RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTNAP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000017167

Ensembl transcript IDs: ENSMUST00000103109.4

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTTTATTGAACCTGCTCAGTTGAGGGCACAGCAGGCTCTGCCCTaGACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGA +
Preference number: 1 (lower is better)
Translates to: CFIEPAQLRAQQALP*TRVEAQHVGEWLAG
Trigger: TCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAACTGAGCAGGTTCAATAAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CCA 90 bp CAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTaGCTGGCAGGACTCATGAGACATCAAACACAGAAGGAGCTCGCT +
Preference number: 1 (lower is better)
Translates to: QALPCTRVEAQHVGE*LAGLMRHQTQKELA
Trigger: AGCGAGCTCCTTCTGTGTTTGATGTCTCATGAGTCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CCA 90 bp CCCCTGCCCTTCGTTGTTAATCCTTGCCAGCAGCTGGGACAGAGATaGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGG +
Preference number: 1 (lower is better)
Translates to: PLPFVVNPCQQLGQR*QERPVSASWAFSCR
Trigger: CCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTGTCCCAGCTGCTGGCAAGGATTAACAACGAAGGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR GCA 90 bp TCCCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTaGCCTTCGTTGTTAATCCTTGCCAGCAGCTGGGACAGAGATGGC +
Preference number: 1 (lower is better)
Translates to: SLLIVYTGREAVHLP*PSLLILASSWDRDG
Trigger: GCCATCTCTGTCCCAGCTGCTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CCA 90 bp TCGGCCACTCCCTTTGGTCCCATCTGTAGCTCTGCGCACCAAACTTaGCAAGAGGGGAATCCTCCTGGTGAACAGAGCCTGCTTAGAAGA +
Preference number: 1 (lower is better)
Translates to: SATPFGPICSSAHQT*QEGNPPGEQSLLRR
Trigger: TCTTCTAAGCAGGCTCTGTTCACCAGGAGGATTCCCCTCTTGCCAAGTTTGGTGCGCAGAGCTACAGATGGGACCAAAGGGAGTGGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CCA 90 bp GCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGCAGCTaGGACAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTT +
Preference number: 1 (lower is better)
Translates to: AVHLPCPSLLILASS*DRDGRKGLSQHHGL
Trigger: AAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTGTCCCAGCTGCTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR CCA 90 bp CTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGACTCCCTGTCTCAGCATCATaGGCTTTCTCCTGTAGGGCA +
Preference number: 2 (lower is better)
Translates to: LPCTRVEAQHVGEWLAGLPVSAS*AFSCRA
Trigger: TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGG...GAGTCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR CCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTCAGCTGGGACAGAGATaGCAGGAAAGGCCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGQLGQR*QERPVS
Trigger: TGAGACAGGCCTTTCCTGCCATCTCTGTCCCAGCTG...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CAA 90 bp GATGAGCAGGGCATTGGTTTAGGCAGTGAGGCTCGGCCACTCCCTTaGGTCCCATCTGTAGCTCTGCGCACCAAACTTGGCAAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: DEQGIGLGSEARPLP*VPSVALRTKLGKRG
Trigger: TCCCCTCTTGCCAAGTTTGGTGCGCAGAGCTACAGATGGGACCAAAGGGAGTGGCCGAGCCTCACTGCCTAAACCAATGCCCTGCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CAA 90 bp GGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCATATTTaGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGCAGGGCATCT +
Preference number: 2 (lower is better)
Translates to: GEGQACAQAPRLLHI*KRGGRVEGWLGRAS
Trigger: AGATGCCCTGCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAAATATGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR GCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTCTGGTGAACAGAGCCTaGTTAGAAGAGCCAAATGTC +
Preference number: 2 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAILVNRA*LEEPNV
Trigger: GACATTTGGCTCTTCTAAGCAGGCTCTGTTCACCAG...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR TCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCACATTGGTTTAGGCAGTaGGGCTCGGCCACTCCCTTT +
Preference number: 2 (lower is better)
Translates to: QRWQERPVSASWAFSCRAHWFRQ*GSATPF
Trigger: AAAGGGAGTGGCCGAGCCTCACTGCCTAAACCAATG...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CAA 90 bp ATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTaGTTAATCCTTGCCAGCAGCTGGGACAGAGATGGCAGGAAAGGC +
Preference number: 2 (lower is better)
Translates to: IVYTGREAVHLPCPS*LILASSWDRDGRKG
Trigger: GCCTTTCCTGCCATCTCTGTCCCAGCTGCTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR TCA 90 bp CAAGAAATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGTGGGGGTGGGGGTGGTaGAGTTCTTCCCTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: QEIYIKNMTSWVNAAAFLWGWGW*SSSLSP
Trigger: GGGGCTGAGGGAAGAACTTCACCACCCCCACCCCCA...CAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATATTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR GCA 90 bp CAAGAAATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGGGAGAGGGCCAGGCCTaGGCACAGGCACCAAGGCTA +
Preference number: 2 (lower is better)
Translates to: QEIYIKNMTSWVNAAAFLGEGQA*AQAPRL
Trigger: TAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCC...CAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATATTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR TCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATATCCCTCAGCCCCAGCTaGGAGGAAGCAGATGGAAGA +
Preference number: 2 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQISLSPS*EEADGR
Trigger: TCTTCCATCTGCTTCCTCTCAGCTGGGGCTGAGGGA...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR CCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATAAGAGCCAAATGTCCCTaGCAAGGGAGGGGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIRAKCP*QGRGKA
Trigger: TGCCTTCCCCCTCCCTTGCCAGGGACATTTGGCTCT...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR CCA 90 bp CAAGAAATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGGGAAGAGTAGAGGGCTaGCTAGGCAGGGCATCTGCA +
Preference number: 2 (lower is better)
Translates to: QEIYIKNMTSWVNAAAFLGRVEG*LGRASA
Trigger: TGCAGATGCCCTGCCTAGCCAGCCCTCTACTCTTCC...CAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATATTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR CCA 90 bp CAAGAAATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGCAGGCAGGCTTTTTATaGCTTTGGCTGAAGCAAGTG +
Preference number: 2 (lower is better)
Translates to: QEIYIKNMTSWVNAAAFLQAGFL*LWLKQV
Trigger: CACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTG...CAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATATTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR CAA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCTCGGCCACTCCCTTaGGTCCCATCTGTAGCTCTG +
Preference number: 3 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAIARPLP*VPSVAL
Trigger: CAGAGCTACAGATGGGACCAAAGGGAGTGGCCGAGC...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR CAA 90 bp GAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCTCTCTGCGCACCAAACTaGGCAAGAGGGGAATCCTCC +
Preference number: 3 (lower is better)
Translates to: EAPGCVLAASRSPTSVPALCAPN*ARGESS
Trigger: GGAGGATTCCCCTCTTGCCAAGTTTGGTGCGCAGAG...AGCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CCA 72 bp CCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTaGCTGGCAGGACTCATGAGACATCAAACACAGAAG +
Preference number: 3 (lower is better)
Translates to: PCTRVEAQHVGE*LAGLMRHQTQK
Trigger: CTTCTGTGTTTGATGTCTCATGAGTCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CCA 72 bp CCCTTTGGTCCCATCTGTAGCTCTGCGCACCAAACTTaGCAAGAGGGGAATCCTCCTGGTGAACAGAGCCTG +
Preference number: 3 (lower is better)
Translates to: PFGPICSSAHQT*QEGNPPGEQSL
Trigger: CAGGCTCTGTTCACCAGGAGGATTCCCCTCTTGCCAAGTTTGGTGCGCAGAGCTACAGATGGGACCAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR CAA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGTTAGAGGAGTTGGCCTaGGTCCCTGAAGCCCTTGTG +
Preference number: 3 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQLEELA*VPEALV
Trigger: CACAAGGGCTTCAGGGACCAAGGCCAACTCCTCTAA...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR-3UTR CAA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATAAGGCTATTGCATATTTaGAAAAGGGGTGGAAGAGTA +
Preference number: 3 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIRLLHI*KRGGRV
Trigger: TACTCTTCCACCCCTTTTCAAAATATGCAATAGCCT...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTAGCACCCAGGGCCGGTaGTCCACTCGCAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAISTQGR*STRSRA
Trigger: GGCCCGGCTGCGAGTGGATCACCGGCCCTGGGTGCT...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTCGGGGGTGGGTGCAGTaGCCGGTGCAGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGRGWVQ*PVQLGK
Trigger: CTTCCCCAACTGCACCGGCCACTGCACCCACCCCCG...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGGCTGGGGCTGGGGTTaGAAGCTGTGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGGWGWG*KLCGSW
Trigger: CCAGCTCCCACACAGCTTCCAACCCCAGCCCCAGCC...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGAATCTGGGGGAGGTTCTaGTCTCTGGGGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ALPCTRVEAQHVGEWLAGIWGRF*SLGPGP
Trigger: TGGCCCAGGCCCCAGAGACCAGAACCTCCCCCAGAT...TCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGACTCTCGCTGGAAGCGGTATaGGATGGCATCGTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: LPCTRVEAQHVGEWLAGLSLEAV*DGIVAV
Trigger: GACGGCGACGATGCCATCTCATACCGCTTCCAGCGA...GAGTCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTAGCATCAGCTCCACATaGCCCAGCCCGTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGSISST*PSPSPK
Trigger: CTTGGGGGACGGGCTGGGTCATGTGGAGCTGATGCT...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCACTGCCCAGGCTCATGTaGAGCAGCAGGTGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLMHWRGPGLRTGTKAIALPRLM*SSRCAP
Trigger: AGGGGCGCACCTGCTGCTGCACATGAGCCTGGGCAG...TGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp GCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGACGGAGGGAAACGCAGTaGAGCTCCAGTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ALPCTRVEAQHVGEWLAGRRETQ*SSSVEG
Trigger: TCCTTCCACACTGGAGCTGCACTGCGTTTCCCTCCG...TCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGTGAGGTTGACCAGTTaGCCGTCCACCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGVRLTS*PSTLSS
Trigger: GCTGCTCAAGGTGGACGGTCAACTGGTCAACCTCAC...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCGCCAATCTTGCCGCGTaGGTTCCAGGCCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCANLAA*VPGQWH
Trigger: GTGCCACTGGCCTGGAACCCACGCGGCAAGATTGGC...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGGAATGCTGTCTGGTTaGAGTGGCAGCCCCATCGAC +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGGMLSG*SGSPID
Trigger: GTCGATGGGGCTGCCACTCCAACCAGACAGCATTCC...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGAAACCAGTCACTCGAGTaGTCCACAGCCTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: ALPCTRVEAQHVGEWLAGNQSLE*STACHA
Trigger: GGCATGACAGGCTGTGGACCACTCGAGTGACTGGTT...TCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGACTCGAGGCATTCCAGTATTaGATGGCCCCCAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPCTRVEAQHVGEWLAGLEAFQY*MAPRKG
Trigger: GCCCTTTCTGGGGGCCATCCAATACTGGAATGCCTC...GAGTCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCACACAGCGTCCTCCGTaGAAACAGGGGAACCGGGGG +
Preference number: 4 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCTQRPP*KQGNRG
Trigger: CCCCCGGTTCCCCTGTTTCCACGGAGGACGCTGTGT...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGCCTATACCCGGGCACTaGCCGGCCGGGCCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQPIPGH*PAGPRV
Trigger: TACCCGAGGCCCGGCCGGCCAGTGCCCGGGTATAGG...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGTTGACCGTCCACCTTaGGCAGCTCCATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAIVDRPP*AAPCSH
Trigger: ATGGCTGCATGGAGCTGCTCAAGGTGGACGGTCAAC...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCACATTGGCCAGAGCGCTaGCTTCCTCCCAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLMHWRGPGLRTGTKAIAHWPER*LPPRRH
Trigger: ATGCCTCCTGGGAGGAAGTCAGCGCTCTGGCCAATG...TGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGGACTGGTGCCCAACTaGTACCGAAGCTGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAIGLVPN*YRSCRV
Trigger: GACCCTACAGCTTCGGTATCAGTTGGGCACCAGTCC...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp GCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGAGGGGTGTTGTACCGCTaGATCTCTGGGTCAATGACT +
Preference number: 4 (lower is better)
Translates to: ALPCTRVEAQHVGEWLAGGVLYR*ISGSMT
Trigger: AGTCATTGACCCAGAGATTCAGCGGTACAACACCCC...TCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGTCCACAGCCTGTCATaGCGCACAACTGTCCACGCT +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAIVHSLS*RTTVHA
Trigger: AGCGTGGACAGTTGTGCGGCATGACAGGCTGTGGAC...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGAAAGGGCCGGTCCATaGTGGAACCAGTCACTCGAG +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAIERAGP*WNQSLE
Trigger: CTCGAGTGACTGGTTCCAGCATGGACCGGCCCTTTC...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCTAAGCTGTGTGGGAGCTaGAGTAGGGGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EAPGCVLAASRSPTSVPAKLCGS*SRGRGL
Trigger: CAGGCCCCTGCCCCTACTCCAGCTCCCACACAGCTT...AGCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGACTCCTCCAAGATCTaGGGGAGGTTCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGDSSKI*GRFWSL
Trigger: CAGAGACCAGAACCTCCCCCAGATCTTGGAGGAGTC...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCAGATCAGCAGTGGGTATaGAACCCTGACCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLMHWRGPGLRTGTKAIADQQWV*NPDLCP
Trigger: GGGGCAGAGGTCAGGGTTTCATACCCACTGCTGATC...TGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTCCATGGAATGCTGTCTaGTTGGAGTGGCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAIPWNAV*LEWQPH
Trigger: ATGGGGCTGCCACTCCAACCAGACAGCATTCCATGG...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTCACTGCTCACAGTGTTaGGAAGCATTGGCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAIHCSQC*EALARA
Trigger: CGCTCTGGCCAATGCTTCCCAACACTGTGAGCAGTG...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTAGTGCAGCTCCAGTGTaGAAGGAGATGGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGSAAPV*KEMVFQ
Trigger: CTGGAACACCATCTCCTTCCACACTGGAGCTGCACT...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCTTGGGTGAGTCCAGCTaGCTGTCCACCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCLGESS*LSTRRE
Trigger: CTCTCTCCTGGTGGACAGCCAGCTGGACTCACCCAA...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCAGATGGGAATCGTGGGTaGCCTTGGGCTCGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LLMHWRGPGLRTGTKAIADGNRG*PWARWC
Trigger: ACACCAACGAGCCCAAGGCCACCCACGATTCCCATC...TGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGTTCGCAGTAGCAGATaGAGTCATCCCAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGVRSSR*SHPKTG
Trigger: ACCAGTCTTGGGATGACTTCATCTGCTACTGCGAAC...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGGTCCTGAAGTAGAATaGGACATCGAGGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGGPEVE*DIEAVV
Trigger: AACCACAGCCTCGATGTCTCATTCTACTTCAGGACC...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGGGCCTGCTTCACGTTaGTTTCAGCTCGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAIGPASR*FQLGPN
Trigger: ATTTGGTCCGAGCTGAAATCAACGTGAAGCAGGCCC...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGCCGGCTCAGCATGTGTaGGAACTCCCGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQPAQHV*ELPGCR
Trigger: TCTGCAGCCCGGGAGTTCTCACACATGCTGAGCCGG...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGACTCGAAAACTCGATCCACTaGTCACAGTGTTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LPCTRVEAQHVGEWLAGLENSIH*SQCWEA
Trigger: TGCTTCCCAACACTGTGAGCAGTGGATCGAGTTTTC...GAGTCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTCTAGATACAAGGCCTTaGGTGAGTCCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAILDTRP*VSPAGC
Trigger: ACAGCCAGCTGGACTCACCCAAGGCCTTGTATCTAG...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCAGGGATCAAGTTCTGGTaGCACCTCAGAGACAAGGCG +
Preference number: 4 (lower is better)
Translates to: LLMHWRGPGLRTGTKAIAGIKFW*HLRDKA
Trigger: CGCCTTGTCTCTGAGGTGCCACCAGAACTTGATCCC...TGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGACTCAATCCACCAATATCGTaGTTGCAGTATGGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LPCTRVEAQHVGEWLAGLNPPIS*LQYGPS
Trigger: TGATGGGCCATACTGCAATCACGATATTGGTGGATT...GAGTCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCAACAATTGCAGTGCAGTaGAGGGTCCACACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLMHWRGPGLRTGTKAIATIAVQ*RVHTAL
Trigger: CAGAGCTGTGTGGACCCTGCACTGCACTGCAATTGT...TGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCAGCATCACAATTGCAGTaGAGTGCAGGGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: LLMHWRGPGLRTGTKAIAASQLQ*SAGSTQ
Trigger: CTGTGTGGACCCTGCACTGCACTGCAATTGTGATGC...TGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTTATAGCGCATCCATGTaGCGGTCTCAAAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGYSASM*RSQRIH
Trigger: GTGGATTCTTTGAGACCGGCACATGGATGCGCTATA...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTACACATAGGGACTGGTaGCCAACTGATACCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAITHRDW*PTDTEA
Trigger: AGCTTCGGTATCAGTTGGGCACCAGTCCCTATGTGT...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCATGGGTTCCAGGCCAGTaGCACGATGCGGATGTAGCG +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRAWVPGQ*HDADVA
Trigger: CGCTACATCCGCATCGTGCCACTGGCCTGGAACCCA...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGGGTGTGACCAGGTCTTaGCTGGATGGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQGVTRS*LDGTAA
Trigger: GGCAGCAGTCCCATCCAGCCAAGACCTGGTCACACC...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGCTGTCTGGTTGGAGTaGCAGCCCCATCGACTGGCT +
Preference number: 4 (lower is better)
Translates to: PADSVHRKGGSSSPLPFVAVWLE*QPHRLA
Trigger: AGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGC...AACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CGCACCAAACTTGGCAAGAGGGGAATCCTCCTGGTGAACAGAGCCTGCTTAGAAAGTGGCCGGTGCAGTTaGGGAAGGTGCCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RTKLGKRGILLVNRACLESGRCS*GRCPQR
Trigger: CCTCTGAGGGCACCTTCCCCAACTGCACCGGCCACT...TTCTAAGCAGGCTCTGTTCACCAGGAGGATTCCCCTCTTGCCAAGTTTGGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGCCAGGATGGGAATCGTaGGTGGCCTTGGGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQPGWES*VALGSL
Trigger: CAACGAGCCCAAGGCCACCCACGATTCCCATCCTGG...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp TTTGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGCAGGGCATCTGCATTATCGGAGGTTCTGGTCTCTaGGGCCTGGGCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FEKGWKSRGLARQGICIIGGSGL*GLGQRL
Trigger: CAGCCTCTGGCCCAGGCCCCAGAGACCAGAACCTCC...GATAATGCAGATGCCCTGCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CAA 72 bp GGCATTGGTTTAGGCAGTGAGGCTCGGCCACTCCCTTaGGTCCCATCTGTAGCTCTGCGCACCAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: GIGLGSEARPLP*VPSVALRTKLG
Trigger: GCCAAGTTTGGTGCGCAGAGCTACAGATGGGACCAAAGGGAGTGGCCGAGCCTCACTGCCTAAACCAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGTGGCGAGCAGGATGCTaGAGAGCCGGAGACTCATCA +
Preference number: 4 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQWRAGC*RAGDSS
Trigger: TGATGAGTCTCCGGCTCTTCAGCATCCTGCTCGCCA...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCCGTAACCATCCAGGGTaGAATTTGCATCTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCRNHPG*NLHLGH
Trigger: ATGGCCGAGATGCAAATTTCACCCTGGATGGTTACG...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCCTACCACTACCTGAGTaGCAGGCAGATGGTCTACAA +
Preference number: 4 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCLPLPE*QADGLQ
Trigger: TTGTAGACCATCTGCCTGTCACTCAGGTAGTGGTAG...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGAGGAGCCACATTGTTaGACCGGACACCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: PADSVHRKGGSSSPLPFVEEPHC*TGHQTG
Trigger: GCCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTC...AACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTTCAAAGTCATCCGAGTaGACTGTCAGGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAISKSSE*TVRFSS
Trigger: GGATGAGAACCTGACAGTGCACTCGGATGACTTTGA...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCTAGCTCCATGCAGCCATaGAATGCTGTCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: EAPGCVLAASRSPTSVPASSMQP*NAVWLE
Trigger: CTCCAACCAGACAGCATTCCATGGCTGCATGGAGCT...AGCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCACATCGAGGCTGTGGTTaGCTCGGATCGGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRAHRGCG*LGSEGN
Trigger: GTTTCCCTCCGATCCGAGCCAACCACAGCCTCGATG...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCTCTCCATTCAAACGCATaGCCCTCAAGCAGCCCACAA +
Preference number: 4 (lower is better)
Translates to: EAPGCVLAASRSPTSVPALHSNA*PSSSPQ
Trigger: TTGTGGGCTGCTTGAGGGCCATGCGTTTGAATGGAG...AGCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTCCAGCTCAGCAGTCATaGGCCGAGGGGTTCGGAAAT +
Preference number: 4 (lower is better)
Translates to: PADSVHRKGGSSSPLPFVPAQQS*AEGFGN
Trigger: ATTTCCGAACCCCTCGGCCCATGACTGCTGAGCTGG...AACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CAA 72 bp ACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTaGTTAATCCTTGCCAGCAGCTGGGACAGAGATGGC +
Preference number: 4 (lower is better)
Translates to: TGREAVHLPCPS*LILASSWDRDG
Trigger: GCCATCTCTGTCCCAGCTGCTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp TTTGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGCAGGGCATCTGCATTATCAGGCTCACCGTGGTGTaGCCAGGTCTTGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: FEKGWKSRGLARQGICIIRLTVV*PGLGWM
Trigger: CATCCAGCCAAGACCTGGTCACACCACGGTGAGCCT...GATAATGCAGATGCCCTGCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCATGCAGAGCGCAGTGCTaGCTGGAGGTTATAGCGCAT +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRACRAQC*LEVIAH
Trigger: ATGCGCTATAACCTCCAGTCAGCACTGCGCTCTGCA...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCATCCACAGTTAGATTCTaGCAGTTCTCCTTGAACCCG +
Preference number: 4 (lower is better)
Translates to: LLMHWRGPGLRTGTKAIASTVRF*QFSLNP
Trigger: CGGGTTCAAGGAGAACTGTCAGAATCTAACTGTGGA...TGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCTGCATGGTTTTCCTGTaGCACAAAGTTCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCCMVFL*HKVHLV
Trigger: CACGAGGTGAACTTTGTGGCACAGGAAAACCATGCA...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGGTCGGCATCACAATTaGAGTGCAGTGCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PADSVHRKGGSSSPLPFVGRHHN*SAVQGP
Trigger: TGGACCCTGCACTGCACTGCAATTGTGATGCCGACC...AACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCAGCGCCTCTTAAGCTCTaGAGATCCCACATAGAGGGG +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRAAPLKL*RSHIEG
Trigger: CCCCTCTATGTGGGATCTGCAGAGCTTAAGAGGCGC...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGGCCCCATCGACTGGCTaGTTTGGGACAACCACCAAA +
Preference number: 4 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQAPSTG*FGTTTK
Trigger: TTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGC...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTCGAGGGGTTCGGAAATaGGTCTTGAGAGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: PADSVHRKGGSSSPLPFVRGVRK*VLRGAT
Trigger: TGTGGCTCCTCTCAAGACCCATTTCCGAACCCCTCG...AACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CAA 72 bp CAGGCCTGCGCACAGGCACCAAGGCTATTGCATATTTaGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: QACAQAPRLLHI*KRGGRVEGWLG
Trigger: GCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAAATATGCAATAGCCTTGGTGCCTGTGCGCAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTTCACCTACCACTACCTaGGTGACAGGCAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: PADSVHRKGGSSSPLPFVSPTTT*VTGRWS
Trigger: AGACCATCTGCCTGTCACTCAGGTAGTGGTAGGTGA...AACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp TTTGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGCAGGGCATCTGCATTATCTTGGCTGGATGGGACTaGTGCCCAGGCTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: FEKGWKSRGLARQGICIILAGWD*CPGSCA
Trigger: TGCACATGAGCCTGGGCAGCAGTCCCATCCAGCCAA...GATAATGCAGATGCCCTGCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCCGAATGGCGCATCACTaGCATTTCTGCAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCRMAHH*HFCNVD
Trigger: ATCAACATTGCAGAAATGGCAGTGATGCGCCATTCG...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCAGCTTCAGGGGTCCACTaGCATCAGGATCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRAASGVH*HQDQWC
Trigger: ACACCATTGATCCTGATGGCAGTGGACCCCTGAAGC...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp GGGCTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTATACTGATGACTGCATaGTTTTCCTGTGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: GLLMHWRGPGLRTGTKAIILMTA*FSCATK
Trigger: CTTTGTGGCACAGGAAAACCATGCAGTCATCAGTAT...AATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCAGAATCTCTGGGTCAATaGCTCCTGTCTCCATCACAC +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRAESLGQ*LLSPSH
Trigger: GTGTGATGGAGACAGGAGTCATTGACCCAGAGATTC...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCGGTTCTCATCCCCATTaGCAATATCAAAGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCGSHPH*QYQRQR
Trigger: TCTTTGCCTTTGATATTGGCAATGGGGATGAGAACC...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCACCCTTTTTGGTAGAATaGTGTCCAGCTGTCCACACG +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRAPFLVE*CPAVHT
Trigger: CGTGTGGACAGCTGGACACCATTCTACCAAAAAGGG...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCAGGAAGCGGTATGAGATaGCATCGTCGCCGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRAGSGMR*HRRRQN
Trigger: ATTTTGACGGCGACGATGCCATCTCATACCGCTTCC...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCAGTAGTATGGGAAATCTaGAGGCAGGTACCAGGGATC +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRAVVWEI*RQVPGI
Trigger: GATCCCTGGTACCTGCCTCCAGATTTCCCATACTAC...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp TTTGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGCAGGGCATCTGCATTATCTGGTGTTCCAGGAATTaGGGTCACCATAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: FEKGWKSRGLARQGICIIWCSRN*GHHSSA
Trigger: TGCGCTGCTATGGTGACCGCAATTCCTGGAACACCA...GATAATGCAGATGCCCTGCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTATCGACTGGCTGGTTTaGGACAACCACCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PADSVHRKGGSSSPLPFVIDWLV*DNHQRS
Trigger: ACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGAT...AACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp TTTGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGCAGGGCATCTGCATTATCTTCATTAAGTCGATCTaGAGCCAGGGATTCGGGTCC +
Preference number: 4 (lower is better)
Translates to: FEKGWKSRGLARQGICIIFIKSI*SQGFGS
Trigger: GGACCCGAATCCCTGGCTGCAGATCGACTTAATGAA...GATAATGCAGATGCCCTGCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCAAATGCTGTTCCTCATTaGGGCCAATCCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QRWQERPVSASWAFSCRANAVPH*GQSKSC
Trigger: ACAGCTTTTGGATTGGCCGCAATGAGGAACAGCATT...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTATCGTGATTGCAGTATaGCCCATCAAAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PADSVHRKGGSSSPLPFVIVIAV*PIKSCE
Trigger: CTCACAGCTTTTGATGGGCCATACTGCAATCACGAT...AACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp TATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTTGGCTGAAGCAAGTGAAGCAGAGGGCCTCCGAAGTTaGTGGGGTGTGGAACGGGAT +
Preference number: 4 (lower is better)
Translates to: YLFYSGRLFMALAEASEAEGLRS*WGVERD
Trigger: ATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTC...TGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGCATCACTGCCATTTCTaGAATGTTGATCCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQHHCHF*NVDPVV
Trigger: TACAACCGGATCAACATTGCAGAAATGGCAGTGATG...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGATCAATACTGATGACTaGATGGTTTTCCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQINTDD*MVFLCH
Trigger: GTGGCACAGGAAAACCATGCAGTCATCAGTATTGAT...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp TATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTTGGCTGAAGCAAGTGAAGCACACCAAGGCTCACCGTaGTGTGACCAGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: YLFYSGRLFMALAEASEAHQGSP*CDQVLA
Trigger: AGCCAAGACCTGGTCACACCACGGTGAGCCTTGGTG...TGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp TTTGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGCAGGGCATCTGCATTATCCCACTAGACCCCCGATaGATATCTCATTTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: FEKGWKSRGLARQGICIIPLDPR*ISHFQD
Trigger: ATCTTGAAAATGAGATATTCATCGGGGGTCTAGTGG...GATAATGCAGATGCCCTGCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CAAGAAATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGGCCTCAGGCCAATCTTaGCGCGTGGGTTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QEIYIKNMTSWVNAAAFLASGQS*RVGSRP
Trigger: TGGCCTGGAACCCACGCGGCAAGATTGGCCTGAGGC...CAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATATTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp TATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTTGGCTGAAGCAAGTGAAGCAACTCGCAGCCGGGCCTaGTTCACGTTGATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: YLFYSGRLFMALAEASEATRSRA*FTLISA
Trigger: AGCTGAAATCAACGTGAAGCAGGCCCGGCTGCGAGT...TGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp ATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGAGCAGAAGGGCCGGTCCATGCTaGAACCAGTCACTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: IYIKNMTSWVNAAAFLSRRAGPC*NQSLEW
Trigger: CCACTCGAGTGACTGGTTCCAGCATGGACCGGCCCT...TCTGCTCAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp TATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTTGGCTGAAGCAAGTGAAGCACATTCCAGTATTGGATaGCCCCCAGAAAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: YLFYSGRLFMALAEASEAHSSIG*PPERAG
Trigger: ACCGGCCCTTTCTGGGGGCCATCCAATACTGGAATG...TGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp TATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTTGGCTGAAGCAAGTGAAGCAACTTGGACGAAGTTGTaGGGGCCTCCGAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: YLFYSGRLFMALAEASEATWTKL*GPPKLM
Trigger: CATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGT...TGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATAAGCCTCCTGCAGTGTTaGGCAGCCGGGAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQISLLQC*AAGNCS
Trigger: GCTACAATTCCCGGCTGCTCAACACTGCAGGAGGCT...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATAATGTGCAGCAGCAGGTaGGCCCCTTGCAGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIMCSSR*APCSSS
Trigger: GCTTGAACTGCAAGGGGCGCACCTGCTGCTGCACAT...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CAAGAAATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGGGCAGCCCCATCGACTaGCTGGTTTGGGACAACCAC +
Preference number: 4 (lower is better)
Translates to: QEIYIKNMTSWVNAAAFLGSPID*LVWDNH
Trigger: GTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCC...CAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATATTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATAGTGGGTATGAAACCCTaGCCTCTGCCCCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIVGMKP*PLPLPH
Trigger: ATGTGGAAGGGGCAGAGGTCAGGGTTTCATACCCAC...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATACACGTACAAAGGAGCTaGCATAGAGCAGGACGGCAG +
Preference number: 4 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIHVQRS*HRAGRQ
Trigger: CTGCCGTCCTGCTCTATGTCAGCTCCTTTGTACGTG...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp ATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGAGCAGACAAACTGAAGCTTCTTaGGGCCAGTCTGCGCGATGG +
Preference number: 4 (lower is better)
Translates to: IYIKNMTSWVNAAAFLSRQTEAS*GQSARW
Trigger: CCATCGCGCAGACTGGCCGCAAGAAGCTTCAGTTTG...TCTGCTCAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CAAGAAATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGTGCCCTCAGAGGCATTaGCACGGCCCTCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: QEIYIKNMTSWVNAAAFLCPQRH*HGPPSS
Trigger: TGAACTTGGAGGGCCGTGCCAATGCCTCTGAGGGCA...CAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATATTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATACAGTCACTGGCCGGGTaGTTAGCTGGTACACATAGG +
Preference number: 4 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIQSLAG*LAGTHR
Trigger: CCTATGTGTACCAGCTAACCACCCGGCCAGTGACTG...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATACCAGGGATCAAGTTCTaGTGGCACCTCAGAGACAAG +
Preference number: 4 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIPGIKF*WHLRDK
Trigger: CTTGTCTCTGAGGTGCCACCAGAACTTGATCCCTGG...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp TATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTTGGCTGAAGCAAGTGAAGCACTGAGCTTCAGAATTTaGGCGGTTTGTATCACCTAC +
Preference number: 4 (lower is better)
Translates to: YLFYSGRLFMALAEASEALSFRI*AVCITY
Trigger: GTAGGTGATACAAACCGCTCAAATTCTGAAGCTCAG...TGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR TCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATAGCCCATCAAAAGCTGTaGGGTCACAGTCACATGTGT +
Preference number: 4 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIAHQKL*GHSHMC
Trigger: ACACATGTGACTGTGACCTCACAGCTTTTGATGGGC...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp TATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTTGGCTGAAGCAAGTGAAGCAAGATCACGTTTTCTATaGAGCCACGGAAGTTATGGC +
Preference number: 4 (lower is better)
Translates to: YLFYSGRLFMALAEASEARSRFL*SHGSYG
Trigger: GCCATAACTTCCGTGGCTGCATAGAAAACGTGATCT...TGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp CAAGAAATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGCATGCAGCCATGGAATaGTGTCTGGTTGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QEIYIKNMTSWVNAAAFLHAAME*CLVGVA
Trigger: TGCCACTCCAACCAGACAGCATTCCATGGCTGCATG...CAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATATTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp ATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGAGCAGAGTACCGCTGAATCTCTaGGTCAATGACTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: IYIKNMTSWVNAAAFLSRVPLNL*VNDSCL
Trigger: GAGACAGGAGTCATTGACCCAGAGATTCAGCGGTAC...TCTGCTCAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
3UTR CAA 72 bp CATTATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTaGGCTGAAGCAAGTGAAGCAGTGGAGGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: HYLFYSGRLFMA*AEASEAVEVLK
Trigger: CTTTAGTACCTCCACTGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATAACAGCCCGGATCCGATaGTTCTTCATTAAGTCGATC +
Preference number: 4 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQITARIR*FFIKSI
Trigger: GATCGACTTAATGAAGAAGCATCGGATCCGGGCTGT...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp TATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTTGGCTGAAGCAAGTGAAGCACACCAATATCGTGATTaGAGTATGGCCCATCAAAAG +
Preference number: 4 (lower is better)
Translates to: YLFYSGRLFMALAEASEAHQYRD*SMAHQK
Trigger: CTTTTGATGGGCCATACTGCAATCACGATATTGGTG...TGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp CAAGAAATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGCAGTGTGGAAGGAGATaGTGTTCCAGGAATTGCGGT +
Preference number: 4 (lower is better)
Translates to: QEIYIKNMTSWVNAAAFLQCGRR*CSRNCG
Trigger: ACCGCAATTCCTGGAACACCATCTCCTTCCACACTG...CAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATATTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CCA 90 bp ATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGAGCAGAGTCGTCATGGTAGTATaGGAAATCTGGAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: IYIKNMTSWVNAAAFLSRVVMVV*EIWRQV
Trigger: TACCTGCCTCCAGATTTCCCATACTACCATGACGAC...TCTGCTCAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR GCA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATAATCCAGGGTGAAATTTaGATCTCGGCCATATCGATC +
Preference number: 4 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIIQGEI*ISAISI
Trigger: GATCGATATGGCCGAGATGCAAATTTCACCCTGGAT...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp CGTGGAAACAGGGGAACCGGGGGTGGGTGCAGTGGCCGGTGCAGTTaGGGAAGGTGCCCTCAGAGGCATTGGCACGGCCCTCCAAGTTCA +
Preference number: 5 (lower is better)
Translates to: RGNRGTGGGCSGRCS*GRCPQRHWHGPPSS
Trigger: TGAACTTGGAGGGCCGTGCCAATGCCTCTGAGGGCACCTTCCCCAACTGCACCGGCCACTGCACCCACCCCCGGTTCCCCTGTTTCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp AGAGGGGTTGGTCATACACCAGCCAGATGTAGGTCTGCAGGGGCATaGGCCTTAGCACCCAGGGCCGGTGATCCACTCGCAGCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: RGVGHTPARCRSAGA*ALAPRAGDPLAAGP
Trigger: AGGCCCGGCTGCGAGTGGATCACCGGCCCTGGGTGCTAAGGCCCATGCCCCTGCAGACCTACATCTGGCTGGTGTATGACCAACCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp CCCAGGGCCGTGGTATCCAGGCACGTAACCAGGAGTGTCGTAGCCTaGAACATAGCCAGGCTCATAGCCCGGCACTGGCCGGCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: PRAVVSRHVTRSVVA*NIARLIARHWPAQH
Trigger: ATGCTGAGCCGGCCAGTGCCGGGCTATGAGCCTGGCTATGTTCCAGGCTACGACACTCCTGGTTACGTGCCTGGATACCACGGCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp TGGCCCCCAGAAAGGGCCGGTCCATGCTGGAACCAGTCACTCGAGTaGTCCACAGCCTGTCATGCCGCACAACTGTCCACGCTCGGTTCT +
Preference number: 5 (lower is better)
Translates to: WPPERAGPCWNQSLE*STACHAAQLSTLGS
Trigger: AGAACCGAGCGTGGACAGTTGTGCGGCATGACAGGCTGTGGACCACTCGAGTGACTGGTTCCAGCATGGACCGGCCCTTTCTGGGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp GCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGAAGAGGAGCCACATTGTaGAACCGGACACCAGACAGG +
Preference number: 5 (lower is better)
Translates to: ALPCTRVEAQHVGEWLAGRGATL*NRTPDR
Trigger: CCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTCT...TCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp GATGCCCAGCCTCAGGCCAATCTTGCCGCGTGGGTTCCAGGCCAGTaGCACGATGCGGATGTAGCGAGCCGTAAAGTGGTAGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: DAQPQANLAAWVPGQ*HDADVASRKVVVKV
Trigger: GACCTTCACTACCACTTTACGGCTCGCTACATCCGCATCGTGCCACTGGCCTGGAACCCACGCGGCAAGATTGGCCTGAGGCTGGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp GGGTGCAGTGGCCGGTGCAGTTGGGGAAGGTGCCCTCAGAGGCATTaGCACGGCCCTCCAAGTTCAGAGTCACTCCATTCAAACGCATGG +
Preference number: 5 (lower is better)
Translates to: GCSGRCSWGRCPQRH*HGPPSSESLHSNAW
Trigger: CCATGCGTTTGAATGGAGTGACTCTGAACTTGGAGGGCCGTGCCAATGCCTCTGAGGGCACCTTCCCCAACTGCACCGGCCACTGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp CTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTGAGTGGCTGGCAGGACTCTCCCACATAGAGGGGTaGGTCATACACCAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: LPCTRVEAQHVGEWLAGLSHIEG*VIHQPD
Trigger: ATCTGGCTGGTGTATGACCAACCCCTCTATGTGGGA...GAGTCCTGCCAGCCACTCACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp TGTGTGGCCACAGCCCGGATCCGATGCTTCTTCATTAAGTCGATCTaGAGCCAGGGATTCGGGTCCCCAATCCGGGGCGACCATCCACTG +
Preference number: 5 (lower is better)
Translates to: CVATARIRCFFIKSI*SQGFGSPIRGDHPL
Trigger: CAGTGGATGGTCGCCCCGGATTGGGGACCCGAATCCCTGGCTGCAGATCGACTTAATGAAGAAGCATCGGATCCGGGCTGTGGCCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp TGGATGTGTAGGGACAACCATAGATGCCCAGCCTCAGGCCAATCTTaGCGCGTGGGTTCCAGGCCAGTGGCACGATGCGGATGTAGCGAG +
Preference number: 5 (lower is better)
Translates to: WMCRDNHRCPASGQS*RVGSRPVARCGCSE
Trigger: CTCGCTACATCCGCATCGTGCCACTGGCCTGGAACCCACGCGGCAAGATTGGCCTGAGGCTGGGCATCTATGGTTGTCCCTACACATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp GACCAGTTGACCGTCCACCTTGAGCAGCTCCATGCAGCCATGGAATaGTGTCTGGTTGGAGTGGCAGCCCCATCGACTGGCTGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: DQLTVHLEQLHAAME*CLVGVAAPSTGWFG
Trigger: CCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCATGGAGCTGCTCAAGGTGGACGGTCAACTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp AGGAGGCATTCCAGTATTGGATGGCCCCCAGAAAGGGCCGGTCCATaGTGGAACCAGTCACTCGAGTGGTCCACAGCCTGTCATGCCGCA +
Preference number: 5 (lower is better)
Translates to: RRHSSIGWPPERAGP*WNQSLEWSTACHAA
Trigger: TGCGGCATGACAGGCTGTGGACCACTCGAGTGACTGGTTCCAGCATGGACCGGCCCTTTCTGGGGGCCATCCAATACTGGAATGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp GTAGGGACAACCATAGATGCCCAGCCTCAGGCCAATCTTGCCGCGTaGGTTCCAGGCCAGTGGCACGATGCGGATGTAGCGAGCCGTAAA +
Preference number: 5 (lower is better)
Translates to: VGTTIDAQPQANLAA*VPGQWHDADVASRK
Trigger: TTTACGGCTCGCTACATCCGCATCGTGCCACTGGCCTGGAACCCACGCGGCAAGATTGGCCTGAGGCTGGGCATCTATGGTTGTCCCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp ATGGCCTCCGCCAGCTCAGCAGTCATGGGCCGAGGGGTTCGGAAATaGGTCTTGAGAGGAGCCACATTGTTGAACCGGACACCAGACAGG +
Preference number: 5 (lower is better)
Translates to: MASASSAVMGRGVRK*VLRGATLLNRTPDR
Trigger: CCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCCTCGGCCCATGACTGCTGAGCTGGCGGAGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp CAGAGATGGCAGGAAAGGCCTGTCTCAGCATCATGGGCTTTCTCCTGTAGGGCAAGCCTCAGGCCAATCTaGCCGCGTGGGTTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: QRWQERPVSASWAFSCRASLRPI*PRGFQA
Trigger: GGCCTGGAACCCACGCGGCAAGATTGGCCTGAGGCT...TGCCCTACAGGAGAAAGCCCATGATGCTGAGACAGGCCTTTCCTGCCATCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp CTCCTCATGCATTGGAGAGGGCCAGGCCTGCGCACAGGCACCAAGGCTATTGCATGGTCGGCATCACAATaGCAGTGCAGTGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: LLMHWRGPGLRTGTKAIAWSASQ*QCSAGS
Trigger: GGACCCTGCACTGCACTGCAATTGTGATGCCGACCA...TGCAATAGCCTTGGTGCCTGTGCGCAGGCCTGGCCCTCTCCAATGCATGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 90 bp GCTAAGCGTCCTCGGCGTGGAAAGCCAGGCACTTGGACGAAGTTGTaGGGGCCTCCGAAGTTGATGGGGTGTGGAACGGGATCCAAGCAA +
Preference number: 5 (lower is better)
Translates to: AKRPRRGKPGTWTKL*GPPKLMGCGTGSKQ
Trigger: TTGCTTGGATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGTGCCTGGCTTTCCACGCCGAGGACGCTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 90 bp ACAAGGCGTGGCATAGCTCCACAGTTAGATTCTGACAGTTCTCCTTaGACCCGCATGGCCTCCGCCAGCTCAGCAGTCATGGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: TRRGIAPQLDSDSSP*TRMASASSAVMGRG
Trigger: CCCTCGGCCCATGACTGCTGAGCTGGCGGAGGCCATGCGGGTTCAAGGAGAACTGTCAGAATCTAACTGTGGAGCTATGCCACGCCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp AGGCATTCCAGTATTGGATGGCCCCCAGAAAGGGCCGGTCCATGCTaGAACCAGTCACTCGAGTGGTCCACAGCCTGTCATGCCGCACAA +
Preference number: 5 (lower is better)
Translates to: RHSSIGWPPERAGPC*NQSLEWSTACHAAQ
Trigger: TTGTGCGGCATGACAGGCTGTGGACCACTCGAGTGACTGGTTCCAGCATGGACCGGCCCTTTCTGGGGGCCATCCAATACTGGAATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTCGCATTGTGCCCTTTTaGGTAGAATGGTGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGRIVPF*VEWCPA
Trigger: AGCTGGACACCATTCTACCAAAAAGGGCACAATGCG...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp GAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCTCAGCAGGTGCGCCCCTaGCAGTTCAAGCGTCACATA +
Preference number: 5 (lower is better)
Translates to: EAPGCVLAASRSPTSVPAQQVRP*QFKRHI
Trigger: TATGTGACGCTTGAACTGCAAGGGGCGCACCTGCTG...AGCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 90 bp GCGATGGATACATTCACTTGCCCTTCGCTAAGCATCAGCTCCACATaGCCCAGCCCGTCCCCCAAGTGGGAGAAAAGGAGCAGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: AMDTFTCPSLSISST*PSPSPKWEKRSSPV
Trigger: CACAGGGCTGCTCCTTTTCTCCCACTTGGGGGACGGGCTGGGTCATGTGGAGCTGATGCTTAGCGAAGGGCAAGTGAATGTATCCATCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp CGCCGTCAAAATACAGGATGCTGGATGTGTAGGGACAACCATAGATaGCCAGCCTCAGGCCAATCTTGCCGCGTGGGTTCCAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: RRQNTGCWMCRDNHR*PASGQSCRVGSRPV
Trigger: CACTGGCCTGGAACCCACGCGGCAAGATTGGCCTGAGGCTGGGCATCTATGGTTGTCCCTACACATCCAGCATCCTGTATTTTGACGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp CGGTCCATGCTGGAACCAGTCACTCGAGTGGTCCACAGCCTGTCATaGCGCACAACTGTCCACGCTCGGTTCTCTCGGATGTCACAATAC +
Preference number: 5 (lower is better)
Translates to: RSMLEPVTRVVHSLS*RTTVHARFSRMSQY
Trigger: GTATTGTGACATCCGAGAGAACCGAGCGTGGACAGTTGTGCGGCATGACAGGCTGTGGACCACTCGAGTGACTGGTTCCAGCATGGACCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCCATCGACTGGCTGGTTaGGGACAACCACCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCHRLAG*GQPPKK
Trigger: CTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATG...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp TTGAGGGCACAGCAGGCTCTGCCCTGCACTAGAGTGGAGGCCCAGCACGTGGGTAAATGCTGTTCCTCATaGCGGCCAATCCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LRAQQALPCTRVEAQHVGKCCSS*RPIQKL
Trigger: CAGCTTTTGGATTGGCCGCAATGAGGAACAGCATTT...ACCCACGTGCTGGGCCTCCACTCTAGTGCAGGGCAGAGCCTGCTGTGCCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 90 bp TGGCACCTCAGAGACAAGGCGTGGCATAGCTCCACAGTTAGATTCTaGCAGTTCTCCTTGAACCCGCATGGCCTCCGCCAGCTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: WHLRDKAWHSSTVRF*QFSLNPHGLRQLSS
Trigger: ACTGCTGAGCTGGCGGAGGCCATGCGGGTTCAAGGAGAACTGTCAGAATCTAACTGTGGAGCTATGCCACGCCTTGTCTCTGAGGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp GGCTGTGGTAAAGAGTCCATAGTAGGAAGAAGCGCCCAGAGACCGTaGATACAGAGGCCCCACCAGCTCCTCATTGCAACCGTAGTAGCC +
Preference number: 5 (lower is better)
Translates to: GCGKESIVGRSAQRP*IQRPHQLLIATVVA
Trigger: GGCTACTACGGTTGCAATGAGGAGCTGGTGGGGCCTCTGTATGCACGGTCTCTGGGCGCTTCTTCCTACTATGGACTCTTTACCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp CGTCCCAAAGACTTTGGCTGGCGCCTCGCTGGAAGCGGTATGAGATaGCATCGTCGCCGTCAAAATACAGGATGCTGGATGTGTAGGGAC +
Preference number: 5 (lower is better)
Translates to: RPKDFGWRLAGSGMR*HRRRQNTGCWMCRD
Trigger: GTCCCTACACATCCAGCATCCTGTATTTTGACGGCGACGATGCCATCTCATACCGCTTCCAGCGAGGCGCCAGCCAAAGTCTTTGGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp ACCTTGAGCAGCTCCATGCAGCCATGGAATGCTGTCTGGTTGGAGTaGCAGCCCCATCGACTGGCTGGTTTGGGACAACCACCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: TLSSSMQPWNAVWLE*QPHRLAGLGQPPKK
Trigger: CTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCATGGAGCTGCTCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp GTCTCCATCACACGCCCTAGATACAAGGCCTTGGGTGAGTCCAGCTaGCTGTCCACCAGGAGAGAGAACTTCTGTTCTGTCAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: VSITRPRYKALGESS*LSTRRENFCSVSGK
Trigger: CTTCCCGCTGACAGAACAGAAGTTCTCTCTCCTGGTGGACAGCCAGCTGGACTCACCCAAGGCCTTGTATCTAGGGCGTGTGATGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 90 bp GTGGAAAGCCAGGCACTTGGACGAAGTTGTGAGGGCCTCCGAAGTTaGTGGGGTGTGGAACGGGATCCAAGCAACGGAAAGCCACATTAC +
Preference number: 5 (lower is better)
Translates to: VESQALGRSCEGLRS*WGVERDPSNGKPHY
Trigger: GTAATGTGGCTTTCCGTTGCTTGGATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGTGCCTGGCTTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp GGAATGCTGTCTGGTTGGAGTGGCAGCCCCATCGACTGGCTGGTTTaGGACAACCACCAAAGAAGTATGAAGTCCCTGTGCGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: GMLSGWSGSPIDWLV*DNHQRSMKSLCGSA
Trigger: TGCTGATCCGCACAGGGACTTCATACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp TGCAGCCATGGAATGCTGTCTGGTTGGAGTGGCAGCCCCATCGACTaGCTGGTTTGGGACAACCACCAAAGAAGTATGAAGTCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: CSHGMLSGWSGSPID*LVWDNHQRSMKSLC
Trigger: GCACAGGGACTTCATACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp CCTGCTGATAGTGTACACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTAGTGAGGTTGACCAGTaGACCGTCCACCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: PADSVHRKGGSSSPLPFVSEVDQ*TVHLEQ
Trigger: CTGCTCAAGGTGGACGGTCAACTGGTCAACCTCACT...AACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGTACACTATCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 90 bp GAACACGTCCCAAAGACTTTGGCTGGCGCCTCGCTGGAAGCGGTATaGGATGGCATCGTCGCCGTCAAAATACAGGATGCTGGATGTGTA +
Preference number: 5 (lower is better)
Translates to: EHVPKTLAGASLEAV*DGIVAVKIQDAGCV
Trigger: TACACATCCAGCATCCTGTATTTTGACGGCGACGATGCCATCTCATACCGCTTCCAGCGAGGCGCCAGCCAAAGTCTTTGGGACGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp TTCTCCTCTGTCTTGAAACTAAAAGCGAACACGTCCCAAAGACTTTaGCTGGCGCCTCGCTGGAAGCGGTATGAGATGGCATCGTCGCCG +
Preference number: 5 (lower is better)
Translates to: FSSVLKLKANTSQRL*LAPRWKRYEMASSP
Trigger: CGGCGACGATGCCATCTCATACCGCTTCCAGCGAGGCGCCAGCCAAAGTCTTTGGGACGTGTTCGCTTTTAGTTTCAAGACAGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp AGGCACTTGGACGAAGTTGTGAGGGCCTCCGAAGTTGATGGGGTGTaGAACGGGATCCAAGCAACGGAAAGCCACATTACCCTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: RHLDEVVRASEVDGV*NGIQATESHITLKG
Trigger: ACCTTTGAGGGTAATGTGGCTTTCCGTTGCTTGGATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp GAGCTTTGCCGCCAGGATGGGAATCGTGGGTGGCCTTGGGCTCGTTaGTGTGGTAGGAGCCCTTGTATCGATGATTTTGCAGATAGAACA +
Preference number: 5 (lower is better)
Translates to: ELCRQDGNRGWPWAR*CGRSPCIDDFADRT
Trigger: TGTTCTATCTGCAAAATCATCGATACAAGGGCTCCTACCACACCAACGAGCCCAAGGCCACCCACGATTCCCATCCTGGCGGCAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp TTTGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGCAGGGCATCTGCATTATCGGAGGCATTCCAGTATaGGATGGCCCCCAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: FEKGWKSRGLARQGICIIGGIPV*DGPQKG
Trigger: CCCTTTCTGGGGGCCATCCAATACTGGAATGCCTCC...GATAATGCAGATGCCCTGCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp CGCACCAAACTTGGCAAGAGGGGAATCCTCCTGGTGAACAGAGCCTGCTTAGAACGGGCCTGCTTCACGTaGATTTCAGCTCGGACCAAA +
Preference number: 5 (lower is better)
Translates to: RTKLGKRGILLVNRACLERACFT*ISARTK
Trigger: TTTGGTCCGAGCTGAAATCAACGTGAAGCAGGCCCG...TTCTAAGCAGGCTCTGTTCACCAGGAGGATTCCCCTCTTGCCAAGTTTGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp GATGTAGCGAGCCGTAAAGTGGTAGTGAAGGTCATGGCGGACCACTaGCGAGTCATTGACATTCCCGAAGAAGGTCGCATTGTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: DVASRKVVVKVMADH*RVIDIPEEGRIVPF
Trigger: AAAGGGCACAATGCGACCTTCTTCGGGAATGTCAATGACTCGGCAGTGGTCCGCCATGACCTTCACTACCACTTTACGGCTCGCTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp GGAGGCTCCAGGGTGTGTTTTAGCAGCCTCTCGATCCCCCACATCTGTCCCTGCACTGAGCTTCAGAATTaGAGCGGTTTGTATCACCTA +
Preference number: 5 (lower is better)
Translates to: GGSRVCFSSLSIPHICPCTELQN*SGLYHL
Trigger: TAGGTGATACAAACCGCTCAAATTCTGAAGCTCAGT...GCAGGGACAGATGTGGGGGATCGAGAGGCTGCTAAAACACACCCTGGAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp ACTCGCAGCCGGGCCTGCTTCACGTTGATTTCAGCTCGGACCAAATaGCACTCATCATCGTTAAACTCAAAGTCATCCGAGTGCACTGTC +
Preference number: 5 (lower is better)
Translates to: TRSRACFTLISARTK*HSSSLNSKSSECTV
Trigger: GACAGTGCACTCGGATGACTTTGAGTTTAACGATGATGAGTGGCATTTGGTCCGAGCTGAAATCAACGTGAAGCAGGCCCGGCTGCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp ATTGACATTCCCGAAGAAGGTCGCATTGTGCCCTTTTTGGTAGAATaGTGTCCAGCTGTCCACACGGTCCCCGTAGAGCAGCATGTAACG +
Preference number: 5 (lower is better)
Translates to: IDIPEEGRIVPFLVE*CPAVHTVPVEQHVT
Trigger: CGTTACATGCTGCTCTACGGGGACCGTGTGGACAGCTGGACACCATTCTACCAAAAAGGGCACAATGCGACCTTCTTCGGGAATGTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp AAACTAAAAGCGAACACGTCCCAAAGACTTTGGCTGGCGCCTCGCTaGAAGCGGTATGAGATGGCATCGTCGCCGTCAAAATACAGGATG +
Preference number: 5 (lower is better)
Translates to: KLKANTSQRLWLAPR*KRYEMASSPSKYRM
Trigger: CATCCTGTATTTTGACGGCGACGATGCCATCTCATACCGCTTCCAGCGAGGCGCCAGCCAAAGTCTTTGGGACGTGTTCGCTTTTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp GTAGTATGGGAAATCTGGAGGCAGGTACCAGGGATCAAGTTCTGGTaGCACCTCAGAGACAAGGCGTGGCATAGCTCCACAGTTAGATTC +
Preference number: 5 (lower is better)
Translates to: VVWEIWRQVPGIKFW*HLRDKAWHSSTVRF
Trigger: GAATCTAACTGTGGAGCTATGCCACGCCTTGTCTCTGAGGTGCCACCAGAACTTGATCCCTGGTACCTGCCTCCAGATTTCCCATACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 90 bp ACCATAGCAGCGCAGAGGCCTCAGGAAGAACTGAGCTTCAGAATTTaGGCGGTTTGTATCACCTACCACTACCTGAGTGACAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: TIAAQRPQEELSFRI*AVCITYHYLSDRQM
Trigger: CATCTGCCTGTCACTCAGGTAGTGGTAGGTGATACAAACCGCTCAAATTCTGAAGCTCAGTTCTTCCTGAGGCCTCTGCGCTGCTATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 90 bp ACCCTGACCTCTGCCCCTTCCACATCATCAATACTGATGACTGCATaGTTTTCCTGTGCCACAAAGTTCACCTCGTGCCAGAAGCCATCA +
Preference number: 5 (lower is better)
Translates to: TLTSAPSTSSILMTA*FSCATKFTSCQKPS
Trigger: TGATGGCTTCTGGCACGAGGTGAACTTTGTGGCACAGGAAAACCATGCAGTCATCAGTATTGATGATGTGGAAGGGGCAGAGGTCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp CACAGGAAGGGAGGCAGTTCATCTCCCCTGCCCTTCGTTGTTAATCCTTGCCAGAGGTTCTCATCCCCATaGCCAATATCAAAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: HRKGGSSSPLPFVVNPCQRFSSP*PISKAK
Trigger: CTTTGCCTTTGATATTGGCAATGGGGATGAGAACCT...CTGGCAAGGATTAACAACGAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp TGCCCCTTCCACATCATCAATACTGATGACTGCATGGTTTTCCTGTaGCACAAAGTTCACCTCGTGCCAGAAGCCATCATTCAGGCGGTA +
Preference number: 5 (lower is better)
Translates to: CPFHIINTDDCMVFL*HKVHLVPEAIIQAV
Trigger: TACCGCCTGAATGATGGCTTCTGGCACGAGGTGAACTTTGTGGCACAGGAAAACCATGCAGTCATCAGTATTGATGATGTGGAAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp ATTACCCTCAAAGGTGATCCGCGAATGGCGCATCACTGCCATTTCTaGAATGTTGATCCGGTTGTAGATCACGTTTTCTATGCAGCCACG +
Preference number: 5 (lower is better)
Translates to: ITLKGDPRMAHHCHF*NVDPVVDHVFYAAT
Trigger: CGTGGCTGCATAGAAAACGTGATCTACAACCGGATCAACATTGCAGAAATGGCAGTGATGCGCCATTCGCGGATCACCTTTGAGGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp TTTGAAAAGGGGTGGAAGAGTAGAGGGCTGGCTAGGCAGGGCATCTGCATTATCTCCTTCTCCTCTGTCTaGAAACTAAAAGCGAACACG +
Preference number: 5 (lower is better)
Translates to: FEKGWKSRGLARQGICIISFSSV*KLKANT
Trigger: CGTGTTCGCTTTTAGTTTCAAGACAGAGGAGAAGGA...GATAATGCAGATGCCCTGCCTAGCCAGCCCTCTACTCTTCCACCCCTTTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp TATCTTTTCTACTCAGGCAGGCTTTTTATGGCTTTGGCTGAAGCAAGTGAAGCAAAGGTCAGGAGCCCCTaGTCTGTTCTCCACTGTGGC +
Preference number: 5 (lower is better)
Translates to: YLFYSGRLFMALAEASEAKVRSP*SVLHCG
Trigger: GCCACAGTGGAGAACAGACAAGGGGCTCCTGACCTT...TGCTTCACTTGCTTCAGCCAAAGCCATAAAAAGCCTGCCTGAGTAGAAAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 90 bp AGAATCCACCAATATCGTGATTGCAGTATGGCCCATCAAAAGCTGTaGGGTCACAGTCACATGTGTAGTAGCTGTATCGCTCCACACAGC +
Preference number: 5 (lower is better)
Translates to: RIHQYRDCSMAHQKL*GHSHMCSSCIAPHS
Trigger: GCTGTGTGGAGCGATACAGCTACTACACATGTGACTGTGACCTCACAGCTTTTGATGGGCCATACTGCAATCACGATATTGGTGGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp GAAAGCCACATTACCCTCAAAGGTGATCCGCGAATGGCGCATCACTaGCATTTCTGCAATGTTGATCCGGTTGTAGATCACGTTTTCTAT +
Preference number: 5 (lower is better)
Translates to: ESHITLKGDPRMAHH*HFCNVDPVVDHVFY
Trigger: ATAGAAAACGTGATCTACAACCGGATCAACATTGCAGAAATGGCAGTGATGCGCCATTCGCGGATCACCTTTGAGGGTAATGTGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 90 bp CGGACCAAATGCCACTCATCATCGTTAAACTCAAAGTCATCCGAGTaGACTGTCAGGTTCTCATCCCCATTGCCAATATCAAAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: RTKCHSSSLNSKSSE*TVRFSSPLPISKAK
Trigger: CTTTGCCTTTGATATTGGCAATGGGGATGAGAACCTGACAGTGCACTCGGATGACTTTGAGTTTAACGATGATGAGTGGCATTTGGTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp AAACTGGGCATAGCACAGGACAGCCCACTGAGTTCTTTTATATATAAACAGATATGGAAAGCCAGGCACTaGGACGAAGTTGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: KLGIAQDSPLSSFIYKQIWKARH*DEVVRA
Trigger: GGCCCTCACAACTTCGTCCAAGTGCCTGGCTTTCCA...TATCTGTTTATATATAAAAGAACTCAGTGGGCTGTCCTGTGCTATGCCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS-3UTR CAA 90 bp ATATATATAAAGAATATGACCTCCTGGGTAAACGCAGCAGCATTTCTGAGCAGAACGGCAGGAGCAGAGTaGGTGCTGAAGCTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: IYIKNMTSWVNAAAFLSRTAGAE*VLKLKE
Trigger: CTCCTTCAGCTTCAGCACCAACTCTGCTCCTGCCGT...TCTGCTCAGAAATGCTGCTGCGTTTACCCAGGAGGTCATATTCTTTATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp AGGGGAACCGGGGGTGGGTGCAGTGGCCGGTGCAGTTaGGGAAGGTGCCCTCAGAGGCATTGGCACGGCCCT +
Preference number: 6 (lower is better)
Translates to: RGTGGGCSGRCS*GRCPQRHWHGP
Trigger: AGGGCCGTGCCAATGCCTCTGAGGGCACCTTCCCCAACTGCACCGGCCACTGCACCCACCCCCGGTTCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GGGCCTGAGGGAGGGAGGGGAGCTTTGCCGCCAGGATaGGAATCGTGGGTGGCCTTGGGCTCGTTGGTGTGG +
Preference number: 6 (lower is better)
Translates to: GPEGGRGALPPG*ESWVALGSLVW
Trigger: CCACACCAACGAGCCCAAGGCCACCCACGATTCCCATCCTGGCGGCAAAGCTCCCCTCCCTCCCTCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp GTCTGCAGGGGCATGGGCCTTAGCACCCAGGGCCGGTaGTCCACTCGCAGCCGGGCCTGCTTCACGTTGATT +
Preference number: 6 (lower is better)
Translates to: VCRGMGLSTQGR*STRSRACFTLI
Trigger: AATCAACGTGAAGCAGGCCCGGCTGCGAGTGGATCACCGGCCCTGGGTGCTAAGGCCCATGCCCCTGCAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp GCTGCCCAGGCTCATGTGCAGCAGCAGGTGCGCCCCTaGCAGTTCAAGCGTCACATAATCCCCCTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: AAQAHVQQQVRP*QFKRHIIPLGA
Trigger: GGCTCCCAGGGGGATTATGTGACGCTTGAACTGCAAGGGGCGCACCTGCTGCTGCACATGAGCCTGGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp GATGGGACTGCTGCCCAGGCTCATGTGCAGCAGCAGGTGCGCCCCTaGCAGTTCAAGCGTCACATAATCCCCCTGGGAGCCCTCGGTGTG +
Preference number: 6 (lower is better)
Translates to: DGTAAQAHVQQQVRP*QFKRHIIPLGALGV
Trigger: CACACCGAGGGCTCCCAGGGGGATTATGTGACGCTTGAACTGCAAGGGGCGCACCTGCTGCTGCACATGAGCCTGGGCAGCAGTCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp AGGGACAACCATAGATGCCCAGCCTCAGGCCAATCTTaGCGCGTGGGTTCCAGGCCAGTGGCACGATGCGGA +
Preference number: 6 (lower is better)
Translates to: RDNHRCPASGQS*RVGSRPVARCG
Trigger: TCCGCATCGTGCCACTGGCCTGGAACCCACGCGGCAAGATTGGCCTGAGGCTGGGCATCTATGGTTGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp ACCATAGATGCCCAGCCTCAGGCCAATCTTGCCGCGTaGGTTCCAGGCCAGTGGCACGATGCGGATGTAGCG +
Preference number: 6 (lower is better)
Translates to: TIDAQPQANLAA*VPGQWHDADVA
Trigger: CGCTACATCCGCATCGTGCCACTGGCCTGGAACCCACGCGGCAAGATTGGCCTGAGGCTGGGCATCTATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp AACGCCACCAAGGCTCACCGTGGTGTGACCAGGTCTTaGCTGGATGGGACTGCTGCCCAGGCTCATGTGCAG +
Preference number: 6 (lower is better)
Translates to: NATKAHRGVTRS*LDGTAAQAHVQ
Trigger: CTGCACATGAGCCTGGGCAGCAGTCCCATCCAGCCAAGACCTGGTCACACCACGGTGAGCCTTGGTGGCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GGTCATACACCAGCCAGATGTAGGTCTGCAGGGGCATaGGCCTTAGCACCCAGGGCCGGTGATCCACTCGCA +
Preference number: 6 (lower is better)
Translates to: GHTPARCRSAGA*ALAPRAGDPLA
Trigger: TGCGAGTGGATCACCGGCCCTGGGTGCTAAGGCCCATGCCCCTGCAGACCTACATCTGGCTGGTGTATGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp GAACGCCACCAAGGCTCACCGTGGTGTGACCAGGTCTaGGCTGGATGGGACTGCTGCCCAGGCTCATGTGCA +
Preference number: 6 (lower is better)
Translates to: ERHQGSPWCDQV*AGWDCCPGSCA
Trigger: TGCACATGAGCCTGGGCAGCAGTCCCATCCAGCCAAGACCTGGTCACACCACGGTGAGCCTTGGTGGCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp CCTCGGCGTGGAAAGCCAGGCACTTGGACGAAGTTGTaGGGGCCTCCGAAGTTGATGGGGTGTGGAACGGGA +
Preference number: 6 (lower is better)
Translates to: PRRGKPGTWTKL*GPPKLMGCGTG
Trigger: TCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGTGCCTGGCTTTCCACGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp ACCGTCCACCTTGAGCAGCTCCATGCAGCCATGGAATaGTGTCTGGTTGGAGTGGCAGCCCCATCGACTGGC +
Preference number: 6 (lower is better)
Translates to: TVHLEQLHAAME*CLVGVAAPSTG
Trigger: GCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCATGGAGCTGCTCAAGGTGGACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp CCTCAGGCCAATCTTGCCGCGTGGGTTCCAGGCCAGTaGCACGATGCGGATGTAGCGAGCCGTAAAGTGGTA +
Preference number: 6 (lower is better)
Translates to: PQANLAAWVPGQ*HDADVASRKVV
Trigger: TACCACTTTACGGCTCGCTACATCCGCATCGTGCCACTGGCCTGGAACCCACGCGGCAAGATTGGCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GAAAGGGCCGGTCCATGCTGGAACCAGTCACTCGAGTaGTCCACAGCCTGTCATGCCGCACAACTGTCCACG +
Preference number: 6 (lower is better)
Translates to: ERAGPCWNQSLE*STACHAAQLST
Trigger: CGTGGACAGTTGTGCGGCATGACAGGCTGTGGACCACTCGAGTGACTGGTTCCAGCATGGACCGGCCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GGCCGGTGCAGTTGGGGAAGGTGCCCTCAGAGGCATTaGCACGGCCCTCCAAGTTCAGAGTCACTCCATTCA +
Preference number: 6 (lower is better)
Translates to: GRCSWGRCPQRH*HGPPSSESLHS
Trigger: TGAATGGAGTGACTCTGAACTTGGAGGGCCGTGCCAATGCCTCTGAGGGCACCTTCCCCAACTGCACCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GTGGTATCCAGGCACGTAACCAGGAGTGTCGTAGCCTaGAACATAGCCAGGCTCATAGCCCGGCACTGGCCG +
Preference number: 6 (lower is better)
Translates to: VVSRHVTRSVVA*NIARLIARHWP
Trigger: CGGCCAGTGCCGGGCTATGAGCCTGGCTATGTTCCAGGCTACGACACTCCTGGTTACGTGCCTGGATACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp CAGAGCGCTGACTTCCTCCCAGGAGGCATTCCAGTATaGGATGGCCCCCAGAAAGGGCCGGTCCATGCTGGA +
Preference number: 6 (lower is better)
Translates to: QSADFLPGGIPV*DGPQKGPVHAG
Trigger: TCCAGCATGGACCGGCCCTTTCTGGGGGCCATCCAATACTGGAATGCCTCCTGGGAGGAAGTCAGCGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp TGGCCGGTGCAGTTGGGGAAGGTGCCCTCAGAGGCATaGGCACGGCCCTCCAAGTTCAGAGTCACTCCATTC +
Preference number: 6 (lower is better)
Translates to: WPVQLGKVPSEA*ARPSKFRVTPF
Trigger: GAATGGAGTGACTCTGAACTTGGAGGGCCGTGCCAATGCCTCTGAGGGCACCTTCCCCAACTGCACCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp CCGTCCACCTTGAGCAGCTCCATGCAGCCATGGAATGCTGTCTGGTaGGAGTGGCAGCCCCATCGACTGGCTGGTTTGGGACAACCACCA +
Preference number: 6 (lower is better)
Translates to: PSTLSSSMQPWNAVW*EWQPHRLAGLGQPP
Trigger: TGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCATGGAGCTGCTCAAGGTGGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp TCCGCCAGCTCAGCAGTCATGGGCCGAGGGGTTCGGAAATGGGTCTaGAGAGGAGCCACATTGTTGAACCGGACACCAGACAGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: SASSAVMGRGVRKWV*RGATLLNRTPDRQP
Trigger: AGGCTGCCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCCTCGGCCCATGACTGCTGAGCTGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp ACAGCCCGGATCCGATGCTTCTTCATTAAGTCGATCTaGAGCCAGGGATTCGGGTCCCCAATCCGGGGCGAC +
Preference number: 6 (lower is better)
Translates to: TARIRCFFIKSI*SQGFGSPIRGD
Trigger: GTCGCCCCGGATTGGGGACCCGAATCCCTGGCTGCAGATCGACTTAATGAAGAAGCATCGGATCCGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp TCCAGTATTGGATGGCCCCCAGAAAGGGCCGGTCCATaGTGGAACCAGTCACTCGAGTGGTCCACAGCCTGT +
Preference number: 6 (lower is better)
Translates to: SSIGWPPERAGP*WNQSLEWSTAC
Trigger: ACAGGCTGTGGACCACTCGAGTGACTGGTTCCAGCATGGACCGGCCCTTTCTGGGGGCCATCCAATACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp GTCATGGGCCGAGGGGTTCGGAAATGGGTCTTGAGAGGAGCCACATaGTTGAACCGGACACCAGACAGGCAGCCTGAGAAACCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: VMGRGVRKWVLRGAT*LNRTPDRQPEKPGV
Trigger: CACCCCAGGTTTCTCAGGCTGCCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCCTCGGCCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp GCCGGTGATCCACTCGCAGCCGGGCCTGCTTCACGTTaGTTTCAGCTCGGACCAAATGCCACTCATCATCGT +
Preference number: 6 (lower is better)
Translates to: AGDPLAAGPASR*FQLGPNATHHR
Trigger: ACGATGATGAGTGGCATTTGGTCCGAGCTGAAATCAACGTGAAGCAGGCCCGGCTGCGAGTGGATCACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp CTGGCCGGGTGGTTAGCTGGTACACATAGGGACTGGTaGCCAACTGATACCGAAGCTGTAGGGTCCCGTCTT +
Preference number: 6 (lower is better)
Translates to: LAGWLAGTHRDW*PTDTEAVGSRL
Trigger: AAGACGGGACCCTACAGCTTCGGTATCAGTTGGGCACCAGTCCCTATGTGTACCAGCTAACCACCCGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GCGAACACGTCCCAAAGACTTTGGCTGGCGCCTCGCTaGAAGCGGTATGAGATGGCATCGTCGCCGTCAAAA +
Preference number: 6 (lower is better)
Translates to: ANTSQRLWLAPR*KRYEMASSPSK
Trigger: TTTTGACGGCGACGATGCCATCTCATACCGCTTCCAGCGAGGCGCCAGCCAAAGTCTTTGGGACGTGTTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp AGCTCCATGCAGCCATGGAATGCTGTCTGGTTGGAGTaGCAGCCCCATCGACTGGCTGGTTTGGGACAACCA +
Preference number: 6 (lower is better)
Translates to: SSMQPWNAVWLE*QPHRLAGLGQP
Trigger: TGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCATGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp ACCTTGAGCAGCTCCATGCAGCCATGGAATGCTGTCTaGTTGGAGTGGCAGCCCCATCGACTGGCTGGTTTG +
Preference number: 6 (lower is better)
Translates to: TLSSSMQPWNAV*LEWQPHRLAGL
Trigger: CAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCATGGAGCTGCTCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp AGTATTGGATGGCCCCCAGAAAGGGCCGGTCCATGCTaGAACCAGTCACTCGAGTGGTCCACAGCCTGTCAT +
Preference number: 6 (lower is better)
Translates to: SIGWPPERAGPC*NQSLEWSTACH
Trigger: ATGACAGGCTGTGGACCACTCGAGTGACTGGTTCCAGCATGGACCGGCCCTTTCTGGGGGCCATCCAATACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp AAGGTCAGGAGCCCCTTGTCTGTTCTCCACTGTGGCTaGTCGGCATCACAATTGCAGTGCAGTGCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: KVRSPLSVLHCG*SASQLQCSAGS
Trigger: GGACCCTGCACTGCACTGCAATTGTGATGCCGACCAGCCACAGTGGAGAACAGACAAGGGGCTCCTGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GCTCGGATCGGAGGGAAACGCAGTGCAGCTCCAGTGTaGAAGGAGATGGTGTTCCAGGAATTGCGGTCACCA +
Preference number: 6 (lower is better)
Translates to: ARIGGKRSAAPV*KEMVFQELRSP
Trigger: TGGTGACCGCAATTCCTGGAACACCATCTCCTTCCACACTGGAGCTGCACTGCGTTTCCCTCCGATCCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp TCACTGGCCGGGTGGTTAGCTGGTACACATAGGGACTaGTGCCCAACTGATACCGAAGCTGTAGGGTCCCGT +
Preference number: 6 (lower is better)
Translates to: SLAGWLAGTHRD*CPTDTEAVGSR
Trigger: ACGGGACCCTACAGCTTCGGTATCAGTTGGGCACCAGTCCCTATGTGTACCAGCTAACCACCCGGCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp CTCCTGTCTCCATCACACGCCCTAGATACAAGGCCTTaGGTGAGTCCAGCTGGCTGTCCACCAGGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: LLSPSHALDTRP*VSPAGCPPGER
Trigger: TCTCTCTCCTGGTGGACAGCCAGCTGGACTCACCCAAGGCCTTGTATCTAGGGCGTGTGATGGAGACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GCCAGCTCAGCAGTCATGGGCCGAGGGGTTCGGAAATaGGTCTTGAGAGGAGCCACATTGTTGAACCGGACA +
Preference number: 6 (lower is better)
Translates to: ASSAVMGRGVRK*VLRGATLLNRT
Trigger: TGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCCTCGGCCCATGACTGCTGAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp TTGAGCAGCTCCATGCAGCCATGGAATGCTGTCTGGTaGGAGTGGCAGCCCCATCGACTGGCTGGTTTGGGA +
Preference number: 6 (lower is better)
Translates to: LSSSMQPWNAVW*EWQPHRLAGLG
Trigger: TCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCATGGAGCTGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp AAACTGAAGCTTCTTGCGGCCAGTCTGCGCGATGGATACATTCACTaGCCCTTCGCTAAGCATCAGCTCCACATGACCCAGCCCGTCCCC +
Preference number: 6 (lower is better)
Translates to: KLKLLAASLRDGYIH*PFAKHQLHMTQPVP
Trigger: GGGGACGGGCTGGGTCATGTGGAGCTGATGCTTAGCGAAGGGCAAGTGAATGTATCCATCGCGCAGACTGGCCGCAAGAAGCTTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp CAGGCACTTGGACGAAGTTGTGAGGGCCTCCGAAGTTaGTGGGGTGTGGAACGGGATCCAAGCAACGGAAAG +
Preference number: 6 (lower is better)
Translates to: QALGRSCEGLRS*WGVERDPSNGK
Trigger: CTTTCCGTTGCTTGGATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp ACATTCACTTGCCCTTCGCTAAGCATCAGCTCCACATaGCCCAGCCCGTCCCCCAAGTGGGAGAAAAGGAGC +
Preference number: 6 (lower is better)
Translates to: TFTCPSLSISST*PSPSPKWEKRS
Trigger: GCTCCTTTTCTCCCACTTGGGGGACGGGCTGGGTCATGTGGAGCTGATGCTTAGCGAAGGGCAAGTGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp CCCGAAGAAGGTCGCATTGTGCCCTTTTTGGTAGAATaGTGTCCAGCTGTCCACACGGTCCCCGTAGAGCAG +
Preference number: 6 (lower is better)
Translates to: PEEGRIVPFLVE*CPAVHTVPVEQ
Trigger: CTGCTCTACGGGGACCGTGTGGACAGCTGGACACCATTCTACCAAAAAGGGCACAATGCGACCTTCTTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GACTTTGGCTGGCGCCTCGCTGGAAGCGGTATGAGATaGCATCGTCGCCGTCAAAATACAGGATGCTGGATG +
Preference number: 6 (lower is better)
Translates to: DFGWRLAGSGMR*HRRRQNTGCWM
Trigger: CATCCAGCATCCTGTATTTTGACGGCGACGATGCCATCTCATACCGCTTCCAGCGAGGCGCCAGCCAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GAGGGAAACGCAGTGCAGCTCCAGTGTGGAAGGAGATaGTGTTCCAGGAATTGCGGTCACCATAGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: EGNAVQLQCGRR*CSRNCGHHSSA
Trigger: TGCGCTGCTATGGTGACCGCAATTCCTGGAACACCATCTCCTTCCACACTGGAGCTGCACTGCGTTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp CGCCAGGATGGGAATCGTGGGTGGCCTTGGGCTCGTTaGTGTGGTAGGAGCCCTTGTATCGATGATTTTGCA +
Preference number: 6 (lower is better)
Translates to: RQDGNRGWPWAR*CGRSPCIDDFA
Trigger: TGCAAAATCATCGATACAAGGGCTCCTACCACACCAACGAGCCCAAGGCCACCCACGATTCCCATCCTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp TTGTCTGTTCTCCACTGTGGCTGGTCGGCATCACAATaGCAGTGCAGTGCAGGGTCCACACAGCTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: LSVLHCGWSASQ*QCSAGSTQLWS
Trigger: GGACCAGAGCTGTGTGGACCCTGCACTGCACTGCAATTGTGATGCCGACCAGCCACAGTGGAGAACAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp GCGCCTCTTAAGCTCTGCAGATCCCACATAGAGGGGTaGGTCATACACCAGCCAGATGTAGGTCTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: APLKLCRSHIEG*VIHQPDVGLQG
Trigger: CCCCTGCAGACCTACATCTGGCTGGTGTATGACCAACCCCTCTATGTGGGATCTGCAGAGCTTAAGAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp TCAGCAGTCATGGGCCGAGGGGTTCGGAAATGGGTCTaGAGAGGAGCCACATTGTTGAACCGGACACCAGAC +
Preference number: 6 (lower is better)
Translates to: SAVMGRGVRKWV*RGATLLNRTPD
Trigger: GTCTGGTGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCCTCGGCCCATGACTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp TGGAATGCTGTCTGGTTGGAGTGGCAGCCCCATCGACTGGCTGGTTaGGGACAACCACCAAAGAAGTATGAAGTCCCTGTGCGGATCAGC +
Preference number: 6 (lower is better)
Translates to: WNAVWLEWQPHRLAG*GQPPKKYEVPVRIS
Trigger: GCTGATCCGCACAGGGACTTCATACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp GGGTCAATGACTCCTGTCTCCATCACACGCCCTAGATACAAGGCCTaGGGTGAGTCCAGCTGGCTGTCCACCAGGAGAGAGAACTTCTGT +
Preference number: 6 (lower is better)
Translates to: GSMTPVSITRPRYKA*GESSWLSTRRENFC
Trigger: ACAGAAGTTCTCTCTCCTGGTGGACAGCCAGCTGGACTCACCCAAGGCCTTGTATCTAGGGCGTGTGATGGAGACAGGAGTCATTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp CCAAAGACTTTGGCTGGCGCCTCGCTGGAAGCGGTATaGGATGGCATCGTCGCCGTCAAAATACAGGATGCT +
Preference number: 6 (lower is better)
Translates to: PKTLAGASLEAV*DGIVAVKIQDA
Trigger: AGCATCCTGTATTTTGACGGCGACGATGCCATCTCATACCGCTTCCAGCGAGGCGCCAGCCAAAGTCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp CAGAAGCCATCATTCAGGCGGTACCCAGCAGCAAACTaGAGCTTCTTGCGGCCAGTCTGCGCGATGGATACA +
Preference number: 6 (lower is better)
Translates to: QKPSFRRYPAAN*SFLRPVCAMDT
Trigger: TGTATCCATCGCGCAGACTGGCCGCAAGAAGCTTCAGTTTGCTGCTGGGTACCGCCTGAATGATGGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp AGCTTCCGAAACTCTACCAGAGTGAGGTTGACCAGTTaGCCGTCCACCTTGAGCAGCTCCATGCAGCCATGG +
Preference number: 6 (lower is better)
Translates to: SFRNSTRVRLTS*PSTLSSSMQPW
Trigger: CCATGGCTGCATGGAGCTGCTCAAGGTGGACGGTCAACTGGTCAACCTCACTCTGGTAGAGTTTCGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp TGTTCTCTAGGAAGACACCCGAGGGAGCCGAGGTCCTaGAGTAGAATGAGACATCGAGGCTGTGGTTGGCTC +
Preference number: 6 (lower is better)
Translates to: CSLGRHPREPRS*SRMRHRGCGWL
Trigger: GAGCCAACCACAGCCTCGATGTCTCATTCTACTTCAGGACCTCGGCTCCCTCGGGTGTCTTCCTAGAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp GGCATAGCTCCACAGTTAGATTCTGACAGTTCTCCTTaGACCCGCATGGCCTCCGCCAGCTCAGCAGTCATG +
Preference number: 6 (lower is better)
Translates to: GIAPQLDSDSSP*TRMASASSAVM
Trigger: CATGACTGCTGAGCTGGCGGAGGCCATGCGGGTTCAAGGAGAACTGTCAGAATCTAACTGTGGAGCTATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp AGAGACAAGGCGTGGCATAGCTCCACAGTTAGATTCTaGCAGTTCTCCTTGAACCCGCATGGCCTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: RDKAWHSSTVRF*QFSLNPHGLRQ
Trigger: CTGGCGGAGGCCATGCGGGTTCAAGGAGAACTGTCAGAATCTAACTGTGGAGCTATGCCACGCCTTGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp AAAGAGTCCATAGTAGGAAGAAGCGCCCAGAGACCGTaGATACAGAGGCCCCACCAGCTCCTCATTGCAACC +
Preference number: 6 (lower is better)
Translates to: KESIVGRSAQRP*IQRPHQLLIAT
Trigger: GGTTGCAATGAGGAGCTGGTGGGGCCTCTGTATGCACGGTCTCTGGGCGCTTCTTCCTACTATGGACTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp AATACAGGATGCTGGATGTGTAGGGACAACCATAGATaGCCAGCCTCAGGCCAATCTTGCCGCGTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: NTGCWMCRDNHR*PASGQSCRVGS
Trigger: GGAACCCACGCGGCAAGATTGGCCTGAGGCTGGGCATCTATGGTTGTCCCTACACATCCAGCATCCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GACGAAGTTGTGAGGGCCTCCGAAGTTGATGGGGTGTaGAACGGGATCCAAGCAACGGAAAGCCACATTACC +
Preference number: 6 (lower is better)
Translates to: DEVVRASEVDGV*NGIQATESHIT
Trigger: GGTAATGTGGCTTTCCGTTGCTTGGATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAACTTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp TCTGGTTGGAGTGGCAGCCCCATCGACTGGCTGGTTTaGGACAACCACCAAAGAAGTATGAAGTCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: SGWSGSPIDWLV*DNHQRSMKSLC
Trigger: GCACAGGGACTTCATACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp TACAAAGGTCAGGAGCCCCTTGTCTGTTCTCCACTGTaGCTGGTCGGCATCACAATTGCAGTGCAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: YKGQEPLVCSPL*LVGITIAVQCR
Trigger: CCTGCACTGCACTGCAATTGTGATGCCGACCAGCCACAGTGGAGAACAGACAAGGGGCTCCTGACCTTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp ACACGCCCTAGATACAAGGCCTTGGGTGAGTCCAGCTaGCTGTCCACCAGGAGAGAGAACTTCTGTTCTGTC +
Preference number: 6 (lower is better)
Translates to: TRPRYKALGESS*LSTRRENFCSV
Trigger: GACAGAACAGAAGTTCTCTCTCCTGGTGGACAGCCAGCTGGACTCACCCAAGGCCTTGTATCTAGGGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp CTTCTTGCGGCCAGTCTGCGCGATGGATACATTCACTaGCCCTTCGCTAAGCATCAGCTCCACATGACCCAG +
Preference number: 6 (lower is better)
Translates to: LLAASLRDGYIH*PFAKHQLHMTQ
Trigger: CTGGGTCATGTGGAGCTGATGCTTAGCGAAGGGCAAGTGAATGTATCCATCGCGCAGACTGGCCGCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp GTCTGGTTGGAGTGGCAGCCCCATCGACTGGCTGGTTaGGGACAACCACCAAAGAAGTATGAAGTCCCTGTG +
Preference number: 6 (lower is better)
Translates to: VWLEWQPHRLAG*GQPPKKYEVPV
Trigger: CACAGGGACTTCATACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp GAGCTTCCGAAACTCTACCAGAGTGAGGTTGACCAGTaGACCGTCCACCTTGAGCAGCTCCATGCAGCCATG +
Preference number: 6 (lower is better)
Translates to: ELPKLYQSEVDQ*TVHLEQLHAAM
Trigger: CATGGCTGCATGGAGCTGCTCAAGGTGGACGGTCAACTGGTCAACCTCACTCTGGTAGAGTTTCGGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp GGGGTTCGGAAATGGGTCTTGAGAGGAGCCACATTGTaGAACCGGACACCAGACAGGCAGCCTGAGAAACCT +
Preference number: 6 (lower is better)
Translates to: GVRKWVLRGATL*NRTPDRQPEKP
Trigger: AGGTTTCTCAGGCTGCCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp TGCCGAGTCATTGACATTCCCGAAGAAGGTCGCATTGTGCCCTTTTaGGTAGAATGGTGTCCAGCTGTCCACACGGTCCCCGTAGAGCAG +
Preference number: 6 (lower is better)
Translates to: CRVIDIPEEGRIVPF*VEWCPAVHTVPVEQ
Trigger: CTGCTCTACGGGGACCGTGTGGACAGCTGGACACCATTCTACCAAAAAGGGCACAATGCGACCTTCTTCGGGAATGTCAATGACTCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp ACTGCATGGTTTTCCTGTGCCACAAAGTTCACCTCGTaGCAGAAGCCATCATTCAGGCGGTACCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: TAWFSCATKFTS*QKPSFRRYPAA
Trigger: TGCTGCTGGGTACCGCCTGAATGATGGCTTCTGGCACGAGGTGAACTTTGTGGCACAGGAAAACCATGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp GGAATGCTGTCTGGTTGGAGTGGCAGCCCCATCGACTaGCTGGTTTGGGACAACCACCAAAGAAGTATGAAG +
Preference number: 6 (lower is better)
Translates to: GMLSGWSGSPID*LVWDNHQRSMK
Trigger: CTTCATACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp GGTAGTGAAGGTCATGGCGGACCACTGCCGAGTCATTaGCATTCCCGAAGAAGGTCGCATTGTGCCCTTTTT +
Preference number: 6 (lower is better)
Translates to: GSEGHGGPLPSH*HSRRRSHCALF
Trigger: AAAAAGGGCACAATGCGACCTTCTTCGGGAATGTCAATGACTCGGCAGTGGTCCGCCATGACCTTCACTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp TTAAAAGCTCCCTGTGTGGCCACAGCCCGGATCCGATaGTTCTTCATTAAGTCGATCTGCAGCCAGGGATTC +
Preference number: 6 (lower is better)
Translates to: LKAPCVATARIR*FFIKSICSQGF
Trigger: GAATCCCTGGCTGCAGATCGACTTAATGAAGAAGCATCGGATCCGGGCTGTGGCCACACAGGGAGCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp AGCCGTAAAGTGGTAGTGAAGGTCATGGCGGACCACTaGCGAGTCATTGACATTCCCGAAGAAGGTCGCATT +
Preference number: 6 (lower is better)
Translates to: SRKVVVKVMADH*RVIDIPEEGRI
Trigger: AATGCGACCTTCTTCGGGAATGTCAATGACTCGGCAGTGGTCCGCCATGACCTTCACTACCACTTTACGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp GGTATGAGATGGCATCGTCGCCGTCAAAATACAGGATaGTGGATGTGTAGGGACAACCATAGATGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GMRWHRRRQNTG*WMCRDNHRCPA
Trigger: GGCTGGGCATCTATGGTTGTCCCTACACATCCAGCATCCTGTATTTTGACGGCGACGATGCCATCTCATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp CGGAAAGCCACATTACCCTCAAAGGTGATCCGCGAATaGCGCATCACTGCCATTTCTGCAATGTTGATCCGG +
Preference number: 6 (lower is better)
Translates to: RKATLPSKVIRE*RITAISAMLIR
Trigger: CCGGATCAACATTGCAGAAATGGCAGTGATGCGCCATTCGCGGATCACCTTTGAGGGTAATGTGGCTTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp ATTGACATTCCCGAAGAAGGTCGCATTGTGCCCTTTTaGGTAGAATGGTGTCCAGCTGTCCACACGGTCCCC +
Preference number: 6 (lower is better)
Translates to: IDIPEEGRIVPF*VEWCPAVHTVP
Trigger: GGGGACCGTGTGGACAGCTGGACACCATTCTACCAAAAAGGGCACAATGCGACCTTCTTCGGGAATGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp AAAATAACCGAGCTTCCGAAACTCTACCAGAGTGAGGTTGACCAGTaGACCGTCCACCTTGAGCAGCTCCATGCAGCCATGGAATGCTGT +
Preference number: 6 (lower is better)
Translates to: KITELPKLYQSEVDQ*TVHLEQLHAAMECC
Trigger: ACAGCATTCCATGGCTGCATGGAGCTGCTCAAGGTGGACGGTCAACTGGTCAACCTCACTCTGGTAGAGTTTCGGAAGCTCGGTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp GCGCAGAGGCCTCAGGAAGAACTGAGCTTCAGAATTTaGGCGGTTTGTATCACCTACCACTACCTGAGTGAC +
Preference number: 6 (lower is better)
Translates to: AQRPQEELSFRI*AVCITYHYLSD
Trigger: GTCACTCAGGTAGTGGTAGGTGATACAAACCGCTCAAATTCTGAAGCTCAGTTCTTCCTGAGGCCTCTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp CACAAAGTGATGGGCGTAACCATCCAGGGTGAAATTTaGATCTCGGCCATATCGATCCACCCGCACATAGTG +
Preference number: 6 (lower is better)
Translates to: HKVMGVTIQGEI*ISAISIHPHIV
Trigger: CACTATGTGCGGGTGGATCGATATGGCCGAGATGCAAATTTCACCCTGGATGGTTACGCCCATCACTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp AGCGCAGTGCTGACTGGAGGTTATAGCGCATCCATGTaGCGGTCTCAAAGAATCCACCAATATCGTGATTGC +
Preference number: 6 (lower is better)
Translates to: SAVLTGGYSASM*RSQRIHQYRDC
Trigger: GCAATCACGATATTGGTGGATTCTTTGAGACCGGCACATGGATGCGCTATAACCTCCAGTCAGCACTGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CCA 72 bp ATGAGATGGCATCGTCGCCGTCAAAATACAGGATGCTaGATGTGTAGGGACAACCATAGATGCCCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: MRWHRRRQNTGC*MCRDNHRCPAS
Trigger: TGAGGCTGGGCATCTATGGTTGTCCCTACACATCCAGCATCCTGTATTTTGACGGCGACGATGCCATCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 72 bp CTCGTTGGTGTGGTAGGAGCCCTTGTATCGATGATTTaGCAGATAGAACAGCACCAGCATTCCCACAAGCCC +
Preference number: 6 (lower is better)
Translates to: LVGVVGALVSMI*QIEQHQHSHKP
Trigger: GGGCTTGTGGGAATGCTGGTGCTGTTCTATCTGCAAAATCATCGATACAAGGGCTCCTACCACACCAACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp TCCGCGAATGGCGCATCACTGCCATTTCTGCAATGTTaGTCCGGTTGTAGATCACGTTTTCTATGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: SANGASLPFLQC*SGCRSRFLCSH
Trigger: GTGGCTGCATAGAAAACGTGATCTACAACCGGATCAACATTGCAGAAATGGCAGTGATGCGCCATTCGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp CGGGCCTGCTTCACGTTGATTTCAGCTCGGACCAAATaGCACTCATCATCGTTAAACTCAAAGTCATCCGAG +
Preference number: 6 (lower is better)
Translates to: RACFTLISARTK*HSSSLNSKSSE
Trigger: CTCGGATGACTTTGAGTTTAACGATGATGAGTGGCATTTGGTCCGAGCTGAAATCAACGTGAAGCAGGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp ATTACCCTCAAAGGTGATCCGCGAATGGCGCATCACTaGCATTTCTGCAATGTTGATCCGGTTGTAGATCAC +
Preference number: 6 (lower is better)
Translates to: ITLKGDPRMAHH*HFCNVDPVVDH
Trigger: GTGATCTACAACCGGATCAACATTGCAGAAATGGCAGTGATGCGCCATTCGCGGATCACCTTTGAGGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS CAA 90 bp TTAAACTCAAAGTCATCCGAGTGCACTGTCAGGTTCTCATCCCCATaGCCAATATCAAAGGCAAAGACCACATCCCGGGATGTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: LNSKSSECTVRFSSP*PISKAKTTSRDVLS
Trigger: GCTCAACACATCCCGGGATGTGGTCTTTGCCTTTGATATTGGCAATGGGGATGAGAACCTGACAGTGCACTCGGATGACTTTGAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS TCA 72 bp CAATATCGTGATTGCAGTATGGCCCATCAAAAGCTGTaGGGTCACAGTCACATGTGTAGTAGCTGTATCGCT +
Preference number: 6 (lower is better)
Translates to: QYRDCSMAHQKL*GHSHMCSSCIA
Trigger: AGCGATACAGCTACTACACATGTGACTGTGACCTCACAGCTTTTGATGGGCCATACTGCAATCACGATATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp AAAGGTGATCCGCGAATGGCGCATCACTGCCATTTCTaGAATGTTGATCCGGTTGTAGATCACGTTTTCTAT +
Preference number: 6 (lower is better)
Translates to: KGDPRMAHHCHF*NVDPVVDHVFY
Trigger: ATAGAAAACGTGATCTACAACCGGATCAACATTGCAGAAATGGCAGTGATGCGCCATTCGCGGATCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp TGTCACAATACACCACAAACGGCTTCAGGGGTCCACTaGCATCAGGATCAATGGTGTAGTTTCCAGAATATT +
Preference number: 6 (lower is better)
Translates to: CHNTPQTASGVH*HQDQWCSFQNI
Trigger: AATATTCTGGAAACTACACCATTGATCCTGATGGCAGTGGACCCCTGAAGCCGTTTGTGGTGTATTGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4
CDS GCA 72 bp TGCCACTCATCATCGTTAAACTCAAAGTCATCCGAGTaGACTGTCAGGTTCTCATCCCCATTGCCAATATCA +
Preference number: 6 (lower is better)
Translates to: CHSSSLNSKSSE*TVRFSSPLPIS
Trigger: TGATATTGGCAATGGGGATGAGAACCTGACAGTGCACTCGGATGACTTTGAGTTTAACGATGATGAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103109.4