RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTNAP5C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038048

Ensembl transcript IDs: ENSMUST00000076038.7

Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TTGGCCTGCTTGCCCACACGCTCCAGGAGAACTGAGTGCCAGTGCTaGTCATCCAGAAGGCTACCCAGAGTTGCCAAGGGTGCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LACLPTRSRRTECQC*SSRRLPRVAKGAVL
Trigger: CAGCACTGCACCCTTGGCAACTCTGGGTAGCCTTCTGGATGACCAGCACTGGCACTCAGTTCTCCTGGAGCGTGTGGGCAAGCAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 90 bp GGTCATCCAGAAGGCTACCCAGAGTTGCCAAGGGTGCAGTGCTGCTaGCCTGGGCTTTGCTGTCATCCAGGTTCAGGTATAGGGCTAGCC +
Preference number: 5 (lower is better)
Translates to: GHPEGYPELPRVQCC*PGLCCHPGSGIGLA
Trigger: GGCTAGCCCTATACCTGAACCTGGATGACAGCAAAGCCCAGGTCAGCAGCACTGCACCCTTGGCAACTCTGGGTAGCCTTCTGGATGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp GTTTCCCAGGTCCATTTGGAGCCACTGCTGGGCATTAGAATCTGCTaGGGACCAACCACCAGTTCCCATTCTCCAGTTGAGTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VSQVHLEPLLGIRIC*GPTTSSHSPVELSW
Trigger: CCAGCTCAACTCAACTGGAGAATGGGAACTGGTGGTTGGTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGACCTGGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp TGGGTAGCCACAGCTGTAATCTCCACTCTGTTTCCCAGGTCCATTTaGAGCCACTGCTGGGCATTAGAATCTGCTGGGGACCAACCACCA +
Preference number: 5 (lower is better)
Translates to: WVATAVISTLFPRSI*SHCWALESAGDQPP
Trigger: TGGTGGTTGGTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGACCTGGGAAACAGAGTGGAGATTACAGCTGTGGCTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 90 bp CCAGGTTCAGGTATAGGGCTAGCCTGCCATTCTGAAGCTCTAGGGTaGTATGGTCTCCACGTTGTCCTTCCCCATGGAACAGAACCCCAT +
Preference number: 5 (lower is better)
Translates to: PGSGIGLACHSEALG*YGLHVVLPHGTEPH
Trigger: ATGGGGTTCTGTTCCATGGGGAAGGACAACGTGGAGACCATATCACCCTAGAGCTTCAGAATGGCAGGCTAGCCCTATACCTGAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 90 bp GCTTTGCTGTCATCCAGGTTCAGGTATAGGGCTAGCCTGCCATTCTaGAGCTCTAGGGTGATATGGTCTCCACGTTGTCCTTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: ALLSSRFRYRASLPF*SSRVIWSPRCPSPW
Trigger: CCATGGGGAAGGACAACGTGGAGACCATATCACCCTAGAGCTTCAGAATGGCAGGCTAGCCCTATACCTGAACCTGGATGACAGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 90 bp TCTGTTTCCCAGGTCCATTTGGAGCCACTGCTGGGCATTAGAATCTaGTGGGGACCAACCACCAGTTCCCATTCTCCAGTTGAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: SVSQVHLEPLLGIRI*WGPTTSSHSPVELS
Trigger: GCTCAACTCAACTGGAGAATGGGAACTGGTGGTTGGTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGACCTGGGAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp GCTGTAATCTCCACTCTGTTTCCCAGGTCCATTTGGAGCCACTGCTaGGCATTAGAATCTGCTGGGGACCAACCACCAGTTCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: AVISTLFPRSIWSHC*ALESAGDQPPVPIL
Trigger: GAGAATGGGAACTGGTGGTTGGTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGACCTGGGAAACAGAGTGGAGATTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 90 bp TCAGAGTCCACCATGGAGACACAGCTGGATTCTGTCAAAGTCCTTTaGACAGTCACAGGTGAAATGCTGGCATGGCGAAGGGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SESTMETQLDSVKVL*TVTGEMLAWRRAAF
Trigger: GAAGGCAGCCCTTCGCCATGCCAGCATTTCACCTGTGACTGTTCAAAGGACTTTGACAGAATCCAGCTGTGTCTCCATGGTGGACTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 90 bp ACAGCTGTAATCTCCACTCTGTTTCCCAGGTCCATTTGGAGCCACTaGTGGGCATTAGAATCTGCTGGGGACCAACCACCAGTTCCCATT +
Preference number: 5 (lower is better)
Translates to: TAVISTLFPRSIWSH*WALESAGDQPPVPI
Trigger: AATGGGAACTGGTGGTTGGTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGACCTGGGAAACAGAGTGGAGATTACAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp CGGTGGTCACTGCATTCGCATCAGAGTCCACCATGGAGACACAGCTaGATTCTGTCAAAGTCCTTTGAACAGTCACAGGTGAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: RWSLHSHQSPPWRHS*ILSKSFEQSQVKCW
Trigger: CCAGCATTTCACCTGTGACTGTTCAAAGGACTTTGACAGAATCCAGCTGTGTCTCCATGGTGGACTCTGATGCGAATGCAGTGACCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp CACGCTCATCTCTCTCTCCAAATGGATCTGTTGAAGAATACACGGTaGTCACTGCATTCGCATCAGAGTCCACCATGGAGACACAGCTGG +
Preference number: 5 (lower is better)
Translates to: HAHLSLQMDLLKNTR*SLHSHQSPPWRHSW
Trigger: CCAGCTGTGTCTCCATGGTGGACTCTGATGCGAATGCAGTGACCACCGTGTATTCTTCAACAGATCCATTTGGAGAGAGAGATGAGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp GTAGGAACATCCATAGACCTCTACTCTCATGCCAATCTTTCCATTTaGATTCCACTCCAGGGGCACAAAGCGAACAAAGCGGGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: VGTSIDLYSHANLSI*IPLQGHKANKAGSH
Trigger: GTGAGAGCCCGCTTTGTTCGCTTTGTGCCCCTGGAGTGGAATCCAAATGGAAAGATTGGCATGAGAGTAGAGGTCTATGGATGTTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp GAATGTCACCACTGCTATGATGCCTCCAATGACTGCCAAGTCACTTaGGACTGCATTTGTGAGCGGTTCACGCTCATCTCTCTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: ECHHCYDASNDCQVT*DCICERFTLISLSK
Trigger: TTTGGAGAGAGAGATGAGCGTGAACCGCTCACAAATGCAGTCCCAAGTGACTTGGCAGTCATTGGAGGCATCATAGCAGTGGTGACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 90 bp CCCTCATACTCTGTGGAAGATTGTCCACCTGCAATGAGGTCTCCTTaGGGTTTCTCTCAGCCCGGATATAATGCCATTGGTTGTCATTCA +
Preference number: 5 (lower is better)
Translates to: PSYSVEDCPPAMRSP*GFSQPGYNAIGCHS
Trigger: TGAATGACAACCAATGGCATTATATCCGGGCTGAGAGAAACCTCAAGGAGACCTCATTGCAGGTGGACAATCTTCCACAGAGTATGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 90 bp ATTTGTGAGCGGTTCACGCTCATCTCTCTCTCCAAATGGATCTGTTaGAGAATACACGGTGGTCACTGCATTCGCATCAGAGTCCACCAT +
Preference number: 5 (lower is better)
Translates to: ICERFTLISLSKWIC*RIHGGHCIRIRVHH
Trigger: ATGGTGGACTCTGATGCGAATGCAGTGACCACCGTGTATTCTTCAACAGATCCATTTGGAGAGAGAGATGAGCGTGAACCGCTCACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 90 bp AGAAAAACTGATGAATGTCACCACTGCTATGATGCCTCCAATGACTaGCAAGTCACTTGGGACTGCATTTGTGAGCGGTTCACGCTCATC +
Preference number: 5 (lower is better)
Translates to: RKTDECHHCYDASND*QVTWDCICERFTLI
Trigger: GATGAGCGTGAACCGCTCACAAATGCAGTCCCAAGTGACTTGGCAGTCATTGGAGGCATCATAGCAGTGGTGACATTCATCAGTTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp GATCTTGTCTTCAGTAATATTGCAGAACACCTGGAGTGGTCCCAGTaGCCCGCTGCCATCAGAGTCAACATAGAAGAACTCAGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: DLVFSNIAEHLEWSQ*PAAIRVNIEELSSF
Trigger: AAAACTGCTGAGTTCTTCTATGTTGACTCTGATGGCAGCGGGCCACTGGGACCACTCCAGGTGTTCTGCAATATTACTGAAGACAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp TTGAAGAATACACGGTGGTCACTGCATTCGCATCAGAGTCCACCATaGAGACACAGCTGGATTCTGTCAAAGTCCTTTGAACAGTCACAG +
Preference number: 5 (lower is better)
Translates to: LKNTRWSLHSHQSPP*RHSWILSKSFEQSQ
Trigger: CTGTGACTGTTCAAAGGACTTTGACAGAATCCAGCTGTGTCTCCATGGTGGACTCTGATGCGAATGCAGTGACCACCGTGTATTCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 90 bp AGTTGGTACAGTCACATGAGTAGCCAATATGCTTCTCCACACACTTaGCCCCATTTTGGCAATTTCTTCCATAACTGCTGCAGTGACCTG +
Preference number: 5 (lower is better)
Translates to: SWYSHMSSQYASPHT*PHFGNFFHNCCSDL
Trigger: CAGGTCACTGCAGCAGTTATGGAAGAAATTGCCAAAATGGGGGCAAGTGTGTGGAGAAGCATATTGGCTACTCATGTGACTGTACCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 90 bp CACAGCTGGATTCTGTCAAAGTCCTTTGAACAGTCACAGGTGAAATaGTGGCATGGCGAAGGGCTGCCTTCAATGGTGTTATATGATTGT +
Preference number: 5 (lower is better)
Translates to: HSWILSKSFEQSQVK*WHGEGLPSMVLYDC
Trigger: ACAATCATATAACACCATTGAAGGCAGCCCTTCGCCATGCCAGCATTTCACCTGTGACTGTTCAAAGGACTTTGACAGAATCCAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 90 bp ACAAAGCGAACAAAGCGGGCTCTCACAGAGTTCAGCAGTTTGTGGTaGACCACACTGTTAGCATTCATGTTTCCTACAAATCTCCAGATG +
Preference number: 5 (lower is better)
Translates to: TKRTKRALTEFSSLW*TTLLAFMFPTNLQM
Trigger: CATCTGGAGATTTGTAGGAAACATGAATGCTAACAGTGTGGTTCACCACAAACTGCTGAACTCTGTGAGAGCCCGCTTTGTTCGCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 90 bp AGTGTGAGAGTAACACGATTTCTTCTGGCACTGATGCTGACAGAATaGCACATGCCATCATTCAAGCCACTGCCTGTGAAGATTTCAGTT +
Preference number: 5 (lower is better)
Translates to: SVRVTRFLLALMLTE*HMPSFKPLPVKISV
Trigger: AACTGAAATCTTCACAGGCAGTGGCTTGAATGATGGCATGTGGCATTCTGTCAGCATCAGTGCCAGAAGAAATCGTGTTACTCTCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 90 bp GATAACCAGTATCGTTTGTCCATTCATCTGTGTCAGCATCACAATTaGAAAAATGTCGAATGTCCAGGCAGCTCTCTTCCAGCCCACATC +
Preference number: 5 (lower is better)
Translates to: DNQYRLSIHLCQHHN*KNVECPGSSLPAHI
Trigger: GATGTGGGCTGGAAGAGAGCTGCCTGGACATTCGACATTTTTGCAATTGTGATGCTGACACAGATGAATGGACAAACGATACTGGTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp AGATCCTTGGGCTGGTTATCAATAAAGATGAGCCTCATGCAGCCTTaGAAAGCCTTAATCGGGTTTAAGCATTGGGAATCAGTGAGATTG +
Preference number: 5 (lower is better)
Translates to: RSLGWLSIKMSLMQP*KALIGFKHWESVRL
Trigger: CAATCTCACTGATTCCCAATGCTTAAACCCGATTAAGGCTTTCCAAGGCTGCATGAGGCTCATCTTTATTGATAACCAGCCCAAGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 90 bp AGCTGGATTCTGTCAAAGTCCTTTGAACAGTCACAGGTGAAATGCTaGCATGGCGAAGGGCTGCCTTCAATGGTGTTATATGATTGTATT +
Preference number: 5 (lower is better)
Translates to: SWILSKSFEQSQVKC*HGEGLPSMVLYDCI
Trigger: AATACAATCATATAACACCATTGAAGGCAGCCCTTCGCCATGCCAGCATTTCACCTGTGACTGTTCAAAGGACTTTGACAGAATCCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 90 bp CACAGATCAATGTGTAAATCACTAAAACTCCCCAGGGAGCCTTGCTaGACTGAAATAAGATCCTTGGGCTGGTTATCAATAAAGATGAGC +
Preference number: 5 (lower is better)
Translates to: HRSMCKSLKLPREPC*TEIRSLGWLSIKMS
Trigger: GCTCATCTTTATTGATAACCAGCCCAAGGATCTTATTTCAGTTCAGCAAGGCTCCCTGGGGAGTTTTAGTGATTTACACATTGATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 90 bp GCAGAAGATGAGAGGTTTGTGTTCTTGGTCACTGAGTATGGTTCTTaGAACATGTATGTAACAGAGGTGTCAGAATCAAAAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: AEDERFVFLVTEYGS*NMYVTEVSESKRAE
Trigger: TTCAGCTCTTTTTGATTCTGACACCTCTGTTACATACATGTTTCAAGAACCATACTCAGTGACCAAGAACACAAACCTCTCATCTTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp GGGGACCAACCACCAGTTCCCATTCTCCAGTTGAGTTaGGCTGGGCTGGACCTTCCAGTGAGATCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: GDQPPVPILQLS*AGLDLPVRSEE
Trigger: CTCCTCAGATCTCACTGGAAGGTCCAGCCCAGCTCAACTCAACTGGAGAATGGGAACTGGTGGTTGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp CTACCCAGAGTTGCCAAGGGTGCAGTGCTGCTGACCTaGGCTTTGCTGTCATCCAGGTTCAGGTATAGGGCT +
Preference number: 6 (lower is better)
Translates to: LPRVAKGAVLLT*ALLSSRFRYRA
Trigger: AGCCCTATACCTGAACCTGGATGACAGCAAAGCCCAGGTCAGCAGCACTGCACCCTTGGCAACTCTGGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 72 bp AGAGTTGCCAAGGGTGCAGTGCTGCTGACCTGGGCTTaGCTGTCATCCAGGTTCAGGTATAGGGCTAGCCTG +
Preference number: 6 (lower is better)
Translates to: RVAKGAVLLTWA*LSSRFRYRASL
Trigger: CAGGCTAGCCCTATACCTGAACCTGGATGACAGCAAAGCCCAGGTCAGCAGCACTGCACCCTTGGCAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 72 bp GAGGCCTCCCTCATACTCTGTGGAAGATTGTCCACCTaGAATGAGGTCTCCTTGAGGTTTCTCTCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: EASLILCGRLST*NEVSLRFLSAR
Trigger: CCGGGCTGAGAGAAACCTCAAGGAGACCTCATTGCAGGTGGACAATCTTCCACAGAGTATGAGGGAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 90 bp TGGAAATGGCCTTCCTCTGAGGCCTCCCTCATACTCTGTGGAAGATaGTCCACCTGCAATGAGGTCTCCTTGAGGTTTCTCTCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: WKWPSSEASLILCGR*STCNEVSLRFLSAR
Trigger: CCGGGCTGAGAGAAACCTCAAGGAGACCTCATTGCAGGTGGACAATCTTCCACAGAGTATGAGGGAGGCCTCAGAGGAAGGCCATTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 72 bp CAGGTCCATTTGGAGCCACTGCTGGGCATTAGAATCTaGTGGGGACCAACCACCAGTTCCCATTCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: QVHLEPLLGIRI*WGPTTSSHSPV
Trigger: AACTGGAGAATGGGAACTGGTGGTTGGTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 72 bp ATCTCCACTCTGTTTCCCAGGTCCATTTGGAGCCACTaGTGGGCATTAGAATCTGCTGGGGACCAACCACCA +
Preference number: 6 (lower is better)
Translates to: ISTLFPRSIWSH*WALESAGDQPP
Trigger: TGGTGGTTGGTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGACCTGGGAAACAGAGTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 72 bp ATGTCCAGGGCATCAGTCTCACCCTTGGTCTGGAAGTaGTGTGTGTTCTTGTCCACAGTGAAGTTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: MSRASVSPLVWK*CVFLSTVKLAC
Trigger: GCAGGCCAACTTCACTGTGGACAAGAACACACAGCACTTCCAGACCAAGGGTGAGACTGATGCCCTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp GTCCATTTGGAGCCACTGCTGGGCATTAGAATCTGCTaGGGACCAACCACCAGTTCCCATTCTCCAGTTGAG +
Preference number: 6 (lower is better)
Translates to: VHLEPLLGIRIC*GPTTSSHSPVE
Trigger: CTCAACTGGAGAATGGGAACTGGTGGTTGGTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp TCCACTCTGTTTCCCAGGTCCATTTGGAGCCACTGCTaGGCATTAGAATCTGCTGGGGACCAACCACCAGTT +
Preference number: 6 (lower is better)
Translates to: STLFPRSIWSHC*ALESAGDQPPV
Trigger: AACTGGTGGTTGGTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGACCTGGGAAACAGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp GGTATAGGGCTAGCCTGCCATTCTGAAGCTCTAGGGTaGTATGGTCTCCACGTTGTCCTTCCCCATGGAACA +
Preference number: 6 (lower is better)
Translates to: GIGLACHSEALG*YGLHVVLPHGT
Trigger: TGTTCCATGGGGAAGGACAACGTGGAGACCATATCACCCTAGAGCTTCAGAATGGCAGGCTAGCCCTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp ACAGCTGTAATCTCCACTCTGTTTCCCAGGTCCATTTaGAGCCACTGCTGGGCATTAGAATCTGCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: TAVISTLFPRSI*SHCWALESAGD
Trigger: GTCCCCAGCAGATTCTAATGCCCAGCAGTGGCTCCAAATGGACCTGGGAAACAGAGTGGAGATTACAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 72 bp CCTTCCTCTGAGGCCTCCCTCATACTCTGTGGAAGATaGTCCACCTGCAATGAGGTCTCCTTGAGGTTTCTC +
Preference number: 6 (lower is better)
Translates to: PSSEASLILCGR*STCNEVSLRFL
Trigger: GAGAAACCTCAAGGAGACCTCATTGCAGGTGGACAATCTTCCACAGAGTATGAGGGAGGCCTCAGAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp TCATCCAGGTTCAGGTATAGGGCTAGCCTGCCATTCTaGAGCTCTAGGGTGATATGGTCTCCACGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SSRFRYRASLPF*SSRVIWSPRCP
Trigger: AGGACAACGTGGAGACCATATCACCCTAGAGCTTCAGAATGGCAGGCTAGCCCTATACCTGAACCTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp ATGCTTTTCATTGGACCTCCCAATCCACCAGGTGAATaGGACTCCATCTGGTGTGTTAAGCAGGCGGGATCT +
Preference number: 6 (lower is better)
Translates to: MLFIGPPNPPGE*DSIWCVKQAGS
Trigger: AGATCCCGCCTGCTTAACACACCAGATGGAGTCCCATTCACCTGGTGGATTGGGAGGTCCAATGAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp CACTGCTATGATGCCTCCAATGACTGCCAAGTCACTTaGGACTGCATTTGTGAGCGGTTCACGCTCATCTCT +
Preference number: 6 (lower is better)
Translates to: HCYDASNDCQVT*DCICERFTLIS
Trigger: AGAGATGAGCGTGAACCGCTCACAAATGCAGTCCCAAGTGACTTGGCAGTCATTGGAGGCATCATAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp CTCCCTCATACTCTGTGGAAGATTGTCCACCTGCAATaGGGTCTCCTTGAGGTTTCTCTCAGCCCGGATATA +
Preference number: 6 (lower is better)
Translates to: LPHTLWKIVHLQ*GLLEVSLSPDI
Trigger: TATATCCGGGCTGAGAGAAACCTCAAGGAGACCTCATTGCAGGTGGACAATCTTCCACAGAGTATGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 72 bp GATGAATGTCACCACTGCTATGATGCCTCCAATGACTaGCAAGTCACTTGGGACTGCATTTGTGAGCGGTTC +
Preference number: 6 (lower is better)
Translates to: DECHHCYDASND*QVTWDCICERF
Trigger: GAACCGCTCACAAATGCAGTCCCAAGTGACTTGGCAGTCATTGGAGGCATCATAGCAGTGGTGACATTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp TCTAGGGTGATATGGTCTCCACGTTGTCCTTCCCCATaGAACAGAACCCCATCCCTTTGTATGCTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: SRVIWSPRCPSP*NRTPSLCMLLN
Trigger: GTTCAAGAGCATACAAAGGGATGGGGTTCTGTTCCATGGGGAAGGACAACGTGGAGACCATATCACCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp TTCAGTAATATTGCAGAACACCTGGAGTGGTCCCAGTaGCCCGCTGCCATCAGAGTCAACATAGAAGAACTC +
Preference number: 6 (lower is better)
Translates to: FSNIAEHLEWSQ*PAAIRVNIEEL
Trigger: GAGTTCTTCTATGTTGACTCTGATGGCAGCGGGCCACTGGGACCACTCCAGGTGTTCTGCAATATTACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp GATCTTGTCTTCAGTAATATTGCAGAACACCTGGAGTaGTCCCAGTGGCCCGCTGCCATCAGAGTCAACATA +
Preference number: 6 (lower is better)
Translates to: DLVFSNIAEHLE*SQWPAAIRVNI
Trigger: TATGTTGACTCTGATGGCAGCGGGCCACTGGGACCACTCCAGGTGTTCTGCAATATTACTGAAGACAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp CTGCATTCGCATCAGAGTCCACCATGGAGACACAGCTaGATTCTGTCAAAGTCCTTTGAACAGTCACAGGTG +
Preference number: 6 (lower is better)
Translates to: LHSHQSPPWRHS*ILSKSFEQSQV
Trigger: CACCTGTGACTGTTCAAAGGACTTTGACAGAATCCAGCTGTGTCTCCATGGTGGACTCTGATGCGAATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp ACACGGTGGTCACTGCATTCGCATCAGAGTCCACCATaGAGACACAGCTGGATTCTGTCAAAGTCCTTTGAA +
Preference number: 6 (lower is better)
Translates to: TRWSLHSHQSPP*RHSWILSKSFE
Trigger: TTCAAAGGACTTTGACAGAATCCAGCTGTGTCTCCATGGTGGACTCTGATGCGAATGCAGTGACCACCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 72 bp GCGGTTCACGCTCATCTCTCTCTCCAAATGGATCTGTaGAAGAATACACGGTGGTCACTGCATTCGCATCAG +
Preference number: 6 (lower is better)
Translates to: AVHAHLSLQMDL*KNTRWSLHSHQ
Trigger: CTGATGCGAATGCAGTGACCACCGTGTATTCTTCAACAGATCCATTTGGAGAGAGAGATGAGCGTGAACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 90 bp TGTAGGAACATCCATAGACCTCTACTCTCATGCCAATCTTTCCATTaGGATTCCACTCCAGGGGCACAAAGCGAACAAAGCGGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: CRNIHRPLLSCQSFH*DSTPGAQSEQSGLS
Trigger: TGAGAGCCCGCTTTGTTCGCTTTGTGCCCCTGGAGTGGAATCCAAATGGAAAGATTGGCATGAGAGTAGAGGTCTATGGATGTTCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 90 bp ATGGTCTCCACGTTGTCCTTCCCCATGGAACAGAACCCCATCCCTTaGTATGCTCTTGAACTTAAGGGAGATCACATCTTTGAGGGTGCT +
Preference number: 6 (lower is better)
Translates to: MVSTLSFPMEQNPIP*YALELKGDHIFEGA
Trigger: AGCACCCTCAAAGATGTGATCTCCCTTAAGTTCAAGAGCATACAAAGGGATGGGGTTCTGTTCCATGGGGAAGGACAACGTGGAGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 90 bp TTTGCTCTAGCAACTTCTGGATCCAACCCAAGAGTCTCTGTGACTTaGCCTAGGACGAGCGACCTTGCTCTCTGGAACTCAGATTCTAGT +
Preference number: 6 (lower is better)
Translates to: FALATSGSNPRVSVT*PRTSDLALWNSDSS
Trigger: ACTAGAATCTGAGTTCCAGAGAGCAAGGTCGCTCGTCCTAGGCAAAGTCACAGAGACTCTTGGGTTGGATCCAGAAGTTGCTAGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp TCTGTGGAAGATTGTCCACCTGCAATGAGGTCTCCTTaGGGTTTCTCTCAGCCCGGATATAATGCCATTGGT +
Preference number: 6 (lower is better)
Translates to: SVEDCPPAMRSP*GFSQPGYNAIG
Trigger: ACCAATGGCATTATATCCGGGCTGAGAGAAACCTCAAGGAGACCTCATTGCAGGTGGACAATCTTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp CGGTTCACGCTCATCTCTCTCTCCAAATGGATCTGTTaGAGAATACACGGTGGTCACTGCATTCGCATCAGA +
Preference number: 6 (lower is better)
Translates to: RFTLISLSKWIC*RIHGGHCIRIR
Trigger: TCTGATGCGAATGCAGTGACCACCGTGTATTCTTCAACAGATCCATTTGGAGAGAGAGATGAGCGTGAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp TCCATAGACCTCTACTCTCATGCCAATCTTTCCATTTaGATTCCACTCCAGGGGCACAAAGCGAACAAAGCG +
Preference number: 6 (lower is better)
Translates to: SIDLYSHANLSI*IPLQGHKANKA
Trigger: CGCTTTGTTCGCTTTGTGCCCCTGGAGTGGAATCCAAATGGAAAGATTGGCATGAGAGTAGAGGTCTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp ATGCAGCCTTGGAAAGCCTTAATCGGGTTTAAGCATTaGGAATCAGTGAGATTGTCAGGGCACCCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: MQPWKALIGFKH*ESVRLSGHPPK
Trigger: CTTTGGAGGGTGCCCTGACAATCTCACTGATTCCCAATGCTTAAACCCGATTAAGGCTTTCCAAGGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp CTCTCTCTCCAAATGGATCTGTTGAAGAATACACGGTaGTCACTGCATTCGCATCAGAGTCCACCATGGAGA +
Preference number: 6 (lower is better)
Translates to: LSLQMDLLKNTR*SLHSHQSPPWR
Trigger: TCTCCATGGTGGACTCTGATGCGAATGCAGTGACCACCGTGTATTCTTCAACAGATCCATTTGGAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 72 bp TCCCCATGGAACAGAACCCCATCCCTTTGTATGCTCTaGAACTTAAGGGAGATCACATCTTTGAGGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SPWNRTPSLCML*NLREITSLRVL
Trigger: GAGCACCCTCAAAGATGTGATCTCCCTTAAGTTCAAGAGCATACAAAGGGATGGGGTTCTGTTCCATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 90 bp CGTTGTCCTTCCCCATGGAACAGAACCCCATCCCTTTGTATGCTCTaGAACTTAAGGGAGATCACATCTTTGAGGGTGCTCATTGTCTTC +
Preference number: 6 (lower is better)
Translates to: RCPSPWNRTPSLCML*NLREITSLRVLIVF
Trigger: GAAGACAATGAGCACCCTCAAAGATGTGATCTCCCTTAAGTTCAAGAGCATACAAAGGGATGGGGTTCTGTTCCATGGGGAAGGACAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 90 bp CCCTCAGTGAGAGGAAGGAAGTCAATGGGTCATCACAGTTGTAATTaGTCGCTGTTAATCCAAAATGCCACAAGCCAGAGAGCACCAAAG +
Preference number: 6 (lower is better)
Translates to: PSVRGRKSMGHHSCN*SLLIQNATSQRAPK
Trigger: CTTTGGTGCTCTCTGGCTTGTGGCATTTTGGATTAACAGCGACAAATTACAACTGTGATGACCCATTGACTTCCTTCCTCTCACTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp ATGTCAGCGCTGAATTCCACACGGAAGGTAGGAAAGTaGAGGAAAGAGGCTTCGGTAGAAAATGAGACAGCA +
Preference number: 6 (lower is better)
Translates to: MSALNSTRKVGK*RKEASVENETA
Trigger: TGCTGTCTCATTTTCTACCGAAGCCTCTTTCCTTCACTTTCCTACCTTCCGTGTGGAATTCAGCGCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 72 bp AGAGAAATTGAGGTAGAGCAAGAGGGTGGGGGCTTGTaGTGTCATGAAACTCAGCATGATGATTTCCTTGGA +
Preference number: 6 (lower is better)
Translates to: REIEVEQEGGGL*CHETQHDDFLG
Trigger: TCCAAGGAAATCATCATGCTGAGTTTCATGACAGCACAAGCCCCCACCCTCTTGCTCTACCTCAATTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 72 bp ATTCTGTCAAAGTCCTTTGAACAGTCACAGGTGAAATaGTGGCATGGCGAAGGGCTGCCTTCAATGGTGTTA +
Preference number: 6 (lower is better)
Translates to: ILSKSFEQSQVK*WHGEGLPSMVL
Trigger: TAACACCATTGAAGGCAGCCCTTCGCCATGCCAGCATTTCACCTGTGACTGTTCAAAGGACTTTGACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp CTGTCAAAGTCCTTTGAACAGTCACAGGTGAAATGCTaGCATGGCGAAGGGCTGCCTTCAATGGTGTTATAT +
Preference number: 6 (lower is better)
Translates to: LSKSFEQSQVKC*HGEGLPSMVLY
Trigger: ATATAACACCATTGAAGGCAGCCCTTCGCCATGCCAGCATTTCACCTGTGACTGTTCAAAGGACTTTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 72 bp ATCCATAGACCTCTACTCTCATGCCAATCTTTCCATTaGGATTCCACTCCAGGGGCACAAAGCGAACAAAGC +
Preference number: 6 (lower is better)
Translates to: IHRPLLSCQSFH*DSTPGAQSEQS
Trigger: GCTTTGTTCGCTTTGTGCCCCTGGAGTGGAATCCAAATGGAAAGATTGGCATGAGAGTAGAGGTCTATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 72 bp AGTGTCACTGCAGTTGCAGTAGAAGTTAGTCCAGGTTaGCGCACATTGTCCTCCATGTTCACAGTAGTTTGG +
Preference number: 6 (lower is better)
Translates to: SVTAVAVEVSPG*RTLSSMFTVVW
Trigger: CCAAACTACTGTGAACATGGAGGACAATGTGCGCAAACCTGGACTAACTTCTACTGCAACTGCAGTGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 72 bp ACGTTGTCCTTCCCCATGGAACAGAACCCCATCCCTTaGTATGCTCTTGAACTTAAGGGAGATCACATCTTT +
Preference number: 6 (lower is better)
Translates to: TLSFPMEQNPIP*YALELKGDHIF
Trigger: AAAGATGTGATCTCCCTTAAGTTCAAGAGCATACAAAGGGATGGGGTTCTGTTCCATGGGGAAGGACAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 72 bp AGAAGAGAAATTGAGGTAGAGCAAGAGGGTGGGGGCTaGTGCTGTCATGAAACTCAGCATGATGATTTCCTT +
Preference number: 6 (lower is better)
Translates to: RREIEVEQEGGG*CCHETQHDDFL
Trigger: AAGGAAATCATCATGCTGAGTTTCATGACAGCACAAGCCCCCACCCTCTTGCTCTACCTCAATTTCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 72 bp ATGAAGTCTTCCTGCTTGCACTCCCTGGTTGTGTTTTaGAAGTCAATGTCATTTCTAGAGGAACTGTCCACA +
Preference number: 6 (lower is better)
Translates to: MKSSCLHSLVVF*KSMSFLEELST
Trigger: TGTGGACAGTTCCTCTAGAAATGACATTGACTTGCAAAACACAACCAGGGAGTGCAAGCAGGAAGACTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CAA 72 bp GTATCGTTTGTCCATTCATCTGTGTCAGCATCACAATaGCAAAAATGTCGAATGTCCAGGCAGCTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: VSFVHSSVSASQ*QKCRMSRQLSS
Trigger: GGAAGAGAGCTGCCTGGACATTCGACATTTTTGCAATTGTGATGCTGACACAGATGAATGGACAAACGATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp CTGGCATGGCGAAGGGCTGCCTTCAATGGTGTTATATaGTTGTATTGGACTGAAGAAAGACATCCAACAAAA +
Preference number: 6 (lower is better)
Translates to: LAWRRAAFNGVI*LYWTEERHPTK
Trigger: TTTTGTTGGATGTCTTTCTTCAGTCCAATACAATCATATAACACCATTGAAGGCAGCCCTTCGCCATGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS GCA 72 bp TATCGTTTGTCCATTCATCTGTGTCAGCATCACAATTaGAAAAATGTCGAATGTCCAGGCAGCTCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: YRLSIHLCQHHN*KNVECPGSSLP
Trigger: TGGAAGAGAGCTGCCTGGACATTCGACATTTTTGCAATTGTGATGCTGACACAGATGAATGGACAAACGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS CCA 72 bp TCTCTTTCTGACAGAAAGGTCCTTCATATGGTGAGTTaGTACAGTCACATGAGTAGCCAATATGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SLSDRKVLHMVS*YSHMSSQYASP
Trigger: TGGAGAAGCATATTGGCTACTCATGTGACTGTACCAACTCACCATATGAAGGACCTTTCTGTCAGAAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp ATGTGTAAATCACTAAAACTCCCCAGGGAGCCTTGCTaGACTGAAATAAGATCCTTGGGCTGGTTATCAATA +
Preference number: 6 (lower is better)
Translates to: MCKSLKLPREPC*TEIRSLGWLSI
Trigger: TATTGATAACCAGCCCAAGGATCTTATTTCAGTTCAGCAAGGCTCCCTGGGGAGTTTTAGTGATTTACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp CATGTATGTAACAGAGGTGTCAGAATCAAAAAGAGCTaGAATCTCTTTCTGACAGAAAGGTCCTTCATATGG +
Preference number: 6 (lower is better)
Translates to: HVCNRGVRIKKS*NLFLTERSFIW
Trigger: CCATATGAAGGACCTTTCTGTCAGAAAGAGATTTCAGCTCTTTTTGATTCTGACACCTCTGTTACATACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7
CDS TCA 72 bp GAGAGGTTTGTGTTCTTGGTCACTGAGTATGGTTCTTaGAACATGTATGTAACAGAGGTGTCAGAATCAAAA +
Preference number: 6 (lower is better)
Translates to: ERFVFLVTEYGS*NMYVTEVSESK
Trigger: TTTTGATTCTGACACCTCTGTTACATACATGTTTCAAGAACCATACTCAGTGACCAAGAACACAAACCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076038.7