Pregenerated sensors for CNTNAP5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067028Ensembl transcript IDs: ENSMUST00000086738.10, ENSMUST00000188735.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATATCTTTCTTaGAACCTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: GKWQGTGTATSSYLS*NLLVFMPQNSIARE Trigger: CTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAGGTTTCAAGAAAGATATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR CCA 90 bp | CACCTGTTAATGGAGTCATGTTCTCCTAGAAATCTAAGTCCTGAGTaGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTCATTA | + |
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Preference number: 1 (lower is better) Translates to: HLLMESCSPRNLSPE*RKAIGRKMNSALSL Trigger: TAATGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAGATTTCTAGGAGAACATGACTCCATTAACAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATCTGGGCCGAGGAGATTaGTGCTCTTGGTGGATAATA | + |
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Preference number: 2 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHLGRGD*CSWWII Trigger: TATTATCCACCAAGAGCACCAATCTCCTCGGCCCAG...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCTTCTTCATACTTTCCTaGTTAATTGGGAAACTGCTC | + |
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Preference number: 2 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFFFILS*LIGKLL Trigger: GAGCAGTTTCCCAATTAATCAGGAAAGTATGAAGAA...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR-3UTR GCA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCCAGGAAAATGAATTCTaGCTTGTCATTAAGCTCATT | + |
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Preference number: 2 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFQENEF*LVIKLI Trigger: AATGAGCTTAATGACAAGGCAGAATTCATTTTCCTG...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR CAA 90 bp | AGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTaGTCATTAAGCTCATTAAGCCATGACAAGAGGGAATTACCTGAT | + |
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Preference number: 2 (lower is better) Translates to: SPEWRKAIGRKMNSA*SLSSLSHDKRELPD Trigger: ATCAGGTAATTCCCTCTTGTCATGGCTTAATGAGCTTAATGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTCAAAGTGCCTGAGAATCTaGAGAGAGAAGTTTAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LSPEWRKAIGRKMNSALSKCLRI*REKFRN Trigger: GTTTCTAAACTTCTCTCTTCAGATTCTCAGGCACTT...TGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTAATGGAGTCATGTTCTCCTAGAAATCTAAGTCCTGAGTGGAGAAAGGCTGAAAGATCAAGTGCCTaGGAATCTGAAGAGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: LLMESCSPRNLSPEWRKAERSSA*ESEERS Trigger: ACTTCTCTCTTCAGATTCTCAGGCACTTGATCTTTC...AGCCTTTCTCCACTCAGGACTTAGATTTCTAGGAGAACATGACTCCATTAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAGGAGCAAAATAGATGTGTGGAGAAAGGCTATTaGCAGGAAAATGAATTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LLVFMPQNSIAREEQNRCVEKGY*QENEFC Trigger: GCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCAC...ACATCTATTTTGCTCCTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAGGAGCAAAATAGATGTTTCTCCAAGGTGCTATaGGGAGCTGCTGTTATATAT | + |
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Preference number: 2 (lower is better) Translates to: LLVFMPQNSIAREEQNRCFSKVL*GAAVIY Trigger: ATATATAACAGCAGCTCCCCATAGCACCTTGGAGAA...ACATCTATTTTGCTCCTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR-3UTR CCA 90 bp | CTGACAATATCATTCTCTGTCAGACACATACACTCCATTTTCTTCTCTAAAGCCGGAGATTGGTGCTCTTaGTGGATAATATGTATTCTA | + |
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Preference number: 2 (lower is better) Translates to: LTISFSVRHIHSIFFSKAGDWCS*WIICIL Trigger: TAGAATACATATTATCCACCAAGAGCACCAATCTCC...GGCTTTAGAGAAGAAAATGGAGTGTATGTGTCTGACAGAGAATGATATTGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR CCA 72 bp | CAAAATCTAGCAGGCAAGAAGAGTTTCCCTCTGCCTTaGGTCTACCAGGTGTGTGTCCTTATAACTGGGACT | + |
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Preference number: 3 (lower is better) Translates to: QNLAGKKSFPLP*VYQVCVLITGT Trigger: AGTCCCAGTTATAAGGACACACACCTGGTAGACCCAAGGCAGAGGGAAACTCTTCTTGCCTGCTAGATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR CCA 72 bp | TCTGCCTTGGGTCTACCAGGTGTGTGTCCTTATAACTaGGACTCTACAACTACATTCCTTTTGTTCTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SALGLPGVCPYN*DSTTTFLLFSK Trigger: CTTGGAGAACAAAAGGAATGTAGTTGTAGAGTCCCAGTTATAAGGACACACACCTGGTAGACCCAAGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR CCA 72 bp | AAGGCAAACACCACAGAGCTCAAGTCTATTCGAAGCTaGAAAGATCAAGTGCCTGAGAATCTGAAGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: KANTTELKSIRS*KDQVPENLKRE Trigger: TTCTCTCTTCAGATTCTCAGGCACTTGATCTTTCCAGCTTCGAATAGACTTGAGCTCTGTGGTGTTTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR CCA 72 bp | TCTACAACTACATTCCTTTTGTTCTCCAAGGTGCTATaGGGAGCTGCTGTTATATATCCCATGCAGACCTAT | + |
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Preference number: 3 (lower is better) Translates to: STTTFLLFSKVL*GAAVIYPMQTY Trigger: ATAGGTCTGCATGGGATATATAACAGCAGCTCCCCATAGCACCTTGGAGAACAAAAGGAATGTAGTTGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR TCA 72 bp | GCTCAAGTCTATTCGAAGCTGGAAAGATCAAGTGCCTaGGAATCTGAAGAGAGAAGTTTAGAAACTGGACTA | + |
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Preference number: 3 (lower is better) Translates to: AQVYSKLERSSA*ESEERSLETGL Trigger: TAGTCCAGTTTCTAAACTTCTCTCTTCAGATTCTCAGGCACTTGATCTTTCCAGCTTCGAATAGACTTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAGGAGCAAAATAGATGTAGGAGATTGGTGCTCTaGGTGGATAATATGTATTCT | + |
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Preference number: 3 (lower is better) Translates to: LLVFMPQNSIAREEQNRCRRLVL*VDNMYS Trigger: AGAATACATATTATCCACCAAGAGCACCAATCTCCT...ACATCTATTTTGCTCCTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCGCAGTACACCTGGAGTaGTCTCAGTGGGCCGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PMQTYSLSQLSSPPVNGVAVHLE*SQWAAP Trigger: GGGAGCGGCCCACTGAGACCACTCCAGGTGTACTGC...GACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCCTTCAGACAGCTCTGTaGACAGAAGCAGACCATCCT | + |
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Preference number: 4 (lower is better) Translates to: PMQTYSLSQLSSPPVNGVLQTAL*TEADHP Trigger: AGGATGGTCTGCTTCTGTCCACAGAGCTGTCTGAAG...GACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCACATTGCAGTACACCTaGAGTGGTCTCAGTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFTLQYT*SGLSGP Trigger: CGGCCCACTGAGACCACTCCAGGTGTACTGCAATGT...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCCGGCTCATCTTCACCTaGTGTACTCTTCTATTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PMQTYSLSQLSSPPVNGVRLIFT*CTLLLA Trigger: TGCCAATAGAAGAGTACACCAGGTGAAGATGAGCCG...GACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR GCA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATCAGTCACAGGAGAAATaGTGGCATGGCGGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHQSQEK*WHGGGL Trigger: CAGCCCTCCGCCATGCCAGCATTTCTCCTGTGACTG...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | ATATATCCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGAAATGCTGGCATaGCGGAGGGCTGCCTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: IYPMQTYSLSQLSSPPVNGEMLA*RRAAFN Trigger: ATTGAAGGCAGCCCTCCGCCATGCCAGCATTTCTCC...ATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGGATATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCCTTGCTGAACTGAAATaGGGTCCTTGGGCTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFLAELK*GPWAGY Trigger: ATAACCAGCCCAAGGACCTCATTTCAGTTCAGCAAG...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR GCA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCGAGGGTGGGAGCTTGTaGTGTCATAAAACTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFEGGSL*CHKTQC Trigger: ACACTGAGTTTTATGACAGCACAAGCTCCCACCCTC...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | ATATATCCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATAGTCCACCAGGCAAATaGGGCTCCATCTGGTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IYPMQTYSLSQLSSPPVNSPPGK*GSIWCV Trigger: AACACACCAGATGGAGCCCCATTTGCCTGGTGGACT...ATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGGATATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCCATCAGAGTCTATCATaGAGTCACAGCTGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFHQSLS*SHSWTL Trigger: CAGAGTCCAGCTGTGACTCCATGATAGACTCTGATG...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | CTGTTAATGGAGTCATGTTCTCCTAGAAATCTAAGTCCTGAGTGGAGAAAGGCTAGCATTGGGAATCGGTaGGATTGTCAGGGCACCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLMESCSPRNLSPEWRKASIGNR*DCQGTL Trigger: GAGGGTGCCCTGACAATCTCACCGATTCCCAATGCT...AGCCTTTCTCCACTCAGGACTTAGATTTCTAGGAGAACATGACTCCATTAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAGGAGCAAAATAGATGTAAGGGTGCCTCTCATTaGACCTCCCAGTCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLVFMPQNSIAREEQNRCKGASH*TSQSTR Trigger: CCTGGTGGACTGGGAGGTCCAATGAGAGGCACCCTT...ACATCTATTTTGCTCCTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | CTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTCATCAAGCTTCTGCCTGTaGGGCTTTCAGTTCCATGTC | + |
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Preference number: 4 (lower is better) Translates to: LSPEWRKAIGRKMNSALSSSFCL*GFQFHV Trigger: GACATGGAACTGAAAGCCTCACAGGCAGAAGCTTGA...TGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | AATCTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGCCCAGGGAACCTTGCTaGACTGAAATGAGGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: NLSPEWRKAIGRKMNSALPREPC*TEMRSL Trigger: CAAGGACCTCATTTCAGTTCAGCAAGGTTCCCTGGG...CAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | CTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTCAAGTTGCTGGTCCATCTaGATGGAAAGTTCTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSPEWRKAIGRKMNSALSSCWSI*MESSGP Trigger: TGGGCCAGAACTTTCCATTCAGATGGACCAGCAACT...TGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTCAGGGGGTTTCCAGAGCTaGAGAAGCAGGATCATTATC | + |
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Preference number: 4 (lower is better) Translates to: LSPEWRKAIGRKMNSALSGGFQS*RSRIII Trigger: GATAATGATCCTGCTTCTCCAGCTCTGGAAACCCCC...TGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | ATATATCCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATAGAGGCTTGTGTTCTTaGTCACCGGGTATGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IYPMQTYSLSQLSSPPVNRGLCS*SPGMVL Trigger: AAGAACCATACCCGGTGACCAAGAACACAAGCCTCT...ATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGGATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CTGACAATATCATTCTCTGTCAGACACATACACTCCATTTTCTTCTCTAAAGCCTCACAGGAGAAATGCTaGCATGGCGGAGGGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LTISFSVRHIHSIFFSKASQEKC*HGGGLP Trigger: AGGCAGCCCTCCGCCATGCCAGCATTTCTCCTGTGA...GGCTTTAGAGAAGAAAATGGAGTGTATGTGTCTGACAGAGAATGATATTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | ATATATCCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATAGAGGAAGTGCACCATaGTTCCAAGGACACAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: IYPMQTYSLSQLSSPPVNRGSAP*FQGHKK Trigger: CTTTTTGTGTCCTTGGAATCATGGTGCACTTCCTCT...ATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGGATATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | CTGTTAATGGAGTCATGTTCTCCTAGAAATCTAAGTCCTGAGTGGAGAAAGGCTTCCTTCTCCTTCATCTaGTTGGTACGGTGTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: LLMESCSPRNLSPEWRKASFSFI*LVRCDC Trigger: GCAGTCACACCGTACCAATCAGATGAAGGAGAAGGA...AGCCTTTCTCCACTCAGGACTTAGATTTCTAGGAGAACATGACTCCATTAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR GCA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCTTGATGTTGACAGAATaGCACTGGCCATTATTCAAG | + |
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Preference number: 4 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFLMLTE*HWPLFK Trigger: CTTGAATAATGGCCAGTGGCATTCTGTCAACATCAA...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR GCA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATTCCAGATGTGATCTTTaGCCTCTCTTCCAGGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHSRCDL*PLFQVY Trigger: GTAGACCTGGAAGAGAGGGCAAAGATCACATCTGGA...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | CTGACAATATCATTCTCTGTCAGACACATACACTCCATTTTCTTCTCTAAAGCCGGAACCTTGCTGAACTaGAATGAGGTCCTTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LTISFSVRHIHSIFFSKAGTLLN*NEVLGL Trigger: CAGCCCAAGGACCTCATTTCAGTTCAGCAAGGTTCC...GGCTTTAGAGAAGAAAATGGAGTGTATGTGTCTGACAGAGAATGATATTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATAAGTTTGTCCAGGTTTaGGTACAGTGTCCTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHKFVQV*VQCPPC Trigger: ACATGGAGGACACTGTACTCAAACCTGGACAAACTT...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATTCTGTCAAAGTCCCTTaGACAGTCACAGGAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHSVKVP*TVTGEM Trigger: CATTTCTCCTGTGACTGTTCAAGGGACTTTGACAGA...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR GCA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCCTGAAATCTCTTTCTTaGAGAAAGGTCCTTCATATG | + |
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Preference number: 4 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFLKSLS*RKVLHM Trigger: CATATGAAGGACCTTTCTGCAAGAAAGAGATTTCAG...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | ATTGTTAAAGGCAAACACCACAGAGCTCAAGTCTATTCGAAGCTGGAAAGATCAGCTGGTCCATCTGAATaGAAAGTTCTGGCCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: IVKGKHHRAQVYSKLERSAGPSE*KVLAHL Trigger: GAGATGGGCCAGAACTTTCCATTCAGATGGACCAGC...TGATCTTTCCAGCTTCGAATAGACTTGAGCTCTGTGGTGTTTGCCTTTAACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCTTCAATGGTGCGATATaGTTATATTGGACTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFFNGAI*LYWTEE Trigger: CTCTTCAGTCCAATATAACCATATCGCACCATTGAA...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR CCA 90 bp | CTGTTAATGGAGTCATGTTCTCCTAGAAATCTAAGTCCTGAGTGGAGAAAGGCTCCCGTTTGCACTCGATaGCTGTGTTTTGCAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LLMESCSPRNLSPEWRKAPVCTR*LCFASQ Trigger: TTGACTTGCAAAACACAGCCATCGAGTGCAAACGGG...AGCCTTTCTCCACTCAGGACTTAGATTTCTAGGAGAACATGACTCCATTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTTCTTCTCTAAAGCCGTAATACCTAAAAATGTGATATTGACCAGGGACCTGAGCAGGAAAAGGTaGCATTGCCCACGGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIFFSKAVIPKNVILTRDLSRKR*HCPRSR Trigger: TCTACTCCGTGGGCAATGTCACCTTTTCCTGCTCAG...GTCCCTGGTCAATATCACATTTTTAGGTATTACGGCTTTAGAGAAGAAAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATATGAGGTCCTTGGGCTaGTTATCAATAAAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHMRSLG*LSIKMS Trigger: GCTCATCTTTATTGATAACCAGCCCAAGGACCTCAT...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTCACTTGGTCACCGGGTATaGTTCTTGAAACATGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPEWRKAIGRKMNSALSLGHRV*FLKHVC Trigger: ACATACATGTTTCAAGAACCATACCCGGTGACCAAG...TGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATGATGGCTTCCTTGGATaGAGCTGTATCTTTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHDGFLG*SCIFVD Trigger: ATCTACAAAGATACAGCTCCATCCAAGGAAGCCATC...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR TCA 90 bp | CTGACAATATCATTCTCTGTCAGACACATACACTCCATTTTCTTCTCTAAAGCCAACTGGCTATTCAGCTaGAGCAGAAAATGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTISFSVRHIHSIFFSKANWLFS*SRKWPS Trigger: GGAAGGCCATTTTCTGCTTCAGCTGAATAGCCAGTT...GGCTTTAGAGAAGAAAATGGAGTGTATGTGTCTGACAGAGAATGATATTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR TCA 90 bp | AATCTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGACCGGGTATGGTTCTTaGAACATGTATGTAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLSPEWRKAIGRKMNSALTGYGS*NMYVTE Trigger: CTCTGTTACATACATGTTTCAAGAACCATACCCGGT...CAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTAATGGAGTCATGTTCTCCTAGAAATCTAAGTCCTGAGTGGAGAAAGGCTCAGTATTACTGCAGTTaGAGTAGAAGTTTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLMESCSPRNLSPEWRKAQYYCS*SRSLSR Trigger: CCTGGACAAACTTCTACTGCAACTGCAGTAATACTG...AGCCTTTCTCCACTCAGGACTTAGATTTCTAGGAGAACATGACTCCATTAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR GCA 90 bp | ATATATCCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATAAAACCCAGTGTATTTaGTTTAGCAACTTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: IYPMQTYSLSQLSSPPVNKTQCI*FSNFWI Trigger: GATCCAGAAGTTGCTAAAGCAAATACACTGGGTTTT...ATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGGATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATTTTGTGAGTGGTTCATaGTCATCTGTCTTTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHFVSGS*SSVFPK Trigger: CTTTGGAAAGACAGATGAGCATGAACCACTCACAAA...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTTAAAGGCAAACACCACAGAGCTCAAGTCTATTCGAAGCTGGAAAGATCATTGGAACTCCACTTCTaGGGGGAAGTTATAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVKGKHHRAQVYSKLERSLELHF*GEVIAE Trigger: TTCAGCTATAACTTCCCCCCAGAAGTGGAGTTCCAA...TGATCTTTCCAGCTTCGAATAGACTTGAGCTCTGTGGTGTTTGCCTTTAACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | AATCTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTGCTTTAGCAACTTCTaGATCCAACCCAAGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLSPEWRKAIGRKMNSALCFSNF*IQPKSF Trigger: GAAACTCTTGGGTTGGATCCAGAAGTTGCTAAAGCA...CAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTAATGGAGTCATGTTCTCCTAGAAATCTAAGTCCTGAGTGGAGAAAGGCTTCTCCTTCATCTGATTaGTACGGTGTGACTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLMESCSPRNLSPEWRKASPSSD*YGVTAF Trigger: AAAAGCAGTCACACCGTACCAATCAGATGAAGGAGA...AGCCTTTCTCCACTCAGGACTTAGATTTCTAGGAGAACATGACTCCATTAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| 3UTR CAA 72 bp | TGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTaGTCATTAAGCTCATTAAGCCATGACAAGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WRKAIGRKMNSA*SLSSLSHDKRE Trigger: TTCCCTCTTGTCATGGCTTAATGAGCTTAATGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAGGAGCAAAATAGATGTACCTCCAATGAATGCTaGGTCACTCTGGATTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LLVFMPQNSIAREEQNRCTSNEC*VTLDCI Trigger: AATACAATCCAGAGTGACTCAGCATTCATTGGAGGT...ACATCTATTTTGCTCCTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTAATGGAGTCATGTTCTCCTAGAAATCTAAGTCCTGAGTGGAGAAAGGCTTCCAGGTCTACTTTCTaGCCATTCAAGTGTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLMESCSPRNLSPEWRKASRSTF*PFKCNE Trigger: TTCATTACACTTGAATGGGCAGAAAGTAGACCTGGA...AGCCTTTCTCCACTCAGGACTTAGATTTCTAGGAGAACATGACTCCATTAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTTAAAGGCAAACACCACAGAGCTCAAGTCTATTCGAAGCTGGAAAGATCATTGACAGAATGCCACTaGCCATTATTCAAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVKGKHHRAQVYSKLERSLTECH*PLFKLL Trigger: CAGAAGCTTGAATAATGGCCAGTGGCATTCTGTCAA...TGATCTTTCCAGCTTCGAATAGACTTGAGCTCTGTGGTGTTTGCCTTTAACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAGGAGCAAAATAGATGTGCGATATGGTTATATTaGACTGAAGAGAGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVFMPQNSIAREEQNRCAIWLY*TEERHP Trigger: TGGATGCCTCTCTTCAGTCCAATATAACCATATCGC...ACATCTATTTTGCTCCTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTCAGATTGTATTTGTGAGTaGTTCATGCTCATCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPEWRKAIGRKMNSALSDCICE*FMLICL Trigger: AAGACAGATGAGCATGAACCACTCACAAATACAATC...TGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAGGAGCAAAATAGATGTACTGTCCAAGTTGTCTaGGTATTCCTTCTCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVFMPQNSIAREEQNRCTVQVV*VFLLLH Trigger: ATGAAGGAGAAGGAATACCCAGACAACTTGGACAGT...ACATCTATTTTGCTCCTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR TCA 90 bp | ATTGTTAAAGGCAAACACCACAGAGCTCAAGTCTATTCGAAGCTGGAAAGATCATACAATTTGTGGTTCTaGGCAGGAAAAGGTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: IVKGKHHRAQVYSKLERSYNLWF*AGKGDI Trigger: AATGTCACCTTTTCCTGCTCAGAACCACAAATTGTA...TGATCTTTCCAGCTTCGAATAGACTTGAGCTCTGTGGTGTTTGCCTTTAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR GCA 90 bp | AATCTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTGTAACCAGTATTACTaGAGTTGCAGTAGAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLSPEWRKAIGRKMNSALCNQYY*SCSRSL Trigger: CAAACTTCTACTGCAACTGCAGTAATACTGGTTACA...CAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAGGAGCAAAATAGATGTATGGGATTTAAGCATTaGGAATCGGTGAGATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVFMPQNSIAREEQNRCMGFKH*ESVRLS Trigger: TGACAATCTCACCGATTCCCAATGCTTAAATCCCAT...ACATCTATTTTGCTCCTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR TCA 90 bp | TCCATTTTCTTCTCTAAAGCCGTAATACCTAAAAATGTGATATTGACCAGGGACGGAAACACCTGTCTTTaGTGCTACACAGATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SIFFSKAVIPKNVILTRDGNTCL*CYTDQC Trigger: ACATTGATCTGTGTAGCATCAAAGACAGGTGTTTCC...GTCCCTGGTCAATATCACATTTTTAGGTATTACGGCTTTAGAGAAGAAAATGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CCA 90 bp | CTGACAATATCATTCTCTGTCAGACACATACACTCCATTTTCTTCTCTAAAGCCTTCCATGTTCGAAACTaGAAACTCACTGATAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTISFSVRHIHSIFFSKAFHVRN*KLTDRP Trigger: TGGTCTATCAGTGAGTTTCCAGTTTCGAACATGGAA...GGCTTTAGAGAAGAAAATGGAGTGTATGTGTCTGACAGAGAATGATATTGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTTTCTTCTCTAAAGCCGTAATACCTAAAAATGTGATATTGACCAGGGACTCGATGGCTGTGTTTTaGAAGTCAATGTCATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SIFFSKAVIPKNVILTRDSMAVF*KSMSFL Trigger: TAGAAATGACATTGACTTGCAAAACACAGCCATCGA...GTCCCTGGTCAATATCACATTTTTAGGTATTACGGCTTTAGAGAAGAAAATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS TCA 90 bp | CAGTGTCACCGTTGGTCCGAAAGTGCTGGGTGTTCCTGTCCACAGTaGAGTTTGCTTGCTTTCCCACACGCTCCAGGAGAACTGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QCHRWSESAGCSCPQ*SLLAFPHAPGELSA Trigger: GGCACTCAGTTCTCCTGGAGCGTGTGGGAAAGCAAGCAAACTTCACTGTGGACAGGAACACCCAGCACTTTCGGACCAACGGTGACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS TCA 90 bp | TCAGAGTCTATCATGGAGTCACAGCTGGACTCTGTCAAAGTCCCTTaGACAGTCACAGGAGAAATGCTGGCATGGCGGAGGGCTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SESIMESQLDSVKVP*TVTGEMLAWRRAAF Trigger: GAAGGCAGCCCTCCGCCATGCCAGCATTTCTCCTGTGACTGTTCAAGGGACTTTGACAGAGTCCAGCTGTGACTCCATGATAGACTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS TCA 90 bp | CCAAGTTCAGGTATAGGGCTAGTCTTCCATTCTGGAGCTCTAGGGTaGTGTGGTCTCCACGTTGTCCTTCCCCATGGAACAGAACCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSSGIGLVFHSGALG*CGLHVVLPHGTEPH Trigger: ATGGGGTTCTGTTCCATGGGGAAGGACAACGTGGAGACCACATCACCCTAGAGCTCCAGAATGGAAGACTAGCCCTATACCTGAACTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS GCA 90 bp | CACAGCTGGACTCTGTCAAAGTCCCTTGAACAGTCACAGGAGAAATaGTGGCATGGCGGAGGGCTGCCTTCAATGGTGCGATATGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: HSWTLSKSLEQSQEK*WHGGGLPSMVRYGY Trigger: ATAACCATATCGCACCATTGAAGGCAGCCCTCCGCCATGCCAGCATTTCTCCTGTGACTGTTCAAGGGACTTTGACAGAGTCCAGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 90 bp | TTCTGGAGCTCTAGGGTGATGTGGTCTCCACGTTGTCCTTCCCCATaGAACAGAACCCCATCTCCTTGCATGCTCTTGAATTTCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FWSSRVMWSPRCPSP*NRTPSPCMLLNFRE Trigger: CTCCCTGAAATTCAAGAGCATGCAAGGAGATGGGGTTCTGTTCCATGGGGAAGGACAACGTGGAGACCACATCACCCTAGAGCTCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CCA 90 bp | TTCAGGTATAGGGCTAGTCTTCCATTCTGGAGCTCTAGGGTGATGTaGTCTCCACGTTGTCCTTCCCCATGGAACAGAACCCCATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FRYRASLPFWSSRVM*SPRCPSPWNRTPSP Trigger: AGGAGATGGGGTTCTGTTCCATGGGGAAGGACAACGTGGAGACCACATCACCCTAGAGCTCCAGAATGGAAGACTAGCCCTATACCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CCA 90 bp | TTTGCTTGCTTTCCCACACGCTCCAGGAGAACTGAGTGCCAGTGCTaGTCATCCAGAAGGCTACCCAGAATGGCTGAGGGTGTAATACTA | + |
|
Preference number: 5 (lower is better) Translates to: FACFPTRSRRTECQC*SSRRLPRMAEGVIL Trigger: TAGTATTACACCCTCAGCCATTCTGGGTAGCCTTCTGGATGACCAGCACTGGCACTCAGTTCTCCTGGAGCGTGTGGGAAAGCAAGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS TCA 90 bp | CAGTTCCCATTCTCCCATTCAGTTGAGCTGAGCTGGAACTTCCAGTaGGATCTGAGGAACTGGAGAAAGCCTTCGGTGAGAGGAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QFPFSHSVELSWNFQ*DLRNWRKPSVRGKR Trigger: CCTCTTTCCTCTCACCGAAGGCTTTCTCCAGTTCCTCAGATCTCACTGGAAGTTCCAGCTCAGCTCAACTGAATGGGAGAATGGGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CCA 90 bp | GCTTTGCTATCATCCAAGTTCAGGTATAGGGCTAGTCTTCCATTCTaGAGCTCTAGGGTGATGTGGTCTCCACGTTGTCCTTCCCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ALLSSKFRYRASLPF*SSRVMWSPRCPSPW Trigger: CCATGGGGAAGGACAACGTGGAGACCACATCACCCTAGAGCTCCAGAATGGAAGACTAGCCCTATACCTGAACTTGGATGATAGCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CCA 90 bp | GTAGAAGCATCCATAGACCTCCACTCTCATGCCAATCTTTCCGTTTaGATTCCATTCCAAGGGCACAAAGCGAACAAAGCGGGCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VEASIDLHSHANLSV*IPFQGHKANKAGSH Trigger: GTGAGAGCCCGCTTTGTTCGCTTTGTGCCCTTGGAATGGAATCCAAACGGAAAGATTGGCATGAGAGTGGAGGTCTATGGATGCTTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CCA 90 bp | GGAGAAATGCTGGCATGGCGGAGGGCTGCCTTCAATGGTGCGATATaGTTATATTGGACTGAAGAGAGGCATCCAACAAAACCCAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GEMLAWRRAAFNGAI*LYWTEERHPTKPSV Trigger: TACACTGGGTTTTGTTGGATGCCTCTCTTCAGTCCAATATAACCATATCGCACCATTGAAGGCAGCCCTCCGCCATGCCAGCATTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 90 bp | AGCTGGACTCTGTCAAAGTCCCTTGAACAGTCACAGGAGAAATGCTaGCATGGCGGAGGGCTGCCTTCAATGGTGCGATATGGTTATATT | + |
|
Preference number: 5 (lower is better) Translates to: SWTLSKSLEQSQEKC*HGGGLPSMVRYGYI Trigger: AATATAACCATATCGCACCATTGAAGGCAGCCCTCCGCCATGCCAGCATTTCTCCTGTGACTGTTCAAGGGACTTTGACAGAGTCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | CCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCAGAGTTTCTGTAACTTaGCCTAGGATGAGTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: PMQTYSLSQLSSPPVNGVRVSVT*PRMSDL Trigger: GAGGTCACTCATCCTAGGCAAAGTTACAGAAACTCT...GACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | CAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGGAGTCATGTTCACCGTCATCCAGATCTaGTCCTCAGTAACATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTYSLSQLSSPPVNGVMFTVIQI*SSVTLQ Trigger: CTGCAATGTTACTGAGGACAAGATCTGGATGACGGT...GAACATGACTCCATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | ATATATCCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATTGCTTCTCCACACACTaGCCCCCATTTTGGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IYPMQTYSLSQLSSPPVNCFSTH*PPFWQF Trigger: GAACTGCCAAAATGGGGGCAAGTGTGTGGAGAAGCA...ATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGGATATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS CCA 90 bp | CTGGCATGGCGGAGGGCTGCCTTCAATGGTGCGATATGGTTATATTaGACTGAAGAGAGGCATCCAACAAAACCCAGTGTATTTGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LAWRRAAFNGAIWLY*TEERHPTKPSVFAL Trigger: TAAAGCAAATACACTGGGTTTTGTTGGATGCCTCTCTTCAGTCCAATATAACCATATCGCACCATTGAAGGCAGCCCTCCGCCATGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | ATATATCCCATGCAGACCTATAGCCTCTCTCAACTCAGCTCCCCACCTGTTAATGAGCCTCATGCAGCCTaGGAAAGCCTTAATGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: IYPMQTYSLSQLSSPPVNEPHAA*ESLNGI Trigger: AATCCCATTAAGGCTTTCCAAGGCTGCATGAGGCTC...ATTAACAGGTGGGGAGCTGAGTTGAGAGAGGCTATAGGTCTGCATGGGATATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS TCA 90 bp | ACTGCTCCTGGAGTTGACAAATGTGATAGGTACAATTTGTGGTTCTaGGCAGGAAAAGGTGACATTGCCGGAGTAGATCTGATGCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAPGVDKCDRYNLWF*AGKGDIAGVDLMLA Trigger: CGCAAGCATCAGATCTACTCCGGCAATGTCACCTTTTCCTGCTCAGAACCACAAATTGTACCTATCACATTTGTCAACTCCAGGAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS GCA 90 bp | CTGACTCCAGATGTGATCTTTGCCCTCTCTTCCAGGTCTACTTTCTaGCCATTCAAGTGTAATGAACGGATGCATCCAAGAAAGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTPDVIFALSSRSTF*PFKCNERMHPRKPF Trigger: GAAAGGCTTTCTTGGATGCATCCGTTCATTACACTTGAATGGGCAGAAAGTAGACCTGGAAGAGAGGGCAAAGATCACATCTGGAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | AATCTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGCTGAAGATGAGAGGCTaGTGTTCTTGGTCACCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NLSPEWRKAIGRKMNSALLKMRG*CSWSPG Trigger: ACCCGGTGACCAAGAACACAAGCCTCTCATCTTCAG...CAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS TCA 90 bp | TCAGTGTTGGAACCCTGTATCCAAGTCAACTCTGTGTTGTTGTGTTaGACCGTCATCCAGATCTTGTCCTCAGTAACATTGCAGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: SVLEPCIQVNSVLLC*TVIQILSSVTLQYT Trigger: GGTGTACTGCAATGTTACTGAGGACAAGATCTGGATGACGGTTCAACACAACAACACAGAGTTGACTTGGATACAGGGTTCCAACACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS TCA 90 bp | TCAGAGCCTCCAGCTGCTCCATACTCCCACCATAATTTAAGTTCATaGCATAGGGTTTCTCAGTGTTGGAACCCTGTATCCAAGTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: SEPPAAPYSHHNLSS*HRVSQCWNPVSKST Trigger: AGTTGACTTGGATACAGGGTTCCAACACTGAGAAACCCTATGTCATGAACTTAAATTATGGTGGGAGTATGGAGCAGCTGGAGGCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS TCA 90 bp | ACTGCTCCTGGAGTTGACAAATGTGATAGGTACAATTTGTGGTTCTaGGCAGGAAAAGGTGACATTGCCCACGGAGTAGATCTGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TAPGVDKCDRYNLWF*AGKGDIAHGVDLML Trigger: AAGCATCAGATCTACTCCGTGGGCAATGTCACCTTTTCCTGCTCAGAACCACAAATTGTACCTATCACATTTGTCAACTCCAGGAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS GCA 90 bp | TGGAATCATGACAGGTGGCTCCTGTGTAACCAGTATTACTGCAGTTaGAGTAGAAGTTTGTCCAGGTTTGAGTACAGTGTCCTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: WNHDRWLLCNQYYCS*SRSLSRFEYSVLHV Trigger: AACATGGAGGACACTGTACTCAAACCTGGACAAACTTCTACTGCAACTGCAGTAATACTGGTTACACAGGAGCCACCTGTCATGATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 90 bp | AGGTCCTTGGGCTGGTTATCAATAAAGATGAGCCTCATGCAGCCTTaGAAAGCCTTAATGGGATTTAAGCATTGGGAATCGGTGAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLGWLSIKMSLMQP*KALMGFKHWESVRL Trigger: CAATCTCACCGATTCCCAATGCTTAAATCCCATTAAGGCTTTCCAAGGCTGCATGAGGCTCATCTTTATTGATAACCAGCCCAAGGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 90 bp | AGAGTAACACGATTTCTCCTTGCATTGATGTTGACAGAATGCCACTaGCCATTATTCAAGCTTCTGCCTGTGAGGCTTTCAGTTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: RVTRFLLALMLTECH*PLFKLLPVRLSVPC Trigger: ACATGGAACTGAAAGCCTCACAGGCAGAAGCTTGAATAATGGCCAGTGGCATTCTGTCAACATCAATGCAAGGAGAAATCGTGTTACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 90 bp | GTCTGTATACCTCACAGGATTGCTCATAGATGGAATCATGACAGGTaGCTCCTGTGTAACCAGTATTACTGCAGTTGCAGTAGAAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VCIPHRIAHRWNHDR*LLCNQYYCSCSRSL Trigger: CAAACTTCTACTGCAACTGCAGTAATACTGGTTACACAGGAGCCACCTGTCATGATTCCATCTATGAGCAATCCTGTGAGGTATACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATCGATTTCTCCTTGCATaGATGTTGACAGAATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHRFLLA*MLTECH Trigger: GTGGCATTCTGTCAACATCAATGCAAGGAGAAATCG...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATGGGAAACACCTGTCTTaGATGCTACACAGATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHGKHLS*MLHRSM Trigger: CATTGATCTGTGTAGCATCAAAGACAGGTGTTTCCC...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGTCATGTAATAAGGTCTCCTaGATGTTTCTCTCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPEWRKAIGRKMNSALSCNKVS*MFLSAW Trigger: CCAGGCTGAGAGAAACATCAAGGAGACCTTATTACA...TGACAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | ATTGTTAAAGGCAAACACCACAGAGCTCAAGTCTATTCGAAGCTGGAAAGATCAACACTTGCCCCCATTTaGGCAGTTCCTTCCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IVKGKHHRAQVYSKLERSTLAPI*AVPSIA Trigger: AGCTATGGAAGGAACTGCCAAAATGGGGGCAAGTGT...TGATCTTTCCAGCTTCGAATAGACTTGAGCTCTGTGGTGTTTGCCTTTAACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS TCA 90 bp | TTGAATTTCAGGGAGATCACATCTTTGAGGGTACTCATTGTCTTCTaGTTGAACCTGTACAAAAGTGAGCTCCGGCCATCAAAGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LNFREITSLRVLIVF*LNLYKSELRPSKSA Trigger: TGCTGACTTTGATGGCCGGAGCTCACTTTTGTACAGGTTCAATCAGAAGACAATGAGTACCCTCAAAGATGTGATCTCCCTGAAATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS-3UTR CAA 90 bp | TCTAGTAATGTGGAGAAGGGAAGTGGCAAGGTACAGGAACAGCTACTTCATCATCACCGGGTATGGTTCTaGAAACATGTATGTAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSNVEKGSGKVQEQLLHHHRVWF*KHVCNR Trigger: TCTGTTACATACATGTTTCAAGAACCATACCCGGTG...ATGATGAAGTAGCTGTTCCTGTACCTTGCCACTTCCCTTCTCCACATTACTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTATTCATGCCTCAAAATAGCATAGCAAGAGAGGAGCAAAATAGATGTAGTGTGATGGCTTCCTaGGATGGAGCTGTATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLVFMPQNSIAREEQNRCSVMAS*DGAVSL Trigger: CAAAGATACAGCTCCATCCAAGGAAGCCATCACACT...ACATCTATTTTGCTCCTCTCTTGCTATGCTATTTTGAGGCATGAATACCAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | CTGACAATATCATTCTCTGTCAGACACATACACTCCATTTTCTTCTCTAAAGCCCAAGAGGGTGGGAGCTaGTGCTGTCATAAAACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTISFSVRHIHSIFFSKAQEGGS*CCHKTQ Trigger: CTGAGTTTTATGACAGCACAAGCTCCCACCCTCTTG...GGCTTTAGAGAAGAAAATGGAGTGTATGTGTCTGACAGAGAATGATATTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS TCA 90 bp | CACAGATCAATGTGTAAATCACTAAAATTCCCCAGGGAACCTTGCTaGACTGAAATGAGGTCCTTGGGCTGGTTATCAATAAAGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRSMCKSLKFPREPC*TEMRSLGWLSIKMS Trigger: GCTCATCTTTATTGATAACCAGCCCAAGGACCTCATTTCAGTTCAGCAAGGTTCCCTGGGGAATTTTAGTGATTTACACATTGATCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS TCA 90 bp | TCCTCATACTCTTCGGAAGGTTGTCTACATGTAATAAGGTCTCCTTaGTGTTTCTCTCAGCCTGGATGTAATGCCATTGGTTGTCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSYSSEGCLHVIRSP*CFSQPGCNAIGCHS Trigger: TGAATGACAACCAATGGCATTACATCCAGGCTGAGAGAAACATCAAGGAGACCTTATTACATGTAGACAACCTTCCGAAGAGTATGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | CTGACAATATCATTCTCTGTCAGACACATACACTCCATTTTCTTCTCTAAAGCCTTGTCCTCAGTAACATaGCAGTACACCTGGAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LTISFSVRHIHSIFFSKALSSVT*QYTWSG Trigger: ACCACTCCAGGTGTACTGCAATGTTACTGAGGACAA...GGCTTTAGAGAAGAAAATGGAGTGTATGTGTCTGACAGAGAATGATATTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | CTGACAATATCATTCTCTGTCAGACACATACACTCCATTTTCTTCTCTAAAGCCAAGGAACTGTCCAAGTaGTCTGGGTATTCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTISFSVRHIHSIFFSKAKELSK*SGYSFS Trigger: GGAGAAGGAATACCCAGACAACTTGGACAGTTCCTT...GGCTTTAGAGAAGAAAATGGAGTGTATGTGTCTGACAGAGAATGATATTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | AATCTAAGTCCTGAGTGGAGAAAGGCTATTGGCAGGAAAATGAATTCTGCCTTGATACTCTTCGGAAGGTaGTCTACATGTAATAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NLSPEWRKAIGRKMNSALILFGR*STCNKV Trigger: GACCTTATTACATGTAGACAACCTTCCGAAGAGTAT...CAAGGCAGAATTCATTTTCCTGCCAATAGCCTTTCTCCACTCAGGACTTAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS CCA 90 bp | AATGTTACAATTGCTATGACACCTCCAATGAATGCTGAGTCACTCTaGATTGTATTTGTGAGTGGTTCATGCTCATCTGTCTTTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NVTIAMTPPMNAESL*IVFVSGSCSSVFPK Trigger: CTTTGGAAAGACAGATGAGCATGAACCACTCACAAATACAATCCAGAGTGACTCAGCATTCATTGGAGGTGTCATAGCAATTGTAACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS-3UTR CAA 90 bp | CTGACAATATCATTCTCTGTCAGACACATACACTCCATTTTCTTCTCTAAAGCCCTGGATGTAATGCCATaGGTTGTCATTCAGAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LTISFSVRHIHSIFFSKALDVMP*VVIQRI Trigger: TATCCTCTGAATGACAACCAATGGCATTACATCCAG...GGCTTTAGAGAAGAAAATGGAGTGTATGTGTCTGACAGAGAATGATATTGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188735.2 |
||
| CDS TCA 72 bp | CGTTGGTCCGAAAGTGCTGGGTGTTCCTGTCCACAGTaGAGTTTGCTTGCTTTCCCACACGCTCCAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RWSESAGCSCPQ*SLLAFPHAPGE Trigger: TTCTCCTGGAGCGTGTGGGAAAGCAAGCAAACTTCACTGTGGACAGGAACACCCAGCACTTTCGGACCAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS GCA 72 bp | ATGTCCAGGGCATCAGTGTCACCGTTGGTCCGAAAGTaGTGGGTGTTCCTGTCCACAGTGAAGTTTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: MSRASVSPLVRK*WVFLSTVKFAC Trigger: GCAAGCAAACTTCACTGTGGACAGGAACACCCAGCACTTTCGGACCAACGGTGACACTGATGCCCTGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS GCA 72 bp | ACTCTGTCAAAGTCCCTTGAACAGTCACAGGAGAAATaGTGGCATGGCGGAGGGCTGCCTTCAATGGTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: TLSKSLEQSQEK*WHGGGLPSMVR Trigger: TCGCACCATTGAAGGCAGCCCTCCGCCATGCCAGCATTTCTCCTGTGACTGTTCAAGGGACTTTGACAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 72 bp | AGGGCTAGTCTTCCATTCTGGAGCTCTAGGGTGATGTaGTCTCCACGTTGTCCTTCCCCATGGAACAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: RASLPFWSSRVM*SPRCPSPWNRT Trigger: GGTTCTGTTCCATGGGGAAGGACAACGTGGAGACCACATCACCCTAGAGCTCCAGAATGGAAGACTAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS TCA 72 bp | GGTATAGGGCTAGTCTTCCATTCTGGAGCTCTAGGGTaGTGTGGTCTCCACGTTGTCCTTCCCCATGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: GIGLVFHSGALG*CGLHVVLPHGT Trigger: TGTTCCATGGGGAAGGACAACGTGGAGACCACATCACCCTAGAGCTCCAGAATGGAAGACTAGCCCTATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS TCA 72 bp | ATCATGGAGTCACAGCTGGACTCTGTCAAAGTCCCTTaGACAGTCACAGGAGAAATGCTGGCATGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IMESQLDSVKVP*TVTGEMLAWRR Trigger: CCTCCGCCATGCCAGCATTTCTCCTGTGACTGTTCAAGGGACTTTGACAGAGTCCAGCTGTGACTCCATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 72 bp | CTGTCAAAGTCCCTTGAACAGTCACAGGAGAAATGCTaGCATGGCGGAGGGCTGCCTTCAATGGTGCGATAT | + |
|
Preference number: 6 (lower is better) Translates to: LSKSLEQSQEKC*HGGGLPSMVRY Trigger: ATATCGCACCATTGAAGGCAGCCCTCCGCCATGCCAGCATTTCTCCTGTGACTGTTCAAGGGACTTTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CAA 90 bp | ATCAGAGTCTATCATGGAGTCACAGCTGGACTCTGTCAAAGTCCCTaGAACAGTCACAGGAGAAATGCTGGCATGGCGGAGGGCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: IRVYHGVTAGLCQSP*NSHRRNAGMAEGCL Trigger: AAGGCAGCCCTCCGCCATGCCAGCATTTCTCCTGTGACTGTTCAAGGGACTTTGACAGAGTCCAGCTGTGACTCCATGATAGACTCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 72 bp | TCTAGGGTGATGTGGTCTCCACGTTGTCCTTCCCCATaGAACAGAACCCCATCTCCTTGCATGCTCTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRVMWSPRCPSP*NRTPSPCMLLN Trigger: ATTCAAGAGCATGCAAGGAGATGGGGTTCTGTTCCATGGGGAAGGACAACGTGGAGACCACATCACCCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CAA 72 bp | TATCATGGAGTCACAGCTGGACTCTGTCAAAGTCCCTaGAACAGTCACAGGAGAAATGCTGGCATGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YHGVTAGLCQSP*NSHRRNAGMAE Trigger: CTCCGCCATGCCAGCATTTCTCCTGTGACTGTTCAAGGGACTTTGACAGAGTCCAGCTGTGACTCCATGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CAA 90 bp | GTGGTCTCCACGTTGTCCTTCCCCATGGAACAGAACCCCATCTCCTaGCATGCTCTTGAATTTCAGGGAGATCACATCTTTGAGGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: VVSTLSFPMEQNPIS*HALEFQGDHIFEGT Trigger: AGTACCCTCAAAGATGTGATCTCCCTGAAATTCAAGAGCATGCAAGGAGATGGGGTTCTGTTCCATGGGGAAGGACAACGTGGAGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS TCA 72 bp | CTGGCTATTCAGCTGAAGCAGAAAATGGCCTTCCTCTaGGGCCATCCTCATACTCTTCGGAAGGTTGTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LAIQLKQKMAFL*GHPHTLRKVVY Trigger: GTAGACAACCTTCCGAAGAGTATGAGGATGGCCTCAGAGGAAGGCCATTTTCTGCTTCAGCTGAATAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 72 bp | TCATCCAAGTTCAGGTATAGGGCTAGTCTTCCATTCTaGAGCTCTAGGGTGATGTGGTCTCCACGTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSKFRYRASLPF*SSRVMWSPRCP Trigger: AGGACAACGTGGAGACCACATCACCCTAGAGCTCCAGAATGGAAGACTAGCCCTATACCTGAACTTGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CCA 72 bp | CTGGCATGGCGGAGGGCTGCCTTCAATGGTGCGATATaGTTATATTGGACTGAAGAGAGGCATCCAACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LAWRRAAFNGAI*LYWTEERHPTK Trigger: TTTTGTTGGATGCCTCTCTTCAGTCCAATATAACCATATCGCACCATTGAAGGCAGCCCTCCGCCATGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 72 bp | CTCCAGTCACATCAGAGTCTATCATGGAGTCACAGCTaGACTCTGTCAAAGTCCCTTGAACAGTCACAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LQSHQSLSWSHS*TLSKSLEQSQE Trigger: CTCCTGTGACTGTTCAAGGGACTTTGACAGAGTCCAGCTGTGACTCCATGATAGACTCTGATGTGACTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CAA 90 bp | CCTTCGGTGAGAGGAAAGAGGCCAATGGGTCATCACAATTGTAATTaGTCGCTGTTAATCCAACGTGCCACAAGCCAGACAGCACCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSVRGKRPMGHHNCN*SLLIQRATSQTAPK Trigger: CTTTGGTGCTGTCTGGCTTGTGGCACGTTGGATTAACAGCGACAAATTACAATTGTGATGACCCATTGGCCTCTTTCCTCTCACCGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS TCA 72 bp | TCCCAGGTTTACTTGGTACTGGAATTCCTCCAAAACTaGGCTCATAGTCGATGTCCAGGGCATCAGTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SQVYLVLEFLQN*AHSRCPGHQCH Trigger: GTGACACTGATGCCCTGGACATCGACTATGAGCTCAGTTTTGGAGGAATTCCAGTACCAAGTAAACCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CCA 72 bp | TCCATAGACCTCCACTCTCATGCCAATCTTTCCGTTTaGATTCCATTCCAAGGGCACAAAGCGAACAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SIDLHSHANLSV*IPFQGHKANKA Trigger: CGCTTTGTTCGCTTTGTGCCCTTGGAATGGAATCCAAACGGAAAGATTGGCATGAGAGTGGAGGTCTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CCA 72 bp | ATGCAGCCTTGGAAAGCCTTAATGGGATTTAAGCATTaGGAATCGGTGAGATTGTCAGGGCACCCTCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: MQPWKALMGFKH*ESVRLSGHPPK Trigger: CTTTGGAGGGTGCCCTGACAATCTCACCGATTCCCAATGCTTAAATCCCATTAAGGCTTTCCAAGGCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CCA 72 bp | ATGGAAAGTTCTGGCCCATCTCGGCTCATCTTCACCTaGTGTACTCTTCTATTGGCAAGATTCTCTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MESSGPSRLIFT*CTLLLARFSVL Trigger: CAGCACAGAGAATCTTGCCAATAGAAGAGTACACCAGGTGAAGATGAGCCGAGATGGGCCAGAACTTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CAA 90 bp | CGTTGTCCTTCCCCATGGAACAGAACCCCATCTCCTTGCATGCTCTaGAATTTCAGGGAGATCACATCTTTGAGGGTACTCATTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RCPSPWNRTPSPCML*NFREITSLRVLIVF Trigger: GAAGACAATGAGTACCCTCAAAGATGTGATCTCCCTGAAATTCAAGAGCATGCAAGGAGATGGGGTTCTGTTCCATGGGGAAGGACAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
||
| CDS CAA 90 bp | AGGTGGCTCCTGTGTAACCAGTATTACTGCAGTTGCAGTAGAAGTTaGTCCAGGTTTGAGTACAGTGTCCTCCATGTTCACAGTAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RWLLCNQYYCSCSRS*SRFEYSVLHVHSSW Trigger: CCAACTACTGTGAACATGGAGGACACTGTACTCAAACCTGGACAAACTTCTACTGCAACTGCAGTAATACTGGTTACACAGGAGCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS GCA 72 bp | GACAGGTGGCTCCTGTGTAACCAGTATTACTGCAGTTaGAGTAGAAGTTTGTCCAGGTTTGAGTACAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DRWLLCNQYYCS*SRSLSRFEYSV Trigger: GACACTGTACTCAAACCTGGACAAACTTCTACTGCAACTGCAGTAATACTGGTTACACAGGAGCCACCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS GCA 72 bp | AGAGAAATTGAGGTAGAGCAAGAGGGTGGGAGCTTGTaGTGTCATAAAACTCAGTGTGATGGCTTCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: REIEVEQEGGSL*CHKTQCDGFLG Trigger: TCCAAGGAAGCCATCACACTGAGTTTTATGACAGCACAAGCTCCCACCCTCTTGCTCTACCTCAATTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
||
| CDS CAA 72 bp | ACGTTGTCCTTCCCCATGGAACAGAACCCCATCTCCTaGCATGCTCTTGAATTTCAGGGAGATCACATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TLSFPMEQNPIS*HALEFQGDHIF Trigger: AAAGATGTGATCTCCCTGAAATTCAAGAGCATGCAAGGAGATGGGGTTCTGTTCCATGGGGAAGGACAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
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| CDS CAA 72 bp | AGCTGTGTTTCCTCTGTGTCTGTATACCTCACAGGATaGCTCATAGATGGAATCATGACAGGTGGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SCVSSVSVYLTG*LIDGIMTGGSC Trigger: ACAGGAGCCACCTGTCATGATTCCATCTATGAGCAATCCTGTGAGGTATACAGACACAGAGGAAACACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 72 bp | GCAACTTCTGGATCCAACCCAAGAGTTTCTGTAACTTaGCCTAGGATGAGTGACCTCACTGTTTGGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: ATSGSNPRVSVT*PRMSDLTVWNS Trigger: GGAGTTCCAAACAGTGAGGTCACTCATCCTAGGCAAAGTTACAGAAACTCTTGGGTTGGATCCAGAAGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 90 bp | CATGTTTCCTATAAATGTCCAGATGCTGTCTCCTTGCTTGTACTGTaGCCAGTTGTGCCCTGTGTCGCTGAATATCAGGCAATAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: HVSYKCPDAVSLLVL*PVVPCVAEYQAIAC Trigger: ACAAGCTATTGCCTGATATTCAGCGACACAGGGCACAACTGGCAACAGTACAAGCAAGGAGACAGCATCTGGACATTTATAGGAAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
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| CDS CAA 90 bp | CTCAGTGTTGGAACCCTGTATCCAAGTCAACTCTGTGTTGTTGTGTaGAACCGTCATCCAGATCTTGTCCTCAGTAACATTGCAGTACAC | + |
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Preference number: 6 (lower is better) Translates to: LSVGTLYPSQLCVVV*NRHPDLVLSNIAVH Trigger: GTGTACTGCAATGTTACTGAGGACAAGATCTGGATGACGGTTCAACACAACAACACAGAGTTGACTTGGATACAGGGTTCCAACACTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 90 bp | AAAATTCTGAGAAGAGAAATTGAGGTAGAGCAAGAGGGTGGGAGCTaGTGCTGTCATAAAACTCAGTGTGATGGCTTCCTTGGATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: KILRREIEVEQEGGS*CCHKTQCDGFLGWS Trigger: GCTCCATCCAAGGAAGCCATCACACTGAGTTTTATGACAGCACAAGCTCCCACCCTCTTGCTCTACCTCAATTTCTCTTCTCAGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS TCA 72 bp | CCAGCTGCTCCATACTCCCACCATAATTTAAGTTCATaGCATAGGGTTTCTCAGTGTTGGAACCCTGTATCC | + |
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Preference number: 6 (lower is better) Translates to: PAAPYSHHNLSS*HRVSQCWNPVS Trigger: GGATACAGGGTTCCAACACTGAGAAACCCTATGTCATGAACTTAAATTATGGTGGGAGTATGGAGCAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS TCA 72 bp | GGCTGCCTTCAATGGTGCGATATGGTTATATTGGACTaGAGAGAGGCATCCAACAAAACCCAGTGTATTTGC | + |
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Preference number: 6 (lower is better) Translates to: GCLQWCDMVILD*REASNKTQCIC Trigger: GCAAATACACTGGGTTTTGTTGGATGCCTCTCTTCAGTCCAATATAACCATATCGCACCATTGAAGGCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS TCA 72 bp | TGGGTATTCCTTCTCCTTCATCTGATTGGTACGGTGTaGCTGCTTTTGCTGATAGAGGAAGTGCACCATGAT | + |
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Preference number: 6 (lower is better) Translates to: WVFLLLHLIGTV*LLLLIEEVHHD Trigger: ATCATGGTGCACTTCCTCTATCAGCAAAAGCAGTCACACCGTACCAATCAGATGAAGGAGAAGGAATACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS GCA 72 bp | CTGATTTGTAGAAGCATCCATAGACCTCCACTCTCATaGCAATCTTTCCGTTTGGATTCCATTCCAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LICRSIHRPPLS*QSFRLDSIPRA Trigger: TGCCCTTGGAATGGAATCCAAACGGAAAGATTGGCATGAGAGTGGAGGTCTATGGATGCTTCTACAAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
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| CDS GCA 72 bp | GTAACACGATTTCTCCTTGCATTGATGTTGACAGAATaGCACTGGCCATTATTCAAGCTTCTGCCTGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: VTRFLLALMLTE*HWPLFKLLPVR Trigger: CCTCACAGGCAGAAGCTTGAATAATGGCCAGTGGCATTCTGTCAACATCAATGCAAGGAGAAATCGTGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CCA 72 bp | CGATTTCTCCTTGCATTGATGTTGACAGAATGCCACTaGCCATTATTCAAGCTTCTGCCTGTGAGGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RFLLALMLTECH*PLFKLLPVRLS Trigger: TGAAAGCCTCACAGGCAGAAGCTTGAATAATGGCCAGTGGCATTCTGTCAACATCAATGCAAGGAGAAATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CCA 72 bp | CTCTGTGTCTGTATACCTCACAGGATTGCTCATAGATaGAATCATGACAGGTGGCTCCTGTGTAACCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: LCVCIPHRIAHR*NHDRWLLCNQY Trigger: ATACTGGTTACACAGGAGCCACCTGTCATGATTCCATCTATGAGCAATCCTGTGAGGTATACAGACACAGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 72 bp | AGAGGAAAGAGGCCAATGGGTCATCACAATTGTAATTaGTCGCTGTTAATCCAACGTGCCACAAGCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: RGKRPMGHHNCN*SLLIQRATSQT Trigger: TGTCTGGCTTGTGGCACGTTGGATTAACAGCGACAAATTACAATTGTGATGACCCATTGGCCTCTTTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
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| CDS CAA 72 bp | CTCCTTGATGTTTCTCTCAGCCTGGATGTAATGCCATaGGTTGTCATTCAGAGGATAAGGAGACTGGACAAG | + |
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Preference number: 6 (lower is better) Translates to: LLDVSLSLDVMP*VVIQRIRRLDK Trigger: CTTGTCCAGTCTCCTTATCCTCTGAATGACAACCAATGGCATTACATCCAGGCTGAGAGAAACATCAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 72 bp | AGAAGAGAAATTGAGGTAGAGCAAGAGGGTGGGAGCTaGTGCTGTCATAAAACTCAGTGTGATGGCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RREIEVEQEGGS*CCHKTQCDGFL Trigger: AAGGAAGCCATCACACTGAGTTTTATGACAGCACAAGCTCCCACCCTCTTGCTCTACCTCAATTTCTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 90 bp | TGTGTAACCAGTATTACTGCAGTTGCAGTAGAAGTTTGTCCAGGTTaGAGTACAGTGTCCTCCATGTTCACAGTAGTTGGGGAAACACCT | + |
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Preference number: 6 (lower is better) Translates to: CVTSITAVAVEVCPG*STVSSMFTVVGETP Trigger: AGGTGTTTCCCCAACTACTGTGAACATGGAGGACACTGTACTCAAACCTGGACAAACTTCTACTGCAACTGCAGTAATACTGGTTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS TCA 72 bp | ACAAAGCGGGCTCTCACAGCGTGCAGTAGCTTGTGGTaGACTACACTGTTAGCATTCATGTTTCCTATAAAT | + |
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Preference number: 6 (lower is better) Translates to: TKRALTACSSLW*TTLLAFMFPIN Trigger: ATTTATAGGAAACATGAATGCTAACAGTGTAGTTCACCACAAGCTACTGCACGCTGTGAGAGCCCGCTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086738.10 |
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| CDS TCA 72 bp | GAACCCTGTATCCAAGTCAACTCTGTGTTGTTGTGTTaGACCGTCATCCAGATCTTGTCCTCAGTAACATTG | + |
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Preference number: 6 (lower is better) Translates to: EPCIQVNSVLLC*TVIQILSSVTL Trigger: CAATGTTACTGAGGACAAGATCTGGATGACGGTTCAACACAACAACACAGAGTTGACTTGGATACAGGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS GCA 72 bp | AATCATGACAGGTGGCTCCTGTGTAACCAGTATTACTaGAGTTGCAGTAGAAGTTTGTCCAGGTTTGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: NHDRWLLCNQYY*SCSRSLSRFEY Trigger: GTACTCAAACCTGGACAAACTTCTACTGCAACTGCAGTAATACTGGTTACACAGGAGCCACCTGTCATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS GCA 72 bp | GGTCTACTTTCTGCCCATTCAAGTGTAATGAACGGATaGATCCAAGAAAGCCTTTCTGTCTTGATGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: GLLSAHSSVMNG*IQESLSVLMMS Trigger: GGACATCATCAAGACAGAAAGGCTTTCTTGGATGCATCCGTTCATTACACTTGAATGGGCAGAAAGTAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 72 bp | AGTATTACTGCAGTTGCAGTAGAAGTTTGTCCAGGTTaGAGTACAGTGTCCTCCATGTTCACAGTAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SITAVAVEVCPG*STVSSMFTVVG Trigger: CCCAACTACTGTGAACATGGAGGACACTGTACTCAAACCTGGACAAACTTCTACTGCAACTGCAGTAATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 72 bp | CTGTGTAACCAGTATTACTGCAGTTGCAGTAGAAGTTaGTCCAGGTTTGAGTACAGTGTCCTCCATGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: LCNQYYCSCSRS*SRFEYSVLHVH Trigger: GTGAACATGGAGGACACTGTACTCAAACCTGGACAAACTTCTACTGCAACTGCAGTAATACTGGTTACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 72 bp | GGAACCCTGTATCCAAGTCAACTCTGTGTTGTTGTGTaGAACCGTCATCCAGATCTTGTCCTCAGTAACATT | + |
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Preference number: 6 (lower is better) Translates to: GTLYPSQLCVVV*NRHPDLVLSNI Trigger: AATGTTACTGAGGACAAGATCTGGATGACGGTTCAACACAACAACACAGAGTTGACTTGGATACAGGGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS TCA 72 bp | TCTTCGGAAGGTTGTCTACATGTAATAAGGTCTCCTTaGTGTTTCTCTCAGCCTGGATGTAATGCCATTGGT | + |
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Preference number: 6 (lower is better) Translates to: SSEGCLHVIRSP*CFSQPGCNAIG Trigger: ACCAATGGCATTACATCCAGGCTGAGAGAAACATCAAGGAGACCTTATTACATGTAGACAACCTTCCGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS CAA 72 bp | AGTGTGAGAGTAACACGATTTCTCCTTGCATTGATGTaGACAGAATGCCACTGGCCATTATTCAAGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SVRVTRFLLALM*TECHWPLFKLL Trigger: CAGAAGCTTGAATAATGGCCAGTGGCATTCTGTCAACATCAATGCAAGGAGAAATCGTGTTACTCTCACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS TCA 72 bp | ATGTGTAAATCACTAAAATTCCCCAGGGAACCTTGCTaGACTGAAATGAGGTCCTTGGGCTGGTTATCAATA | + |
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Preference number: 6 (lower is better) Translates to: MCKSLKFPREPC*TEMRSLGWLSI Trigger: TATTGATAACCAGCCCAAGGACCTCATTTCAGTTCAGCAAGGTTCCCTGGGGAATTTTAGTGATTTACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS GCA 72 bp | ATCATTATCCAGTGTGAGAGTAACACGATTTCTCCTTaGATTGATGTTGACAGAATGCCACTGGCCATTATT | + |
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Preference number: 6 (lower is better) Translates to: IIIQCESNTISP*IDVDRMPLAII Trigger: AATAATGGCCAGTGGCATTCTGTCAACATCAATGCAAGGAGAAATCGTGTTACTCTCACACTGGATAATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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| CDS TCA 72 bp | AAATGTTACAATTGCTATGACACCTCCAATGAATGCTaGGTCACTCTGGATTGTATTTGTGAGTGGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: KCYNCYDTSNEC*VTLDCICEWFM Trigger: CATGAACCACTCACAAATACAATCCAGAGTGACTCAGCATTCATTGGAGGTGTCATAGCAATTGTAACATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086738.10 ENSMUST00000188735.2 |
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