Pregenerated sensors for COA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026112Ensembl transcript IDs: ENSMUST00000027286.7
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAGGGCAGGGCGGGCGACCTGGCAGTGGCTGGGAGTCCTCAGATaGGCACACTTGCATTTCCTGAGGTGGATGCAGAACAGTGCGGCA | + |
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Preference number: 1 (lower is better) Translates to: DRAGRATWQWLGVLR*AHLHFLRWMQNSAA Trigger: TGCCGCACTGTTCTGCATCCACCTCAGGAAATGCAAGTGTGCCCATCTGAGGACTCCCAGCCACTGCCAGGTCGCCCGCCCTGCCCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR TCA 90 bp | ACCAAGCATATGACCCAGGAAGGAGCAGCGTCCTTCAGCAGGGTGTaGCTTGTGGGCCAGCCTATGCTCTCCTTTTTGGAGCCCACCCAT | + |
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Preference number: 1 (lower is better) Translates to: TKHMTQEGAASFSRV*LVGQPMLSFLEPTH Trigger: ATGGGTGGGCTCCAAAAAGGAGAGCATAGGCTGGCCCACAAGTCACACCCTGCTGAAGGACGCTGCTCCTTCCTGGGTCATATGCTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 90 bp | CAGTGGCTGGGAGTCCTCAGATGGGCACACTTGCATTTCCTGAGGTaGATGCAGAACAGTGCGGCAGGCAGACTGTACTGTACTGCACTG | + |
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Preference number: 1 (lower is better) Translates to: QWLGVLRWAHLHFLR*MQNSAAGRLYCTAL Trigger: CAGTGCAGTACAGTACAGTCTGCCTGCCGCACTGTTCTGCATCCACCTCAGGAAATGCAAGTGTGCCCATCTGAGGACTCCCAGCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR GCA 90 bp | GTGGAAGGTGTGGCTCAATGGTCGAGCTTCCTAGCATGCAGAATGTaGACTCCTCCACACTGCACACAGACACCAAGCTTGGGACATAGG | + |
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Preference number: 1 (lower is better) Translates to: VEGVAQWSSFLACRM*TPPHCTQTPSLGHR Trigger: CCTATGTCCCAAGCTTGGTGTCTGTGTGCAGTGTGGAGGAGTGCACATTCTGCATGCTAGGAAGCTCGACCATTGAGCCACACCTTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 90 bp | CAGACTCATTCAGAAACAGCACTGATCCATTTTCTCTGGTGTCCTTaGGAGGAACACCTGGCCCAGAGGTGGAAGAGATGCGGCAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: QTHSETALIHFLWCP*EEHLAQRWKRCGSC Trigger: GCAGCTGCCGCATCTCTTCCACCTCTGGGCCAGGTGTTCCTCCCAAGGACACCAGAGAAAATGGATCAGTGCTGTTTCTGAATGAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR GCA 90 bp | GGCCCCACCATGCATGGCGCCATGTTTTCCCTCCAAAGGGCATTGTaGAAAGCTAGATATGCACATGTGGAGAGTAGAAAGTCAGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: GPTMHGAMFSLQRAL*KARYAHVESRKSEL Trigger: AAGCTCTGACTTTCTACTCTCCACATGTGCATATCTAGCTTTGCACAATGCCCTTTGGAGGGAAAACATGGCGCCATGCATGGTGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 90 bp | TCACTCTCTGTTGAAACTGAAGCACTAGTGGAAGGTGTGGCTCAATaGTCGAGCTTCCTAGCATGCAGAATGTGCACTCCTCCACACTGC | + |
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Preference number: 1 (lower is better) Translates to: SLSVETEALVEGVAQ*SSFLACRMCTPPHC Trigger: GCAGTGTGGAGGAGTGCACATTCTGCATGCTAGGAAGCTCGACCATTGAGCCACACCTTCCACTAGTGCTTCAGTTTCAACAGAGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR TCA 90 bp | AATTTTGATAGTAATTCTCCAGTAATCAAAGCAGTGGCGTTGGCATaGAGGCAGACAGAGTCAGGAGAGACTGGGCTCAAAACCGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: NFDSNSPVIKAVALA*RQTESGETGLKTGP Trigger: GGGGCCGGTTTTGAGCCCAGTCTCTCCTGACTCTGTCTGCCTTCATGCCAACGCCACTGCTTTGATTACTGGAGAATTACTATCAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR TCA 90 bp | GCTGCATTCCAGTGTTTAGGGATGAGGCCCATAACTTATCTTATGTaGTTGTGCATGGTGTCAGCACAGTACATGCGACCAGGATCTAGC | + |
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Preference number: 1 (lower is better) Translates to: AAFQCLGMRPITYLM*LCMVSAQYMRPGSS Trigger: GCTAGATCCTGGTCGCATGTACTGTGCTGACACCATGCACAATCACATAAGATAAGTTATGGGCCTCATCCCTAAACACTGGAATGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR TCA 90 bp | CCTCTTTATCACAAGCAGAATGGCTGTCAGCAATATGAGCAGTTGTaGAAGTCAGGGGTGCTGGAGCCTAGATCCCATGACAGCATGAAA | + |
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Preference number: 1 (lower is better) Translates to: PLYHKQNGCQQYEQL*KSGVLEPRSHDSMK Trigger: TTTCATGCTGTCATGGGATCTAGGCTCCAGCACCCCTGACTTTCACAACTGCTCATATTGCTGACAGCCATTCTGCTTGTGATAAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR GCA 90 bp | TCTCTCTCTCTCACACACACACACACACACACACACACAAGTGCATaGACACAACAAAGAGTCCACATATACCAGGCACTTAGGGTACTC | + |
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Preference number: 1 (lower is better) Translates to: SLSLTHTHTHTHTSA*TQQRVHIYQALRVL Trigger: GAGTACCCTAAGTGCCTGGTATATGTGGACTCTTTGTTGTGTGCATGCACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 90 bp | AGAGCTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTaGATGCTACTCAGCAGAACTACACTGCAGACTGATGCTACATGC | + |
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Preference number: 1 (lower is better) Translates to: RAHLLDGEIHSVCLL*MLLSRTTLQTDATC Trigger: GCATGTAGCATCAGTCTGCAGTGTAGTTCTGCTGAGTAGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 90 bp | GTCAAAAGCCCCAAAGTAGAAACAGCTCAGAGCTCATCTGCTCGATaGAGAAATACACAGTGTCTGTCTACTGTGGATGCTACTCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: VKSPKVETAQSSSAR*RNTQCLSTVDATQQ Trigger: CTGCTGAGTAGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTGAGCTGTTTCTACTTTGGGGCTTTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR TCA 90 bp | GTCAGGAGCTCCAGGGTGGGAACAACCGAGGTACCCACGGCTGGATaGGTAGGTAACAAGATACATACAATATGCATACAACATATACTA | + |
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Preference number: 1 (lower is better) Translates to: VRSSRVGTTEVPTAG*VGNKIHTICIQHIL Trigger: TAGTATATGTTGTATGCATATTGTATGTATCTTGTTACCTACTCATCCAGCCGTGGGTACCTCGGTTGTTCCCACCCTGGAGCTCCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR GCA 90 bp | CTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTGGATaGTACTCAGCAGAACTACACTGCAGACTGATGCTACATGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: LICSMEKYTVSVYCG*YSAELHCRLMLHAN Trigger: ATTGGCATGTAGCATCAGTCTGCAGTGTAGTTCTGCTGAGTAGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR TCA 90 bp | ACAATACCATTTGTCCTTACAAAGGAAGGAAACCGATATATGATATaGACCTTCATGGTATTCCGCGCTGGAGGCACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: TIPFVLTKEGNRYMI*TFMVFRAGGTHTHT Trigger: TGTGTGTGTGTGTGTGCCTCCAGCGCGGAATACCATGAAGGTTCATATCATATATCGGTTTCCTTCCTTTGTAAGGACAAATGGTATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 90 bp | GGCAGTTCTAATCTCTGTGCACTGCGGACAGAACATAGAATAGTGTaGCTGATATGGAAACTATGGCAATGCCTACTAATAAAAACAGAA | + |
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Preference number: 1 (lower is better) Translates to: GSSNLCALRTEHRIV*LIWKLWQCLLIKTE Trigger: TTCTGTTTTTATTAGTAGGCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGCACAGAGATTAGAACTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR TCA 90 bp | GCCACTCTGTTCAATGGCAAGAATCACACTGAAGATTTAGTGCCCTaGTGGCTTTCTACTGTGTTAAGTGGTCAAAATAATATGTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: ATLFNGKNHTEDLVP*WLSTVLSGQNNMLR Trigger: CCTTAACATATTATTTTGACCACTTAACACAGTAGAAAGCCATCAGGGCACTAAATCTTCAGTGTGATTCTTGCCATTGAACAGAGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 90 bp | AATCTCTGTGCACTGCGGACAGAACATAGAATAGTGTGGCTGATATaGAAACTATGGCAATGCCTACTAATAAAAACAGAAGTACCCTAT | + |
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Preference number: 1 (lower is better) Translates to: NLCALRTEHRIVWLI*KLWQCLLIKTEVPY Trigger: ATAGGGTACTTCTGTTTTTATTAGTAGGCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGCACAGAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR TCA 90 bp | ATGGAAACTATGGCAATGCCTACTAATAAAAACAGAAGTACCCTATaGCATACAATCTGCTACATGTATGTTAAGACTGAAAGCGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: METMAMPTNKNRSTL*HTICYMYVKTESGS Trigger: GGACCCGCTTTCAGTCTTAACATACATGTAGCAGATTGTATGTCATAGGGTACTTCTGTTTTTATTAGTAGGCATTGCCATAGTTTCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 90 bp | AAAATCACTGTAGAAAATATAATTGAGGCCGTCATGATACGACCTTaGAGTTCAACTCTAAGGCATGTATTAAATGAAACGTTCATAGCA | + |
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Preference number: 1 (lower is better) Translates to: KITVENIIEAVMIRP*SSTLRHVLNETFIA Trigger: TGCTATGAACGTTTCATTTAATACATGCCTTAGAGTTGAACTCCAAGGTCGTATCATGACGGCCTCAATTATATTTTCTACAGTGATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CAA 90 bp | CGGTGTGTGCTTTCTGGGAAGTGCAGCGCTGAAAATGCTCGCGCTTaGGGGATTCCCGGCCAGCCTGGGCTAAGCCACATAAGGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: RCVLSGKCSAENARA*GIPGQPGLSHIREC Trigger: ACATTCCCTTATGTGGCTTAGCCCAGGCTGGCCGGGAATCCCCAAAGCGCGAGCATTTTCAGCGCTGCACTTCCCAGAAAGCACACACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR TCA 90 bp | CAAGAGCAGCGGTGTGTGCTTTCTGGGAAGTGCAGCGCTGAAAATGCTCGCGCTCATAGGTGGCAGGACTaGAGGGTGCAATACTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: QEQRCVLSGKCSAENARAHRWQD*RVQYSH Trigger: GTGGGAGTATTGCACCCTTCAGTCCTGCCACCTATG...AGCGCGAGCATTTTCAGCGCTGCACTTCCCAGAAAGCACACACCGCTGCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGGAGCTCCAGGGTGGGAACAACCGAGGTACCCACGGCTGGATGAGTAGGTGTCAGCACAGTACATaGGACCAGGATCTAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SQELQGGNNRGTHGWMSRCQHST*DQDLAK Trigger: CTTGGCTAGATCCTGGTCGCATGTACTGTGCTGACA...CCTACTCATCCAGCCGTGGGTACCTCGGTTGTTCCCACCCTGGAGCTCCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | GCACTGCGGACAGAACATAGAATAGTGTGGCTGATATGGAAACTATGGCAATGCGCAGGGCGGGCGACCTaGCAGTGGCTGGGAGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: ALRTEHRIVWLIWKLWQCAGRAT*QWLGVL Trigger: GAGGACTCCCAGCCACTGCCAGGTCGCCCGCCCTGC...GCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CAA 90 bp | GCAGACTCATTCAGAAACAGCACTGATCCATTTTCTCTGGTGTCCTaGGGAGGAACACCTGGCCCAGAGGTGGAAGAGATGCGGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ADSFRNSTDPFSLVS*GGTPGPEVEEMRQL Trigger: CAGCTGCCGCATCTCTTCCACCTCTGGGCCAGGTGTTCCTCCCAAGGACACCAGAGAAAATGGATCAGTGCTGTTTCTGAATGAGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGGAGCTCCAGGGTGGGAACAACCGAGGTACCCACGGCTGGATGAGTAGGTCTGTCTACTGTGGATaGTACTCAGCAGAACTACAC | + |
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Preference number: 2 (lower is better) Translates to: SQELQGGNNRGTHGWMSRSVYCG*YSAELH Trigger: GTGTAGTTCTGCTGAGTAGCATCCACAGTAGACAGA...CCTACTCATCCAGCCGTGGGTACCTCGGTTGTTCCCACCCTGGAGCTCCTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTAATCAAAGCAGTGGCGTTGGCATGAAGGCAGACAGAGTCAGGAGAGACTTTCTCTGGTGTCCTTaGGAGGAACACCTGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SSNQSSGVGMKADRVRRDFLWCP*EEHLAQ Trigger: CTGGGCCAGGTGTTCCTCCCAAGGACACCAGAGAAA...GTCTCTCCTGACTCTGTCTGCCTTCATGCCAACGCCACTGCTTTGATTACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR GCA 90 bp | GCTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTGGATGCTACTCCAGAGGTGGAAGAGATaGGGCAGCTGCTGTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: AHLLDGEIHSVCLLWMLLQRWKR*GSCCAS Trigger: GGAAGCACAGCAGCTGCCGCATCTCTTCCACCTCTG...GAGTAGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAGTAGAAACAGCTCAGAGCTCATCTGCTCGATGGAGAAATACACAGTGTTCCTTCAGCAGGGTGTaGCTTGTGGGCCAGCCTATG | + |
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Preference number: 2 (lower is better) Translates to: PKVETAQSSSARWRNTQCSFSRV*LVGQPM Trigger: CATAGGCTGGCCCACAAGTCACACCCTGCTGAAGGA...ACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTGAGCTGTTTCTACTTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | CACCAAGCATATGACCCAGGAAGGAGCAGCGTCCTTCAGCAGGGTGTGACTTGTGACCATGGAAAATCCTaGGTGACTTTCATCTTGCGT | + |
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Preference number: 2 (lower is better) Translates to: HQAYDPGRSSVLQQGVTCDHGKS*VTFILR Trigger: ACGCAAGATGAAAGTCACCCAGGATTTTCCATGGTC...ACAAGTCACACCCTGCTGAAGGACGCTGCTCCTTCCTGGGTCATATGCTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGCAGCGGTGTGTGCTTTCTGGGAAGTGCAGCGCTGAAAATGCTCGCGCTGTCATGATACGACCTTaGAGTTCAACTCTAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: QEQRCVLSGKCSAENARAVMIRP*SSTLRH Trigger: ATGCCTTAGAGTTGAACTCCAAGGTCGTATCATGAC...AGCGCGAGCATTTTCAGCGCTGCACTTCCCAGAAAGCACACACCGCTGCTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTAATCAAAGCAGTGGCGTTGGCATGAAGGCAGACAGAGTCAGGAGAGACTTGCATTTCCTGAGGTaGATGCAGAACAGTGCGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSNQSSGVGMKADRVRRDLHFLR*MQNSAA Trigger: TGCCGCACTGTTCTGCATCCACCTCAGGAAATGCAA...GTCTCTCCTGACTCTGTCTGCCTTCATGCCAACGCCACTGCTTTGATTACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTAATCAAAGCAGTGGCGTTGGCATGAAGGCAGACAGAGTCAGGAGAGACAGGAGCCACTATCTATaGCAATCTCATCATGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSNQSSGVGMKADRVRRDRSHYL*QSHHGL Trigger: GAGGCCATGATGAGATTGGCATAGATAGTGGCTCCT...GTCTCTCCTGACTCTGTCTGCCTTCATGCCAACGCCACTGCTTTGATTACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | ACTAGTGGAAGGTGTGGCTCAATGGTCGAGCTTCCTAGCATGCAGAATGTGCACGCTGTGCTTCCCGTTTaGTTCCTTTCTGTTAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: TSGRCGSMVELPSMQNVHAVLPV*FLSVKD Trigger: GTCCTTAACAGAAAGGAACCAAACGGGAAGCACAGC...GTGCACATTCTGCATGCTAGGAAGCTCGACCATTGAGCCACACCTTCCACTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTAATCAAAGCAGTGGCGTTGGCATGAAGGCAGACAGAGTCAGGAGAGACCTGATCCATTTTCTCTaGTGTCCTTGGGAGGAACAC | + |
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Preference number: 2 (lower is better) Translates to: SSNQSSGVGMKADRVRRDLIHFL*CPWEEH Trigger: GTGTTCCTCCCAAGGACACCAGAGAAAATGGATCAG...GTCTCTCCTGACTCTGTCTGCCTTCATGCCAACGCCACTGCTTTGATTACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | CACCAAGCATATGACCCAGGAAGGAGCAGCGTCCTTCAGCAGGGTGTGACTTGTCATATCTTGAGGATGTaGTCTATGGCTGATTTCACC | + |
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Preference number: 2 (lower is better) Translates to: HQAYDPGRSSVLQQGVTCHILRM*SMADFT Trigger: GGTGAAATCAGCCATAGACCACATCCTCAAGATATG...ACAAGTCACACCCTGCTGAAGGACGCTGCTCCTTCCTGGGTCATATGCTTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR GCA 90 bp | GCACTGCGGACAGAACATAGAATAGTGTGGCTGATATGGAAACTATGGCAATGCATGCGGCAGCTGCTGTaGTTCCCGTTTGGTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: ALRTEHRIVWLIWKLWQCMRQLL*FPFGSF Trigger: AAAGGAACCAAACGGGAAGCACAGCAGCTGCCGCAT...GCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTGGATGCTCTAGCATGCAGAATGTaGACTCCTCCACACTGCACA | + |
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Preference number: 2 (lower is better) Translates to: QSSSARWRNTQCLSTVDALACRM*TPPHCT Trigger: TGTGCAGTGTGGAGGAGTGCACATTCTGCATGCTAG...AGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGACTGTACTGTACTGCACTGTGAATGTGCTGAACACAATATATACGGAGCTTGGGAGGAACACCTaGCCCAGAGGTGGAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: RQTVLYCTVNVLNTIYTELGRNT*PRGGRD Trigger: ATCTCTTCCACCTCTGGGCCAGGTGTTCCTCCCAAG...CTCCGTATATATTGTGTTCAGCACATTCACAGTGCAGTACAGTACAGTCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | GCACTGCGGACAGAACATAGAATAGTGTGGCTGATATGGAAACTATGGCAATGCCACAGACACCAAGCTTaGGACATAGGTGGCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: ALRTEHRIVWLIWKLWQCHRHQA*DIGGRT Trigger: AGTCCTGCCACCTATGTCCCAAGCTTGGTGTCTGTG...GCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR TCA 90 bp | GCACTGCGGACAGAACATAGAATAGTGTGGCTGATATGGAAACTATGGCAATGCCAATATGAGCAGTTGTaGAAGTCAGGGGTGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ALRTEHRIVWLIWKLWQCQYEQL*KSGVLE Trigger: CTCCAGCACCCCTGACTTTCACAACTGCTCATATTG...GCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | CACACACTGTGTAATCTGATCGAAGAGTCATCCTTGAACATAATCTCTTCATTACACCTGGCCCAGAGGTaGAAGAGATGCGGCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HTLCNLIEESSLNIISSLHLAQR*KRCGSC Trigger: GCAGCTGCCGCATCTCTTCCACCTCTGGGCCAGGTG...TAATGAAGAGATTATGTTCAAGGATGACTCTTCGATCAGATTACACAGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGACTGTACTGTACTGCACTGTGAATGTGCTGAACACAATATATACGGAGGATTTCACCCCTTTATaGGGAGGGGGTTGGCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: RQTVLYCTVNVLNTIYTEDFTPL*GGGWPK Trigger: TTTAGGCCAACCCCCTCCTCATAAAGGGGTGAAATC...CTCCGTATATATTGTGTTCAGCACATTCACAGTGCAGTACAGTACAGTCTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR GCA 90 bp | GCACTGCGGACAGAACATAGAATAGTGTGGCTGATATGGAAACTATGGCAATGCCTTCCAGTCCTTGACTaGTTTAGCCCCAGTGAACTA | + |
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Preference number: 2 (lower is better) Translates to: ALRTEHRIVWLIWKLWQCLPVLD*FSPSEL Trigger: TAGTTCACTGGGGCTAAAGCAGTCAAGGACTGGAAG...GCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTAATCAAAGCAGTGGCGTTGGCATGAAGGCAGACAGAGTCAGGAGAGACATAGTGTGGCTGATATaGAAACTATGGCAATGCCTA | + |
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Preference number: 2 (lower is better) Translates to: SSNQSSGVGMKADRVRRDIVWLI*KLWQCL Trigger: TAGGCATTGCCATAGTTTCCATATCAGCCACACTAT...GTCTCTCCTGACTCTGTCTGCCTTCATGCCAACGCCACTGCTTTGATTACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTGGATGCTCATTTCTGGAAAGGATaGGACTGTTCTGGAAGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: QSSSARWRNTQCLSTVDAHFWKG*DCSGSR Trigger: TCTACTTCCAGAACAGTCTCATCCTTTCCAGAAATG...AGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR TCA 90 bp | CCCAAAGTAGAAACAGCTCAGAGCTCATCTGCTCGATGGAGAAATACACAGTGTTGGATCTTCTATAAATaGCTTCAGCCAGCAGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: PKVETAQSSSARWRNTQCWIFYK*LQPADS Trigger: TGAGTCTGCTGGCTGAAGTCATTTATAGAAGATCCA...ACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTGAGCTGTTTCTACTTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR TCA 90 bp | GCTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTGGATGCTACTCGCCACTTCATGTCATTaGCATTTGTTATCTAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: AHLLDGEIHSVCLLWMLLATSCH*HLLSRV Trigger: CACTCTAGATAACAAATGTCAATGACATGAAGTGGC...GAGTAGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR GCA 90 bp | CCCAAAGTAGAAACAGCTCAGAGCTCATCTGCTCGATGGAGAAATACACAGTGTTCTGTTGTGTCCATTTaGTGCATTCCAGTGTTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: PKVETAQSSSARWRNTQCSVVSI*CIPVFR Trigger: CCTAAACACTGGAATGCAGCAAATGGACACAACAGA...ACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTGAGCTGTTTCTACTTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGCTACAGTCAGCTCCCTTGGAATCAATGCTTTTGTAGATGTGATGACCAAAGCTCAGAGCTCATCTaGTCGATGGAGAAATACACA | + |
|
Preference number: 2 (lower is better) Translates to: ASYSQLPWNQCFCRCDDQSSELI*SMEKYT Trigger: TGTGTATTTCTCCATCGAGCAGATGAGCTCTGAGCT...TTGGTCATCACATCTACAAAAGCATTGATTCCAAGGGAGCTGACTGTAGCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAGACTGTACTGTACTGCACTGTGAATGTGCTGAACACAATATATACGGAGATTCAGAAACAGCACTaGTCCATTTTCTCTGGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RQTVLYCTVNVLNTIYTEIQKQH*SIFSGV Trigger: GACACCAGAGAAAATGGATCAGTGCTGTTTCTGAAT...CTCCGTATATATTGTGTTCAGCACATTCACAGTGCAGTACAGTACAGTCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTAAGAGGTAAAATTTATAAGCTTCTGGAAGTTTGGGTTAGGAATGGTTTCAGCCCACCCATATCTTaGGGATGTGGTCTATGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QVRGKIYKLLEVWVRNGFSPPIS*GCGLWL Trigger: CAGCCATAGACCACATCCTCAAGATATGGGTGGGCT...GAAACCATTCCTAACCCAAACTTCCAGAAGCTTATAAATTTTACCTCTTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAGACTGTACTGTACTGCACTGTGAATGTGCTGAACACAATATATACGGAGATAACTTATCTTATGTaGTTGTGCATGGTGTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RQTVLYCTVNVLNTIYTEITYLM*LCMVSA Trigger: TGCTGACACCATGCACAATCACATAAGATAAGTTAT...CTCCGTATATATTGTGTTCAGCACATTCACAGTGCAGTACAGTACAGTCTGCCT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR CCA 90 bp | AATAAACCTGTCGAATTTGGTAACAGGACTCAGAAAAGACAGGACTACATAGTTATGCCAATCTCATCATaGCCTCCTGAATTCACACAC | + |
|
Preference number: 2 (lower is better) Translates to: NKPVEFGNRTQKRQDYIVMPISS*PPEFTH Trigger: GTGTGTGAATTCAGGAGGCCATGATGAGATTGGCAT...AACTATGTAGTCCTGTCTTTTCTGAGTCCTGTTACCAAATTCGACAGGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGCTACAGTCAGCTCCCTTGGAATCAATGCTTTTGTAGATGTGATGACCAACTCTATCTACTCAAATaGAGGCATTTCATACAAACA | + |
|
Preference number: 2 (lower is better) Translates to: ASYSQLPWNQCFCRCDDQLYLLK*RHFIQT Trigger: TGTTTGTATGAAATGCCTCCATTTGAGTAGATAGAG...TTGGTCATCACATCTACAAAAGCATTGATTCCAAGGGAGCTGACTGTAGCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTAAGAGGTAAAATTTATAAGCTTCTGGAAGTTTGGGTTAGGAATGGTTTCGATCCCATGACAGCATaGAATGTGGTAAAATCACTG | + |
|
Preference number: 2 (lower is better) Translates to: QVRGKIYKLLEVWVRNGFDPMTA*NVVKSL Trigger: CAGTGATTTTACCACATTTCATGCTGTCATGGGATC...GAAACCATTCCTAACCCAAACTTCCAGAAGCTTATAAATTTTACCTCTTACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | AGAGAGTATGCCAAGGACAGGGCAGGGCGGGCGACCTaGCAGTGGCTGGGAGTCCTCAGATGGGCACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: REYAKDRAGRAT*QWLGVLRWAHL Trigger: CAAGTGTGCCCATCTGAGGACTCCCAGCCACTGCCAGGTCGCCCGCCCTGCCCTGTCCTTGGCATACTCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | GGGCGGGCGACCTGGCAGTGGCTGGGAGTCCTCAGATaGGCACACTTGCATTTCCTGAGGTGGATGCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GRATWQWLGVLR*AHLHFLRWMQN Trigger: GTTCTGCATCCACCTCAGGAAATGCAAGTGTGCCCATCTGAGGACTCCCAGCCACTGCCAGGTCGCCCGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | TATGCCAAGGACAGGGCAGGGCGGGCGACCTGGCAGTaGCTGGGAGTCCTCAGATGGGCACACTTGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: YAKDRAGRATWQ*LGVLRWAHLHF Trigger: GAAATGCAAGTGTGCCCATCTGAGGACTCCCAGCCACTGCCAGGTCGCCCGCCCTGCCCTGTCCTTGGCATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | AGAGCAGCGGTGTGTGCTTTCTGGGAAGTGCAGCGCTaGAAATGCTCGCGCTTTGGGGATTCCCGGCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RAAVCAFWEVQR*KCSRFGDSRPA Trigger: GGCTGGCCGGGAATCCCCAAAGCGCGAGCATTTTCAGCGCTGCACTTCCCAGAAAGCACACACCGCTGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | CTCTGGTGTCCTTGGGAGGAACACCTGGCCCAGAGGTaGAAGAGATGCGGCAGCTGCTGTGCTTCCCGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LWCPWEEHLAQR*KRCGSCCASRL Trigger: CAAACGGGAAGCACAGCAGCTGCCGCATCTCTTCCACCTCTGGGCCAGGTGTTCCTCCCAAGGACACCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | GGCGTTGGCATGAAGGCAGACAGAGTCAGGAGAGACTaGGCTCAAAACCGGCCCCACCATGCATGGCGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GVGMKADRVRRD*AQNRPHHAWRH Trigger: ATGGCGCCATGCATGGTGGGGCCGGTTTTGAGCCCAGTCTCTCCTGACTCTGTCTGCCTTCATGCCAACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | ACACAGACACCAAGCTTGGGACATAGGTGGCAGGACTaGAGGGTGCAATACTCCCACTCCCAGTGGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TQTPSLGHRWQD*RVQYSHSQWGQ Trigger: CTGCCCCCACTGGGAGTGGGAGTATTGCACCCTTCAGTCCTGCCACCTATGTCCCAAGCTTGGTGTCTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | GGCTGGGAGTCCTCAGATGGGCACACTTGCATTTCCTaGGGTGGATGCAGAACAGTGCGGCAGGCAGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: GWESSDGHTCIS*GGCRTVRQADC Trigger: ACAGTCTGCCTGCCGCACTGTTCTGCATCCACCTCAGGAAATGCAAGTGTGCCCATCTGAGGACTCCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | ATGACCCAGGAAGGAGCAGCGTCCTTCAGCAGGGTGTaGCTTGTGGGCCAGCCTATGCTCTCCTTTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: MTQEGAASFSRV*LVGQPMLSFLE Trigger: CTCCAAAAAGGAGAGCATAGGCTGGCCCACAAGTCACACCCTGCTGAAGGACGCTGCTCCTTCCTGGGTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR GCA 72 bp | TCTAGTCAAGAGCAGCGGTGTGTGCTTTCTGGGAAGTaGAGCGCTGAAAATGCTCGCGCTTTGGGGATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SSQEQRCVLSGK*SAENARALGIP Trigger: GGGAATCCCCAAAGCGCGAGCATTTTCAGCGCTGCACTTCCCAGAAAGCACACACCGCTGCTCTTGACTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | GGAGTCCTCAGATGGGCACACTTGCATTTCCTGAGGTaGATGCAGAACAGTGCGGCAGGCAGACTGTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: GVLRWAHLHFLR*MQNSAAGRLYC Trigger: ACAGTACAGTCTGCCTGCCGCACTGTTCTGCATCCACCTCAGGAAATGCAAGTGTGCCCATCTGAGGACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR GCA 72 bp | AGCTTCCTAGCATGCAGAATGTGCACTCCTCCACACTaGACACAGACACCAAGCTTGGGACATAGGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SFLACRMCTPPH*TQTPSLGHRWQ Trigger: CTGCCACCTATGTCCCAAGCTTGGTGTCTGTGTGCAGTGTGGAGGAGTGCACATTCTGCATGCTAGGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | TGTGCACTCCTCCACACTGCACACAGACACCAAGCTTaGGACATAGGTGGCAGGACTGAAGGGTGCAATACT | + |
|
Preference number: 3 (lower is better) Translates to: CALLHTAHRHQA*DIGGRTEGCNT Trigger: AGTATTGCACCCTTCAGTCCTGCCACCTATGTCCCAAGCTTGGTGTCTGTGTGCAGTGTGGAGGAGTGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | GGTGGAAGAGATGCGGCAGCTGCTGTGCTTCCCGTTTaGTTCCTTTCTGTTAAGGACCATGGAAAATCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GGRDAAAAVLPV*FLSVKDHGKSW Trigger: CCAGGATTTTCCATGGTCCTTAACAGAAAGGAACCAAACGGGAAGCACAGCAGCTGCCGCATCTCTTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | TCAGAAACAGCACTGATCCATTTTCTCTGGTGTCCTTaGGAGGAACACCTGGCCCAGAGGTGGAAGAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: SETALIHFLWCP*EEHLAQRWKRC Trigger: GCATCTCTTCCACCTCTGGGCCAGGTGTTCCTCCCAAGGACACCAGAGAAAATGGATCAGTGCTGTTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTGGATGCTACTCTTTTCTCTGGTGTCCTaGGGAGGAACACCTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AHLLDGEIHSVCLLWMLLFSLVS*GGTPGP Trigger: TGGGCCAGGTGTTCCTCCCAAGGACACCAGAGAAAA...GAGTAGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | CTAATAGACCTGGACCAGAGGGAGAGGGCAGAGTGCTaGCCAGTGGTTACATTTCTGGAAAGGATGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LIDLDQRERAEC*PVVTFLERMRL Trigger: CAGTCTCATCCTTTCCAGAAATGTAACCACTGGTCAGCACTCTGCCCTCTCCCTCTGGTCCAGGTCTATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | CACAAGCAGAATGGCTGTCAGCAATATGAGCAGTTGTaGAAGTCAGGGGTGCTGGAGCCTAGATCCCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: HKQNGCQQYEQL*KSGVLEPRSHD Trigger: GTCATGGGATCTAGGCTCCAGCACCCCTGACTTTCACAACTGCTCATATTGCTGACAGCCATTCTGCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAGCAGCGGTGTGTGCTTTCTGGGAAGTGCAGCGCTGAAAATGCTCGCGCTGGGGTTGGCCTAAAATaGAAACCAAGAAACAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QEQRCVLSGKCSAENARAGVGLK*KPRNRK Trigger: TTTTCTGTTTCTTGGTTTCAATTTTAGGCCAACCCC...AGCGCGAGCATTTTCAGCGCTGCACTTCCCAGAAAGCACACACCGCTGCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTGGATGCTGTGAACTTCCAGTCCTaGACTGCTTTAGCCCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QSSSARWRNTQCLSTVDAVNFQS*TALAPV Trigger: CACTGGGGCTAAAGCAGTCAAGGACTGGAAGTTCAC...AGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | GTTGAAACTGAAGCACTAGTGGAAGGTGTGGCTCAATaGTCGAGCTTCCTAGCATGCAGAATGTGCACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VETEALVEGVAQ*SSFLACRMCTP Trigger: AGGAGTGCACATTCTGCATGCTAGGAAGCTCGACCATTGAGCCACACCTTCCACTAGTGCTTCAGTTTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTGGATGCTCCTATGCTCTCCTTTTaGGAGCCCACCCATATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QSSSARWRNTQCLSTVDAPMLSF*EPTHIL Trigger: CAAGATATGGGTGGGCTCCAAAAAGGAGAGCATAGG...AGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | ATGACTTCAGCCAGCAGACTCATTCAGAAACAGCACTaGTCCATTTTCTCTGGTGTCCTTGGGAGGAACACC | + |
|
Preference number: 3 (lower is better) Translates to: MTSASRLIQKQH*SIFSGVLGRNT Trigger: GGTGTTCCTCCCAAGGACACCAGAGAAAATGGATCAGTGCTGTTTCTGAATGAGTCTGCTGGCTGAAGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR GCA 72 bp | GATGCAGAACAGTGCGGCAGGCAGACTGTACTGTACTaGACTGTGAATGTGCTGAACACAATATATACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DAEQCGRQTVLY*TVNVLNTIYTE Trigger: CTCCGTATATATTGTGTTCAGCACATTCACAGTGCAGTACAGTACAGTCTGCCTGCCGCACTGTTCTGCATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGACTGTACTGTACTGCACTGTGAATGTGCTGAACACAATATATACGGAGGAGCCCACCCATATCTaGAGGATGTGGTCTATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RQTVLYCTVNVLNTIYTEEPTHI*RMWSMA Trigger: AGCCATAGACCACATCCTCAAGATATGGGTGGGCTC...CTCCGTATATATTGTGTTCAGCACATTCACAGTGCAGTACAGTACAGTCTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTAATCAAAGCAGTGGCGTTGGCATGAAGGCAGACAGAGTCAGGAGAGACCTAAACTCCATGGGGTaGTCTAAGTCAAAGTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSNQSSGVGMKADRVRRDLNSMG*SKSKSN Trigger: ATTGGACTTTGACTTAGACAACCCCATGGAGTTTAG...GTCTCTCCTGACTCTGTCTGCCTTCATGCCAACGCCACTGCTTTGATTACTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | TCCAGGGTGGGAACAACCGAGGTACCCACGGCTGGATaGGTAGGTAACAAGATACATACAATATGCATACAA | + |
|
Preference number: 3 (lower is better) Translates to: SRVGTTEVPTAG*VGNKIHTICIQ Trigger: TTGTATGCATATTGTATGTATCTTGTTACCTACTCATCCAGCCGTGGGTACCTCGGTTGTTCCCACCCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR GCA 72 bp | ATGCATGGCGCCATGTTTTCCCTCCAAAGGGCATTGTaGAAAGCTAGATATGCACATGTGGAGAGTAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: MHGAMFSLQRAL*KARYAHVESRK Trigger: CTTTCTACTCTCCACATGTGCATATCTAGCTTTGCACAATGCCCTTTGGAGGGAAAACATGGCGCCATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | CTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTaGATGCTACTCAGCAGAACTACACTGCAGACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLDGEIHSVCLL*MLLSRTTLQTD Trigger: ATCAGTCTGCAGTGTAGTTCTGCTGAGTAGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | CCCAAAGTAGAAACAGCTCAGAGCTCATCTGCTCGATaGAGAAATACACAGTGTCTGTCTACTGTGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: PKVETAQSSSAR*RNTQCLSTVDA Trigger: AGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTGAGCTGTTTCTACTTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | GGAGCCACTATCTATGCCAATCTCATCATGGCCTCCTaGATTCACACACTGTGTAATCTGATCGAAGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GATIYANLIMAS*IHTLCNLIEES Trigger: TGACTCTTCGATCAGATTACACAGTGTGTGAATTCAGGAGGCCATGATGAGATTGGCATAGATAGTGGCTCC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | CAGTGTTTAGGGATGAGGCCCATAACTTATCTTATGTaGTTGTGCATGGTGTCAGCACAGTACATGCGACCA | + |
|
Preference number: 3 (lower is better) Translates to: QCLGMRPITYLM*LCMVSAQYMRP Trigger: TGGTCGCATGTACTGTGCTGACACCATGCACAATCACATAAGATAAGTTATGGGCCTCATCCCTAAACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR GCA 72 bp | ATCTTATGTGATTGTGCATGGTGTCAGCACAGTACATaGGACCAGGATCTAGCCAAGATCACCAAGCATATG | + |
|
Preference number: 3 (lower is better) Translates to: ILCDCAWCQHST*DQDLAKITKHM Trigger: CATATGCTTGGTGATCTTGGCTAGATCCTGGTCGCATGTACTGTGCTGACACCATGCACAATCACATAAGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | TTTGTCCTTACAAAGGAAGGAAACCGATATATGATATaGACCTTCATGGTATTCCGCGCTGGAGGCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: FVLTKEGNRYMI*TFMVFRAGGTH Trigger: GTGTGTGCCTCCAGCGCGGAATACCATGAAGGTTCATATCATATATCGGTTTCCTTCCTTTGTAAGGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | GCCCATAGTTGTTTAGTCCCATGGATCTTCTATAAATaGCTTCAGCCAGCAGACTCATTCAGAAACAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: AHSCLVPWIFYK*LQPADSFRNST Trigger: AGTGCTGTTTCTGAATGAGTCTGCTGGCTGAAGTCATTTATAGAAGATCCATGGGACTAAACAACTATGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR TCA 72 bp | TACCATTTGTCCTTACAAAGGAAGGAAACCGATATATaGTATGAACCTTCATGGTATTCCGCGCTGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YHLSLQRKETDI*YEPSWYSALEA Trigger: TGCCTCCAGCGCGGAATACCATGAAGGTTCATATCATATATCGGTTTCCTTCCTTTGTAAGGACAAATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | GCACTGCGGACAGAACATAGAATAGTGTGGCTGATATaGAAACTATGGCAATGCCTACTAATAAAAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ALRTEHRIVWLI*KLWQCLLIKTE Trigger: TTCTGTTTTTATTAGTAGGCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR CCA 72 bp | GTAGAAAATATAATTGAGGCCGTCATGATACGACCTTaGAGTTCAACTCTAAGGCATGTATTAAATGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: VENIIEAVMIRP*SSTLRHVLNET Trigger: CGTTTCATTTAATACATGCCTTAGAGTTGAACTCCAAGGTCGTATCATGACGGCCTCAATTATATTTTCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
||
| 3UTR GCA 72 bp | CATAGAATAGTGTGGCTGATATGGAAACTATGGCAATaGCTACTAATAAAAACAGAAGTACCCTATGACATA | + |
|
Preference number: 3 (lower is better) Translates to: HRIVWLIWKLWQ*LLIKTEVPYDI Trigger: TATGTCATAGGGTACTTCTGTTTTTATTAGTAGGCATTGCCATAGTTTCCATATCAGCCACACTATTCTATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 72 bp | ACAGAACATAGAATAGTGTGGCTGATATGGAAACTATaGCAATGCCTACTAATAAAAACAGAAGTACCCTAT | + |
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Preference number: 3 (lower is better) Translates to: TEHRIVWLIWKL*QCLLIKTEVPY Trigger: ATAGGGTACTTCTGTTTTTATTAGTAGGCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR TCA 72 bp | ATGGCAATGCCTACTAATAAAAACAGAAGTACCCTATaGCATACAATCTGCTACATGTATGTTAAGACTGAA | + |
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Preference number: 3 (lower is better) Translates to: MAMPTNKNRSTL*HTICYMYVKTE Trigger: TTCAGTCTTAACATACATGTAGCAGATTGTATGTCATAGGGTACTTCTGTTTTTATTAGTAGGCATTGCCAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CCA 72 bp | TGTGACTTTTTCCAAATAAAGCTCTATCTACTCAAATaGAGGCATTTCATACAAACACATTTCACTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: CDFFQIKLYLLK*RHFIQTHFTLC Trigger: ACAGAGAGTGAAATGTGTTTGTATGAAATGCCTCCATTTGAGTAGATAGAGCTTTATTTGGAAAAAGTCACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CAA 72 bp | CCCAGGAAGGAGCAGCGTCCTTCAGCAGGGTGTGACTaGTGGGCCAGCCTATGCTCTCCTTTTTGGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PRKEQRPSAGCD*WASLCSPFWSP Trigger: TGGGCTCCAAAAAGGAGAGCATAGGCTGGCCCACAAGTCACACCCTGCTGAAGGACGCTGCTCCTTCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CAA 72 bp | ACCTGGCAGTGGCTGGGAGTCCTCAGATGGGCACACTaGCATTTCCTGAGGTGGATGCAGAACAGTGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: TWQWLGVLRWAH*HFLRWMQNSAA Trigger: TGCCGCACTGTTCTGCATCCACCTCAGGAAATGCAAGTGTGCCCATCTGAGGACTCCCAGCCACTGCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| CDS-3UTR CCA 90 bp | AGGCAGACTGTACTGTACTGCACTGTGAATGTGCTGAACACAATATATACGGAGGGGGATTTTCCTTCCTaGAGCACACAGGCAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: RQTVLYCTVNVLNTIYTEGDFPS*STQADC Trigger: GCAGTCTGCCTGTGTGCTCCAGGAAGGAAAATCCCC...CTCCGTATATATTGTGTTCAGCACATTCACAGTGCAGTACAGTACAGTCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CAA 72 bp | ACCATGCATGGCGCCATGTTTTCCCTCCAAAGGGCATaGTGCAAAGCTAGATATGCACATGTGGAGAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TMHGAMFSLQRA*CKARYAHVESR Trigger: TCTACTCTCCACATGTGCATATCTAGCTTTGCACAATGCCCTTTGGAGGGAAAACATGGCGCCATGCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| CDS-3UTR GCA 90 bp | CAGAGCTCATCTGCTCGATGGAGAAATACACAGTGTCTGTCTACTGTGGATGCTGCAAAGCTCTACAGTTaGCTTCCTTCAAACACTGCC | + |
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Preference number: 4 (lower is better) Translates to: QSSSARWRNTQCLSTVDAAKLYS*LPSNTA Trigger: GGCAGTGTTTGAAGGAAGGCAACTGTAGAGCTTTGC...AGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| CDS-3UTR TCA 90 bp | GCACTGCGGACAGAACATAGAATAGTGTGGCTGATATGGAAACTATGGCAATGCATCCTTTTCTCCCTCTaGATCTTGATCTGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: ALRTEHRIVWLIWKLWQCILFSL*ILIWHP Trigger: TGGATGCCAGATCAAGATTCAGAGGGAGAAAAGGAT...GCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| 3UTR CAA 72 bp | GCAGCATGCTCCACGAACACTCTAAACTCCATGGGGTaGTCTAAGTCAAAGTCCAATTATGAGACATGTGAC | + |
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Preference number: 4 (lower is better) Translates to: AACSTNTLNSMG*SKSKSNYETCD Trigger: GTCACATGTCTCATAATTGGACTTTGACTTAGACAACCCCATGGAGTTTAGAGTGTTCGTGGAGCATGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| CDS-3UTR GCA 90 bp | CAGGTAAGAGGTAAAATTTATAAGCTTCTGGAAGTTTGGGTTAGGAATGGTTTCAGACTGCAGCAGACATaGACCCAGATCCTCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QVRGKIYKLLEVWVRNGFRLQQT*TQILLH Trigger: GTGAAGGAGGATCTGGGTGCATGTCTGCTGCAGTCT...GAAACCATTCCTAACCCAAACTTCCAGAAGCTTATAAATTTTACCTCTTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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| CDS-3UTR CAA 90 bp | CACACACTGTGTAATCTGATCGAAGAGTCATCCTTGAACATAATCTCTTCATTATGCAAAGCTCTACAGTaGCCTTCCTTCAAACACTGC | + |
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Preference number: 5 (lower is better) Translates to: HTLCNLIEESSLNIISSLCKALQ*PSFKHC Trigger: GCAGTGTTTGAAGGAAGGCAACTGTAGAGCTTTGCA...TAATGAAGAGATTATGTTCAAGGATGACTCTTCGATCAGATTACACAGTGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027286.7 |
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