Pregenerated sensors for CNTNAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033063Ensembl transcript IDs: ENSMUST00000091554.6
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGCTGGCCCAGGAAGAATaGGATTGCCAAGAGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PCIPEPWRCRLFSSILYTLAQEE*DCQEAG Trigger: GCCTGCCTCTTGGCAATCCCATTCTTCCTGGGCCAG...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGCAGGAAGAATGGGATTaGCAAGAGGCAGGCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PCIPEPWRCRLFSSILYTQEEWD*QEAGQP Trigger: TGGCTGGCCTGCCTCTTGGCAATCCCATTCTTCCTG...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGTCTGTAAACTGGCACTaGACACTCCCTGGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PCIPEPWRCRLFSSILYTSVNWH*TLPGPG Trigger: TCCTGGGCCAGGGAGTGTCCAGTGCCAGTTTACAGA...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR TCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTGAGGGAGAGTTTTGCTaGGGAAGGGAGCCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: DKKCICKSYSDCMVLILAEGEFC*GREPAS Trigger: GGAGGCTGGCTCCCTTCCTCAGCAAAACTCTCCCTC...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR CCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAGCACTGGACACTCCCTaGCCCAGGAAGAATGGGATT | + |
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Preference number: 2 (lower is better) Translates to: TSMKMRILGADLRQRRFIALDTP*PRKNGI Trigger: AATCCCATTCTTCCTGGGCCAGGGAGTGTCCAGTGC...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGAGTCACCTAGAAGACTaGTTCTGTTTCAACTCATAT | + |
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Preference number: 2 (lower is better) Translates to: PCIPEPWRCRLFSSILYTSHLED*FCFNSY Trigger: ATATGAGTTGAAACAGAAGCAGTCTTCTAGGTGACT...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR TCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAGAAACTACTCCACCATaGTTAATGACCACACTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TSMKMRILGADLRQRRFIETTPP*LMTTLP Trigger: AGGGAGTGTGGTCATTAATCATGGTGGAGTAGTTTC...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR TCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAACTGGACAGAGAGGATaGTATACAGTATTTATGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TSMKMRILGADLRQRRFITGQRG*YTVFMP Trigger: GGGCATAAATACTGTATATCATCCTCTCTGTCCAGT...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR CCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTGTCCTCTCTTTGTATTaGCCAGCAAACAGGAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: DKKCICKSYSDCMVLILAVLSLY*PANRKV Trigger: AACTTTCCTGTTTGCTGGCCAATACAAAGAGAGGAC...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR TCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATACTGTTTGACTTTATCTaGATGAAAGTTCTGTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: TSMKMRILGADLRQRRFILFDFI*MKVLSH Trigger: ATGGGACAGAACTTTCATTCAGATAAAGTCAAACAG...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR CCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAGTGCTAATGTTGAAGTaGGATATTTCAAACTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TSMKMRILGADLRQRRFIVLMLK*DISNFP Trigger: GGGAAAGTTTGAAATATCCCACTTCAACATTAGCAC...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR CCA 72 bp | CTGTTAGTCCTCTGTAAACTGGCACTGGACACTCCCTaGCCCAGGAAGAATGGGATTGCCAAGAGGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: LLVLCKLALDTP*PRKNGIAKRQA Trigger: GGCCTGCCTCTTGGCAATCCCATTCTTCCTGGGCCAGGGAGTGTCCAGTGCCAGTTTACAGAGGACTAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR GCA 72 bp | GCCAAGAGGCAGGCCAGCCATAGTCACCTAGAAGACTaGTTCTGTTTCAACTCATATTTCACTTTTGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: AKRQASHSHLED*FCFNSYFTFES Trigger: GCTCTCAAAAGTGAAATATGAGTTGAAACAGAAGCAGTCTTCTAGGTGACTATGGCTGGCCTGCCTCTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR CAA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTCTAGGAGGGAGAGTTTaGCTGAGGAAGGGAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: DKKCICKSYSDCMVLILALGGRV*LRKGAS Trigger: GCTGGCTCCCTTCCTCAGCAAAACTCTCCCTCCTAG...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR CAA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTTTTCCAGTCCTCTCTTaGTATTGGCCAGCAAACAGG | + |
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Preference number: 3 (lower is better) Translates to: DKKCICKSYSDCMVLILAFPVLS*YWPANR Trigger: CCTGTTTGCTGGCCAATACAAAGAGAGGACTGGAAA...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR TCA 72 bp | CCCTTCAGTTTACACCATAAAACTGGACAGAGAGGATaGTATACAGTATTTATGCCCAAAGCAATTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: PFSLHHKTGQRG*YTVFMPKAIPA Trigger: AGCTGGAATTGCTTTGGGCATAAATACTGTATATCATCCTCTCTGTCCAGTTTTATGGTGTAAACTGAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR CAA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTTCCCTTGCTTGTAAATaGCTAGGAGGGAGAGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DKKCICKSYSDCMVLILASLACK*LGGRVL Trigger: CAAAACTCTCCCTCCTAGCAATTTACAAGCAAGGGA...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR GCA 72 bp | ATAAAACTGGACAGAGAGGATGATATACAGTATTTATaGCCAAAGCAATTCCAGCTTTGGAAAAGGATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IKLDREDDIQYL*PKQFQLWKRIG Trigger: CCCAATCCTTTTCCAAAGCTGGAATTGCTTTGGGCATAAATACTGTATATCATCCTCTCTGTCCAGTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR CCA 72 bp | TTCAACCTCGTTAGTCCTTCACAGACAATCAGTATCTaGATCCTAGTGAATGTAGCATCATTGACTTTACTA | + |
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Preference number: 3 (lower is better) Translates to: FNLVSPSQTISI*ILVNVASLTLL Trigger: TAGTAAAGTCAATGATGCTACATTCACTAGGATCCAGATACTGATTGTCTGTGAAGGACTAACGAGGTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR CAA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTATACTAGGAGCAGACTaGAGACAGAGGAGATTCATA | + |
|
Preference number: 3 (lower is better) Translates to: DKKCICKSYSDCMVLILAILGAD*RQRRFI Trigger: TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTAT...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR-3UTR CAA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTTCGACTTGGGTGTTGTaGAGTAAGAAGCAATATTTA | + |
|
Preference number: 3 (lower is better) Translates to: DKKCICKSYSDCMVLILASTWVL*SKKQYL Trigger: TAAATATTGCTTCTTACTCAACAACACCCAAGTCGA...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| 3UTR TCA 72 bp | GGGGCTCTTAAGCTGGAGCTAATTTGTCTAATAAATTaGGAAGATGTACCTATTCAGTATAGTCATAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GALKLELICLIN*EDVPIQYSHRN Trigger: ATTTCTATGACTATACTGAATAGGTACATCTTCTCAATTTATTAGACAAATTAGCTCCAGCTTAAGAGCCCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGAGCCAGGGCCATGACTaGTGGACAGCTGTGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTSQGHD*WTAVRS Trigger: GCTCCTCACAGCTGTCCAGCAGTCATGGCCCTGGCT...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR TCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGCTATCTGGAGGTCACTaGAGCTGCCCAGCACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTLSGGH*SCPALP Trigger: AGGGAGTGCTGGGCAGCTTCAGTGACCTCCAGATAG...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGAGTACAGAGTGCCAGTaGCGGTCATCCAGAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTSTECQ*RSSRRL Trigger: CAGCCTTCTGGATGACCGGCACTGGCACTCTGTACT...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGGAAGGGCTACCTCTGTaGCTGTGGGCTTCACAAGAC | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTEGLPL*LWASQD Trigger: GTCTTGTGAAGCCCACAGGCACAGAGGTAGCCCTTC...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGGGATCCAGAATGACCTaGATCCATAGAGGGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTGSRMT*IHRGPW Trigger: CCAGGGCCCTCTATGGATGCAGGTCATTCTGGATCC...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR TCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTAAGAGAGGCAGCCTGTaGAGCCCTGAGCGGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAKRGSL*SPERLP Trigger: AGGCAGCCGCTCAGGGCTTCACAGGCTGCCTCTCTT...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGCTGCTCACAGTGCTCTaGAACATTCACCACAGCATG | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTLLTVL*NIHHSM Trigger: CATGCTGTGGTGAATGTTGCAGAGCACTGTGAGCAG...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGACCTGCTGCTCACAGTaGTCTGCAACATTCACCACA | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTTCCSQ*SATFTT Trigger: TGTGGTGAATGTTGCAGAGCACTGTGAGCAGCAGGT...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR TCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAACTAGGGGCAGGGTCTaGACAGACAGCAGCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFITRGRV*TDSSSR Trigger: TCTGCTGCTGCTGTCTGTTCAGACCCTGCCCCTAGT...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR TCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAGGGTGGCCACAGCAGTaGCCTCCATTCGTTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIGWPQQ*PPFVLQ Trigger: TTGGAGAACGAATGGAGGTCACTGCTGTGGCCACCC...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR TCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGTATTATGGAGCTCAATaGGTACAGAGTGCCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTYYGAQ*VQSASA Trigger: GGCACTGGCACTCTGTACTCATTGAGCTCCATAATA...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR TCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGGAAGAGATGCACCCTTaGCATTCCTTTCTGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTEEMHP*HSFLLS Trigger: TGAGAGCAGAAAGGAATGTCAAGGGTGCATCTCTTC...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAGAAGCCCTGAGCGGCTaGCTGCTGTGTTTCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIEALSG*LLCFRI Trigger: GATCCTGAAACACAGCAGGCAGCCGCTCAGGGCTTC...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR TCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAATGCTCTGCAAGGGTTaGCCAGGCTCAGAGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIMLCKG*PGSERF Trigger: GAACCTCTCTGAGCCTGGTCAACCCTTGCAGAGCAT...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGAGCATAGGAGAAGGTTaGAGAATGCATGTGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTSIGEG*RMHVSF Trigger: GAAGGACACATGCATTCTGCAACCTTCTCCTATGCT...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGGTCTACCTGAAGAGATaGACCCTTGACATTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTVYLKR*TLDIPF Trigger: GAAAGGAATGTCAAGGGTGCATCTCTTCAGGTAGAC...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR CCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGACTCAGGAAAGTCACTaGAATTGTCTGTGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTTQESH*NCLWLW Trigger: CCACAACCACAGACAATTCCAGTGACTTTCCTGAGT...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR CCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGAAAAGGTCACTTCTGTaGGAGCACGCAACTCTATTC | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTKRSLL*EHATLF Trigger: GAATAGAGTTGCGTGCTCCCACAGAAGTGACCTTTT...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR TCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTGTACGGCACCTGTTGTaGTGCTCTGCAAGGGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAVRHLL*CSARVD Trigger: GTCAACCCTTGCAGAGCATCACAACAGGTGCCGTAC...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR TCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATACTGTTATTCCTCCAATaGCCCCAGGGTCACTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFILLFLQ*PQGHSC Trigger: ACAGGAGTGACCCTGGGGTCATTGGAGGAATAACAG...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTCTGCCCAGCACTCCCTaGTGTACTGCAATAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILALPSTP*CTAIGS Trigger: GGATCCTATTGCAGTACAGCAGGGAGTGCTGGGCAG...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATATGTAGGTCCACCTGCTaGTCACAGTGCTCTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFICRSTC*SQCSAT Trigger: TGTTGCAGAGCACTGTGAGCAGCAGGTGGACCTACA...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR GCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATATTCTGCACAATGAGCTaGAGCAGCCACACTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIFCTMS*SSHTAL Trigger: CAAGGCAGTGTGGCTGCTGCAGCTCATTGTGCAGAA...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR CCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGAAGACTGTTCATAGATaGAGGAATGGCAGGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTKTVHR*RNGRLF Trigger: GAACAACCTGCCATTCCTCCATCTATGAACAGTCTT...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR CCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAAGCAGCTTCAGAGTATaGTCGGCCTGTGTCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFISSFRV*SACVCH Trigger: GTGACAGACACAGGCCGACCATACTCTGAAGCTGCT...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR TCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTACAGACATCAGGGTCTaGGCAGTGTCTCCATCTACC | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILATDIRV*AVSPST Trigger: GGTAGATGGAGACACTGCTCAGACCCTGATGTCTGT...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR GCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAAGCATGCAGCTGTGCTaGATTGGCAGCATAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFISMQLC*IGSIGE Trigger: TTCTCCTATGCTGCCAATGCAGCACAGCTGCATGCT...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR GCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTAGACAGTTTCCTCTCTaGAGAACCAGGGCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILARQFPL*RTRAFC Trigger: GCAGAAGGCCCTGGTTCTGCAGAGAGGAAACTGTCT...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR GCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTGGGCTGTCTATCTTCTaGGGATCCAGAATGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAGLSIF*GSRMTC Trigger: GCAGGTCATTCTGGATCCGCAGAAGATAGACAGCCC...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGTGTTGTCCTTTTCCATaGAATATAATCCCGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTCCPFP*NIIPLF Trigger: GAACAGCGGGATTATATTCCATGGAAAAGGACAACA...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTAGCCTCAGGCAGCCCTaGAAGCCTCCAAAAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILASLRQP*KPPKEC Trigger: ACATTCTTTTGGAGGCTTCCAGGGCTGCCTGAGGCT...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAATGCATGTGTCCTTCTaGACCACCTCTGACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIMHVSF*TTSDCH Trigger: GTGACAGTCAGAGGTGGTCCAGAAGGACACATGCAT...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTATCCATAGAGGGCCCTaGAGACAGTTTCCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAIHRGP*RQFPLC Trigger: GCAGAGAGGAAACTGTCTCCAGGGCCCTCTATGGAT...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR GCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATACAGGTAGCTGGTGTTTaGACTCAGGGTGGAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIQVAGV*TQGGIF Trigger: GAATATTCCACCCTGAGTGCAAACACCAGCTACCTG...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATACACTGGAATTGTCTGTaGTTGTGGGCATGTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIHWNCL*LWACEG Trigger: TCCTTCACATGCCCACAACCACAGACAATTCCAGTG...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAGAACCCGTATGGCTATaGCAGACACACAGAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIEPVWL*QTHRAK Trigger: TTTTGCTCTGTGTGTCTGCCATAGCCATACGGGTTC...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR TCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTCTGCTGAAGGATAACTaGGGCAAAGAAGAAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILALLKDN*GKEEAN Trigger: GTTGGCTTCTTCTTTGCCTCAGTTATCCTTCAGCAG...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR TCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTAAGAAGCCTCGGTGTTaGAGGAAGCTGAGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAKKPRC*RKLSSK Trigger: TTTGGAACTCAGCTTCCTTCAACACCGAGGCTTCTT...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR TCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTCCTCTGTGTTTCTCTTaGCACATTCCCCCATTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAPLCFS*HIPPFR Trigger: TCGAAATGGGGGAATGTGTCAAGAGAAACACAGAGG...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR GCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAAACTTGTACCTCACCTaGAAACTTCCATTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFINLYLT*KLPLLA Trigger: GGCCAACAATGGAAGTTTGCAGGTGAGGTACAAGTT...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGTTCATATGCATATTATaGAGCTCAATGAGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCIPEPWRCRLFSSILYTFICIL*SSMSTE Trigger: CTCTGTACTCATTGAGCTCCATAATATGCATATGAA...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTGCAGTATACAAGAAATaGTGCCAGTGGTCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAAVYKK*CQWSTS Trigger: GGAAGTGGACCACTGGCACCATTTCTTGTATACTGC...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTGGACTATTGTGTCACTaGTCCATTCATTCCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAGLLCH*SIHSGQ Trigger: CTGACCGGAATGAATGGACCAGTGACACAATAGTCC...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTCTCTCCACGGAAGGTTaGGAAATGAAGGTAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILALSTEG*EMKVRS Trigger: GCTTCTTACCTTCATTTCCCAACCTTCCGTGGAGAG...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| 3UTR CAA 72 bp | ATTTATGCCCAAAGCAATTCCAGCTTTGGAAAAGGATaGGGGGCTCTTAAGCTGGAGCTAATTTGTCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: IYAQSNSSFGKG*GALKLELICLI Trigger: TATTAGACAAATTAGCTCCAGCTTAAGAGCCCCCAATCCTTTTCCAAAGCTGGAATTGCTTTGGGCATAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR TCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATACCACTGATATTTATTTaGTACAAGCGGTGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIPLIFI*YKRCPS Trigger: GGATGGACACCGCTTGTATCAAATAAATATCAGTGG...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR TCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTTTTCTCTGGACAGTATaGCATCCCCATGCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAFLWTV*HPHAMK Trigger: CTTCATTGCATGGGGATGTCATACTGTCCAGAGAAA...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATATGCATTTGTGTTTCCTaGAAATCCCGAGATGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFICICVS*KSRDAF Trigger: GAAAGCATCTCGGGATTTCCAGGAAACACAAATGCA...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR GCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTCTCTACAGAGACTACTaGTTCTTCCCTGTTAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILALYRDY*FFPVNR Trigger: ACGATTAACAGGGAAGAAGCAGTAGTCTCTGTAGAG...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| 3UTR CAA 72 bp | AAAAGCAATGTACCAAAAATATTTCCAGTCCTCTCTTaGTATTGGCCAGCAAACAGGAAAGTTGCTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSNVPKIFPVLS*YWPANRKVAVF Trigger: AAAGACAGCAACTTTCCTGTTTGCTGGCCAATACAAAGAGAGGACTGGAAATATTTTTGGTACATTGCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR TCA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATACACCTCAGATTTGTATaGACACCCATATACTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TSMKMRILGADLRQRRFIHLRFV*TPIYFY Trigger: ATAGAAGTATATGGGTGTTCATACAAATCTGAGGTG...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CCA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTATGAAAATTTTTATGTaGGAATGTCAGGAAACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DKKCICKSYSDCMVLILAMKIFM*ECQETP Trigger: GGGCGTTTCCTGACATTCCCACATAAAAATTTTCAT...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS TCA 90 bp | TCAGTGGGACTTCCAGGCCAAATCTCACAGAAGAGAGGCAGCCTGTaGAGCCCTGAGCGGCTGCCTGCTGTGTTTCAGGATCAGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVGLPGQISQKRGSL*SPERLPAVFQDQHP Trigger: TGGATGCTGATCCTGAAACACAGCAGGCAGCCGCTCAGGGCTTCACAGGCTGCCTCTCTTCTGTGAGATTTGGCCTGGAAGTCCCACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS GCA 90 bp | CCCAGGGTCACTCCTGTCTGTGTTAGGAAGGGGCTGTCTATCTTCTaGGGATCCAGAATGACCTGCATCCATAGAGGGCCCTGGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: PRVTPVCVRKGLSIF*GSRMTCIHRGPWRQ Trigger: CTGTCTCCAGGGCCCTCTATGGATGCAGGTCATTCTGGATCCGCAGAAGATAGACAGCCCCTTCCTAACACAGACAGGAGTGACCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS GCA 90 bp | CCTGTATCTGAGGGCCCTGAGGTCCTACATTGTAGGTCCACCTGCTaGTCACAGTGCTCTGCAACATTCACCACAGCATGCAGCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVSEGPEVLHCRSTC*SQCSATFTTACSCA Trigger: AGCACAGCTGCATGCTGTGGTGAATGTTGCAGAGCACTGTGAGCAGCAGGTGGACCTACAATGTAGGACCTCAGGGCCCTCAGATACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS TCA 90 bp | GCATCACAATTGTGTGGATCTCCTGCTGCTACTAGGGGCAGGGTCTaGACAGACAGCAGCAGCAGAAGCAGCAACGCATCCAGGAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASQLCGSPAATRGRV*TDSSSRSSNASRNA Trigger: AGCATTCCTGGATGCGTTGCTGCTTCTGCTGCTGCTGTCTGTTCAGACCCTGCCCCTAGTAGCAGCAGGAGATCCACACAATTGTGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS TCA 90 bp | CTGTCTGTGTTAGGAAGGGGCTGTCTATCTTCTGCGGATCCAGAATaGCCTGCATCCATAGAGGGCCCTGGAGACAGTTTCCTCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSVLGRGCLSSADPE*PASIEGPGDSFLSA Trigger: TGCAGAGAGGAAACTGTCTCCAGGGCCCTCTATGGATGCAGGTCATTCTGGATCCGCAGAAGATAGACAGCCCCTTCCTAACACAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS GCA 90 bp | CACCACAGCATGCAGCTGTGCTGCATTGGCAGCATAGGAGAAGGTTaGAGAATGCATGTGTCCTTCTGGACCACCTCTGACTGTCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: HHSMQLCCIGSIGEG*RMHVSFWTTSDCHY Trigger: GTAGTGACAGTCAGAGGTGGTCCAGAAGGACACATGCATTCTGCAACCTTCTCCTATGCTGCCAATGCAGCACAGCTGCATGCTGTGGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS GCA 90 bp | TGTGTTAGGAAGGGGCTGTCTATCTTCTGCGGATCCAGAATGACCTaGATCCATAGAGGGCCCTGGAGACAGTTTCCTCTCTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: CVRKGLSIFCGSRMT*IHRGPWRQFPLCRT Trigger: GGTTCTGCAGAGAGGAAACTGTCTCCAGGGCCCTCTATGGATGCAGGTCATTCTGGATCCGCAGAAGATAGACAGCCCCTTCCTAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS CCA 90 bp | TGCATTGGCAGCATAGGAGAAGGTTGCAGAATGCATGTGTCCTTCTaGACCACCTCTGACTGTCACTACATCGGGGCCTCCATGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CIGSIGEGCRMHVSF*TTSDCHYIGASMLN Trigger: GTTCAGCATGGAGGCCCCGATGTAGTGACAGTCAGAGGTGGTCCAGAAGGACACATGCATTCTGCAACCTTCTCCTATGCTGCCAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS TCA 90 bp | CCTTCTGGACCACCTCTGACTGTCACTACATCGGGGCCTCCATGCTaGACAACAGTCCATGCTGTGTCTGCTGTCATATTGCAGTATACA | + |
|
Preference number: 5 (lower is better) Translates to: PSGPPLTVTTSGPPC*TTVHAVSAVILQYT Trigger: TGTATACTGCAATATGACAGCAGACACAGCATGGACTGTTGTTCAGCATGGAGGCCCCGATGTAGTGACAGTCAGAGGTGGTCCAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CAA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGTGGAGGAATGGCAGGTaGTTCCAGTGTAGCCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PCIPEPWRCRLFSSILYTWRNGR*FQCSPC Trigger: GCACGGGCTACACTGGAACAACCTGCCATTCCTCCA...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS GCA 90 bp | AGGGTGAAGTTCATATGCATATTATGGAGCTCAATGAGTACAGAGTaGCAGTGCCGGTCATCCAGAAGGCTGCCTAAGGTGAAGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RVKFICILWSSMSTE*QCRSSRRLPKVKFM Trigger: CATGAACTTCACCTTAGGCAGCCTTCTGGATGACCGGCACTGGCACTCTGTACTCATTGAGCTCCATAATATGCATATGAACTTCACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CAA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGGGAAAGTCACTGGAATaGTCTGTGGTTGTGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PCIPEPWRCRLFSSILYTGKSLE*SVVVGM Trigger: CATGCCCACAACCACAGACAATTCCAGTGACTTTCC...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CAA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGCCAGGTAGCTGGTGTTaGCACTCAGGGTGGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: PCIPEPWRCRLFSSILYTPGSWC*HSGWNI Trigger: AATATTCCACCCTGAGTGCAAACACCAGCTACCTGG...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS GCA 90 bp | AAGTTCATATGCATATTATGGAGCTCAATGAGTACAGAGTGCCAGTaGCGGTCATCCAGAAGGCTGCCTAAGGTGAAGTTCATGATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KFICILWSSMSTECQ*RSSRRLPKVKFMIE Trigger: TTCTATCATGAACTTCACCTTAGGCAGCCTTCTGGATGACCGGCACTGGCACTCTGTACTCATTGAGCTCCATAATATGCATATGAACTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CAA 90 bp | CCCTGCATTCCAGAACCATGGAGATGCAGGCTATTTAGCTCTATTTTATACACGTTTCTAAGGTCAAAGTaGAAGGCATCTGCATTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PCIPEPWRCRLFSSILYTFLRSK*KASAFR Trigger: TCGGAATGCAGATGCCTTCAACTTTGACCTTAGAAA...CGTGTATAAAATAGAGCTAAATAGCCTGCATCTCCATGGTTCTGGAATGCAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CAA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATACAGCATAGGAGAAGGTaGCAGAATGCATGTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSMKMRILGADLRQRRFIQHRRR*QNACVL Trigger: AAGGACACATGCATTCTGCAACCTTCTCCTATGCTG...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CAA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTTGTCTTCTGAGGGAGTaGGTCTACCTGAAGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: DKKCICKSYSDCMVLILACLLRE*VYLKRC Trigger: GCATCTCTTCAGGTAGACCAACTCCCTCAGAAGACA...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
||
| CDS-3UTR CAA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTCCCTCTGTGTTTCTCTaGACACATTCCCCCATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DKKCICKSYSDCMVLILAPSVFL*THSPIS Trigger: CGAAATGGGGGAATGTGTCAAGAGAAACACAGAGGG...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR CAA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTCTTCCCTTAAACTACTaGGCAAAGCCAGGTAACTCC | + |
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Preference number: 5 (lower is better) Translates to: DKKCICKSYSDCMVLILALPLNY*AKPGNS Trigger: GGAGTTACCTGGCTTTGCCAAGTAGTTTAAGGGAAG...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR CAA 90 bp | ACATCAATGAAAATGAGAATACTAGGAGCAGACTTGAGACAGAGGAGATTCATAATAGGATCCACTACTTaGTCACCAACAGAGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: TSMKMRILGADLRQRRFIIGSTT*SPTEMS Trigger: GCTCATCTCTGTTGGTGACAAAGTAGTGGATCCTAT...TATGAATCTCCTCTGTCTCAAGTCTGCTCCTAGTATTCTCATTTTCATTGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS-3UTR CAA 90 bp | GACAAGAAATGTATCTGTAAAAGTTATAGTGACTGCATGGTGCTTATATTGGCTAATATGTGTCCCATGTaGTCCTTTTCCATGGAATAT | + |
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Preference number: 5 (lower is better) Translates to: DKKCICKSYSDCMVLILANMCPM*SFSMEY Trigger: ATATTCCATGGAAAAGGACAACATGGGACACATATT...AGCCAATATAAGCACCATGCAGTCACTATAACTTTTACAGATACATTTCTTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | CACAGAAGAGAGGCAGCCTGTGAAGCCCTGAGCGGCTaGCTGCTGTGTTTCAGGATCAGCATCCAGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: HRREAACEALSG*LLCFRISIQGF Trigger: GAACCCCTGGATGCTGATCCTGAAACACAGCAGGCAGCCGCTCAGGGCTTCACAGGCTGCCTCTCTTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS TCA 72 bp | CTTCCAGGCCAAATCTCACAGAAGAGAGGCAGCCTGTaGAGCCCTGAGCGGCTGCCTGCTGTGTTTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LPGQISQKRGSL*SPERLPAVFQD Trigger: ATCCTGAAACACAGCAGGCAGCCGCTCAGGGCTTCACAGGCTGCCTCTCTTCTGTGAGATTTGGCCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | GAGGGCCCTGAGGTCCTACATTGTAGGTCCACCTGCTaGTCACAGTGCTCTGCAACATTCACCACAGCATGC | + |
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Preference number: 6 (lower is better) Translates to: EGPEVLHCRSTC*SQCSATFTTAC Trigger: GCATGCTGTGGTGAATGTTGCAGAGCACTGTGAGCAGCAGGTGGACCTACAATGTAGGACCTCAGGGCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | TGCATCCATAGAGGGCCCTGGAGACAGTTTCCTCTCTaGAGAACCAGGGCCTTCTGCACAATGAGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CIHRGPWRQFPL*RTRAFCTMSCS Trigger: GCTGCAGCTCATTGTGCAGAAGGCCCTGGTTCTGCAGAGAGGAAACTGTCTCCAGGGCCCTCTATGGATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | CCTCTCTGCAGAACCAGGGCCTTCTGCACAATGAGCTaGAGCAGCCACACTGCCTTGAATAGTGACTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: PLCRTRAFCTMS*SSHTALNSDSS Trigger: GCTAGAGTCACTATTCAAGGCAGTGTGGCTGCTGCAGCTCATTGTGCAGAAGGCCCTGGTTCTGCAGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS TCA 72 bp | AGTGCCATAGCCCATCATTCAGTACGGCACCTGTTGTaGTGCTCTGCAAGGGTTGACCAGGCTCAGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SAIAHHSVRHLL*CSARVDQAQRG Trigger: ACCTCTCTGAGCCTGGTCAACCCTTGCAGAGCATCACAACAGGTGCCGTACTGAATGATGGGCTATGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | GAGGTCCTACATTGTAGGTCCACCTGCTGCTCACAGTaGTCTGCAACATTCACCACAGCATGCAGCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: EVLHCRSTCCSQ*SATFTTACSCA Trigger: AGCACAGCTGCATGCTGTGGTGAATGTTGCAGAGCACTGTGAGCAGCAGGTGGACCTACAATGTAGGACCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | AAGGGGCTGTCTATCTTCTGCGGATCCAGAATGACCTaGATCCATAGAGGGCCCTGGAGACAGTTTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: KGLSIFCGSRMT*IHRGPWRQFPL Trigger: GAGAGGAAACTGTCTCCAGGGCCCTCTATGGATGCAGGTCATTCTGGATCCGCAGAAGATAGACAGCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | ACTCCTGTCTGTGTTAGGAAGGGGCTGTCTATCTTCTaGGGATCCAGAATGACCTGCATCCATAGAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TPVCVRKGLSIF*GSRMTCIHRGP Trigger: GGGCCCTCTATGGATGCAGGTCATTCTGGATCCGCAGAAGATAGACAGCCCCTTCCTAACACAGACAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS CCA 72 bp | AGCATAGGAGAAGGTTGCAGAATGCATGTGTCCTTCTaGACCACCTCTGACTGTCACTACATCGGGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SIGEGCRMHVSF*TTSDCHYIGAS Trigger: GGAGGCCCCGATGTAGTGACAGTCAGAGGTGGTCCAGAAGGACACATGCATTCTGCAACCTTCTCCTATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS CAA 72 bp | AGCCACACTGCCTTGAATAGTGACTCTAGCCCGGTTTaGATTCAGTGCAGCCTTCAGTGGGACTTCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SHTALNSDSSPV*IQCSLQWDFQA Trigger: GGCCTGGAAGTCCCACTGAAGGCTGCACTGAATCAAAACCGGGCTAGAGTCACTATTCAAGGCAGTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS TCA 72 bp | CCACCTCTGACTGTCACTACATCGGGGCCTCCATGCTaGACAACAGTCCATGCTGTGTCTGCTGTCATATTG | + |
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Preference number: 6 (lower is better) Translates to: PPLTVTTSGPPC*TTVHAVSAVIL Trigger: CAATATGACAGCAGACACAGCATGGACTGTTGTTCAGCATGGAGGCCCCGATGTAGTGACAGTCAGAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS TCA 72 bp | TTAGGAAGGGGCTGTCTATCTTCTGCGGATCCAGAATaGCCTGCATCCATAGAGGGCCCTGGAGACAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LGRGCLSSADPE*PASIEGPGDSF Trigger: GAAACTGTCTCCAGGGCCCTCTATGGATGCAGGTCATTCTGGATCCGCAGAAGATAGACAGCCCCTTCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | ATGCAGCTGTGCTGCATTGGCAGCATAGGAGAAGGTTaGAGAATGCATGTGTCCTTCTGGACCACCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: MQLCCIGSIGEG*RMHVSFWTTSD Trigger: GTCAGAGGTGGTCCAGAAGGACACATGCATTCTGCAACCTTCTCCTATGCTGCCAATGCAGCACAGCTGCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | GCCTTGAATAGTGACTCTAGCCCGGTTTTGATTCAGTaGAGCCTTCAGTGGGACTTCCAGGCCAAATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: ALNSDSSPVLIQ*SLQWDFQAKSH Trigger: GTGAGATTTGGCCTGGAAGTCCCACTGAAGGCTGCACTGAATCAAAACCGGGCTAGAGTCACTATTCAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS CCA 72 bp | CTGCAACATTCACCACAGCATGCAGCTGTGCTGCATTaGCAGCATAGGAGAAGGTTGCAGAATGCATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LQHSPQHAAVLH*QHRRRLQNACV Trigger: GACACATGCATTCTGCAACCTTCTCCTATGCTGCCAATGCAGCACAGCTGCATGCTGTGGTGAATGTTGCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS TCA 72 bp | TTCAGTACGGCACCTGTTGTGATGCTCTGCAAGGGTTaGCCAGGCTCAGAGAGGTTCAGTATGAGTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FSTAPVVMLCKG*PGSERFSMSFP Trigger: TGGAAAACTCATACTGAACCTCTCTGAGCCTGGTCAACCCTTGCAGAGCATCACAACAGGTGCCGTACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS TCA 72 bp | GATGGTTTCTCTGGACAGTATGACATCCCCATGCAATaGAGAAGCCAGGTAGCTGGTGTTTGCACTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: DGFSGQYDIPMQ*RSQVAGVCTQG Trigger: ACCCTGAGTGCAAACACCAGCTACCTGGCTTCTTCATTGCATGGGGATGTCATACTGTCCAGAGAAACCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | TGCATATTATGGAGCTCAATGAGTACAGAGTGCCAGTaGCGGTCATCCAGAAGGCTGCCTAAGGTGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: CILWSSMSTECQ*RSSRRLPKVKF Trigger: GAACTTCACCTTAGGCAGCCTTCTGGATGACCGGCACTGGCACTCTGTACTCATTGAGCTCCATAATATGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS CCA 72 bp | CAAAGCCAGGTAACTCCCAGAACTCAGGAAAGTCACTaGAATTGTCTGTGGTTGTGGGCATGTGAAGGACAC | + |
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Preference number: 6 (lower is better) Translates to: QSQVTPRTQESH*NCLWLWACEGH Trigger: GTGTCCTTCACATGCCCACAACCACAGACAATTCCAGTGACTTTCCTGAGTTCTGGGAGTTACCTGGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS CAA 72 bp | ATTCAGTACGGCACCTGTTGTGATGCTCTGCAAGGGTaGACCAGGCTCAGAGAGGTTCAGTATGAGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: IQYGTCCDALQG*TRLREVQYEFS Trigger: GGAAAACTCATACTGAACCTCTCTGAGCCTGGTCAACCCTTGCAGAGCATCACAACAGGTGCCGTACTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | TCTGCATTCCGATGTCTGTCCAACTTGTACCTCACCTaGAAACTTCCATTGTTGGCCAGGATAATGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SAFRCLSNLYLT*KLPLLARIMER Trigger: CCTTTCCATTATCCTGGCCAACAATGGAAGTTTGCAGGTGAGGTACAAGTTGGACAGACATCGGAATGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS CAA 90 bp | TTCGAAGCTGAAAAGCGAGGGACATTTTATCTTCCCTTAAACTACTaGGCAAAGCCAGGTAACTCCCAGAACTCAGGAAAGTCACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FEAEKRGTFYLPLNY*AKPGNSQNSGKSLE Trigger: TTCCAGTGACTTTCCTGAGTTCTGGGAGTTACCTGGCTTTGCCAAGTAGTTTAAGGGAAGATAAAATGTCCCTCGCTTTTCAGCTTCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS GCA 72 bp | TATGGCAGACACACAGAGCAAAATAAATATCACAACTaGTGTTATTCCTCCAATGACCCCAGGGTCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: YGRHTEQNKYHN*CYSSNDPRVTP Trigger: AGGAGTGACCCTGGGGTCATTGGAGGAATAACAGCAGTTGTGATATTTATTTTGCTCTGTGTGTCTGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS CAA 72 bp | GAAAAGCGAGGGACATTTTATCTTCCCTTAAACTACTaGGCAAAGCCAGGTAACTCCCAGAACTCAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: EKRGTFYLPLNY*AKPGNSQNSGK Trigger: CTTTCCTGAGTTCTGGGAGTTACCTGGCTTTGCCAAGTAGTTTAAGGGAAGATAAAATGTCCCTCGCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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| CDS TCA 72 bp | AAAAACACATGTCCTGCCTTGTTCCATGTTCGAAGCTaGAAAGCGAGGGACATTTTATCTTCCCTTAAACTA | + |
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Preference number: 6 (lower is better) Translates to: KNTCPALFHVRS*KARDILSSLKL Trigger: TAGTTTAAGGGAAGATAAAATGTCCCTCGCTTTTCAGCTTCGAACATGGAACAAGGCAGGACATGTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091554.6 |
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