Pregenerated sensors for COA7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048351Ensembl transcript IDs: ENSMUST00000131656.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTCTAGCCACTCCCAGCAGGTGACAAGCTGGAGCAGATGGCACTaGGTGACCTCCAAGGGCTCCTCTCGGGTGGGAGAGGAGCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: HSSHSQQVTSWSRWH*VTSKGSSRVGEELP Trigger: TGGCAGCTCCTCTCCCACCCGAGAGGAGCCCTTGGAGGTCACTCAGTGCCATCTGCTCCAGCTTGTCACCTGCTGGGAGTGGCTAGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 90 bp | CAGCACGAGGCCCCTGATCCCTCTAAGTCTGCGGAAAGGTCTGACTaGATCGACAAGGAGCCCACACCACACACCACGGCTGGGTTACGT | + |
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Preference number: 1 (lower is better) Translates to: QHEAPDPSKSAERSD*IDKEPTPHTTAGLR Trigger: ACGTAACCCAGCCGTGGTGTGTGGTGTGGGCTCCTTGTCGATGCAGTCAGACCTTTCCGCAGACTTAGAGGGATCAGGGGCCTCGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 90 bp | AGTGGACAGCTTCCTGTCATCATGTCCCAAATTCCTAGCTGGAGCTaGTTCCAGAGTCATCTGTCTTCCCTGGAGGAGCAGAGCCAGTCG | + |
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Preference number: 1 (lower is better) Translates to: SGQLPVIMSQIPSWS*FQSHLSSLEEQSQS Trigger: CGACTGGCTCTGCTCCTCCAGGGAAGACAGATGACTCTGGAAGCAGCTCCAGCTAGGAATTTGGGACATGATGACAGGAAGCTGTCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 90 bp | AGGCTCAGTGGACAGCTTCCTGTCATCATGTCCCAAATTCCTAGCTaGAGCTGCTTCCAGAGTCATCTGTCTTCCCTGGAGGAGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: RLSGQLPVIMSQIPS*SCFQSHLSSLEEQS Trigger: GCTCTGCTCCTCCAGGGAAGACAGATGACTCTGGAAGCAGCTCCAGCTAGGAATTTGGGACATGATGACAGGAAGCTGTCCACTGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 90 bp | AAGATGCTGTACGTTTCCTTTAAATACTGTCTCTGCAAGTGGCTGTaGCACTGTGTCCCAGTTCGTGATGCACGTCCCTGCCACTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: KMLYVSFKYCLCKWL*HCVPVRDARPCHSA Trigger: TGCAGAGTGGCAGGGACGTGCATCACGAACTGGGACACAGTGGCACAGCCACTTGCAGAGACAGTATTTAAAGGAAACGTACAGCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 90 bp | AAAAGGGCACACACACATACACACCATGATGAACACACTGCATCCTaGCAGGATCTGGAGAACAGCAGCACAGCAGATGGAAAAGCACCT | + |
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Preference number: 1 (lower is better) Translates to: KRAHTHTHHDEHTAS*QDLENSSTADGKAP Trigger: AGGTGCTTTTCCATCTGCTGTGCTGCTGTTCTCCAGATCCTGGCAGGATGCAGTGTGTTCATCATGGTGTGTATGTGTGTGTGCCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 90 bp | TACCAAAAGATGCTGTACGTTTCCTTTAAATACTGTCTCTGCAAGTaGCTGTGCCACTGTGTCCCAGTTCGTGATGCACGTCCCTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: YQKMLYVSFKYCLCK*LCHCVPVRDARPCH Trigger: GTGGCAGGGACGTGCATCACGAACTGGGACACAGTGGCACAGCCACTTGCAGAGACAGTATTTAAAGGAAACGTACAGCATCTTTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 90 bp | GGGTCATCAGGCACTGCAGAAGTGTTCCTGTGGTTTTTATGTAGTTaGCCAGGCATGATTAGCACCTTTCCAATGCTCATTGGCCTATGG | + |
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Preference number: 1 (lower is better) Translates to: GSSGTAEVFLWFLCS*PGMISTFPMLIGLW Trigger: CCATAGGCCAATGAGCATTGGAAAGGTGCTAATCATGCCTGGGCAACTACATAAAAACCACAGGAACACTTCTGCAGTGCCTGATGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 90 bp | CAAGATTACCAAAAGATGCTGTACGTTTCCTTTAAATACTGTCTCTaGAAGTGGCTGTGCCACTGTGTCCCAGTTCGTGATGCACGTCCC | + |
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Preference number: 1 (lower is better) Translates to: QDYQKMLYVSFKYCL*KWLCHCVPVRDARP Trigger: GGGACGTGCATCACGAACTGGGACACAGTGGCACAGCCACTTGCAGAGACAGTATTTAAAGGAAACGTACAGCATCTTTTGGTAATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 90 bp | TCAGGGACTAAACGTGGGTCATCAGGCACTGCAGAAGTGTTCCTGTaGTTTTTATGTAGTTGCCCAGGCATGATTAGCACCTTTCCAATG | + |
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Preference number: 1 (lower is better) Translates to: SGTKRGSSGTAEVFL*FLCSCPGMISTFPM Trigger: CATTGGAAAGGTGCTAATCATGCCTGGGCAACTACATAAAAACCACAGGAACACTTCTGCAGTGCCTGATGACCCACGTTTAGTCCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 90 bp | GCTTACTTCATGGTTAACTCTTCACGTTTTACCAATGTGAAAAGATaGCTCATGACCTGTATTCACTGTCAAGAGTACCAACAGAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: AYFMVNSSRFTNVKR*LMTCIHCQEYQQSG Trigger: ACCACTCTGTTGGTACTCTTGACAGTGAATACAGGTCATGAGCCATCTTTTCACATTGGTAAAACGTGAAGAGTTAACCATGAAGTAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR TCA 90 bp | AGTAAATATTCCATCACTGAATGTACCATTTATCCTTGTGTTTACTaGAGGACACCGTCACTGCTTCCAAGTTTTGGCAATTATAAACAG | + |
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Preference number: 1 (lower is better) Translates to: SKYSITECTIYPCVY*RTPSLLPSFGNYKQ Trigger: CTGTTTATAATTGCCAAAACTTGGAAGCAGTGACGGTGTCCTTCAGTAAACACAAGGATAAATGGTACATTCAGTGATGGAATATTTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGCGAGTGCTCCTGTCTGCTGAGCCAGCTCTGCAGTCGGCCACCTCAGATGGGTGGGAGAGGAGCTaGCAGGGTGAATCGTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: EQRVLLSAEPALQSATSDGWERS*QGESSV Trigger: AACAGACGATTCACCCTGGCAGCTCCTCTCCCACCC...ATCTGAGGTGGCCGACTGCAGAGCTGGCTCAGCAGACAGGAGCACTCGCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCACACTGCCACATAGGGGGACCAGGGTAGTGACAGACAACGGTAGAATTTCCTGCCTGGCACAGTaGTGCGTGCCTGTAACCCCA | + |
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Preference number: 2 (lower is better) Translates to: AATLPHRGTRVVTDNGRISCLAQ*CVPVTP Trigger: TGGGGTTACAGGCACGCACCACTGTGCCAGGCAGGA...AATTCTACCGTTGTCTGTCACTACCCTGGTCCCCCTATGTGGCAGTGTGGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTGCATCCTGCCAGGATCTGGAGAACAGCAGCACAGCAGATGGAAAAGCACGCAGATGGCACTGAGTaGCCTCCAAGGGCTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: TLHPARIWRTAAQQMEKHADGTE*PPRAPL Trigger: GAGAGGAGCCCTTGGAGGTCACTCAGTGCCATCTGC...GTGCTTTTCCATCTGCTGTGCTGCTGTTCTCCAGATCCTGGCAGGATGCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CCA 90 bp | GTCATCATGTCCCAAATTCCTAGCTGGAGCTGCTTCCAGAGTCATCTGTCTTCCAGGGCTCCTCTCGGGTaGGAGAGGAGCTGCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: VIMSQIPSWSCFQSHLSSRAPLG*ERSCQG Trigger: ACCCTGGCAGCTCCTCTCCCACCCGAGAGGAGCCCT...GGAAGACAGATGACTCTGGAAGCAGCTCCAGCTAGGAATTTGGGACATGATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTACCCCTGGAACTTCCTATGTGCACCAGGCTGTCTCTGCCTCCAAAGTGCAGAAGGCAGGGGGCTGTaGTCTCAACCTTCAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: MYPWNFLCAPGCLCLQSAEGRGL*SQPSKA Trigger: TGCCTTTGAAGGTTGAGAGCACAGCCCCCTGCCTTC...TGCACTTTGGAGGCAGAGACAGCCTGGTGCACATAGGAAGTTCCAGGGGTACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCAGTCTGCACCCCTCCTGTCATGCTGCAGAGGGCATCTCACACATACATGTAGTTGCCCAGGCATaGTTAGCACCTTTCCAATGC | + |
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Preference number: 2 (lower is better) Translates to: QCSLHPSCHAAEGISHIHVVAQA*LAPFQC Trigger: GCATTGGAAAGGTGCTAATCATGCCTGGGCAACTAC...ATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACTGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCAGTCTGCACCCCTCCTGTCATGCTGCAGAGGGCATCTCACACATACATAATGATAACGATGGCTaGTTCTTTCAGGCCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: QCSLHPSCHAAEGISHIHNDNDG*FFQAQA Trigger: AGCCTGGGCCTGAAAGAATCAGCCATCGTTATCATT...ATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACTGCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCCACACTGCCACATAGGGGGACCAGGGTAGTGACAGACAACGGTAGAATTAGATGGAAAAGCACCTaGAACACTGCATTCGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AATLPHRGTRVVTDNGRIRWKST*NTAFAC Trigger: ACAGGCGAATGCAGTGTTTCAGGTGCTTTTCCATCT...AATTCTACCGTTGTCTGTCACTACCCTGGTCCCCCTATGTGGCAGTGTGGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCCTGAATGGACTTCGGAAGGCAGGGGGCTGTGCTCTCAACCTTCAAAGTCCCAAATTCCTAGCTaGAGCTGCTTCCAGAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LSPEWTSEGRGLCSQPSKSQIPS*SCFQSH Trigger: ATGACTCTGGAAGCAGCTCCAGCTAGGAATTTGGGA...CTTTGAAGGTTGAGAGCACAGCCCCCTGCCTTCCGAAGTCCATTCAGGAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAATGGCCTCCAACTCAAGAGATCACCCGTCTCTGTCTCCAAATCTAAGACCGTCATCTGTCTTCCCTaGAGGAGCAGAGCCAGTCGA | + |
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Preference number: 2 (lower is better) Translates to: LNGLQLKRSPVSVSKSKTVICLP*RSRASR Trigger: TCGACTGGCTCTGCTCCTCCAGGGAAGACAGATGAC...GGTCTTAGATTTGGAGACAGAGACGGGTGATCTCTTGAGTTGGAGGCCATTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR GCA 90 bp | TCTAACCCTAAATGGCCTCCAACTCAAGAGATCACCCGTCTCTGTCTCCAAATCGAACACACTGCATCCTaGCAGGATCTGGAGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: SNPKWPPTQEITRLCLQIEHTAS*QDLENS Trigger: GCTGTTCTCCAGATCCTGGCAGGATGCAGTGTGTTC...GATTTGGAGACAGAGACGGGTGATCTCTTGAGTTGGAGGCCATTTAGGGTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCAGTCTGCACCCCTCCTGTCATGCTGCAGAGGGCATCTCACACATACATTTCATTGATTGTGTGTaGACTCCTTTGTGGGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: QCSLHPSCHAAEGISHIHFIDCV*TPLWVR Trigger: TCTAACCCACAAAGGAGTGCACACACAATCAATGAA...ATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACTGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCAGTCTGCACCCCTCCTGTCATGCTGCAGAGGGCATCTCACACATACATATGCTCATTGGCCTATaGTGTTCAATCACACCAAAT | + |
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Preference number: 2 (lower is better) Translates to: QCSLHPSCHAAEGISHIHMLIGL*CSITPN Trigger: ATTTGGTGTGATTGAACACCATAGGCCAATGAGCAT...ATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACTGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATCATGTCCCAAATTCCTAGCTGGAGCTGCTTCCAGAGTCATCTGTCTTCCAGGCTAATTTTGAACTaGAGAGATTTGTCGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VIMSQIPSWSCFQSHLSSRLILN*RDLSRG Trigger: TCCTCTCGACAAATCTCTGCAGTTCAAAATTAGCCT...GGAAGACAGATGACTCTGGAAGCAGCTCCAGCTAGGAATTTGGGACATGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAATGGCCTCCAACTCAAGAGATCACCCGTCTCTGTCTCCAAATCTAAGACCCTTTCCAATGCTCATTaGCCTATGGTGTTCAATCAC | + |
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Preference number: 2 (lower is better) Translates to: LNGLQLKRSPVSVSKSKTLSNAH*PMVFNH Trigger: GTGATTGAACACCATAGGCCAATGAGCATTGGAAAG...GGTCTTAGATTTGGAGACAGAGACGGGTGATCTCTTGAGTTGGAGGCCATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCCTAAGAAAATGCACATGCATTTTGGTACGAGCATATTTCTAATTCCCAGAGGAGAGGCTCAGTaGACAGCTTCCTGTCATCAT | + |
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Preference number: 2 (lower is better) Translates to: QAPKKMHMHFGTSIFLIPRGEAQ*TASCHH Trigger: ATGATGACAGGAAGCTGTCCACTGAGCCTCTCCTCT...GGGAATTAGAAATATGCTCGTACCAAAATGCATGTGCATTTTCTTAGGAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | GGCCCCTCTAGTCACAGCAGTGTGTGCAGTGCAGTCTaGACCCCTCCTGTCATGCTGCAGAGGGCATCTCAC | + |
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Preference number: 3 (lower is better) Translates to: GPSSHSSVCSAV*TPPVMLQRASH Trigger: GTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACTGCACTGCACACACTGCTGTGACTAGAGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | GCGTTGGTGTGTGGCCCCTCTAGTCACAGCAGTGTGTaGAGTGCAGTCTGCACCCCTCCTGTCATGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: ALVCGPSSHSSV*SAVCTPPVMLQ Trigger: CTGCAGCATGACAGGAGGGGTGCAGACTGCACTGCACACACTGCTGTGACTAGAGGGGCCACACACCAACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | CTGTGCCACTGTGTCCCAGTTCGTGATGCACGTCCCTaGCACTCTGCATTCCTCCTGCGTTGGTGTGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: LCHCVPVRDARP*HSAFLLRWCVA Trigger: GGCCACACACCAACGCAGGAGGAATGCAGAGTGGCAGGGACGTGCATCACGAACTGGGACACAGTGGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR TCA 72 bp | TCTCTGCAAGTGGCTGTGCCACTGTGTCCCAGTTCGTaGTGCACGTCCCTGCCACTCTGCATTCCTCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: SLQVAVPLCPSS*CTSLPLCIPPA Trigger: CGCAGGAGGAATGCAGAGTGGCAGGGACGTGCATCACGAACTGGGACACAGTGGCACAGCCACTTGCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | GCCCCTGATCCCTCTAAGTCTGCGGAAAGGTCTGACTaGATCGACAAGGAGCCCACACCACACACCACGGCT | + |
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Preference number: 3 (lower is better) Translates to: APDPSKSAERSD*IDKEPTPHTTA Trigger: AGCCGTGGTGTGTGGTGTGGGCTCCTTGTCGATGCAGTCAGACCTTTCCGCAGACTTAGAGGGATCAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCAGCGAGTGCTCCTGTCTGCTGAGCCAGCTCTGCAGTCGGCCACCTCAGATTTGAACTGCAGAGATTaGTCGAGAGGAGGGGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: EQRVLLSAEPALQSATSDLNCRD*SRGGEA Trigger: TGCTTCCCCTCCTCTCGACAAATCTCTGCAGTTCAA...ATCTGAGGTGGCCGACTGCAGAGCTGGCTCAGCAGACAGGAGCACTCGCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR TCA 72 bp | AGGTCCTCAGTAAGAGCAGCGAGTGCTCCTGTCTGCTaGGCCAGCTCTGCAGTCGGCCACCTCAGATTTAAC | + |
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Preference number: 3 (lower is better) Translates to: RSSVRAASAPVC*ASSAVGHLRFN Trigger: GTTAAATCTGAGGTGGCCGACTGCAGAGCTGGCTCAGCAGACAGGAGCACTCGCTGCTCTTACTGAGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | ACAGGGTCTCACTATGTACCCCTGGAACTTCCTATGTaGACCAGGCTGTCTCTGCCTCCAAAGTGCACCACC | + |
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Preference number: 3 (lower is better) Translates to: TGSHYVPLELPM*TRLSLPPKCTT Trigger: GGTGGTGCACTTTGGAGGCAGAGACAGCCTGGTGCACATAGGAAGTTCCAGGGGTACATAGTGAGACCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | GCAGTGTGTGCAGTGCAGTCTGCACCCCTCCTGTCATaGTGCAGAGGGCATCTCACACATACATTTGCCATT | + |
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Preference number: 3 (lower is better) Translates to: AVCAVQSAPLLS*CRGHLTHTFAI Trigger: AATGGCAAATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACTGCACTGCACACACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR TCA 72 bp | ACTGTCAAGAGTACCAACAGAGTGGTCTCGTGTGCCTaGAAAAATGTTCTCCCAGCCAGGTGTGGTGGCGCA | + |
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Preference number: 3 (lower is better) Translates to: TVKSTNRVVSCA*KNVLPARCGGA Trigger: TGCGCCACCACACCTGGCTGGGAGAACATTTTTTCAGGCACACGAGACCACTCTGTTGGTACTCTTGACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | CTTCCTGTCATCATGTCCCAAATTCCTAGCTGGAGCTaGTTCCAGAGTCATCTGTCTTCCCTGGAGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LPVIMSQIPSWS*FQSHLSSLEEQ Trigger: CTGCTCCTCCAGGGAAGACAGATGACTCTGGAAGCAGCTCCAGCTAGGAATTTGGGACATGATGACAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 72 bp | CTAGCTGGAGCTGCTTCCAGAGTCATCTGTCTTCCCTaGAGGAGCAGAGCCAGTCGAGAGGCTAATTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: LAGAASRVICLP*RSRASREANFE Trigger: TTCAAAATTAGCCTCTCGACTGGCTCTGCTCCTCCAGGGAAGACAGATGACTCTGGAAGCAGCTCCAGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 72 bp | CACACCATGATGAACACACTGCATCCTGCCAGGATCTaGAGAACAGCAGCACAGCAGATGGAAAAGCACCTG | + |
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Preference number: 3 (lower is better) Translates to: HTMMNTLHPARI*RTAAQQMEKHL Trigger: CAGGTGCTTTTCCATCTGCTGTGCTGCTGTTCTCCAGATCCTGGCAGGATGCAGTGTGTTCATCATGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR TCA 72 bp | GTTATCAGATCCCCCGGGACTAGACGGAGAAGTTTCTaGGCCGACATGTGGGTGATAGAACCAAACTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: VIRSPGTRRRSF*ADMWVIEPNSG Trigger: ACCTGAGTTTGGTTCTATCACCCACATGTCGGCTCAGAAACTTCTCCGTCTAGTCCCGGGGGATCTGATAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | ACAGCAGCACAGCAGATGGAAAAGCACCTGAAACACTaGATTCGCCTGTTTAACAGACTCAGTCCTGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: TAAQQMEKHLKH*IRLFNRLSPAW Trigger: CCAGGCAGGACTGAGTCTGTTAAACAGGCGAATGCAGTGTTTCAGGTGCTTTTCCATCTGCTGTGCTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | TACGTTTCCTTTAAATACTGTCTCTGCAAGTGGCTGTaGCACTGTGTCCCAGTTCGTGATGCACGTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: YVSFKYCLCKWL*HCVPVRDARPC Trigger: GCAGGGACGTGCATCACGAACTGGGACACAGTGGCACAGCCACTTGCAGAGACAGTATTTAAAGGAAACGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CAA 90 bp | ACACTGCATCCTGCCAGGATCTGGAGAACAGCAGCACAGCAGATGGAAAAGCACGTCGAGAGGCTAATTTaGAACTGCAGAGATTTGTCG | + |
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Preference number: 3 (lower is better) Translates to: TLHPARIWRTAAQQMEKHVERLI*NCRDLS Trigger: CGACAAATCTCTGCAGTTCAAAATTAGCCTCTCGAC...GTGCTTTTCCATCTGCTGTGCTGCTGTTCTCCAGATCCTGGCAGGATGCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 72 bp | AAACGTGGGTCATCAGGCACTGCAGAAGTGTTCCTGTaGTTTTTATGTAGTTGCCCAGGCATGATTAGCACC | + |
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Preference number: 3 (lower is better) Translates to: KRGSSGTAEVFL*FLCSCPGMIST Trigger: GGTGCTAATCATGCCTGGGCAACTACATAAAAACCACAGGAACACTTCTGCAGTGCCTGATGACCCACGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 72 bp | ATGCTGTACGTTTCCTTTAAATACTGTCTCTGCAAGTaGCTGTGCCACTGTGTCCCAGTTCGTGATGCACGT | + |
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Preference number: 3 (lower is better) Translates to: MLYVSFKYCLCK*LCHCVPVRDAR Trigger: ACGTGCATCACGAACTGGGACACAGTGGCACAGCCACTTGCAGAGACAGTATTTAAAGGAAACGTACAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR-3UTR CAA 90 bp | GATTGTGTGTGCACTCCTTTGTGGGTTAGAGGGCAATGTGCAGGAATCAGCTGTCCTTTCCAATGCTCATaGGCCTATGGTGTTCAATCA | + |
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Preference number: 3 (lower is better) Translates to: DCVCTPLWVRGQCAGISCPFQCS*AYGVQS Trigger: TGATTGAACACCATAGGCCAATGAGCATTGGAAAGG...ACAGCTGATTCCTGCACATTGCCCTCTAACCCACAAAGGAGTGCACACACAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | AGTGCTGGAACACAGTACTCTACCACTGAGACACACTaGCAAGCTCTAACGTACTGTTTCTTTCCTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SAGTQYSTTETH*QALTYCFFPSF Trigger: GAAGGAAGGAAAGAAACAGTACGTTAGAGCTTGGCAGTGTGTCTCAGTGGTAGAGTACTGTGTTCCAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR GCA 72 bp | GGCACTGCAGAAGTGTTCCTGTGGTTTTTATGTAGTTaGCCAGGCATGATTAGCACCTTTCCAATGCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: GTAEVFLWFLCS*PGMISTFPMLI Trigger: AATGAGCATTGGAAAGGTGCTAATCATGCCTGGGCAACTACATAAAAACCACAGGAACACTTCTGCAGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 72 bp | CACCCGTCTCTGTCTCCAAATCTAAGACCAAAAGTATaGGTCCACTTTTTGAGGATACCAGTATCCTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HPSLSPNLRPKV*VHFLRIPVSSS Trigger: ACTGGAGGATACTGGTATCCTCAAAAAGTGGACCCATACTTTTGGTCTTAGATTTGGAGACAGAGACGGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 72 bp | GTTTTTCATGACAAAGTTGTTATATCTAACCCTAAATaGCCTCCAACTCAAGAGATCACCCGTCTCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VFHDKVVISNPK*PPTQEITRLCL Trigger: GAGACAGAGACGGGTGATCTCTTGAGTTGGAGGCCATTTAGGGTTAGATATAACAACTTTGTCATGAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 72 bp | GGCATGATTAGCACCTTTCCAATGCTCATTGGCCTATaGTGTTCAATCACACCAAATACTATTTTCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GMISTFPMLIGL*CSITPNTIFKT Trigger: TGTCTTGAAAATAGTATTTGGTGTGATTGAACACCATAGGCCAATGAGCATTGGAAAGGTGCTAATCATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CCA 72 bp | ATGGTTAACTCTTCACGTTTTACCAATGTGAAAAGATaGCTCATGACCTGTATTCACTGTCAAGAGTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: MVNSSRFTNVKR*LMTCIHCQEYQ Trigger: TTGGTACTCTTGACAGTGAATACAGGTCATGAGCCATCTTTTCACATTGGTAAAACGTGAAGAGTTAACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CCA 90 bp | CAAGGGCTCCTCTCGGGTGGGAGAGGAGCTGCCAGGGTGAATCGTCTGTTGCTGACCTGCTCCTCGTCCTaGAAGTCAACCAAGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGLLSGGRGAARVNRLLLTCSSS*KSTKPA Trigger: GGCGGGCTTGGTTGACTTCCAGGACGAGGAGCAGGT...CAGCAACAGACGATTCACCCTGGCAGCTCCTCTCCCACCCGAGAGGAGCCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CCA 90 bp | CAAGGGCTCCTCTCGGGTGGGAGAGGAGCTGCCAGGGTGAATCGTCTGTTGCTGTTCCCCAGGTCAGGCTaGCCATCCTCATTGACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLLSGGRGAARVNRLLLFPRSG*PSSLTC Trigger: ACAGGTCAATGAGGATGGCCAGCCTGACCTGGGGAA...CAGCAACAGACGATTCACCCTGGCAGCTCCTCTCCCACCCGAGAGGAGCCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCGAGTGCTCCTGTCTGCTGAGCCAGCTCTGCAGTCGGCCACCTCAGATAGGAAGGACTTCACCTaGTCCTCGTCCTGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQRVLLSAEPALQSATSDRKDFT*SSSWKS Trigger: TGACTTCCAGGACGAGGAGCAGGTGAAGTCCTTCCT...ATCTGAGGTGGCCGACTGCAGAGCTGGCTCAGCAGACAGGAGCACTCGCTGCTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCATTCCTCCTGCGTTGGTGTGTGGCCCCTCTAGTCACAGCAGTGTGTGCTGCTGTAGTAGTCCCTaGCCTTCCCCAGGTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCIPPALVCGPSSHSSVCCCSSP*PSPGQA Trigger: AGCCTGACCTGGGGAAGGCCAGGGACTACTACAGCA...GCACACACTGCTGTGACTAGAGGGGCCACACACCAACGCAGGAGGAATGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR GCA 90 bp | CTCTGCATTCCTCCTGCGTTGGTGTGTGGCCCCTCTAGTCACAGCAGTGTGTGCGTTGAAGCAGCTGGCTaGATAGCCACCATCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCIPPALVCGPSSHSSVCVEAAG*IATITG Trigger: GCCTGTGATGGTGGCTATGCAGCCAGCTGCTTCAAC...GCACACACTGCTGTGACTAGAGGGGCCACACACCAACGCAGGAGGAATGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCAGTCTGCACCCCTCCTGTCATGCTGCAGAGGGCATCTCACACATACATGCAGCCTTTAGGTCCTaGGTCAGGCCACCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCSLHPSCHAAEGISHIHAAFRS*VRPPLP Trigger: TGGCAAAGGTGGCCTGACTCAGGACCTAAAGGCTGC...ATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACTGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCATTCCTCCTGCGTTGGTGTGTGGCCCCTCTAGTCACAGCAGTGTGTGCGAGTCAGGCCACCTTTaGCAGTCACGTAATAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCIPPALVCGPSSHSSVCESGHL*QSRNKP Trigger: GGGCTTATTACGTGACTGGCAAAGGTGGCCTGACTC...GCACACACTGCTGTGACTAGAGGGGCCACACACCAACGCAGGAGGAATGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR GCA 90 bp | ATGTACCCCTGGAACTTCCTATGTGCACCAGGCTGTCTCTGCCTCCAAAGTGCACTCCCAGCTTGTACATaGGGCTGGCATTGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MYPWNFLCAPGCLCLQSALPACT*GWHWRR Trigger: CCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAG...TGCACTTTGGAGGCAGAGACAGCCTGGTGCACATAGGAAGTTCCAGGGGTACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCGAGTGCTCCTGTCTGCTGAGCCAGCTCTGCAGTCGGCCACCTCAGATGGTTGGACGTTTTTCTaGTGTTCTTTGTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQRVLLSAEPALQSATSDGWTFF*CSLCSC Trigger: GCAGCTGCACAAAGAACAGCAGAAAAACGTCCAACC...ATCTGAGGTGGCCGACTGCAGAGCTGGCTCAGCAGACAGGAGCACTCGCTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGCACCCCTCCTGTCATGCTGCAGAGGGCATCTCACACATACATTTGCCAGCTTGTACATGCGGCTaGCATTGGCGCAGGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLHPSCHAAEGISHIHLPACTCG*HWRRPR Trigger: TCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGC...TGGCAAATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTGCACCCCTCCTGTCATGCTGCAGAGGGCATCTCACACATACATTTGCCACACCATCACAGGCCCTaGTGTAGTAGTCCCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHPSCHAAEGISHIHLPHHHRP*CSSPWP Trigger: AGGCCAGGGACTACTACAGCAGGGCCTGTGATGGTG...TGGCAAATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR GCA 90 bp | GAGCAGCGAGTGCTCCTGTCTGCTGAGCCAGCTCTGCAGTCGGCCACCTCAGATGAACTTCAGCACCTTTaGGGCTTCATCAAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQRVLLSAEPALQSATSDELQHL*GFIKIL Trigger: AAGAATTTTGATGAAGCCGCAAAGGTGCTGAAGTTC...ATCTGAGGTGGCCGACTGCAGAGCTGGCTCAGCAGACAGGAGCACTCGCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CCA 90 bp | GCTGCCACACTGCCACATAGGGGGACCAGGGTAGTGACAGACAACGGTAGAATTTCAGCACTTCAGCCTTaGCCTCGTCCTTATCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AATLPHRGTRVVTDNGRISALQP*PRPYQH Trigger: GTGTTGATAAGGACGAGGCCAAGGCTGAAGTGCTGA...AATTCTACCGTTGTCTGTCACTACCCTGGTCCCCCTATGTGGCAGTGTGGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| 3UTR CAA 72 bp | TTCCCTGGAGGAGCAGAGCCAGTCGAGAGGCTAATTTaGAACTGCAGAGATTTGTCGAGAGGAGGGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPGGAEPVERLI*NCRDLSRGGEA Trigger: TGCTTCCCCTCCTCTCGACAAATCTCTGCAGTTCAAAATTAGCCTCTCGACTGGCTCTGCTCCTCCAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR TCA 90 bp | GCTGCCACACTGCCACATAGGGGGACCAGGGTAGTGACAGACAACGGTAGAATTCGTATTTCTCACAGTTaGACTTCAGCACCTTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AATLPHRGTRVVTDNGRIRISHS*TSAPLR Trigger: CCGCAAAGGTGCTGAAGTTCAACTGTGAGAAATACG...AATTCTACCGTTGTCTGTCACTACCCTGGTCCCCCTATGTGGCAGTGTGGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCCTGAATGGACTTCGGAAGGCAGGGGGCTGTGCTCTCAACCTTCAAAGAACAGACTTCTTTCCTaGTTTCTCACAGGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPEWTSEGRGLCSQPSKNRLLS*FLTGHQ Trigger: CTGATGGCCTGTGAGAAACCAGGAAAGAAGTCTGTT...CTTTGAAGGTTGAGAGCACAGCCCCCTGCCTTCCGAAGTCCATTCAGGAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR GCA 90 bp | CTAAATGGCCTCCAACTCAAGAGATCACCCGTCTCTGTCTCCAAATCTAAGACCTTCTGCTGTTCTTTGTaGAGCTGCCGGGCCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNGLQLKRSPVSVSKSKTFCCSL*SCRALF Trigger: AAACAGGGCCCGGCAGCTGCACAAAGAACAGCAGAA...GGTCTTAGATTTGGAGACAGAGACGGGTGATCTCTTGAGTTGGAGGCCATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTCCTAAGAAAATGCACATGCATTTTGGTACGAGCATATTTCTAATTCCCGCTGGCCATCCTCATTaGCCTGTCCATCATGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAPKKMHMHFGTSIFLIPAGHPH*PVHHAP Trigger: TGGCGCATGATGGACAGGTCAATGAGGATGGCCAGC...GGGAATTAGAAATATGCTCGTACCAAAATGCATGTGCATTTTCTTAGGAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR GCA 90 bp | GGGACCAGGGTAGTGACAGACAACGGTAGAATTATCAGAGAAAAAGGACAAGCTTTGACCTGTCCATCATaGGCCAGTAGTCCAACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTRVVTDNGRIIREKGQALTCPS*ASSPTL Trigger: CAACGTTGGACTACTGGCGCATGATGGACAGGTCAA...AGCTTGTCCTTTTTCTCTGATAATTCTACCGTTGTCTGTCACTACCCTGGTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CCA 90 bp | CTGCCTCCATGTTCTAAGACCTCTGTTATGCAAATTAGGATACTTTCTAATTTTGCGCAGGCCCAGACATaGCCCAGGTCACAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPCSKTSVMQIRILSNFAQAQT*PRSQAF Trigger: GAAGGCCTGTGACCTGGGCCATGTCTGGGCCTGCGC...AAAATTAGAAAGTATCCTAATTTGCATAACAGAGGTCTTAGAACATGGAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGCACCCCTCCTGTCATGCTGCAGAGGGCATCTCACACATACATTTGCCACCAAATGTTAGAGGTTaGACGTTTTTCTGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHPSCHAAEGISHIHLPPNVRG*TFFCCS Trigger: AGAACAGCAGAAAAACGTCCAACCTCTAACATTTGG...TGGCAAATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGCGAGTGCTCCTGTCTGCTGAGCCAGCTCTGCAGTCGGCCACCTCAGATGGCTGGCCATCCTCATaGACCTGTCCATCATGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: EQRVLLSAEPALQSATSDGWPSS*TCPSCA Trigger: GGCGCATGATGGACAGGTCAATGAGGATGGCCAGCC...ATCTGAGGTGGCCGACTGCAGAGCTGGCTCAGCAGACAGGAGCACTCGCTGCTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS GCA 90 bp | CAGCCTTGGCCTCGTCCTTATCAACACCATCTCCCAGCTTGTACATaGGGCTGGCATTGGCGCAGGCCCAGACATGGCCCAGGTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QPWPRPYQHHLPACT*GWHWRRPRHGPGHR Trigger: CCTGTGACCTGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGATGGTGTTGATAAGGACGAGGCCAAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS CCA 90 bp | TGGCCTCGTCCTTATCAACACCATCTCCCAGCTTGTACATGCGGCTaGCATTGGCGCAGGCCCAGACATGGCCCAGGTCACAGGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WPRPYQHHLPACTCG*HWRRPRHGPGHRPS Trigger: TGAAGGCCTGTGACCTGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGATGGTGTTGATAAGGACGAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS TCA 90 bp | GGCATTGGCGCAGGCCCAGACATGGCCCAGGTCACAGGCCTTCATTaGATATTTACACGCCAGACCCATGTCCTTAGGAAAGCCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GIGAGPDMAQVTGLH*IFTRQTHVLRKARG Trigger: GCCCCTGGCTTTCCTAAGGACATGGGTCTGGCGTGTAAATATTCAATGAAGGCCTGTGACCTGGGCCATGTCTGGGCCTGCGCCAATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS CCA 90 bp | TCTCCCAGCTTGTACATGCGGCTGGCATTGGCGCAGGCCCAGACATaGCCCAGGTCACAGGCCTTCATTGAATATTTACACGCCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSLYMRLALAQAQT*PRSQAFIEYLHARP Trigger: GGGTCTGGCGTGTAAATATTCAATGAAGGCCTGTGACCTGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGCGAGTGCTCCTGTCTGCTGAGCCAGCTCTGCAGTCGGCCACCTCAGATTTCAGCACTTCAGCCTaGGCCTCGTCCTTATCAACA | + |
|
Preference number: 5 (lower is better) Translates to: EQRVLLSAEPALQSATSDFSTSA*ASSLST Trigger: TGTTGATAAGGACGAGGCCAAGGCTGAAGTGCTGAA...ATCTGAGGTGGCCGACTGCAGAGCTGGCTCAGCAGACAGGAGCACTCGCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS CCA 90 bp | CGTCCTTATCAACACCATCTCCCAGCTTGTACATGCGGCTGGCATTaGCGCAGGCCCAGACATGGCCCAGGTCACAGGCCTTCATTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RPYQHHLPACTCGWH*RRPRHGPGHRPSLN Trigger: ATTCAATGAAGGCCTGTGACCTGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGATGGTGTTGATAAGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CAA 90 bp | CAGTGCAGTCTGCACCCCTCCTGTCATGCTGCAGAGGGCATCTCACACATACATCTTCTCGCGGTAGCATaGGTAGTGACACTCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: QCSLHPSCHAAEGISHIHLLAVA*VVTLHL Trigger: GAGGTGGAGTGTCACTACCAATGCTACCGCGAGAAG...ATGTATGTGTGAGATGCCCTCTGCAGCATGACAGGAGGGGTGCAGACTGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS GCA 90 bp | GAAAGCAGGAAGAGGCAGCCTTTAGGTCCTGAGTCAGGCCACCTTTaGCAGTCACGTAATAAGCCCCCAGCTTGTAACAGCTGTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: ESRKRQPLGPESGHL*QSRNKPPACNSCHH Trigger: ATGGTGACAGCTGTTACAAGCTGGGGGCTTATTACGTGACTGGCAAAGGTGGCCTGACTCAGGACCTAAAGGCTGCCTCTTCCTGCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS TCA 90 bp | CCATCCTCATTGACCTGTCCATCATGCGCCAGTAGTCCAACGTTGTaGCAGGATTCAACAGACTTCTTTCCTGGTTTCTCACAGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PSSLTCPSCASSPTL*QDSTDFFPGFSQAI Trigger: GATGGCCTGTGAGAAACCAGGAAAGAAGTCTGTTGAATCCTGTCACAACGTTGGACTACTGGCGCATGATGGACAGGTCAATGAGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS-3UTR CAA 90 bp | GATTGTGTGTGCACTCCTTTGTGGGTTAGAGGGCAATGTGCAGGAATCAGCTGTCCGTATTTCTCACAGTaGAACTTCAGCACCTTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: DCVCTPLWVRGQCAGISCPYFSQ*NFSTFA Trigger: CGCAAAGGTGCTGAAGTTCAACTGTGAGAAATACGG...ACAGCTGATTCCTGCACATTGCCCTCTAACCCACAAAGGAGTGCACACACAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS GCA 90 bp | GCTGTCACCATGCCCGTATTTCTCACAGTTGAACTTCAGCACCTTTaGGGCTTCATCAAAATTCTTTTGGATTCCTTCCAGATAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVTMPVFLTVELQHL*GFIKILLDSFQIVH Trigger: GTGGACTATCTGGAAGGAATCCAAAAGAATTTTGATGAAGCCGCAAAGGTGCTGAAGTTCAACTGTGAGAAATACGGGCATGGTGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS CCA 72 bp | CAACACCATCTCCCAGCTTGTACATGCGGCTGGCATTaGCGCAGGCCCAGACATGGCCCAGGTCACAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QHHLPACTCGWH*RRPRHGPGHRP Trigger: AGGCCTGTGACCTGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGATGGTGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS CAA 90 bp | AGCACTTCAGCCTTGGCCTCGTCCTTATCAACACCATCTCCCAGCTaGTACATGCGGCTGGCATTGGCGCAGGCCCAGACATGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STSALASSLSTPSPS*YMRLALAQAQTWPR Trigger: CCTGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGATGGTGTTGATAAGGACGAGGCCAAGGCTGAAGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS TCA 72 bp | CCCTGGCCTTCCCCAGGTCAGGCTGGCCATCCTCATTaGCCTGTCCATCATGCGCCAGTAGTCCAACGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PWPSPGQAGHPH*PVHHAPVVQRC Trigger: ACAACGTTGGACTACTGGCGCATGATGGACAGGTCAATGAGGATGGCCAGCCTGACCTGGGGAAGGCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS GCA 72 bp | CCTCGTCCTTATCAACACCATCTCCCAGCTTGTACATaGGGCTGGCATTGGCGCAGGCCCAGACATGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRPYQHHLPACT*GWHWRRPRHGP Trigger: TGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGATGGTGTTGATAAGGACGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS CCA 72 bp | CCTTATCAACACCATCTCCCAGCTTGTACATGCGGCTaGCATTGGCGCAGGCCCAGACATGGCCCAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PYQHHLPACTCG*HWRRPRHGPGH Trigger: GTGACCTGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGATGGTGTTGATAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS CAA 72 bp | GCCTTGGCCTCGTCCTTATCAACACCATCTCCCAGCTaGTACATGCGGCTGGCATTGGCGCAGGCCCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: ALASSLSTPSPS*YMRLALAQAQT Trigger: TGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGATGGTGTTGATAAGGACGAGGCCAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
||
| CDS CAA 90 bp | GTCCACCAGCCGATAGCAACCCTCCGGGTCCTTCTCGCGGTAGCATaGGTAGTGACACTCCACCTCCATGTTCTCCAGGAAGGACTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VHQPIATLRVLLAVA*VVTLHLHVLQEGLH Trigger: GTGAAGTCCTTCCTGGAGAACATGGAGGTGGAGTGTCACTACCAATGCTACCGCGAGAAGGACCCGGAGGGTTGCTATCGGCTGGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS CAA 90 bp | TCGTCCTTATCAACACCATCTCCCAGCTTGTACATGCGGCTGGCATaGGCGCAGGCCCAGACATGGCCCAGGTCACAGGCCTTCATTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSLSTPSPSLYMRLA*AQAQTWPRSQAFIE Trigger: TTCAATGAAGGCCTGTGACCTGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAAGCTGGGAGATGGTGTTGATAAGGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS CAA 72 bp | CCGATAGCAACCCTCCGGGTCCTTCTCGCGGTAGCATaGGTAGTGACACTCCACCTCCATGTTCTCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PIATLRVLLAVA*VVTLHLHVLQE Trigger: TTCCTGGAGAACATGGAGGTGGAGTGTCACTACCAATGCTACCGCGAGAAGGACCCGGAGGGTTGCTATCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS CAA 90 bp | TGTTCTTTGTGCAGCTGCCGGGCCCTGTTTTTCAGCACTTCAGCCTaGGCCTCGTCCTTATCAACACCATCTCCCAGCTTGTACATGCGG | + |
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Preference number: 6 (lower is better) Translates to: CSLCSCRALFFSTSA*ASSLSTPSPSLYMR Trigger: CCGCATGTACAAGCTGGGAGATGGTGTTGATAAGGACGAGGCCAAGGCTGAAGTGCTGAAAAACAGGGCCCGGCAGCTGCACAAAGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS GCA 72 bp | AAGAGGCAGCCTTTAGGTCCTGAGTCAGGCCACCTTTaGCAGTCACGTAATAAGCCCCCAGCTTGTAACAGC | + |
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Preference number: 6 (lower is better) Translates to: KRQPLGPESGHL*QSRNKPPACNS Trigger: GCTGTTACAAGCTGGGGGCTTATTACGTGACTGGCAAAGGTGGCCTGACTCAGGACCTAAAGGCTGCCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS GCA 72 bp | AGAGGTTGGACGTTTTTCTGCTGTTCTTTGTGCAGCTaGCGGGCCCTGTTTTTCAGCACTTCAGCCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RGWTFFCCSLCS*RALFFSTSALA Trigger: GGCCAAGGCTGAAGTGCTGAAAAACAGGGCCCGGCAGCTGCACAAAGAACAGCAGAAAAACGTCCAACCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS CCA 72 bp | TTGTACATGCGGCTGGCATTGGCGCAGGCCCAGACATaGCCCAGGTCACAGGCCTTCATTGAATATTTACAC | + |
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Preference number: 6 (lower is better) Translates to: LYMRLALAQAQT*PRSQAFIEYLH Trigger: GTGTAAATATTCAATGAAGGCCTGTGACCTGGGCCATGTCTGGGCCTGCGCCAATGCCAGCCGCATGTACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS CAA 90 bp | CTCACAGTTGAACTTCAGCACCTTTGCGGCTTCATCAAAATTCTTTaGGATTCCTTCCAGATAGTCCACCAGCCGATAGCAACCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LTVELQHLCGFIKIL*DSFQIVHQPIATLR Trigger: CCGGAGGGTTGCTATCGGCTGGTGGACTATCTGGAAGGAATCCAAAAGAATTTTGATGAAGCCGCAAAGGTGCTGAAGTTCAACTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS CAA 72 bp | GAACTTCAGCACCTTTGCGGCTTCATCAAAATTCTTTaGGATTCCTTCCAGATAGTCCACCAGCCGATAGCA | + |
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Preference number: 6 (lower is better) Translates to: ELQHLCGFIKIL*DSFQIVHQPIA Trigger: TGCTATCGGCTGGTGGACTATCTGGAAGGAATCCAAAAGAATTTTGATGAAGCCGCAAAGGTGCTGAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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| CDS TCA 72 bp | TGTAACAGCTGTCACCATGCCCGTATTTCTCACAGTTaGACTTCAGCACCTTTGCGGCTTCATCAAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: CNSCHHARISHS*TSAPLRLHQNS Trigger: AGAATTTTGATGAAGCCGCAAAGGTGCTGAAGTTCAACTGTGAGAAATACGGGCATGGTGACAGCTGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131656.2 |
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