ATTGGTGGTGTTTGTAGCCAAGATGACACGACCATC...GTACCCTGCACCAGCAGCAAGCCTACCCGGAGCCCCTGTCACCTCTCCAACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | AAGATGAAGAGATGGCCAGGAGCCTGTGGGAACCGATaGCACACACACATGGGGCAGGAGTCTGCAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KMKRWPGACGNR*HTHMGQESAGS Trigger: ACTGCCTGCAGACTCCTGCCCCATGTGTGTGTGTCATCGGTTCCCACAGGCTCCTGGCCATCTCTTCATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | TGCTCGCTTAGTGTCCAGGGCCTCATAAACAGAACCTaGAGCTGTGGGTCAGGTTCCGGTGCTGTGGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: CSLSVQGLINRT*SCGSGSGAVGQ Trigger: TTGACCCACAGCACCGGAACCTGACCCACAGCTCCAGGTTCTGTTTATGAGGCCCTGGACACTAAGCGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| 3UTR CCA 72 bp | ACATCGCCTGAAGATGAAGAGATGGCCAGGAGCCTGTaGGAACCGATGACACACACACATGGGGCAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TSPEDEEMARSL*EPMTHTHGAGV Trigger: GACTCCTGCCCCATGTGTGTGTGTCATCGGTTCCCACAGGCTCCTGGCCATCTCTTCATCTTCAGGCGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | GCCGAGAGACACCTCACCCAAACACCCTCAGGTCAATaGTCAGACAGCAGGAACCCCATCAGTGCTTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: AERHLTQTPSGQ*SDSRNPISACQ Trigger: TTGGCAAGCACTGATGGGGTTCCTGCTGTCTGATCATTGACCTGAGGGTGTTTGGGTGAGGTGTCTCTCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR GCA 72 bp | ACCTTACGGGAAGCCAATCATCCGAAGGCAAGGCTGTaGAGTCCAATGGCTTGGGTGCTTACCCACAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLREANHPKARL*SPMAWVLTHNA Trigger: AGCATTGTGGGTAAGCACCCAAGCCATTGGACTGCACAGCCTTGCCTTCGGATGATTGGCTTCCCGTAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | AATCATCCGAAGGCAAGGCTGTGCAGTCCAATGGCTTaGGTGCTTACCCACAATGCTCCAGGCCTTGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: NHPKARLCSPMA*VLTHNAPGLGF Trigger: GAATCCAAGGCCTGGAGCATTGTGGGTAAGCACCCAAGCCATTGGACTGCACAGCCTTGCCTTCGGATGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | CTACAAACACCACCAATCTGTTTCCTGGACACTGTCTaGCCATCCCTCTGGGCCTCCTTCATCCTGTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LQTPPICFLDTV*PSLWASFILCS Trigger: GGAACACAGGATGAAGGAGGCCCAGAGGGATGGCCAGACAGTGTCCAGGAAACAGATTGGTGGTGTTTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | TGGCAAGACTGTCTTGGAGGGCAGAATCTTGAGACCTaGGTAGTAAGAGCATTCGCCCAGCACTCTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WQDCLGGQNLET*VVRAFAQHSQG Trigger: GCCTTGAGAGTGCTGGGCGAATGCTCTTACTACTCAGGTCTCAAGATTCTGCCCTCCAAGACAGTCTTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159557.2 |
||
| 3UTR GCA 72 bp | AACAGGGCCCCAGTCATTCAGATGTGTTCAGTCCCATaGTGTTGCTGGGGTTTGGGTCTAGACCAAGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: NRAPVIQMCSVP*CCWGLGLDQDL Trigger: AAGGTCTTGGTCTAGACCCAAACCCCAGCAACAGCATGGGACTGAACACATCTGAATGACTGGGGCCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR GCA 72 bp | AAGCCTGTAAGGAAGACTTGCTGGACTCGCAGCTCATaGCATTGCTTGTTTTCCTCTAGAAAGGGGCGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KPVRKTCWTRSS*HCLFSSRKGRG Trigger: CCCTCGCCCCTTTCTAGAGGAAAACAAGCAATGGCATGAGCTGCGAGTCCAGCAAGTCTTCCTTACAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | CCAGTCATTCAGATGTGTTCAGTCCCATGCTGTTGCTaGGGTTTGGGTCTAGACCAAGACCTTACGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PVIQMCSVPCCC*GLGLDQDLTGS Trigger: GCTTCCCGTAAGGTCTTGGTCTAGACCCAAACCCCAGCAACAGCATGGGACTGAACACATCTGAATGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | TGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTaGACACTGTCTGGCCATCCCTCTGGGCCTCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CHLGYKHHQSVS*TLSGHPSGPPS Trigger: TGAAGGAGGCCCAGAGGGATGGCCAGACAGTGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | CCAATCATGGCAAGACTGTCTTGGAGGGCAGAATCTTaGGACCTGAGTAGTAAGAGCATTCGCCCAGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: PIMARLSWRAES*DLSSKSIRPAL Trigger: GAGTGCTGGGCGAATGCTCTTACTACTCAGGTCTCAAGATTCTGCCCTCCAAGACAGTCTTGCCATGATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159557.2 |
||
| 3UTR GCA 72 bp | TTTTTAGGACCTCTGCTTGCTCTGGTCAACCCCGCTTaGTCAGTCCCTGCTTGCTCCAGCCCAAAGATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: FLGPLLALVNPA*SVPACSSPKIY Trigger: ATAAATCTTTGGGCTGGAGCAAGCAGGGACTGAGCAAGCGGGGTTGACCAGAGCAAGCAGAGGTCCTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | TTCGTTTCGGGTGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FVSGGCEPPCGC*DLNSGPLEEQS Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCGAAACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| 3UTR CCA 72 bp | TGTTTAAAGCCAGAGGTTTCCTCCCCACACAGTCACTaGTCCACGGTGCTCTTAAGGAAAACTCGTTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CLKPEVSSPHSH*STVLLRKTRCS Trigger: GCTGCAACGAGTTTTCCTTAAGAGCACCGTGGACCAGTGACTGTGTGGGGAGGAAACCTCTGGCTTTAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGATGGTCGTGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACATGCTGTTGCTGGGGTTaGGGTCTAGACCAAGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: SRWSCHLGYKHHQSVSWTCCCWG*GLDQDL Trigger: AAGGTCTTGGTCTAGACCCAAACCCCAGCAACAGCA...TGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCATCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCGTGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACACTGTCTTTCAGTCCCATGCTGTaGCTGGGGTTTGGGTCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: WSCHLGYKHHQSVSWTLSFSPML*LGFGSR Trigger: TCTAGACCCAAACCCCAGCAACAGCATGGGACTGAA...AGACAGTGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | ATCAACTCAGAAAGCACAGACGGACACCTCGCAGCTTaGGATGCCTGCCCTGTTTGTTTAAAGCCAGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: INSESTDGHLAA*DACPVCLKPEV Trigger: AACCTCTGGCTTTAAACAAACAGGGCAGGCATCTCAAGCTGCGAGGTGTCCGTCTGTGCTTTCTGAGTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | GTTTTCTTCAAGGGTCCACATGATAGAAGTGCAGTGTaGACCCACCTGTATGCTGACCCTGCTCTGTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VFFKGPHDRSAV*THLYADPALLA Trigger: AGCCAACAGAGCAGGGTCAGCATACAGGTGGGTTCACACTGCACTTCTATCATGTGGACCCTTGAAGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | GCTTTTACCTGTCTCTCCAGCCCTAAAGGACTCTTCTaGGAACACAGAGAGGGGCCCACTTTCTTCCCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: AFTCLSSPKGLF*EHREGPTFFPN Trigger: ATTAGGGAAGAAAGTGGGCCCCTCTCTGTGTTCTCAGAAGAGTCCTTTAGGGCTGGAGAGACAGGTAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR GCA 72 bp | GCTGTGCAGTCCAATGGCTTGGGTGCTTACCCACAATaGTCCAGGCCTTGGATTCTATTCCCAGAAAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: AVQSNGLGAYPQ*SRPWILFPEKY Trigger: GTATTTTTCTGGGAATAGAATCCAAGGCCTGGAGCATTGTGGGTAAGCACCCAAGCCATTGGACTGCACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR GCA 72 bp | GTAAGGAAGACTTGCTGGACTCGCAGCTCATGCCATTaGTTGTTTTCCTCTAGAAAGGGGCGAGGGATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VRKTCWTRSSCH*LFSSRKGRGIS Trigger: TGAAATCCCTCGCCCCTTTCTAGAGGAAAACAAGCAATGGCATGAGCTGCGAGTCCAGCAAGTCTTCCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | ATTTTAAGAACAAAGGAAGTAGTCATAGGGTGGCTCTaGTCCCATTGTCTGAGGACAGCCAACTGCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILRTKEVVIGWL*SHCLRTANCWG Trigger: GCCCCAGCAGTTGGCTGTCCTCAGACAATGGGACCAGAGCCACCCTATGACTACTTCCTTTGTTCTTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | ACAAAGGACAAATCAAAGCTAAGCTATGAGAGGCTGTaGCATCGCCTGAAGATGAAGAGATGGCCAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TKDKSKLSYERL*HRLKMKRWPGA Trigger: GGCTCCTGGCCATCTCTTCATCTTCAGGCGATGTCACAGCCTCTCATAGCTTAGCTTTGATTTGTCCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | ACCACGTGGTTACTGGAATTTGAACTCAGGACCTTCTaGAGAGCAGTCAGTGCTTTTACCTGTCTCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TTWLLEFELRTF*RAVSAFTCLSS Trigger: GCTGGAGAGACAGGTAAAAGCACTGACTGCTCTTCAGAAGGTCCTGAGTTCAAATTCCAGTAACCACGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | AGGGTAGCTGTAAGCCACCACGTGGTTACTGGAATTTaGACTCAGGACCTTCTGAAGAGCAGTCAGTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RVAVSHHVVTGI*TQDLLKSSQCF Trigger: AAAGCACTGACTGCTCTTCAGAAGGTCCTGAGTTCAAATTCCAGTAACCACGTGGTGGCTTACAGCTACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | AATGTGTGGGTGTCTCACAAATGCCATCTGAGAAAGTaGATCTGTCTCCATGGCTCCCTCTTTTCTGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: NVWVSHKCHLRK*ICLHGSLFSGC Trigger: GCATCCAGAAAAGAGGGAGCCATGGAGACAGATCCACTTTCTCAGATGGCATTTGTGAGACACCCACACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGACTCGTTTTCAGGGATGTGAAAATGAACGGGACGAAGGTTTGAGCATTTGTCATGGCAAGACTGTCTaGGAGGGCAGAATCTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ETRFQGCENERDEGLSICHGKTV*EGRILR Trigger: TCTCAAGATTCTGCCCTCCAAGACAGTCTTGCCATG...ACAAATGCTCAAACCTTCGTCCCGTTCATTTTCACATCCCTGAAAACGAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159557.2 |
||
| 3UTR GCA 72 bp | CACGTCATTACTGAAAATGTGTGGGTGTCTCACAAATaGCATCTGAGAAAGTGGATCTGTCTCCATGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HVITENVWVSHK*HLRKWICLHGS Trigger: GGAGCCATGGAGACAGATCCACTTTCTCAGATGGCATTTGTGAGACACCCACACATTTTCAGTAATGACGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR GCA 72 bp | TCTGCTTGCTCTGGTCAACCCCGCTTGCTCAGTCCCTaGTTGCTCCAGCCCAAAGATTTATTATTATACATA | + |
|
Preference number: 3 (lower is better) Translates to: SACSGQPRLLSP*LLQPKDLLLYI Trigger: TATGTATAATAATAAATCTTTGGGCTGGAGCAAGCAGGGACTGAGCAAGCGGGGTTGACCAGAGCAAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | GCAGCCTGTTTAAAAGTCCAGATGGTCGTGTCATCTTaGCTACAAACACCACCAATCTGTTTCCTGGACACT | + |
|
Preference number: 3 (lower is better) Translates to: AACLKVQMVVSS*LQTPPICFLDT Trigger: AGTGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCATCTGGACTTTTAAACAGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CCA 72 bp | CTTATTAAGGGTAGCTGTAAGCCACCACGTGGTTACTaGAATTTGAACTCAGGACCTTCTGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LIKGSCKPPRGY*NLNSGPSEEQS Trigger: TGACTGCTCTTCAGAAGGTCCTGAGTTCAAATTCCAGTAACCACGTGGTGGCTTACAGCTACCCTTAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | GGATGGAGAGGGAACTCAATTACATCACGTCATTACTaGAAATGTGTGGGTGTCTCACAAATGCCATCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GWRGNSITSRHY*KCVGVSQMPSE Trigger: CTCAGATGGCATTTGTGAGACACCCACACATTTTCAGTAATGACGTGATGTAATTGAGTTCCCTCTCCATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | AACATGGTTGTGAGCCTTTATGTGGTTTTTGGGAATTaGATTTTTAGGACCTCTGCTTGCTCTGGTCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: NMVVSLYVVFGN*IFRTSACSGQP Trigger: GGGTTGACCAGAGCAAGCAGAGGTCCTAAAAATTCAATTCCCAAAAACCACATAAAGGCTCACAACCATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR TCA 72 bp | AAATCAAAGGACAAAGGACAAATCAAAGCTAAGCTATaGGAGGCTGTGACATCGCCTGAAGATGAAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: KSKDKGQIKAKL*EAVTSPEDEEM Trigger: CATCTCTTCATCTTCAGGCGATGTCACAGCCTCTCATAGCTTAGCTTTGATTTGTCCTTTGTCCTTTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR GCA 72 bp | CCGCTGAGCCATCTCACCAGCCCTGGTTTAAATTCTTaGAGTGAAACTTTATTCACATTTTTACACTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PLSHLTSPGLNS*SETLFTFLHCN Trigger: ATTGCAGTGTAAAAATGTGAATAAAGTTTCACTGCAAGAATTTAAACCAGGGCTGGTGAGATGGCTCAGCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| 3UTR CCA 72 bp | GGAACTCAATTACATCACGTCATTACTGAAAATGTGTaGGTGTCTCACAAATGCCATCTGAGAAAGTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: GTQLHHVITENV*VSHKCHLRKWI Trigger: GATCCACTTTCTCAGATGGCATTTGTGAGACACCCACACATTTTCAGTAATGACGTGATGTAATTGAGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CAA 72 bp | GATCAGACAGCCCTGACTTCAGAGCCCCTCTGGTCCTaGGCAGTAGTTGGAGAGGTGACAGGGGCTCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DQTALTSEPLWS*AVVGEVTGAPG Trigger: ACCCGGAGCCCCTGTCACCTCTCCAACTACTGCCAAGGACCAGAGGGGCTCTGAAGTCAGGGCTGTCTGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR CCA 90 bp | CGGCCCAAGGGACTGTGCTCGCTTAGTGTCCAGGGCCTCATAAACAGAACCTGGGGGCCTATCCAATCATaGCAAGACTGTCTTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPKGLCSLSVQGLINRTWGPIQS*QDCLGG Trigger: CCCTCCAAGACAGTCTTGCCATGATTGGATAGGCCC...CCAGGTTCTGTTTATGAGGCCCTGGACACTAAGCGAGCACAGTCCCTTGGGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS-3UTR CCA 90 bp | AGGAGCCTGTGGGAACCGATGACACACACACATGGGGCAGGAGTCTGCAGGCAGAGGACAAGTTCTGCTTaGCCCAGAACTGTTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLWEPMTHTHGAGVCRQRTSSA*PRTVDS Trigger: GGAATCAACAGTTCTGGGCCAAGCAGAACTTGTCCT...CTGCCTGCAGACTCCTGCCCCATGTGTGTGTGTCATCGGTTCCCACAGGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATACAGCCTCAGCATACAGCGTACTGAGGAGCCTGAGCCAGGCAAGCACGTCCAGCGTTGCTCTTTaGCCTGACTCAGTCCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNTASAYSVLRSLSQASTSSVAL*PDSVRK Trigger: CTTGCGGACTGAGTCAGGCCAAAGAGCAACGCTGGA...CGTGCTTGCCTGGCTCAGGCTCCTCAGTACGCTGTATGCTGAGGCTGTATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| 3UTR CAA 72 bp | AACAAAGGAAGTAGTCATAGGGTGGCTCTGGTCCCATaGTCTGAGGACAGCCAACTGCTGGGGCCCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NKGSSHRVALVP*SEDSQLLGPCD Trigger: GTCACAGGGCCCCAGCAGTTGGCTGTCCTCAGACAATGGGACCAGAGCCACCCTATGACTACTTCCTTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTTGGGTCTAGACCAAGACCTTACGGGAAGCCAATCATCCGAAGGCAAGGCGGGCCTATCCAATCATaGCAAGACTGTCTTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFGSRPRPYGKPIIRRQGGPIQS*QDCLGG Trigger: CCCTCCAAGACAGTCTTGCCATGATTGGATAGGCCC...GCCTTGCCTTCGGATGATTGGCTTCCCGTAAGGTCTTGGTCTAGACCCAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR TCA 90 bp | AATACAGCCTCAGCATACAGCGTACTGAGGAGCCTGAGCCAGGCAAGCACGGCCTTGGCCCAGAACTGTTaGTTCCATTCTTGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTASAYSVLRSLSQASTALAQNC*FHSCVS Trigger: AGAAACGCAAGAATGGAATCAACAGTTCTGGGCCAA...GGCCGTGCTTGCCTGGCTCAGGCTCCTCAGTACGCTGTATGCTGAGGCTGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS-3UTR CCA 90 bp | CAAAATACAGCCTCAGCATACAGCGTACTGAGGAGCCTGAGCCAGGCAAGCACGAGGACAAGTTCTGCTTaGCCCAGAACTGTTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QNTASAYSVLRSLSQASTRTSSA*PRTVDS Trigger: GGAATCAACAGTTCTGGGCCAAGCAGAACTTGTCCT...CGTGCTTGCCTGGCTCAGGCTCCTCAGTACGCTGTATGCTGAGGCTGTATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS-3UTR GCA 90 bp | CTAAGGCTTCCCCCAAGGAGCTCTCAGACAGGCCGAGAGACACCTCACCCAAACAATTCTCTAAGTCTTTaGTCCAAGGGAGACTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLPPRSSQTGRETPHPNNSLSL*SKGDSF Trigger: AAACGAGTCTCCCTTGGAGCAAAGACTTAGAGAATT...GTTTGGGTGAGGTGTCTCTCGGCCTGTCTGAGAGCTCCTTGGGGGAAGCCTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CAA 72 bp | ATTTTTAGGACCTCTGCTTGCTCTGGTCAACCCCGCTaGCTCAGTCCCTGCTTGCTCCAGCCCAAAGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: IFRTSACSGQPR*LSPCLLQPKDL Trigger: TAAATCTTTGGGCTGGAGCAAGCAGGGACTGAGCAAGCGGGGTTGACCAGAGCAAGCAGAGGTCCTAAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CAA 72 bp | TATCAACTCAGAAAGCACAGACGGACACCTCGCAGCTaGAGATGCCTGCCCTGTTTGTTTAAAGCCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YQLRKHRRTPRS*RCLPCLFKARG Trigger: ACCTCTGGCTTTAAACAAACAGGGCAGGCATCTCAAGCTGCGAGGTGTCCGTCTGTGCTTTCTGAGTTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGCGCTCTTAACCGCCTGCTTGTCTTCTTTTaGCTTAGCTTGCTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LLGFELRTFGRAVSALNRLLVFF*LSLLHI Trigger: GATGTGGAGCAAGCTAAGGCAAAAGAAGACAAGCAG...GCGGTTAAGAGCGCTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| 3UTR CAA 72 bp | AAGGGTAGCTGTAAGCCACCACGTGGTTACTGGAATTaGAACTCAGGACCTTCTGAAGAGCAGTCAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGSCKPPRGYWN*NSGPSEEQSVL Trigger: AAGCACTGACTGCTCTTCAGAAGGTCCTGAGTTCAAATTCCAGTAACCACGTGGTGGCTTACAGCTACCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR TCA 90 bp | GCTCATGCCATTGCTTGTTTTCCTCTAGAAAGGGGCGAGGGATTTCAGGCTATCTTGGCCCAGAACTGTTaGTTCCATTCTTGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHAIACFPLERGEGFQAILAQNC*FHSCVS Trigger: AGAAACGCAAGAATGGAATCAACAGTTCTGGGCCAA...GATAGCCTGAAATCCCTCGCCCCTTTCTAGAGGAAAACAAGCAATGGCATGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR GCA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGCGAATTCTCTAAGTCTTTaGTCCAAGGGAGACTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWDLNSGPLEEQSANSLSL*SKGDSF Trigger: AAACGAGTCTCCCTTGGAGCAAAGACTTAGAGAATT...CGCTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS-3UTR CCA 90 bp | TATTTGGCTTACACTTCCACATCACACTGTTCATCACTGGAGGAAGTCAGGACAGGGCCTATCCAATCATaGCAAGACTGTCTTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLAYTSTSHCSSLEEVRTGPIQS*QDCLGG Trigger: CCCTCCAAGACAGTCTTGCCATGATTGGATAGGCCC...TGTCCTGACTTCCTCCAGTGATGAACAGTGTGATGTGGAAGTGTAAGCCAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163220.10 |
||
| CDS-3UTR CCA 90 bp | AAAGGGTTTATTTGGCTTACACTTCCACATCACACTGTTCATCACTGGAGGAAGTCCAGCGTTGCTCTTTaGCCTGACTCAGTCCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGFIWLTLPHHTVHHWRKSSVAL*PDSVRK Trigger: CTTGCGGACTGAGTCAGGCCAAAGAGCAACGCTGGA...CTTCCTCCAGTGATGAACAGTGTGATGTGGAAGTGTAAGCCAAATAAACCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163220.10 |
||
| 3UTR CAA 72 bp | TGCAGCCTGTTTAAAAGTCCAGATGGTCGTGTCATCTaGGCTACAAACACCACCAATCTGTTTCCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: CSLFKSPDGRVI*ATNTTNLFPGH Trigger: GTGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCATCTGGACTTTTAAACAGGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| 3UTR CAA 72 bp | GCTTGCTCTGGTCAACCCCGCTTGCTCAGTCCCTGCTaGCTCCAGCCCAAAGATTTATTATTATACATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ACSGQPRLLSPC*LQPKDLLLYIS Trigger: ACTTATGTATAATAATAAATCTTTGGGCTGGAGCAAGCAGGGACTGAGCAAGCGGGGTTGACCAGAGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTTTATTTGGCTTACACTTCCACATCACACTGTTCATCACTGGAGGAAGTCTTGGCCCAGAACTGTTaGTTCCATTCTTGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVYLAYTSTSHCSSLEEVLAQNC*FHSCVS Trigger: AGAAACGCAAGAATGGAATCAACAGTTCTGGGCCAA...GACTTCCTCCAGTGATGAACAGTGTGATGTGGAAGTGTAAGCCAAATAAACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163220.10 |
||
| 3UTR CAA 72 bp | CCATTCTTGCGTTTCTTGTCTCAATTCTCTAAGTCTTaGCTCCAAGGGAGACTCGTTTTCAGGGATGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFLRFLSQFSKS*LQGRLVFRDVK Trigger: TTTCACATCCCTGAAAACGAGTCTCCCTTGGAGCAAAGACTTAGAGAATTGAGACAAGAAACGCAAGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159557.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGAAAGGGTTTATTTGGCTTACACTTCCACATCACACTGTTCATCACTGGAAATTCTCTAAGTCTTTaGTCCAAGGGAGACTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKGLFGLHFHITLFITGNSLSL*SKGDSF Trigger: AAACGAGTCTCCCTTGGAGCAAAGACTTAGAGAATT...TCCAGTGATGAACAGTGTGATGTGGAAGTGTAAGCCAAATAAACCCTTTCCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163220.10 |
||
| CDS TCA 90 bp | CTTGGAGGGCAGAATCTTGAGACCCGGCTGGACGCCGCATCCCTGTaGTCCGTAGGGCGCTCACGGGCCAACCTAACGCCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGGQNLETRLDAASL*SVGRSRANLTPPPP Trigger: CGGCGGCGGCGGCGTTAGGTTGGCCCGTGAGCGCCCTACGGATCACAGGGATGCGGCGTCCAGCCGGGTCTCAAGATTCTGCCCTCCAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040519.12 ENSMUST00000162316.2 ENSMUST00000163220.10 |
||
| CDS TCA 90 bp | GGGGCCTATCCAATCATGGCAAGACTGTCTTGGAGGGCAGAATCTTaGGACCCGGCTGGACGCCGCATCCCTGTGATCCGTAGGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GAYPIMARLSWRAES*DPAGRRIPVIRRAL Trigger: GAGCGCCCTACGGATCACAGGGATGCGGCGTCCAGCCGGGTCTCAAGATTCTGCCCTCCAAGACAGTCTTGCCATGATTGGATAGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040519.12 ENSMUST00000162316.2 ENSMUST00000163220.10 |
||
| CDS-3UTR CAA 90 bp | CAGGGCCTCATAAACAGAACCTGGAGCTGTGGGTCAGGTTCCGGTGCTGTGGGTTTGGAGGGCAGAATCTaGAGACCCGGCTGGACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QGLINRTWSCGSGSGAVGLEGRI*RPGWTP Trigger: CGGCGTCCAGCCGGGTCTCAAGATTCTGCCCTCCAA...ACCCACAGCACCGGAACCTGACCCACAGCTCCAGGTTCTGTTTATGAGGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS-3UTR CAA 90 bp | TCCAGATGGTCGTGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACATTGGAGGGCAGAATCTaGAGACCCGGCTGGACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRWSCHLGYKHHQSVSWTLEGRI*RPGWTP Trigger: CGGCGTCCAGCCGGGTCTCAAGATTCTGCCCTCCAA...TGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCATCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR CAA 90 bp | CGGCCCAAGGGACTGTGCTCGCTTAGTGTCCAGGGCCTCATAAACAGAACCTGGCTTGGCCCAGAACTGTaGATTCCATTCTTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPKGLCSLSVQGLINRTWLGPEL*IPFLRF Trigger: GAAACGCAAGAATGGAATCAACAGTTCTGGGCCAAG...CCAGGTTCTGTTTATGAGGCCCTGGACACTAAGCGAGCACAGTCCCTTGGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS-3UTR CAA 90 bp | CTGGTCCCATTGTCTGAGGACAGCCAACTGCTGGGGCCCTGTGACCCCATGCTCCTGTTGATTCCATTCTaGCGTTTCTTGTCTCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LVPLSEDSQLLGPCDPMLLLIPF*RFLSQF Trigger: GAATTGAGACAAGAAACGCAAGAATGGAATCAACAG...GAGCATGGGGTCACAGGGCCCCAGCAGTTGGCTGTCCTCAGACAATGGGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTATTTGGCTTACACTTCCACATCACACTGTTCATCACTGGAGGAAGTCAGTTGGAGGGCAGAATCTaGAGACCCGGCTGGACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GLFGLHFHITLFITGGSQLEGRI*RPGWTP Trigger: CGGCGTCCAGCCGGGTCTCAAGATTCTGCCCTCCAA...CTGACTTCCTCCAGTGATGAACAGTGTGATGTGGAAGTGTAAGCCAAATAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163220.10 |
||
| CDS-3UTR CAA 90 bp | TGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGCATGGCAAGACTGTCTaGGAGGGCAGAATCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CEPPCGCWDLNSGPLEEQHGKTV*EGRILR Trigger: TCTCAAGATTCTGCCCTCCAAGACAGTCTTGCCATG...CTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS-3UTR CAA 90 bp | AATACAGCCTCAGCATACAGCGTACTGAGGAGCCTGAGCCAGGCAAGCACGGCCCTGTTGATTCCATTCTaGCGTTTCTTGTCTCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: NTASAYSVLRSLSQASTALLIPF*RFLSQF Trigger: GAATTGAGACAAGAAACGCAAGAATGGAATCAACAG...GGCCGTGCTTGCCTGGCTCAGGCTCCTCAGTACGCTGTATGCTGAGGCTGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS-3UTR CAA 90 bp | ATGCCGCAGCAGCAGAACCTGCAGAACACAGTCAGCAGGTGGCCAGCCACTCTATCTTCTTTTTCCTTATaGAAGGACAAGTTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MPQQQNLQNTVSRWPATLSSFSL*KDKFCL Trigger: CAAGCAGAACTTGTCCTTCAATAAGGAAAAAGAAGA...TAGAGTGGCTGGCCACCTGCTGACTGTGTTCTGCAGGTTCTGCTGCTGCGGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCGTGTCATCTTGGCTACAAACACCACCAATCTGTTTCCTGGACACTGTCTCATGGCAAGACTGTCTaGGAGGGCAGAATCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WSCHLGYKHHQSVSWTLSHGKTV*EGRILR Trigger: TCTCAAGATTCTGCCCTCCAAGACAGTCTTGCCATG...AGACAGTGTCCAGGAAACAGATTGGTGGTGTTTGTAGCCAAGATGACACGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGCCATTCTTGCGTTTCTaGTCTCAATTCTCTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CEPPCGCWDLNSGPLEEQPFLRF*SQFSKS Trigger: AGACTTAGAGAATTGAGACAAGAAACGCAAGAATGG...CTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS-3UTR CAA 90 bp | GCTCATGCCATTGCTTGTTTTCCTCTAGAAAGGGGCGAGGGATTTCAGGCTATCCCATTCTTGCGTTTCTaGTCTCAATTCTCTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AHAIACFPLERGEGFQAIPFLRF*SQFSKS Trigger: AGACTTAGAGAATTGAGACAAGAAACGCAAGAATGG...GATAGCCTGAAATCCCTCGCCCCTTTCTAGAGGAAAACAAGCAATGGCATGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR CAA 90 bp | GCATCAGATCTTATTAAGGGTAGCTGTAAGCCACCACGTGGTTACTGGAATTTGCTTGGCCCAGAACTGTaGATTCCATTCTTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASDLIKGSCKPPRGYWNLLGPEL*IPFLRF Trigger: GAAACGCAAGAATGGAATCAACAGTTCTGGGCCAAG...CAAATTCCAGTAACCACGTGGTGGCTTACAGCTACCCTTAATAAGATCTGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162316.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTATTTGGCTTACACTTCCACATCACACTGTTCATCACTGGAGGAAGTCAGCTTGGCCCAGAACTGTaGATTCCATTCTTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLFGLHFHITLFITGGSQLGPEL*IPFLRF Trigger: GAAACGCAAGAATGGAATCAACAGTTCTGGGCCAAG...CTGACTTCCTCCAGTGATGAACAGTGTGATGTGGAAGTGTAAGCCAAATAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163220.10 |
||
| CDS-3UTR CAA 90 bp | GTTTATTTGGCTTACACTTCCACATCACACTGTTCATCACTGGAGGAAGTCAGGCCATTCTTGCGTTTCTaGTCTCAATTCTCTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VYLAYTSTSHCSSLEEVRPFLRF*SQFSKS Trigger: AGACTTAGAGAATTGAGACAAGAAACGCAAGAATGG...CCTGACTTCCTCCAGTGATGAACAGTGTGATGTGGAAGTGTAAGCCAAATAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163220.10 |
||
| CDS-3UTR CAA 90 bp | AAGGGTTTATTTGGCTTACACTTCCACATCACACTGTTCATCACTGGAGGAAGTCTGTTGATTCCATTCTaGCGTTTCTTGTCTCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: KGLFGLHFHITLFITGGSLLIPF*RFLSQF Trigger: GAATTGAGACAAGAAACGCAAGAATGGAATCAACAG...ACTTCCTCCAGTGATGAACAGTGTGATGTGGAAGTGTAAGCCAAATAAACCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163220.10 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGGGTTTATTTGGCTTACACTTCCACATCACACTGTTCATCACTGGAGGTCTTCTTTTTCCTTATaGAAGGACAAGTTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKGFIWLTLPHHTVHHWRSSFSL*KDKFCL Trigger: CAAGCAGAACTTGTCCTTCAATAAGGAAAAAGAAGA...CCTCCAGTGATGAACAGTGTGATGTGGAAGTGTAAGCCAAATAAACCCTTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163220.10 |
||
| CDS-3UTR CAA 90 bp | GCTGGTATAATTCAAAGTACAGACAATACAAAATACAGCCTCAGCATACAGCGTTCTTCTTTTTCCTTATaGAAGGACAAGTTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGIIQSTDNTKYSLSIQRSSFSL*KDKFCL Trigger: CAAGCAGAACTTGTCCTTCAATAAGGAAAAAGAAGA...ACGCTGTATGCTGAGGCTGTATTTTGTATTGTCTGTACTTTGAATTATACCAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040519.12 |
||
| CDS TCA 72 bp | CAGAATCTTGAGACCCGGCTGGACGCCGCATCCCTGTaGTCCGTAGGGCGCTCACGGGCCAACCTAACGCCG | + |
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Preference number: 6 (lower is better) Translates to: QNLETRLDAASL*SVGRSRANLTP Trigger: CGGCGTTAGGTTGGCCCGTGAGCGCCCTACGGATCACAGGGATGCGGCGTCCAGCCGGGTCTCAAGATTCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040519.12 ENSMUST00000162316.2 ENSMUST00000163220.10 |
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| CDS CAA 72 bp | TCCAATCATGGCAAGACTGTCTTGGAGGGCAGAATCTaGAGACCCGGCTGGACGCCGCATCCCTGTGATCCG | + |
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Preference number: 6 (lower is better) Translates to: SNHGKTVLEGRI*RPGWTPHPCDP Trigger: CGGATCACAGGGATGCGGCGTCCAGCCGGGTCTCAAGATTCTGCCCTCCAAGACAGTCTTGCCATGATTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040519.12 ENSMUST00000162316.2 ENSMUST00000163220.10 |
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| CDS CAA 90 bp | ATTGAAGGACAAGTTCTGCTTGGCCCAGAACTGTTGATTCCATTCTaGCGTTTCTTGTCTCAATTCTCTAAGTCTTTGCTCCAAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: IEGQVLLGPELLIPF*RFLSQFSKSLLQGR Trigger: TCTCCCTTGGAGCAAAGACTTAGAGAATTGAGACAAGAAACGCAAGAATGGAATCAACAGTTCTGGGCCAAGCAGAACTTGTCCTTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040519.12 ENSMUST00000162316.2 ENSMUST00000163220.10 |
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| CDS TCA 72 bp | TTATTGAAGGACAAGTTCTGCTTGGCCCAGAACTGTTaGTTCCATTCTTGCGTTTCTTGTCTCAATTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: LLKDKFCLAQNC*FHSCVSCLNSL Trigger: TAGAGAATTGAGACAAGAAACGCAAGAATGGAATCAACAGTTCTGGGCCAAGCAGAACTTGTCCTTCAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040519.12 ENSMUST00000162316.2 ENSMUST00000163220.10 |
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