Pregenerated sensors for CNTN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055022Ensembl transcript IDs: ENSMUST00000000109.11, ENSMUST00000068378.6, ENSMUST00000169825.8
Found 387 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGCACTaGTCCAGGAGCCAGCTAATTCTTTATTACCCGAGTTCTTCCACA | + |
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Preference number: 1 (lower is better) Translates to: ANKIGFDFSRNQTLH*SRSQLILYYPSSST Trigger: TGTGGAAGAACTCGGGTAATAAAGAATTAGCTGGCTCCTGGAGCAGTGCAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR CAA 90 bp | CACAGGTTTCCCTTTCACACCTCACAAATTCCTTCACAACAGCACTaGGGAGACATCCTCGCGCAGGACACTGCCGACCTCGCCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HRFPFHTSQIPSQQH*GDILAQDTADLACL Trigger: GAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAGGATGTCTCCCAAGTGCTGTTGTGAAGGAATTTGTGAGGTGTGAAAGGGAAACCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR GCA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTGAAGGGGTTCCTGAATaGCTCAGTCGTGATGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: TLPTSPASQLCIFFIGPLEGVPE*LSRDVL Trigger: CAACACATCACGACTGAGGCATTCAGGAACCCCTTC...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATGCCAGTTTTCAGTATTaGATTGAAATGGGAAACGAG | + |
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Preference number: 2 (lower is better) Translates to: LAQDTADLACLPALHILHASFQY*IEMGNE Trigger: CTCGTTTCCCATTTCAATGCAATACTGAAAACTGGC...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR CAA 90 bp | CCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTaGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: PECLSRDVLGNQLNS*LESNLFGLGWSRRD Trigger: ATCCCTGCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACTGAGGCATTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| 3UTR-3UTR TCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTATGAAGAGCATCCTCTaGGCAGGGATGAAAACAGCC | + |
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Preference number: 2 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPMKSIL*AGMKTA Trigger: GGCTGTTTTCATCCCTGCTCAGAGGATGCTCTTCAT...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| 3UTR CAA 90 bp | GAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTaGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: EGVPECLSRDVLGNQ*NSLLESNLFGLGWS Trigger: GCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| 3UTR-3UTR GCA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTCAAGGAACCAAACATTaGACTGCTCCAGGAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVQGTKH*TAPGAS Trigger: GCTGGCTCCTGGAGCAGTGCAATGTTTGGTTCCTTG...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR TCA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCATGAAGAGCATCCTCTaGGCAGGGATGAAAACAGCC | + |
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Preference number: 2 (lower is better) Translates to: ITRKTQRLYRKLTECSSPMKSIL*AGMKTA Trigger: GGCTGTTTTCATCCCTGCTCAGAGGATGCTCTTCAT...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CCA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTGCGCTGCAGCTTCTGTaGTTTGACATTGATGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVALQLL*FDIDEK Trigger: CTTCTCATCAATGTCAAACCACAGAAGCTGCAGCGC...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR CAA 90 bp | ATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTaGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: ILLDEGVPECLSRDV*GNQLNSLLESNLFG Trigger: GCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| 3UTR-3UTR TCA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTCTGTCATTCCACACATaGATAAACACAGCAGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVLSFHT*INTAVD Trigger: GTCTACTGCTGTGTTTATTCATGTGTGGAATGACAG...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGGAAGGGGTTCCTGAATaGCTCAGTCGTGATGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QQDCANKIGFDFSRNQTLEGVPE*LSRDVL Trigger: CAACACATCACGACTGAGGCATTCAGGAACCCCTTC...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR GCA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCGATGGTTTGTTGACATaGTTCTACTGGGAGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: ITRKTQRLYRKLTECSSPDGLLT*FYWESI Trigger: GATGCTCTCCCAGTAGAAGCATGTCAACAAACCATC...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGAGCGCTGCAGCTTCTGTaGTTTGACATTGATGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: EFILRHEAQNQNNENIQRALQLL*FDIDEK Trigger: CTTCTCATCAATGTCAAACCACAGAAGCTGCAGCGC...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR CAA 90 bp | GATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATaGCACTGCTCCAGGAGCCAGCTAATTCTTTATTACCCGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: DCANKIGFDFSRNQT*HCSRSQLILYYPSS Trigger: AGAACTCGGGTAATAAAGAATTAGCTGGCTCCTGGAGCAGTGCAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGAGACAATGTTCCAGATaGGCTGCAGCTTCTGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: QQDCANKIGFDFSRNQTLRQCSR*AAASVV Trigger: AACCACAGAAGCTGCAGCGCATCTGGAACATTGTCT...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGATACAGCCTAGGGCATTaGATTGAACACTGTAACTTG | + |
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Preference number: 2 (lower is better) Translates to: EFILRHEAQNQNNENIQRYSLGH*IEHCNL Trigger: CAAGTTACAGTGTTCAATTCAATGCCCTAGGCTGTA...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR TCA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTCTGTCATTCCACACATaGATAAACACAGCAGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLLSFHT*INTAVD Trigger: GTCTACTGCTGTGTTTATTCATGTGTGGAATGACAG...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAACACTTAGCAACATTCTaGTTTGGTATTTTTAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VHERVESIRHIFKLNNLQHLATF*FGIFSQ Trigger: CTGGCTAAAAATACCAAATCAGAATGTTGCTAAGTG...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR TCA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCCACTTAGCAACATTCTaGTTTGGTATTTTTAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ITRKTQRLYRKLTECSSPHLATF*FGIFSQ Trigger: CTGGCTAAAAATACCAAATCAGAATGTTGCTAAGTG...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR GCA 72 bp | GGAGACATCCTCGCGCAGGACACTGCCGACCTCGCCTaGCTCCCAGCTTTGCATATTCTTCATAGGACCACT | + |
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Preference number: 3 (lower is better) Translates to: GDILAQDTADLA*LPALHILHRTT Trigger: AGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAGGATGTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR CCA 72 bp | CCACACCCACACTCAGACACATCTCTGGGCACACCATaGACAATGAGGAAACACAGGTTTCCCTTTCACACC | + |
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Preference number: 3 (lower is better) Translates to: PHPHSDTSLGTP*TMRKHRFPFHT Trigger: GGTGTGAAAGGGAAACCTGTGTTTCCTCATTGTCCATGGTGTGCCCAGAGATGTGTCTGAGTGTGGGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CAA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATTTCTGTGGTTTGACATaGATGAGAAGAAAAGCACAA | + |
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Preference number: 3 (lower is better) Translates to: LAQDTADLACLPALHILHFCGLT*MRRKAQ Trigger: TTGTGCTTTTCTTCTCATCAATGTCAAACCACAGAA...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CAA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTTTGTTAGAGTCTAATTaGTTTGGCTTAGGATGGAGC | + |
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Preference number: 3 (lower is better) Translates to: TLPTSPASQLCIFFIGPLLLESN*FGLGWS Trigger: GCTCCATCCTAAGCCAAACAAATTAGACTCTAACAA...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CAA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTCCTGCATATGAATTCTaGACTCTACACCTTCTTGTA | + |
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Preference number: 3 (lower is better) Translates to: TLPTSPASQLCIFFIGPLPAYEF*TLHLLV Trigger: TACAAGAAGGTGTAGAGTCAAGAATTCATATGCAGG...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR TCA 72 bp | AAGCGCTCTACTTCCCCAAACCTGTCATTCCACACATaGATAAACACAGCAGTAGACAATGTTCCAGATGCG | + |
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Preference number: 3 (lower is better) Translates to: KRSTSPNLSFHT*INTAVDNVPDA Trigger: CGCATCTGGAACATTGTCTACTGCTGTGTTTATTCATGTGTGGAATGACAGGTTTGGGGAAGTAGAGCGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR TCA 72 bp | TCTAGCTGGATAAAGACGATCGCATTGCAGTATAAATaGAAGCGCTCTACTTCCCCAAACCTGTCATTCCAC | + |
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Preference number: 3 (lower is better) Translates to: SSWIKTIALQYK*KRSTSPNLSFH Trigger: GTGGAATGACAGGTTTGGGGAAGTAGAGCGCTTTCATTTATACTGCAATGCGATCGTCTTTATCCAGCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CAA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGATTGTTAGAGTCTAATTaGTTTGGCTTAGGATGGAGC | + |
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Preference number: 3 (lower is better) Translates to: VILLDEGVPECLSRDVLGLLESN*FGLGWS Trigger: GCTCCATCCTAAGCCAAACAAATTAGACTCTAACAA...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| 3UTR GCA 72 bp | ATAGGATTCGATTTCTCAAGGAACCAAACATTGCACTaGTCCAGGAGCCAGCTAATTCTTTATTACCCGAGT | + |
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Preference number: 3 (lower is better) Translates to: IGFDFSRNQTLH*SRSQLILYYPS Trigger: ACTCGGGTAATAAAGAATTAGCTGGCTCCTGGAGCAGTGCAATGTTTGGTTCCTTGAGAAATCGAATCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CAA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCAAACCTGGCGATGGTTaGTTGACATGCTTCTACTGG | + |
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Preference number: 3 (lower is better) Translates to: ITRKTQRLYRKLTECSSPKPGDG*LTCFYW Trigger: CCAGTAGAAGCATGTCAACAAACCATCGCCAGGTTT...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR GCA 72 bp | TTGAAAGTTATTCTTTTGGATGAAGGGGTTCCTGAATaGCTCAGTCGTGATGTGTTGGGAAATCAGTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: LKVILLDEGVPE*LSRDVLGNQLN Trigger: GTTCAACTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAACTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| 3UTR-3UTR CAA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTTTGAAAGTTATTCTTTaGGATGAAGGGGTTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPLKVIL*DEGVPE Trigger: TTCAGGAACCCCTTCATCCAAAAGAATAACTTTCAA...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| 3UTR CCA 72 bp | ATGAAACCTGGCGATGGTTTGTTGACATGCTTCTACTaGGAGAGCATCTGTTTTACCGATTTAAAAAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: MKPGDGLLTCFY*ESICFTDLKSF Trigger: GAAACTTTTTAAATCGGTAAAACAGATGCTCTCCCAGTAGAAGCATGTCAACAAACCATCGCCAGGTTTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CAA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCTTGTTAGAGTCTAATTaGTTTGGCTTAGGATGGAGC | + |
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Preference number: 3 (lower is better) Translates to: ITRKTQRLYRKLTECSSPLLESN*FGLGWS Trigger: GCTCCATCCTAAGCCAAACAAATTAGACTCTAACAA...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CAA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTGTTTTCAGTATTGCATaGAAATGGGAAACGAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVVFSIA*KWETSF Trigger: AAAGCTCGTTTCCCATTTCAATGCAATACTGAAAAC...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAATTGAAAGTTATTCTTTaGGATGAAGGGGTTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: VHERVESIRHIFKLNNLQLKVIL*DEGVPE Trigger: TTCAGGAACCCCTTCATCCAAAAGAATAACTTTCAA...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR TCA 72 bp | GAAATGGAATTCTGTAGCTTTTTCCAAACCTGCATATaGATTCTTGACTCTACACCTTCTTGTAAAGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: EMEFCSFFQTCI*ILDSTPSCKES Trigger: ACTCTCTTTACAAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATTCCATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| CDS-3UTR TCA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACACAAACGTaGGGTCCAAGGCAGGATCGA | + |
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Preference number: 4 (lower is better) Translates to: LAQDTADLACLPALHILHRTTQT*GPRQDR Trigger: TCGATCCTGCCTTGGACCTCACGTTTGTGTGGTCCT...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| CDS-3UTR GCA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATGCTGCTTCTTTGTCATaGCCAGCCCAGTACCGAATC | + |
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Preference number: 4 (lower is better) Translates to: LAQDTADLACLPALHILHAASLS*PAQYRI Trigger: GATTCGGTACTGGGCTGGGCATGACAAAGAAGCAGC...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| CDS-3UTR TCA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATCCTGAAATTTTGACTTaGGACACGACTCCGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LAQDTADLACLPALHILHPEILT*DTTPSP Trigger: GGGAGACGGAGTCGTGTCTCAAGTCAAAATTTCAGG...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| CDS-3UTR CCA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATTGCTCCATGAAAACTTaGGTTTTGGTGCGGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LAQDTADLACLPALHILHCSMKT*VLVRPW Trigger: CCAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCA...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| 3UTR CAA 72 bp | CCCTTTCACACCTCACAAATTCCTTCACAACAGCACTaGGGAGACATCCTCGCGCAGGACACTGCCGACCTC | + |
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Preference number: 4 (lower is better) Translates to: PFHTSQIPSQQH*GDILAQDTADL Trigger: GAGGTCGGCAGTGTCCTGCGCGAGGATGTCTCCCAAGTGCTGTTGTGAAGGAATTTGTGAGGTGTGAAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| CDS-3UTR CCA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTCGAACTGATGATCCTTaGTGGTTGGCTAGGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: TLPTSPASQLCIFFIGPLRTDDP*WLARRG Trigger: GCCCCTCCTAGCCAACCACCAAGGATCATCAGTTCG...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| CDS-3UTR GCA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATTTGCGATGTAGAGATTaGCGTTGGTCTGAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: LAQDTADLACLPALHILHLRCRD*RWSETQ Trigger: TTGTGTCTCAGACCAACGGCAATCTCTACATCGCAA...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATGCTGCTCTTCAAAAATaGGCCCAAATCCTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAQDTADLACLPALHILHAALQK*AQILCP Trigger: AGGACAAAGGATTTGGGCCCATTTTTGAAGAGCAGC...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGGCTGCGCATTTCGGATaGGCAGTTCCCCATTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQAAHFG*AVPHWR Trigger: ACGCCAATGGGGAACTGCTCATCCGAAATGCGCAGC...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGACCCACCGCCTACATCTaGGGGAGCCACATTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGPTAYI*GSHIWC Trigger: GCACCAAATGTGGCTCCCTCAGATGTAGGCGGTGGG...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGATCCTGGCTGGTGACCTaGACTCTGTGTGCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGSWLVT*TLCAAA Trigger: AGCAGCCGCACACAGAGTTCAGGTCACCAGCCAGGA...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGGGACAGCCCCTGACGTaGTTATCTCAGCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQGQPLT*LSQQCW Trigger: CCAGCACTGCTGAGATAAGCACGTCAGGGGCTGTCC...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTTGTCCACGATTGTCTaGGCCGTGCACGTGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQLSTIV*AVHVYR Trigger: CCGGTACACGTGCACGGCGCAGACAATCGTGGACAA...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTGCCTCCTGGGGGACCTaGGGGGCCTCGAACGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVASWGT*GASNDK Trigger: CTTGTCGTTCGAGGCCCCCCAGGTCCCCCAGGAGGC...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGAGGACCACACAAACGTaGGGTCCAAGGCAGGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQRTTQT*GPRQDR Trigger: TCGATCCTGCCTTGGACCTCACGTTTGTGTGGTCCT...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTTCCTGGCTGGTGACCTaGACTCTGTGTGCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPSWLVT*TLCAAA Trigger: AGCAGCCGCACACAGAGTTCAGGTCACCAGCCAGGA...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | ACCATGGACAATGAGGAAACACAGGTTTCCCTTTCACACCTCACAAATTCCTTCTCCTGGCTGGTGACCTaGACTCTGTGTGCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMDNEETQVSLSHLTNSFSWLVT*TLCAAA Trigger: AGCAGCCGCACACAGAGTTCAGGTCACCAGCCAGGA...GAAGGAATTTGTGAGGTGTGAAAGGGAAACCTGTGTTTCCTCATTGTCCATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCTTGTCCACGATTGTCTaGGCCGTGCACGTGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEILSTIV*AVHVYR Trigger: CCGGTACACGTGCACGGCGCAGACAATCGTGGACAA...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCTTGTCAGCTCTCTGTTaGTTCCGCCCCCACCGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEILSALC*FRPHRL Trigger: TAGGCGGTGGGGGCGGAACCAACAGAGAGCTGACAA...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTCTCGATCACATCACTaGAAGGTCCGCATCCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQSRSHH*KVRIRH Trigger: GTGCCGGATGCGGACCTTCCAGTGATGTGATCGAGA...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTCACTTTTCCTTCCAGTaGCTCTTCTGGGTAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLPTSPASQLCIFFIGPLHFSFQ*LFWVNG Trigger: ACCATTTACCCAGAAGAGTCACTGGAAGGAAAAGTG...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTCGCGTGCCCGGCAGTTaGGTGACACTTTTCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPRVPGS*VTLFLP Trigger: TGGAAGGAAAAGTGTCACTCAACTGCCGGGCACGCG...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTTAGAGATAGGGCTGTaGTTGTCGGAACCACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQLEIGL*LSEPRL Trigger: GAGCCGTGGTTCCGACAATCACAGCCCTATCTCTAA...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCCCCACCGCCTACATCTaGGGGAGCCACATTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRPTAYI*GSHIWC Trigger: GCACCAAATGTGGCTCCCTCAGATGTAGGCGGTGGG...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTAGTACTCCTGGCTGGTaGCCTGAACTCTGTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPSTPGW*PELCVR Trigger: CCGCACACAGAGTTCAGGTCACCAGCCAGGAGTACT...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTGTTCTCCAGTCTGGCTaGGTACTCCTGGCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPVLQSG*VLLAGD Trigger: GTCACCAGCCAGGAGTACTCAGCCAGACTGGAGAAC...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCGCTTCCCTGTGGCTATaGAAGGCCAGTAGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIASLWL*KASRGH Trigger: GTGACCTCTACTGGCCTTGCATAGCCACAGGGAAGC...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGACGGCTCCAAGTCAGTaGCACAGAGGTAGCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQTAPSQ*HRGSSD Trigger: ATCAGAGCTACCTCTGTGGCACTGACTTGGAGCCGT...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGGAATGGGCTTCCCTGTaGCTATGCAAGGCCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQEWASL*LCKASR Trigger: TCTACTGGCCTTGCATAGCCACAGGGAAGCCCATTC...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGCATACTCTCCGTCTCTaGGGATGGGGACTTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQHTLRL*GWGLLW Trigger: CCATAGAAGTCCCCATCCCCAGAGACGGAGAGTATG...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTCTCAGTTCCCCTTTGTaGTACGAGTATCCATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLPTSPASQLCIFFIGPLLSSPL*YEYPFF Trigger: GAAAAATGGATACTCGTATCACAAAGGGGAACTGAG...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCTTCGTGTGGGATTTGTaGTCACCAGAGTCCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIFVWDL*SPESQC Trigger: GCACTGGGACTCTGGTGATCACAAATCCCACACGAA...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTCCCACCGCCTACATCTaGGGGAGCCACATTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVPTAYI*GSHIWC Trigger: GCACCAAATGTGGCTCCCTCAGATGTAGGCGGTGGG...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTGCTTTCACTTTGACTTaGAACGCGGTGGAGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPAFTLT*NAVEGV Trigger: GACCCCCTCCACCGCGTTTCAAGTCAAAGTGAAAGC...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCCACAGAGAAGCACCATaGCCTTCCCTTCCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIHREAP*PSLPSP Trigger: AGGTGAAGGAAGGGAAGGGCATGGTGCTTCTCTGTG...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCTTGTCCACGATTGTCTaGGCCGTGCACGTGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRLSTIV*AVHVYR Trigger: CCGGTACACGTGCACGGCGCAGACAATCGTGGACAA...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCTCCTGTTTGAGGGTATaGTGGGCTCTCCTGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEISCLRV*WALLSL Trigger: TAGGGACAGGAGAGCCCAGCATACCCTCAAACAGGA...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAACTCTGTGTGCGGCTaGTTCTTTGTCATGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEINSVCG*FFVMPS Trigger: GCTGGGCATGACAAAGAAGCAGCCGCACACAGAGTT...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAACTCTGTGTGCGGCTaGTTCTTTGTCATGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGNSVCG*FFVMPS Trigger: GCTGGGCATGACAAAGAAGCAGCCGCACACAGAGTT...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTCTCCATTTGTAAACTaGAAATGGGCTGGCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQSPFVN*KWAGAC Trigger: GCACGCGCCAGCCCATTTCCAGTTTACAAATGGAGA...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCGAATGGGCTTCCCTGTaGCTATGCAAGGCCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIEWASL*LCKASR Trigger: TCTACTGGCCTTGCATAGCCACAGGGAAGCCCATTC...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGCCTCCTGGGGGACCTaGGGGGCCTCGAACGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIASWGT*GASNDK Trigger: CTTGTCGTTCGAGGCCCCCCAGGTCCCCCAGGAGGC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCTTGTCAGCTCTCTGTTaGTTCCGCCCCCACCGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRLSALC*FRPHRL Trigger: TAGGCGGTGGGGGCGGAACCAACAGAGAGCTGACAA...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTGAAGGTTCTCCAGTCTaGCTGAGTACTCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPEGSPV*LSTPGW Trigger: CCAGCCAGGAGTACTCAGCCAGACTGGAGAACCTTC...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCCTCCGTCTCTGGGGATaGGGACTTCTATGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEILRLWG*GLLWSV Trigger: AACACTCCATAGAAGTCCCCATCCCCAGAGACGGAG...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGACATACTCTCCGTCTCTaGGGATGGGGACTTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGHTLRL*GWGLLW Trigger: CCATAGAAGTCCCCATCCCCAGAGACGGAGAGTATG...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTTAGCAGGAGATGGCTaGCCAGCAATGGCATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQLAGDG*PAMAFS Trigger: TGAAAATGCCATTGCTGGTCAGCCATCTCCTGCTAA...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTCTGGGTAAATGGTATTaGTTGGCTGCTCTTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLPTSPASQLCIFFIGPLLGKWY*LAALQK Trigger: TTTTTGAAGAGCAGCCAATCAATACCATTTACCCAG...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGACCACCTCAGTGTCATTaGTATGCTCTACCCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGPPQCH*YALPTQ Trigger: CTGAGTGGGTAGAGCATATCAATGACACTGAGGTGG...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGCTAAAGCCAGGATCTTaGGCTCAGCGTTGGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQLKPGS*AQRWHK Trigger: TTTATGCCAACGCTGAGCTCAAGATCCTGGCTTTAG...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCAGGACCACACAAACGTaGGGTCCAAGGCAGGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRRTTQT*GPRQDR Trigger: TCGATCCTGCCTTGGACCTCACGTTTGTGTGGTCCT...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGCCATGTTTCCTTCAATaGTTGGGGGATCTGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQPCFLQ*LGDLSS Trigger: CGAAGACAGATCCCCCAATCATTGAAGGAAACATGG...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCCAGCACCGTCTGTTTTaGTCCTGTTTGAGGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIQHRLF*SCLRVC Trigger: GCATACCCTCAAACAGGATCAAAACAGACGGTGCTG...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTGATAGTGCCACAACGTaGTCCCATGTGATTATATAT | + |
|
Preference number: 4 (lower is better) Translates to: TLPTSPASQLCIFFIGPLDSATT*SHVIIY Trigger: ATATATAATCACATGGGATCACGTTGTGGCACTATC...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGGACAATGAGGAAACACAGGTTTCCCTTTCACACCTCACAAATTCCTTCGCCAGTAGAGGTCACTaGCTATGTCCACCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TMDNEETQVSLSHLTNSFASRGH*LCPPQC Trigger: ACACTGAGGTGGACATAGGCAGTGACCTCTACTGGC...GAAGGAATTTGTGAGGTGTGAAAGGGAAACCTGTGTTTCCTCATTGTCCATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTTCCTGTTTGAGGGTATaGTGGGCTCTCCTGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPSCLRV*WALLSL Trigger: TAGGGACAGGAGAGCCCAGCATACCCTCAAACAGGA...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGACTGGGAGCATCTTGTaGAGAGTTGATGACAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQTGSIL*RVDDSY Trigger: GTAGCTGTCATCAACTCTGCACAAGATGCTCCCAGT...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTGCTGCTTCTTTGTCATaGCCAGCCCAGTACCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPAASLS*PAQYRI Trigger: GATTCGGTACTGGGCTGGGCATGACAAAGAAGCAGC...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGATCTCCATTTGTAAACTaGAAATGGGCTGGCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGSPFVN*KWAGAC Trigger: GCACGCGCCAGCCCATTTCCAGTTTACAAATGGAGA...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGGTAGCTAAGATCATCTaGGAAGTGGTAGGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQVAKII*EVVGRI Trigger: GATCCTCCCTACCACTTCCCAGATGATCTTAGCTAC...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | ACCATGGACAATGAGGAAACACAGGTTTCCCTTTCACACCTCACAAATTCCTTCGAATGGGCTTCCCTGTaGCTATGCAAGGCCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TMDNEETQVSLSHLTNSFEWASL*LCKASR Trigger: TCTACTGGCCTTGCATAGCCACAGGGAAGCCCATTC...GAAGGAATTTGTGAGGTGTGAAAGGGAAACCTGTGTTTCCTCATTGTCCATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTCTCTTCTCCATCAAATaGCTTAAACGCCACTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLPTSPASQLCIFFIGPLLFSIK*LKRHYV Trigger: TACATAGTGGCGTTTAAGCCATTTGATGGAGAAGAG...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCCTGTGGGGGCTTCACTaGGAGCATCTTGTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRLWGLH*EHLVQS Trigger: ACTCTGCACAAGATGCTCCCAGTGAAGCCCCCACAG...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAATGATCCTTGGTGGTTaGCTAGGAGGGGCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGMILGG*LGGAFL Trigger: CAGAAAAGCCCCTCCTAGCCAACCACCAAGGATCAT...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCACTGATGATCCTTGGTaGTTGGCTAGGAGGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEITDDPW*LARRGF Trigger: AAAGCCCCTCCTAGCCAACCACCAAGGATCATCAGT...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCCGAACTGATGATCCTTaGTGGTTGGCTAGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRRTDDP*WLARRG Trigger: GCCCCTCCTAGCCAACCACCAAGGATCATCAGTTCG...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTTCCTCAGACACTCCATaGCCATATCTTCTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPSSDTP*PYLLCQ Trigger: CTGGCACAGAAGATATGGTCATGGAGTGTCTGAGGA...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTCAGCACCGTCTGTTTTaGTCCTGTTTGAGGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPQHRLF*SCLRVC Trigger: GCATACCCTCAAACAGGATCAAAACAGACGGTGCTG...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAACACGCCTGAAATTTTaGCTTGAGACACGACTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGTRLKF*LETRLR Trigger: ACGGAGTCGTGTCTCAAGTCAAAATTTCAGGCGTGT...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCACACGCCTGAAATTTTaGCTTGAGACACGACTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEITRLKF*LETRLR Trigger: ACGGAGTCGTGTCTCAAGTCAAAATTTCAGGCGTGT...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCGAGATTAGCAGGAGATaGCTGACCAGCAATGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIEISRR*LTSNGI Trigger: AATGCCATTGCTGGTCAGCCATCTCCTGCTAATCTC...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAGTAGCTAAGATCATCTaGGAAGTGGTAGGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGVAKII*EVVGRI Trigger: GATCCTCCCTACCACTTCCCAGATGATCTTAGCTAC...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGACACTTTTCCTTCCAGTaGCTCTTCTGGGTAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGHFSFQ*LFWVNG Trigger: ACCATTTACCCAGAAGAGTCACTGGAAGGAAAAGTG...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGACGCGTGCCCGGCAGTTaGGTGACACTTTTCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STPSCKESLYLGMKHKTRRVPGS*VTLFLP Trigger: TGGAAGGAAAAGTGTCACTCAACTGCCGGGCACGCG...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTTTCGTGTGGGATTTGTaGTCACCAGAGTCCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVFVWDL*SPESQC Trigger: GCACTGGGACTCTGGTGATCACAAATCCCACACGAA...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAATCTTTCCAGTCATCTaGGAGAATCGTCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGIFPVI*ENRLGL Trigger: CAGACCAAGACGATTCTCTCAGATGACTGGAAAGAT...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGAAGTACTCCTGGCTGGTaGCCTGAACTCTGTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRSTPGW*PELCVR Trigger: CCGCACACAGAGTTCAGGTCACCAGCCAGGAGTACT...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGAGTTCTCCAGTCTGGCTaGGTACTCCTGGCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRVLQSG*VLLAGD Trigger: GTCACCAGCCAGGAGTACTCAGCCAGACTGGAGAAC...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTGTGATTATATATCGTaGGCCAGATCTCACCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQCDYIS*ARSHRT Trigger: AGTTCGGTGAGATCTGGCTCACGATATATAATCACA...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGATTGCGATGTAGAGATTaGCGTTGGTCTGAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGLRCRD*RWSETQ Trigger: TTGTGTCTCAGACCAACGGCAATCTCTACATCGCAA...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTTGCTTATCTCAGCAGTaGTGGGCATTGGTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPCLSQQ*WALVLA Trigger: TGCTAGAACCAATGCCCAGCACTGCTGAGATAAGCA...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGAGGACAGCCCCTGACGTaGTTATCTCAGCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STPSCKESLYLGMKHKTRGQPLT*LSQQCW Trigger: CCAGCACTGCTGAGATAAGCACGTCAGGGGCTGTCC...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTTGAACATAGATTCTTaGCTGGTGCTTGTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQLNIDS*LVLVLS Trigger: GGAAAGGACAAGCACCAGGCAAGAATCTATGTTCAA...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCAAAGACGCAGCACACTaGATGGTGGCATTTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRKDAAH*MVAFSP Trigger: TGGGGAAAATGCCACCATGCAGTGTGCTGCGTCTTT...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTTCCTGTTTGAGGGTATaGTGGGCTCTCCTGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVSCLRV*WALLSL Trigger: TAGGGACAGGAGAGCCCAGCATACCCTCAAACAGGA...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAACTGTGGGGGCTTCACTaGGAGCATCTTGTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHERVESIRHIFKLNNLQLWGLH*EHLVQS Trigger: ACTCTGCACAAGATGCTCCCAGTGAAGCCCCCACAG...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCATGATCCTTGGTGGTTaGCTAGGAGGGGCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRMILGG*LGGAFL Trigger: CAGAAAAGCCCCTCCTAGCCAACCACCAAGGATCAT...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTCGCGTGCCCGGCAGTTaGGTGACACTTTTCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIRVPGS*VTLFLP Trigger: TGGAAGGAAAAGTGTCACTCAACTGCCGGGCACGCG...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGCTGCGCATTTCGGATaGGCAGTTCCCCATTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIAAHFG*AVPHWR Trigger: ACGCCAATGGGGAACTGCTCATCCGAAATGCGCAGC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTGCTGCGCATTTCGGATaGGCAGTTCCCCATTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLAAHFG*AVPHWR Trigger: ACGCCAATGGGGAACTGCTCATCCGAAATGCGCAGC...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGTTCTCCAGTCTGGCTaGGTACTCCTGGCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIVLQSG*VLLAGD Trigger: GTCACCAGCCAGGAGTACTCAGCCAGACTGGAGAAC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAAAGGCTCCCACTTCAATaGAGTACTGGGTGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHERVESIRHIFKLNNLQRLPLQ*STGCRE Trigger: TTCCCGACACCCAGTACTTCATTGAAGTGGGAGCCT...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGAAGACTCGACATTTaGGATGTAGAGATTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIRRLDI*DVEIAV Trigger: AACGGCAATCTCTACATCGCAAATGTCGAGTCTTCT...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCTGCTTATCTCAGCAGTaGTGGGCATTGGTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRCLSQQ*WALVLA Trigger: TGCTAGAACCAATGCCCAGCACTGCTGAGATAAGCA...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGGGACAGCCCCTGACGTaGTTATCTCAGCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLGQPLT*LSQQCW Trigger: CCAGCACTGCTGAGATAAGCACGTCAGGGGCTGTCC...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGATTGAACATAGATTCTTaGCTGGTGCTTGTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGLNIDS*LVLVLS Trigger: GGAAAGGACAAGCACCAGGCAAGAATCTATGTTCAA...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGCTTCCCTGTGGCTATaGAAGGCCAGTAGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFASLWL*KASRGH Trigger: GTGACCTCTACTGGCCTTGCATAGCCACAGGGAAGC...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCTTATCTCAGCAGTGCTaGGCATTGGTTCTAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRLSQQC*ALVLAP Trigger: AGGTGCTAGAACCAATGCCCAGCACTGCTGAGATAA...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTTTGTCAGCTCTCTGTTaGTTCCGCCCCCACCGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLLSALC*FRPHRL Trigger: TAGGCGGTGGGGGCGGAACCAACAGAGAGCTGACAA...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGAACACATGCTTCCAATaGACAGATATCTCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLDEGVPECLSRDVLGNQNTCFQ*TDISED Trigger: ATCCTCTGAGATATCTGTCCATTGGAAGCATGTGTT...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGAAGGTTCTCCAGTCTaGCTGAGTACTCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFEGSPV*LSTPGW Trigger: CCAGCCAGGAGTACTCAGCCAGACTGGAGAACCTTC...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTTCTCGATCACATCACTaGAAGGTCCGCATCCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFSRSHH*KVRIRH Trigger: GTGCCGGATGCGGACCTTCCAGTGATGTGATCGAGA...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTCGAACTGATGATCCTTaGTGGTTGGCTAGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFRTDDP*WLARRG Trigger: GCCCCTCCTAGCCAACCACCAAGGATCATCAGTTCG...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTGGATGGGGACTTCTATaGAGTGTTTATGGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPGWGLL*SVYGLR Trigger: TCTCAACCCATAAACACTCCATAGAAGTCCCCATCC...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | ACCATGGACAATGAGGAAACACAGGTTTCCCTTTCACACCTCACAAATTCCTTCGGATGGGGACTTCTATaGAGTGTTTATGGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TMDNEETQVSLSHLTNSFGWGLL*SVYGLR Trigger: TCTCAACCCATAAACACTCCATAGAAGTCCCCATCC...GAAGGAATTTGTGAGGTGTGAAAGGGAAACCTGTGTTTCCTCATTGTCCATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCCATACTCTCCGTCTCTaGGGATGGGGACTTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: ITRKTQRLYRKLTECSSPHTLRL*GWGLLW Trigger: CCATAGAAGTCCCCATCCCCAGAGACGGAGAGTATG...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| 3UTR CAA 72 bp | GATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTaGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: DEGVPECLSRDV*GNQLNSLLESN Trigger: ATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCCTGGGTAAATGGTATTaGTTGGCTGCTCTTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEILGKWY*LAALQK Trigger: TTTTTGAAGAGCAGCCAATCAATACCATTTACCCAG...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | ACCATGGACAATGAGGAAACACAGGTTTCCCTTTCACACCTCACAAATTCCTTCCTCAGTTCCCCTTTGTaGTACGAGTATCCATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TMDNEETQVSLSHLTNSFLSSPL*YEYPFF Trigger: GAAAAATGGATACTCGTATCACAAAGGGGAACTGAG...GAAGGAATTTGTGAGGTGTGAAAGGGAAACCTGTGTTTCCTCATTGTCCATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGGCTTTCACTTTGACTTaGAACGCGGTGGAGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLAFTLT*NAVEGV Trigger: GACCCCCTCCACCGCGTTTCAAGTCAAAGTGAAAGC...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGCTTTCACTTTGACTTaGAACGCGGTGGAGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIAFTLT*NAVEGV Trigger: GACCCCCTCCACCGCGTTTCAAGTCAAAGTGAAAGC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTTGTGATTATATATCGTaGGCCAGATCTCACCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPCDYIS*ARSHRT Trigger: AGTTCGGTGAGATCTGGCTCACGATATATAATCACA...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCGATAGTGCCACAACGTaGTCCCATGTGATTATATAT | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIDSATT*SHVIIY Trigger: ATATATAATCACATGGGATCACGTTGTGGCACTATC...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTATGGTATTGATTGGCTaGTCTTCAAAAATGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPMVLIG*SSKMGP Trigger: TGGGCCCATTTTTGAAGAGCAGCCAATCAATACCAT...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGACACAGAGAAGCACCATaGCCTTCCCTTCCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRHREAP*PSLPSP Trigger: AGGTGAAGGAAGGGAAGGGCATGGTGCTTCTCTGTG...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGATATATGTCCTTGAACTaGACCACAATATCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGYMSLN*TTISAG Trigger: TCCTGCTGATATTGTGGTGCAGTTCAAGGACATATA...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGAGCCAGTAGAGGTCACTaGCTATGTCCACCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRASRGH*LCPPQC Trigger: ACACTGAGGTGGACATAGGCAGTGACCTCTACTGGC...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGGCTTCCCTGTGGCTATaGAAGGCCAGTAGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLASLWL*KASRGH Trigger: GTGACCTCTACTGGCCTTGCATAGCCACAGGGAAGC...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGACCTGCGTGTTTCAGCTaGGCATTTCGGATGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRPACFS*AFRMSS Trigger: ACTGCTCATCCGAAATGCGCAGCTGAAACACGCAGG...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGCTGCTTCTTTGTCATaGCCAGCCCAGTACCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFAASLS*PAQYRI Trigger: GATTCGGTACTGGGCTGGGCATGACAAAGAAGCAGC...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGAAACTCTGTGTGCGGCTaGTTCTTTGTCATGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRNSVCG*FFVMPS Trigger: GCTGGGCATGACAAAGAAGCAGCCGCACACAGAGTT...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTTGTAGAGATTGCCGTTaGTCTGAGACACAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPCRDCR*SETQIF Trigger: GAAGATTTGTGTCTCAGACCAACGGCAATCTCTACA...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATATCAGCAGGATATaGCTTTGTTGTTCGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGNISRI*LCCSFR Trigger: CCTGAACGAACAACAAAGCCATATCCTGCTGATATT...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTTTTTCTGCTATGCACTaGTACATCCCGGCATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPFSAMH*YIPAFS Trigger: TGAAAATGCCGGGATGTACCAGTGCATAGCAGAAAA...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAATGCTCCATGAAAACTTaGGTTTTGGTGCGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHERVESIRHIFKLNNLQCSMKT*VLVRPW Trigger: CCAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCA...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCCTCTTCTCCATCAAATaGCTTAAACGCCACTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEILFSIK*LKRHYV Trigger: TACATAGTGGCGTTTAAGCCATTTGATGGAGAAGAG...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTCTGTGGGGGCTTCACTaGGAGCATCTTGTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLLWGLH*EHLVQS Trigger: ACTCTGCACAAGATGCTCCCAGTGAAGCCCCCACAG...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAACACATGCTTCCAATaGACAGATATCTCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VILLDEGVPECLSRDVLGNTCFQ*TDISED Trigger: ATCCTCTGAGATATCTGTCCATTGGAAGCATGTGTT...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGAAGGTTCTCCAGTCTaGCTGAGTACTCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIEGSPV*LSTPGW Trigger: CCAGCCAGGAGTACTCAGCCAGACTGGAGAACCTTC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| 3UTR CAA 72 bp | CTCAGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTaGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRDVLGNQLNS*LESNLFGLGWS Trigger: GCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGATCCTCAGACACTCCATaGCCATATCTTCTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STPSCKESLYLGMKHKTRSSDTP*PYLLCQ Trigger: CTGGCACAGAAGATATGGTCATGGAGTGTCTGAGGA...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGACCACCTCAGTGTCATTaGTATGCTCTACCCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRPPQCH*YALPTQ Trigger: CTGAGTGGGTAGAGCATATCAATGACACTGAGGTGG...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTTTCGTGTGGGATTTGTaGTCACCAGAGTCCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIFVWDL*SPESQC Trigger: GCACTGGGACTCTGGTGATCACAAATCCCACACGAA...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGTTAGAGATAGGGCTGTaGTTGTCGGAACCACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLLEIGL*LSEPRL Trigger: GAGCCGTGGTTCCGACAATCACAGCCCTATCTCTAA...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTCAGCACCGTCTGTTTTaGTCCTGTTTGAGGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFQHRLF*SCLRVC Trigger: GCATACCCTCAAACAGGATCAAAACAGACGGTGCTG...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTAGGCTCCCACTTCAATaGAGTACTGGGTGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIRLPLQ*STGCRE Trigger: TTCCCGACACCCAGTACTTCATTGAAGTGGGAGCCT...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGAGGCTCCCACTTCAATaGAGTACTGGGTGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLRLPLQ*STGCRE Trigger: TTCCCGACACCCAGTACTTCATTGAAGTGGGAGCCT...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCACACGCCTGAAATTTTaGCTTGAGACACGACTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ITRKTQRLYRKLTECSSPTRLKF*LETRLR Trigger: ACGGAGTCGTGTCTCAAGTCAAAATTTCAGGCGTGT...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTTTGCGATGTAGAGATTaGCGTTGGTCTGAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVLRCRD*RWSETQ Trigger: TTGTGTCTCAGACCAACGGCAATCTCTACATCGCAA...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGCCAGTAGAGGTCACTaGCTATGTCCACCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIASRGH*LCPPQC Trigger: ACACTGAGGTGGACATAGGCAGTGACCTCTACTGGC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGCCTGCGTGTTTCAGCTaGGCATTTCGGATGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLPACFS*AFRMSS Trigger: ACTGCTCATCCGAAATGCGCAGCTGAAACACGCAGG...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTCCTGCGTGTTTCAGCTaGGCATTTCGGATGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIPACFS*AFRMSS Trigger: ACTGCTCATCCGAAATGCGCAGCTGAAACACGCAGG...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTACGGCTCCAAGTCAGTaGCACAGAGGTAGCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINITAPSQ*HRGSSD Trigger: ATCAGAGCTACCTCTGTGGCACTGACTTGGAGCCGT...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCGTAAATGGTATTGATTaGCTGCTCTTCAAAAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIVNGID*LLFKNG Trigger: CCCATTTTTGAAGAGCAGCCAATCAATACCATTTAC...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCTTATCTCAGCAGTGCTaGGCATTGGTTCTAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ITRKTQRLYRKLTECSSPLSQQC*ALVLAP Trigger: AGGTGCTAGAACCAATGCCCAGCACTGCTGAGATAA...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCTTTTCTGCTATGCACTaGTACATCCCGGCATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRFSAMH*YIPAFS Trigger: TGAAAATGCCGGGATGTACCAGTGCATAGCAGAAAA...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGAATCGTCTTGGTCTaGATCGTGTATTTAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: FFWMKGFLNASVVMCWEIRIVLV*IVYLEI Trigger: TATCTCTAAATACACGATCCAGACCAAGACGATTCT...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTATGATCCTTGGTGGTTaGCTAGGAGGGGCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFMILGG*LGGAFL Trigger: CAGAAAAGCCCCTCCTAGCCAACCACCAAGGATCAT...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGTCCTCAGACACTCCATaGCCATATCTTCTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLSSDTP*PYLLCQ Trigger: CTGGCACAGAAGATATGGTCATGGAGTGTCTGAGGA...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTCCACCTCAGTGTCATTaGTATGCTCTACCCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIPPQCH*YALPTQ Trigger: CTGAGTGGGTAGAGCATATCAATGACACTGAGGTGG...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGACTAAAGCCAGGATCTTaGGCTCAGCGTTGGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: STPSCKESLYLGMKHKTRLKPGS*AQRWHK Trigger: TTTATGCCAACGCTGAGCTCAAGATCCTGGCTTTAG...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAAATCTTTCCAGTCATCTaGGAGAATCGTCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHERVESIRHIFKLNNLQIFPVI*ENRLGL Trigger: CAGACCAAGACGATTCTCTCAGATGACTGGAAAGAT...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTCCTGAAATTTTGACTTaGGACACGACTCCGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIPEILT*DTTPSP Trigger: GGGAGACGGAGTCGTGTCTCAAGTCAAAATTTCAGG...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTAAAGACGCAGCACACTaGATGGTGGCATTTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIKDAAH*MVAFSP Trigger: TGGGGAAAATGCCACCATGCAGTGTGCTGCGTCTTT...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGAACTGGGAGCATCTTGTaGAGAGTTGATGACAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRTGSIL*RVDDSY Trigger: GTAGCTGTCATCAACTCTGCACAAGATGCTCCCAGT...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGAGAGATTAGCAGGAGATaGCTGACCAGCAATGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: STPSCKESLYLGMKHKTREISRR*LTSNGI Trigger: AATGCCATTGCTGGTCAGCCATCTCCTGCTAATCTC...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGTCTCCATTTGTAAACTaGAAATGGGCTGGCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLSPFVN*KWAGAC Trigger: GCACGCGCCAGCCCATTTCCAGTTTACAAATGGAGA...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCAATATCAGCAGGATATaGCTTTGTTGTTCGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRNISRI*LCCSFR Trigger: CCTGAACGAACAACAAAGCCATATCCTGCTGATATT...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTTGCTCCATGAAAACTTaGGTTTTGGTGCGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINICSMKT*VLVRPW Trigger: CCAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCA...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTAGAATCGTCTTGGTCTaGATCGTGTATTTAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPRIVLV*IVYLEI Trigger: TATCTCTAAATACACGATCCAGACCAAGACGATTCT...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCAACACATGCTTCCAATaGACAGATATCTCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NQLNSLLESNLFGLGWSRNTCFQ*TDISED Trigger: ATCCTCTGAGATATCTGTCCATTGGAAGCATGTGTT...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTACTGATGATCCTTGGTaGTTGGCTAGGAGGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLTDDPW*LARRGF Trigger: AAAGCCCCTCCTAGCCAACCACCAAGGATCATCAGT...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGTTAGCAGGAGATGGCTaGCCAGCAATGGCATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLLAGDG*PAMAFS Trigger: TGAAAATGCCATTGCTGGTCAGCCATCTCCTGCTAA...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTCTAAAGCCAGGATCTTaGGCTCAGCGTTGGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINILKPGS*AQRWHK Trigger: TTTATGCCAACGCTGAGCTCAAGATCCTGGCTTTAG...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTCCATGTTTCCTTCAATaGTTGGGGGATCTGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIPCFLQ*LGDLSS Trigger: CGAAGACAGATCCCCCAATCATTGAAGGAAACATGG...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCTGTGATTATATATCGTaGGCCAGATCTCACCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ITRKTQRLYRKLTECSSPCDYIS*ARSHRT Trigger: AGTTCGGTGAGATCTGGCTCACGATATATAATCACA...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGAGCTGCTCTTCAAAAATaGGCCCAAATCCTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STPSCKESLYLGMKHKTRAALQK*AQILCP Trigger: AGGACAAAGGATTTGGGCCCATTTTTGAAGAGCAGC...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGTAGCTAAGATCATCTaGGAAGTGGTAGGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIVAKII*EVVGRI Trigger: GATCCTCCCTACCACTTCCCAGATGATCTTAGCTAC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGAGTTTCCTTCAATGATTaGGGGATCTGTCTTCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: STPSCKESLYLGMKHKTRVSFND*GICLRI Trigger: GATGCGAAGACAGATCCCCCAATCATTGAAGGAAAC...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGTTTCCTTCAATGATTaGGGGATCTGTCTTCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFVSFND*GICLRI Trigger: GATGCGAAGACAGATCCCCCAATCATTGAAGGAAAC...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCCTGGGTAAATGGTATTaGTTGGCTGCTCTTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ITRKTQRLYRKLTECSSPLGKWY*LAALQK Trigger: TTTTTGAAGAGCAGCCAATCAATACCATTTACCCAG...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTCACTTTTCCTTCCAGTaGCTCTTCTGGGTAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIHFSFQ*LFWVNG Trigger: ACCATTTACCCAGAAGAGTCACTGGAAGGAAAAGTG...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTCTCAGTTCCCCTTTGTaGTACGAGTATCCATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFLSSPL*YEYPFF Trigger: GAAAAATGGATACTCGTATCACAAAGGGGAACTGAG...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGATTGTGCTAATAAAATAGGATTCGATTTCTCAAGGAACCAAACATTGATCTTTCCAGTCATCTaGGAGAATCGTCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQDCANKIGFDFSRNQTLIFPVI*ENRLGL Trigger: CAGACCAAGACGATTCTCTCAGATGACTGGAAAGAT...CAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATTAGCACAATCTTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTATGGTATTGATTGGCTaGTCTTCAAAAATGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFMVLIG*SSKMGP Trigger: TGGGCCCATTTTTGAAGAGCAGCCAATCAATACCAT...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTAGAAGACTCGACATTTaGGATGTAGAGATTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFRRLDI*DVEIAV Trigger: AACGGCAATCTCTACATCGCAAATGTCGAGTCTTCT...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGCTGCTCTTCAAAAATaGGCCCAAATCCTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIAALQK*AQILCP Trigger: AGGACAAAGGATTTGGGCCCATTTTTGAAGAGCAGC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGATGTAGAGATTGCCGTTaGTCTGAGACACAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRCRDCR*SETQIF Trigger: GAAGATTTGTGTCTCAGACCAACGGCAATCTCTACA...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTGTTTCCTTCAATGATTaGGGGATCTGTCTTCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLVSFND*GICLRI Trigger: GATGCGAAGACAGATCCCCCAATCATTGAAGGAAAC...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| 3UTR CAA 72 bp | ATGTTCCAGATGCGCTGCAGCTTCTGTGGTTTGACATaGATGAGAAGAAAAGCACAAAACAATTTCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: MFQMRCSFCGLT*MRRKAQNNFRL Trigger: TAATCTGAAATTGTTTTGTGCTTTTCTTCTCATCAATGTCAAACCACAGAAGCTGCAGCGCATCTGGAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTTATACTTAGGCATGAAGCACAAAACCAGAACAATGAGAACATTCAGAGAGATAGTGCCACAACGTaGTCCCATGTGATTATATAT | + |
|
Preference number: 4 (lower is better) Translates to: EFILRHEAQNQNNENIQRDSATT*SHVIIY Trigger: ATATATAATCACATGGGATCACGTTGTGGCACTATC...TCTCTGAATGTTCTCATTGTTCTGGTTTTGTGCTTCATGCCTAAGTATAAACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTATGGTATTGATTGGCTaGTCTTCAAAAATGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIMVLIG*SSKMGP Trigger: TGGGCCCATTTTTGAAGAGCAGCCAATCAATACCAT...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTAGAAGACTCGACATTTaGGATGTAGAGATTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIRRLDI*DVEIAV Trigger: AACGGCAATCTCTACATCGCAAATGTCGAGTCTTCT...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGATATATGTCCTTGAACTaGACCACAATATCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: STPSCKESLYLGMKHKTRYMSLN*TTISAG Trigger: TCCTGCTGATATTGTGGTGCAGTTCAAGGACATATA...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTTTGAACATAGATTCTTaGCTGGTGCTTGTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLLNIDS*LVLVLS Trigger: GGAAAGGACAAGCACCAGGCAAGAATCTATGTTCAA...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTTGTAGAGATTGCCGTTaGTCTGAGACACAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLCRDCR*SETQIF Trigger: GAAGATTTGTGTCTCAGACCAACGGCAATCTCTACA...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTTTTTCTGCTATGCACTaGTACATCCCGGCATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLFSAMH*YIPAFS Trigger: TGAAAATGCCGGGATGTACCAGTGCATAGCAGAAAA...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| 3UTR CAA 72 bp | AATAAAATAGGATTCGATTTCTCAAGGAACCAAACATaGCACTGCTCCAGGAGCCAGCTAATTCTTTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: NKIGFDFSRNQT*HCSRSQLILYY Trigger: GTAATAAAGAATTAGCTGGCTCCTGGAGCAGTGCAATGTTTGGTTCCTTGAGAAATCGAATCCTATTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTTATATGTCCTTGAACTaGACCACAATATCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIYMSLN*TTISAG Trigger: TCCTGCTGATATTGTGGTGCAGTTCAAGGACATATA...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGTAAATGGTATTGATTaGCTGCTCTTCAAAAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFVNGID*LLFKNG Trigger: CCCATTTTTGAAGAGCAGCCAATCAATACCATTTAC...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTAATATCAGCAGGATATaGCTTTGTTGTTCGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTININISRI*LCCSFR Trigger: CCTGAACGAACAACAAAGCCATATCCTGCTGATATT...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTAGAATCGTCTTGGTCTaGATCGTGTATTTAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLGNQLNSLLESNLFRIVLV*IVYLEI Trigger: TATCTCTAAATACACGATCCAGACCAAGACGATTCT...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTCTCTTCTCCATCAAATaGCTTAAACGCCACTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINILFSIK*LKRHYV Trigger: TACATAGTGGCGTTTAAGCCATTTGATGGAGAAGAG...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS-3UTR CCA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGTAAATGGTATTGATTaGCTGCTCTTCAAAAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIQETALLEHILHTINIVNGID*LLFKNG Trigger: CCCATTTTTGAAGAGCAGCCAATCAATACCATTTAC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 90 bp | GGGCAGGAGCAAGCTGAGGAGACTCGAAGACAGCGTGGACACGCCTaGAATTTTGACTTGAGACACGACTCCGTCTCCCCCGTCGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQEQAEETRRQRGHA*NFDLRHDSVSPVAV Trigger: CACAGCGACGGGGGAGACGGAGTCGTGTCTCAAGTCAAAATTTCAGGCGTGTCCACGCTGTCTTCGAGTCTCCTCAGCTTGCTCCTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 90 bp | CGAACGACAAGGTCAGCGGAAGCCGAGGAATTGTCCACGATTGTCTaGGCCGTGCACGTGTACCGGCCTGCGTGTTTCAGCTGCGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RTTRSAEAEELSTIV*AVHVYRPACFSCAF Trigger: AAATGCGCAGCTGAAACACGCAGGCCGGTACACGTGCACGGCGCAGACAATCGTGGACAATTCCTCGGCTTCCGCTGACCTTGTCGTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS TCA 90 bp | TGTCGGGAAGAAGGTTCTCCAGTCTGGCTGAGTACTCCTGGCTGGTaGCCTGAACTCTGTGTGCGGCTGCTTCTTTGTCATGCCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CREEGSPVWLSTPGW*PELCVRLLLCHAQP Trigger: GGGCTGGGCATGACAAAGAAGCAGCCGCACACAGAGTTCAGGTCACCAGCCAGGAGTACTCAGCCAGACTGGAGAACCTTCTTCCCGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS TCA 90 bp | CTGAGGAGACTCGAAGACAGCGTGGACACGCCTGAAATTTTGACTTaGGACACGACTCCGTCTCCCCCGTCGCTGTGTGCTCGAACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRRLEDSVDTPEILT*DTTPSPPSLCARTS Trigger: CGAGGTTCGAGCACACAGCGACGGGGGAGACGGAGTCGTGTCTCAAGTCAAAATTTCAGGCGTGTCCACGCTGTCTTCGAGTCTCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CCA 90 bp | GGTCCGCATCCGGCACTGTTGCAGGCTCCCACTTCAATGAAGTACTaGGTGTCGGGAAGAAGGTTCTCCAGTCTGGCTGAGTACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPHPALLQAPTSMKY*VSGRRFSSLAEYSW Trigger: CCAGGAGTACTCAGCCAGACTGGAGAACCTTCTTCCCGACACCCAGTACTTCATTGAAGTGGGAGCCTGCAACAGTGCCGGATGCGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS TCA 90 bp | GGAAGAAGGTTCTCCAGTCTGGCTGAGTACTCCTGGCTGGTGACCTaGACTCTGTGTGCGGCTGCTTCTTTGTCATGCCCAGCCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GRRFSSLAEYSWLVT*TLCAAASLSCPAQY Trigger: GTACTGGGCTGGGCATGACAAAGAAGCAGCCGCACACAGAGTTCAGGTCACCAGCCAGGAGTACTCAGCCAGACTGGAGAACCTTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS TCA 90 bp | CACTGGAAGGTCCGCATCCGGCACTGTTGCAGGCTCCCACTTCAATaGAGTACTGGGTGTCGGGAAGAAGGTTCTCCAGTCTGGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HWKVRIRHCCRLPLQ*STGCREEGSPVWLS Trigger: ACTCAGCCAGACTGGAGAACCTTCTTCCCGACACCCAGTACTTCATTGAAGTGGGAGCCTGCAACAGTGCCGGATGCGGACCTTCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS-3UTR CAA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATGATGATCCTTGGTGGTaGGCTAGGAGGGGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAQDTADLACLPALHILHDDPWW*ARRGFS Trigger: AGAAAAGCCCCTCCTAGCCAACCACCAAGGATCATC...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
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| CDS GCA 90 bp | GCTCAGAGTTGCCTCCGTGCTCCTGACCATTCCGTAGTTGTTGGATaGCAGGCAGTAGTACACCCCAGCGTCTTTCTGTTTGTCCGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AQSCLRAPDHSVVVG*QAVVHPSVFLFVRV Trigger: AACCCGGACAAACAGAAAGACGCTGGGGTGTACTACTGCCTGGCATCCAACAACTACGGAATGGTCAGGAGCACGGAGGCAACTCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CTCGCGCAGGACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATTTGCTCCATGAAAACTaGGGTTTTGGTGCGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LAQDTADLACLPALHILHLLHEN*GFGAAL Trigger: CAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCAA...ATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGTCCTGCGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS TCA 90 bp | TTCAATGAAGTACTGGGTGTCGGGAAGAAGGTTCTCCAGTCTGGCTaGGTACTCCTGGCTGGTGACCTGAACTCTGTGTGCGGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FNEVLGVGKKVLQSG*VLLAGDLNSVCGCF Trigger: GAAGCAGCCGCACACAGAGTTCAGGTCACCAGCCAGGAGTACTCAGCCAGACTGGAGAACCTTCTTCCCGACACCCAGTACTTCATTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CCA 90 bp | CCCCGTCGCTGTGTGCTCGAACCTCGACAACATACTCTCCGTCTCTaGGGATGGGGACTTCTATGGAGTGTTTATGGGTTGAGAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRRCVLEPRQHTLRL*GWGLLWSVYGLRTA Trigger: AGCTGTTCTCAACCCATAAACACTCCATAGAAGTCCCCATCCCCAGAGACGGAGAGTATGTTGTCGAGGTTCGAGCACACAGCGACGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CCA 90 bp | CGCTGTGTGCTCGAACCTCGACAACATACTCTCCGTCTCTGGGGATaGGGACTTCTATGGAGTGTTTATGGGTTGAGAACAGCTTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RCVLEPRQHTLRLWG*GLLWSVYGLRTACR Trigger: ACGGCAAGCTGTTCTCAACCCATAAACACTCCATAGAAGTCCCCATCCCCAGAGACGGAGAGTATGTTGTCGAGGTTCGAGCACACAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS GCA 90 bp | CACACAAACGTGAGGTCCAAGGCAGGATCGAAAGACGCAGCACACTaGATGGTGGCATTTTCCCCAACAGTGATGTCAGCATTGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTNVRSKAGSKDAAH*MVAFSPTVMSALIG Trigger: CCCAATCAATGCTGACATCACTGTTGGGGAAAATGCCACCATGCAGTGTGCTGCGTCTTTCGATCCTGCCTTGGACCTCACGTTTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCCCGCATCCGGCACTGTaGCAGGCTCCCACTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FFWMKGFLNASVVMCWEIPHPAL*QAPTSM Trigger: CATTGAAGTGGGAGCCTGCAACAGTGCCGGATGCGG...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 90 bp | GAACCTCGACAACATACTCTCCGTCTCTGGGGATGGGGACTTCTATaGAGTGTTTATGGGTTGAGAACAGCTTGCCGTCATGTTGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EPRQHTLRLWGWGLL*SVYGLRTACRHVGH Trigger: ATGGCCAACATGACGGCAAGCTGTTCTCAACCCATAAACACTCCATAGAAGTCCCCATCCCCAGAGACGGAGAGTATGTTGTCGAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTCAGCAGGATATGGCTTaGTTGTTCGTTCAGGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: TLPTSPASQLCIFFIGPLQQDMA*LFVQES Trigger: CGATTCCTGAACGAACAACAAAGCCATATCCTGCTG...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGGGCTTTCACTTTGACTaGAAACGCGGTGGAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLDEGVPECLSRDVLGNQGFHFD*KRGGGG Trigger: ACCCCCTCCACCGCGTTTCAAGTCAAAGTGAAAGCC...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGATGTGCGGCTGCTTCTTaGTCATGCCCAGCCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VILLDEGVPECLSRDVLGCAAAS*SCPAQY Trigger: GTACTGGGCTGGGCATGACAAAGAAGCAGCCGCACA...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 90 bp | ACACATGCTTCCAATGGACAGATATCTCAGAGGATGATAACACTTTaGCCCCTACCTCTGTGGGGGCTTCACTGGGAGCATCTTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: THASNGQISQRMITL*PLPLWGLHWEHLVQ Trigger: CTGCACAAGATGCTCCCAGTGAAGCCCCCACAGAGGTAGGGGTCAAAGTGTTATCATCCTCTGAGATATCTGTCCATTGGAAGCATGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 90 bp | TGGGGATGGGGACTTCTATGGAGTGTTTATGGGTTGAGAACAGCTTaGCGTCATGTTGGCCATCCGGTCTATAGAGTATCTTGTAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGWGLLWSVYGLRTA*RHVGHPVYRVSCSL Trigger: CAGGCTACAAGATACTCTATAGACCGGATGGCCAACATGACGGCAAGCTGTTCTCAACCCATAAACACTCCATAGAAGTCCCCATCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 90 bp | ATATATCGTGAGCCAGATCTCACCGAACTGATGATCCTTGGTGGTTaGCTAGGAGGGGCTTTTCTGGTGAAGGTCTCGATCACATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: IYREPDLTELMILGG*LGGAFLVKVSITSL Trigger: CAGTGATGTGATCGAGACCTTCACCAGAAAAGCCCCTCCTAGCCAACCACCAAGGATCATCAGTTCGGTGAGATCTGGCTCACGATATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGATTCTTGCCTGGTGCTaGTCCTTTCCCCGGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLDEGVPECLSRDVLGNQILAWC*SFPRMF Trigger: GAACATCCGGGGAAAGGACAAGCACCAGGCAAGAAT...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCGGCTTTCACTTTGACTaGAAACGCGGTGGAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FFWMKGFLNASVVMCWEIGFHFD*KRGGGG Trigger: ACCCCCTCCACCGCGTTTCAAGTCAAAGTGAAAGCC...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | ACACTGCCGACCTCGCCTGCCTCCCAGCTTTGCATATTCTTCATAGGACCACTTGGCCCATCTCCTTTATaGTTGAAGGCTTTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLPTSPASQLCIFFIGPLGPSPL*LKAFTL Trigger: CAAAGTGAAAGCCTTCAACAATAAAGGAGATGGGCC...AAGTGGTCCTATGAAGAATATGCAAAGCTGGGAGGCAGGCGAGGTCGGCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTGCGCGTGCCCGGCAGTaGAGTGACACTTTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVARARQ*SDTFPS Trigger: GGAAGGAAAAGTGTCACTCAACTGCCGGGCACGCGC...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | ACCATGGACAATGAGGAAACACAGGTTTCCCTTTCACACCTCACAAATTCCTTCAGGAATTGTCCACGATaGTCTGCGCCGTGCACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TMDNEETQVSLSHLTNSFRNCPR*SAPCTC Trigger: ACACGTGCACGGCGCAGACAATCGTGGACAATTCCT...GAAGGAATTTGTGAGGTGTGAAAGGGAAACCTGTGTTTCCTCATTGTCCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTAGGAATTGTCCACGATaGTCTGCGCCGTGCACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPRNCPR*SAPCTC Trigger: ACACGTGCACGGCGCAGACAATCGTGGACAATTCCT...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAAGGCGCCCACGTTATaGTCAGCTCTCTGTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFWMKGFLNASVVMCWEIKAPTL*SALCWF Trigger: GAACCAACAGAGAGCTGACAATAACGTGGGCGCCTT...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 90 bp | TGCAAGGCCAGTAGAGGTCACTGCCTATGTCCACCTCAGTGTCATTaGTATGCTCTACCCACTCAGGAAACGCTTGAACATAGATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CKASRGHCLCPPQCH*YALPTQETLEHRFL Trigger: CAAGAATCTATGTTCAAGCGTTTCCTGAGTGGGTAGAGCATATCAATGACACTGAGGTGGACATAGGCAGTGACCTCTACTGGCCTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 90 bp | GAGTATTCTGCTGCTGTTAACGAGCCACTCCGTCCCTTTGCTCCATaGAAACTTGGGTTTTGGTGCGGCCTTGGGTTTACATTCAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: EYSAAVNEPLRPFAP*KLGFWCGLGFTFND Trigger: ATCATTGAATGTAAACCCAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCAAAGGGACGGAGTGGCTCGTTAACAGCAGCAGAATACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 90 bp | GGACACAAAGCAGGAGTAGTTGCCTCTGTCAGAAGACTCGACATTTaGGATGTAGAGATTGCCGTTGGTCTGAGACACAAATCTTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GHKAGVVASVRRLDI*DVEIAVGLRHKSSL Trigger: AAGCGAAGATTTGTGTCTCAGACCAACGGCAATCTCTACATCGCAAATGTCGAGTCTTCTGACAGAGGCAACTACTCCTGCTTTGTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | ACCATGGACAATGAGGAAACACAGGTTTCCCTTTCACACCTCACAAATTCCTTCATTCTTGCCTGGTGCTaGTCCTTTCCCCGGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TMDNEETQVSLSHLTNSFILAWC*SFPRMF Trigger: GAACATCCGGGGAAAGGACAAGCACCAGGCAAGAAT...GAAGGAATTTGTGAGGTGTGAAAGGGAAACCTGTGTTTCCTCATTGTCCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGATTGCTCCATGAAAACTaGGGTTTTGGTGCGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VILLDEGVPECLSRDVLGLLHEN*GFGAAL Trigger: CAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCAA...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAACCGCATCCGGCACTGTaGCAGGCTCCCACTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VHERVESIRHIFKLNNLQPHPAL*QAPTSM Trigger: CATTGAAGTGGGAGCCTGCAACAGTGCCGGATGCGG...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGCGCGTGCCCGGCAGTaGAGTGACACTTTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLGNQLNSLLESNLFARARQ*SDTFPS Trigger: GGAAGGAAAAGTGTCACTCAACTGCCGGGCACGCGC...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGCTTGAACATAGATTCTaGCCTGGTGCTTGTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLDEGVPECLSRDVLGNQLEHRF*PGACPF Trigger: GAAAGGACAAGCACCAGGCAAGAATCTATGTTCAAG...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCCCACTCAGGAAACGCTaGAACATAGATTCTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FFWMKGFLNASVVMCWEIPLRKR*NIDSCL Trigger: CAGGCAAGAATCTATGTTCAAGCGTTTCCTGAGTGG...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGATCCACCTCAGTGTCATaGATATGCTCTACCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: VILLDEGVPECLSRDVLGSTSVS*ICSTHS Trigger: TGAGTGGGTAGAGCATATCAATGACACTGAGGTGGA...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGGGTTTTGGTGCGGCCTaGGGTTTACATTCAATGATA | + |
|
Preference number: 5 (lower is better) Translates to: LLDEGVPECLSRDVLGNQGFGAA*GLHSMI Trigger: TATCATTGAATGTAAACCCAAGGCCGCACCAAAACC...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCGATGATCCTTGGTGGTaGGCTAGGAGGGGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NQLNSLLESNLFGLGWSRDDPWW*ARRGFS Trigger: AGAAAAGCCCCTCCTAGCCAACCACCAAGGATCATC...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 90 bp | TCCTTCAATGATTGGGGGATCTGTCTTCGCATCTTTCCAGTCATCTaGGAGAATCGTCTTGGTCTGGATCGTGTATTTAGAGATAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFNDWGICLRIFPVI*ENRLGLDRVFRDRA Trigger: AGCCCTATCTCTAAATACACGATCCAGACCAAGACGATTCTCTCAGATGACTGGAAAGATGCGAAGACAGATCCCCCAATCATTGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGCGCGTGCCCGGCAGTaGAGTGACACTTTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLIQETALLEHILHTINIARARQ*SDTFPS Trigger: GGAAGGAAAAGTGTCACTCAACTGCCGGGCACGCGC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTCCAGCGTCTTTCTGTTaGTCCGGGTTGTTGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPPASFC*SGLLIT Trigger: TGTTATCAACAACCCGGACAAACAGAAAGACGCTGG...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTCAGCAGGATATGGCTTaGTTGTTCGTTCAGGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPQQDMA*LFVQES Trigger: CGATTCCTGAACGAACAACAAAGCCATATCCTGCTG...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTCCACTCAGGAAACGCTaGAACATAGATTCTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPPLRKR*NIDSCL Trigger: CAGGCAAGAATCTATGTTCAAGCGTTTCCTGAGTGG...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAAAGGAATTGTCCACGATaGTCTGCGCCGTGCACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VHERVESIRHIFKLNNLQRNCPR*SAPCTC Trigger: ACACGTGCACGGCGCAGACAATCGTGGACAATTCCT...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGTCAAATCCACTGCTTTaGCTGACTCCATGTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLDEGVPECLSRDVLGNQSNPLL*LTPCFL Trigger: AAGGAAACATGGAGTCAGCAAAAGCAGTGGATTTGA...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCGCAGCACCGTCTGTTTaGATCCTGTTTGAGGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: NQLNSLLESNLFGLGWSRAAPSV*ILFEGM Trigger: CATACCCTCAAACAGGATCAAAACAGACGGTGCTGC...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAGGCCCATCTCCTTTATaGTTGAAGGCTTTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VILLDEGVPECLSRDVLGGPSPL*LKAFTL Trigger: CAAAGTGAAAGCCTTCAACAATAAAGGAGATGGGCC...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCTTCACTGGGAGCATCTaGTGCAGAGTTGATGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NQLNSLLESNLFGLGWSRFTGSI*CRVDDS Trigger: GCTGTCATCAACTCTGCACAAGATGCTCCCAGTGAA...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTTGTGCGGCTGCTTCTTaGTCATGCCCAGCCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLGNQLNSLLESNLFCAAAS*SCPAQY Trigger: GTACTGGGCTGGGCATGACAAAGAAGCAGCCGCACA...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGATGTGCGGCTGCTTCTTaGTCATGCCCAGCCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: STPSCKESLYLGMKHKTRCAAAS*SCPAQY Trigger: GTACTGGGCTGGGCATGACAAAGAAGCAGCCGCACA...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS TCA 90 bp | TCTTCAAAAATGGGCCCAAATCCTTTGTCCTCCTCAGACACTCCATaGCCATATCTTCTGTGCCAGGTAAAGTCTCCTAGACAAGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSKMGPNPLSSSDTP*PYLLCQVKSPRQDV Trigger: AACATCTTGTCTAGGAGACTTTACCTGGCACAGAAGATATGGTCATGGAGTGTCTGAGGAGGACAAAGGATTTGGGCCCATTTTTGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 90 bp | TCAGGAACAGGGTTCCCTAGAGCGAAACACTCTAAAGTCACATTTTaGCCCATCATGGTGTATATGTCCTTGAACTGCACCACAATATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGTGFPRAKHSKVTF*PIMVYMSLNCTTIS Trigger: TGATATTGTGGTGCAGTTCAAGGACATATACACCATGATGGGCCAAAATGTGACTTTAGAGTGTTTCGCTCTAGGGAACCCTGTTCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCCAGCAGGATATGGCTTaGTTGTTCGTTCAGGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: NQLNSLLESNLFGLGWSRQQDMA*LFVQES Trigger: CGATTCCTGAACGAACAACAAAGCCATATCCTGCTG...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCATGAAAACTTGGGTTTaGGTGCGGCCTTGGGTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: NQLNSLLESNLFGLGWSRMKTWV*VRPWVY Trigger: GTAAACCCAAGGCCGCACCAAAACCCAAGTTTTCAT...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCAGACAGTGATGTCAGCATaGATTGGGGCCAAAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: LLDEGVPECLSRDVLGNQTVMSA*IGAKII Trigger: AATTATTTTGGCCCCAATCAATGCTGACATCACTGT...CTGATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCTCAAATCCACTGCTTTaGCTGACTCCATGTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FFWMKGFLNASVVMCWEISNPLL*LTPCFL Trigger: AAGGAAACATGGAGTCAGCAAAAGCAGTGGATTTGA...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTGCAGCACCGTCTGTTTaGATCCTGTTTGAGGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVAAPSV*ILFEGM Trigger: CATACCCTCAAACAGGATCAAAACAGACGGTGCTGC...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTCCAGCGTCTTTCTGTTaGTCCGGGTTGTTGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVPASFC*SGLLIT Trigger: TGTTATCAACAACCCGGACAAACAGAAAGACGCTGG...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTATTCTTGCCTGGTGCTaGTCCTTTCCCCGGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLGNQLNSLLESNLFILAWC*SFPRMF Trigger: GAACATCCGGGGAAAGGACAAGCACCAGGCAAGAAT...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTTATTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAGATTCATTTCAAAAGTaGGAGCTAAAGCCAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: VILLDEGVPECLSRDVLGDSFQK*ELKPGS Trigger: AGATCCTGGCTTTAGCTCCAACTTTTGAAATGAATC...TCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTGGATGAAGGGGTTCCTGAATGCCTCAGTCGTGATGTGTTGGGAAATCGATTCATTTCAAAAGTaGGAGCTAAAGCCAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: FFWMKGFLNASVVMCWEIDSFQK*ELKPGS Trigger: AGATCCTGGCTTTAGCTCCAACTTTTGAAATGAATC...GATTTCCCAACACATCACGACTGAGGCATTCAGGAACCCCTTCATCCAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CCACATATTAGAACGGAAAAGGCAGGCATGCATTTGGCAAAAGATGTAGTTGTTATGAAAACTTGGGTTTaGGTGCGGCCTTGGGTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PHIRTEKAGMHLAKDVVVMKTWV*VRPWVY Trigger: GTAAACCCAAGGCCGCACCAAAACCCAAGTTTTCAT...AACAACTACATCTTTTGCCAAATGCATGCCTGCCTTTTCCGTTCTAATATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGAAAGGCGCCCACGTTATaGTCAGCTCTCTGTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STPSCKESLYLGMKHKTRKAPTL*SALCWF Trigger: GAACCAACAGAGAGCTGACAATAACGTGGGCGCCTT...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTAAGGCGCCCACGTTATaGTCAGCTCTCTGTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLGNQLNSLLESNLFKAPTL*SALCWF Trigger: GAACCAACAGAGAGCTGACAATAACGTGGGCGCCTT...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTGGCTTTCACTTTGACTaGAAACGCGGTGGAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLGFHFD*KRGGGG Trigger: ACCCCCTCCACCGCGTTTCAAGTCAAAGTGAAAGCC...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCGGCCCATCTCCTTTATaGTTGAAGGCTTTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NQLNSLLESNLFGLGWSRGPSPL*LKAFTL Trigger: CAAAGTGAAAGCCTTCAACAATAAAGGAGATGGGCC...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAATTCACTGGGAGCATCTaGTGCAGAGTTGATGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHERVESIRHIFKLNNLQFTGSI*CRVDDS Trigger: GCTGTCATCAACTCTGCACAAGATGCTCCCAGTGAA...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGATGATCCTTGGTGGTaGGCTAGGAGGGGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLGNQLNSLLESNLFDDPWW*ARRGFS Trigger: AGAAAAGCCCCTCCTAGCCAACCACCAAGGATCATC...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 90 bp | CATGGTGTATATGTCCTTGAACTGCACCACAATATCAGCAGGATATaGCTTTGTTGTTCGTTCAGGAATCGGAATGAGGGGAATAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: HGVYVLELHHNISRI*LCCSFRNRNEGNKL Trigger: AAGTTTATTCCCCTCATTCCGATTCCTGAACGAACAACAAAGCCATATCCTGCTGATATTGTGGTGCAGTTCAAGGACATATACACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | CAACTTGTCAAACATGTAAAGCACCTGTGTATGGTGACCTTCACTCTACAGCCTGATTCATTTCAAAAGTaGGAGCTAAAGCCAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: QLVKHVKHLCMVTFTLQPDSFQK*ELKPGS Trigger: AGATCCTGGCTTTAGCTCCAACTTTTGAAATGAATC...AGGCTGTAGAGTGAAGGTCACCATACACAGGTGCTTTACATGTTTGACAAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAAATGAAAACTTGGGTTTaGGTGCGGCCTTGGGTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VHERVESIRHIFKLNNLQMKTWV*VRPWVY Trigger: GTAAACCCAAGGCCGCACCAAAACCCAAGTTTTCAT...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS TCA 90 bp | AACACTCTAAAGTCACATTTTGGCCCATCATGGTGTATATGTCCTTaGACTGCACCACAATATCAGCAGGATATGGCTTTGTTGTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: NTLKSHFGPSWCICP*TAPQYQQDMALLFV Trigger: AACGAACAACAAAGCCATATCCTGCTGATATTGTGGTGCAGTTCAAGGACATATACACCATGATGGGCCAAAATGTGACTTTAGAGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 90 bp | GTCTGGGTTAGTCACAGTCACTTTCTTCCACTCTTCTCCATCAAATaGCTTAAACGCCACTATGTAACCAAAATTGTTACCGTAATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VWVSHSHFLPLFSIK*LKRHYVTKIVTVMV Trigger: TACCATTACGGTAACAATTTTGGTTACATAGTGGCGTTTAAGCCATTTGATGGAGAAGAGTGGAAGAAAGTGACTGTGACTAACCCAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGATGTTTGTCCGGGTTGTaGATAACAAGGTTTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: STPSCKESLYLGMKHKTRCLSGL*ITRFPP Trigger: CGGAGGAAACCTTGTTATCAACAACCCGGACAAACA...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTCAGAAGACTCGACATTaGCGATGTAGAGATTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLGNQLNSLLESNLFQKTRH*RCRDCR Trigger: ACGGCAATCTCTACATCGCAAATGTCGAGTCTTCTG...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTCCACTCAGGAAACGCTaGAACATAGATTCTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLGNQLNSLLESNLFPLRKR*NIDSCL Trigger: CAGGCAAGAATCTATGTTCAAGCGTTTCCTGAGTGG...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTTCCACCTCAGTGTCATaGATATGCTCTACCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLGNQLNSLLESNLFSTSVS*ICSTHS Trigger: TGAGTGGGTAGAGCATATCAATGACACTGAGGTGGA...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAAGGTTTTGGTGCGGCCTaGGGTTTACATTCAATGATA | + |
|
Preference number: 5 (lower is better) Translates to: VHERVESIRHIFKLNNLQGFGAA*GLHSMI Trigger: TATCATTGAATGTAAACCCAAGGCCGCACCAAAACC...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTGGCTTAGGATGGAGCCGCACAGTGATGTCAGCATaGATTGGGGCCAAAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: NQLNSLLESNLFGLGWSRTVMSA*IGAKII Trigger: AATTATTTTGGCCCCAATCAATGCTGACATCACTGT...GCGGCTCCATCCTAAGCCAAACAAATTAGACTCTAACAAGCTGTTCAACTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTGCAGCACCGTCTGTTTaGATCCTGTTTGAGGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: RLIQETALLEHILHTINIAAPSV*ILFEGM Trigger: CATACCCTCAAACAGGATCAAAACAGACGGTGCTGC...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTTGTTTGTCCGGGTTGTaGATAACAAGGTTTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RLIQETALLEHILHTINICLSGL*ITRFPP Trigger: CGGAGGAAACCTTGTTATCAACAACCCGGACAAACA...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | ATAACAAGGAAAACACAACGTTTGTACAGAAAGCTTACAGAGTGTTCATCTCCCTTCTGTTTGTCCGGGTaGTTGATAACAAGGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ITRKTQRLYRKLTECSSPFCLSG*LITRFP Trigger: AGGAAACCTTGTTATCAACAACCCGGACAAACAGAA...GGGAGATGAACACTCTGTAAGCTTTCTGTACAAACGTTGTGTTTTCCTTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTCCAGCGTCTTTCTGTTaGTCCGGGTTGTTGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLPASFC*SGLLIT Trigger: TGTTATCAACAACCCGGACAAACAGAAAGACGCTGG...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTCAGAAGACTCGACATTaGCGATGTAGAGATTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLQKTRH*RCRDCR Trigger: ACGGCAATCTCTACATCGCAAATGTCGAGTCTTCTG...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | TCTACACCTTCTTGTAAAGAGAGTTTATACTTAGGCATGAAGCACAAAACCAGACTTGAACATAGATTCTaGCCTGGTGCTTGTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: STPSCKESLYLGMKHKTRLEHRF*PGACPF Trigger: GAAAGGACAAGCACCAGGCAAGAATCTATGTTCAAG...TCTGGTTTTGTGCTTCATGCCTAAGTATAAACTCTCTTTACAAGAAGGTGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAATCAAATCCACTGCTTTaGCTGACTCCATGTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VHERVESIRHIFKLNNLQSNPLL*LTPCFL Trigger: AAGGAAACATGGAGTCAGCAAAAGCAGTGGATTTGA...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGATGTGTTGGGAAATCAGTTGAACAGCTTGTTAGAGTCTAATTTGTTTTTCTGTTTGTCCGGGTaGTTGATAACAAGGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLGNQLNSLLESNLFFCLSG*LITRFP Trigger: AGGAAACCTTGTTATCAACAACCCGGACAAACAGAA...AAACAAATTAGACTCTAACAAGCTGTTCAACTGATTTCCCAACACATCACGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTCTTGAACATAGATTCTaGCCTGGTGCTTGTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLIQETALLEHILHTINILEHRF*PGACPF Trigger: GAAAGGACAAGCACCAGGCAAGAATCTATGTTCAAG...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AATTCTGTAGCTTTTTCCAAACCTGCATATGAATTCTTGACTCTACACCTTCTTGGTTTTGGTGCGGCCTaGGGTTTACATTCAATGATA | + |
|
Preference number: 5 (lower is better) Translates to: NSVAFSKPAYEFLTLHLLGFGAA*GLHSMI Trigger: TATCATTGAATGTAAACCCAAGGCCGCACCAAAACC...AAGAAGGTGTAGAGTCAAGAATTCATATGCAGGTTTGGAAAAAGCTACAGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGAGAGAGTTGAGTCTATCCGCCACATATTTAAACTAAACAACCTTCAAACAGTGATGTCAGCATaGATTGGGGCCAAAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: VHERVESIRHIFKLNNLQTVMSA*IGAKII Trigger: AATTATTTTGGCCCCAATCAATGCTGACATCACTGT...TTGAAGGTTGTTTAGTTTAAATATGTGGCGGATAGACTCAACTCTCTCATGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000109.11 ENSMUST00000169825.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAATACAAGAGACTGCATTACTCGAACACATACTACATACAATCAACATTTTCTGTTTGTCCGGGTaGTTGATAACAAGGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLIQETALLEHILHTINIFCLSG*LITRFP Trigger: AGGAAACCTTGTTATCAACAACCCGGACAAACAGAA...AATGTTGATTGTATGTAGTATGTGTTCGAGTAATGCAGTCTCTTGTATTAGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 90 bp | GGCCTCGAACGACAAGGTCAGCGGAAGCCGAGGAATTGTCCACGATaGTCTGCGCCGTGCACGTGTACCGGCCTGCGTGTTTCAGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GLERQGQRKPRNCPR*SAPCTCTGLRVSAA Trigger: CGCAGCTGAAACACGCAGGCCGGTACACGTGCACGGCGCAGACAATCGTGGACAATTCCTCGGCTTCCGCTGACCTTGTCGTTCGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | TGCGCCGTGCACGTGTACCGGCCTGCGTGTTTCAGCTaGGCATTTCGGATGAGCAGTTCCCCATTGGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: CAVHVYRPACFS*AFRMSSSPLAS Trigger: CGACGCCAATGGGGAACTGCTCATCCGAAATGCGCAGCTGAAACACGCAGGCCGGTACACGTGCACGGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | GGGCCTCGAACGACAAGGTCAGCGGAAGCCGAGGAATaGTCCACGATTGTCTGCGCCGTGCACGTGTACCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPRTTRSAEAEE*STIVCAVHVYR Trigger: CCGGTACACGTGCACGGCGCAGACAATCGTGGACAATTCCTCGGCTTCCGCTGACCTTGTCGTTCGAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | CGGAAGCCGAGGAATTGTCCACGATTGTCTGCGCCGTaGACGTGTACCGGCCTGCGTGTTTCAGCTGCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RKPRNCPRLSAP*TCTGLRVSAAH Trigger: ATGCGCAGCTGAAACACGCAGGCCGGTACACGTGCACGGCGCAGACAATCGTGGACAATTCCTCGGCTTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | AGGTCAGCGGAAGCCGAGGAATTGTCCACGATTGTCTaGGCCGTGCACGTGTACCGGCCTGCGTGTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSAEAEELSTIV*AVHVYRPACFS Trigger: GCTGAAACACGCAGGCCGGTACACGTGCACGGCGCAGACAATCGTGGACAATTCCTCGGCTTCCGCTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | CGACAAGGTCAGCGGAAGCCGAGGAATTGTCCACGATaGTCTGCGCCGTGCACGTGTACCGGCCTGCGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RQGQRKPRNCPR*SAPCTCTGLRV Trigger: AACACGCAGGCCGGTACACGTGCACGGCGCAGACAATCGTGGACAATTCCTCGGCTTCCGCTGACCTTGTCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | CTCGACAAAGGCGCCCACGTTATTGTCAGCTCTCTGTaGGTTCCGCCCCCACCGCCTACATCTGAGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LDKGAHVIVSSL*VPPPPPTSEGA Trigger: GGCTCCCTCAGATGTAGGCGGTGGGGGCGGAACCAACAGAGAGCTGACAATAACGTGGGCGCCTTTGTCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | GTCCACGATTGTCTGCGCCGTGCACGTGTACCGGCCTaGGTGTTTCAGCTGCGCATTTCGGATGAGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VHDCLRRARVPA*VFQLRISDEQF Trigger: GAACTGCTCATCCGAAATGCGCAGCTGAAACACGCAGGCCGGTACACGTGCACGGCGCAGACAATCGTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | CCCTACCTCTGTGGGGGCTTCACTGGGAGCATCTTGTaGAGAGTTGATGACAGCTACGAGGCTGTAGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PYLCGGFTGSIL*RVDDSYEAVGP Trigger: GGGCCCTACAGCCTCGTAGCTGTCATCAACTCTGCACAAGATGCTCCCAGTGAAGCCCCCACAGAGGTAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | GACTTGAGACACGACTCCGTCTCCCCCGTCGCTGTGTaGTCGAACCTCGACAACATACTCTCCGTCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DLRHDSVSPVAV*SNLDNILSVSG Trigger: CCCAGAGACGGAGAGTATGTTGTCGAGGTTCGAGCACACAGCGACGGGGGAGACGGAGTCGTGTCTCAAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 72 bp | TCGACAAAGGCGCCCACGTTATTGTCAGCTCTCTGTTaGTTCCGCCCCCACCGCCTACATCTGAGGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: STKAPTLLSALC*FRPHRLHLREP Trigger: TGGCTCCCTCAGATGTAGGCGGTGGGGGCGGAACCAACAGAGAGCTGACAATAACGTGGGCGCCTTTGTCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | CAGCTCTCTGTTGGTTCCGCCCCCACCGCCTACATCTaGGGGAGCCACATTTGGTGCAGCACCGTCTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QLSVGSAPTAYI*GSHIWCSTVCF Trigger: AAAACAGACGGTGCTGCACCAAATGTGGCTCCCTCAGATGTAGGCGGTGGGGGCGGAACCAACAGAGAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | GACCCCTACCTCTGTGGGGGCTTCACTGGGAGCATCTaGTGCAGAGTTGATGACAGCTACGAGGCTGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DPYLCGGFTGSI*CRVDDSYEAVG Trigger: CCCTACAGCCTCGTAGCTGTCATCAACTCTGCACAAGATGCTCCCAGTGAAGCCCCCACAGAGGTAGGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | GTCCGCATCCGGCACTGTTGCAGGCTCCCACTTCAATaGAGTACTGGGTGTCGGGAAGAAGGTTCTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VRIRHCCRLPLQ*STGCREEGSPV Trigger: GACTGGAGAACCTTCTTCCCGACACCCAGTACTTCATTGAAGTGGGAGCCTGCAACAGTGCCGGATGCGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | CTCGAAGACAGCGTGGACACGCCTGAAATTTTGACTTaGGACACGACTCCGTCTCCCCCGTCGCTGTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LEDSVDTPEILT*DTTPSPPSLCA Trigger: AGCACACAGCGACGGGGGAGACGGAGTCGTGTCTCAAGTCAAAATTTCAGGCGTGTCCACGCTGTCTTCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | GTACTCCTGGCTGGTGACCTGAACTCTGTGTGCGGCTaGTTCTTTGTCATGCCCAGCCCAGTACCGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLLAGDLNSVCG*FFVMPSPVPNL Trigger: CAGATTCGGTACTGGGCTGGGCATGACAAAGAAGCAGCCGCACACAGAGTTCAGGTCACCAGCCAGGAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 72 bp | CCGGCACTGTTGCAGGCTCCCACTTCAATGAAGTACTaGGTGTCGGGAAGAAGGTTCTCCAGTCTGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PALLQAPTSMKY*VSGRRFSSLAE Trigger: CTCAGCCAGACTGGAGAACCTTCTTCCCGACACCCAGTACTTCATTGAAGTGGGAGCCTGCAACAGTGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | CAGCCCCTGACGTGCTTATCTCAGCAGTGCTGGGCATaGGTTCTAGCACCTTCCGCCACCGGATATCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QPLTCLSQQCWA*VLAPSATGYQE Trigger: TTCCTGATATCCGGTGGCGGAAGGTGCTAGAACCAATGCCCAGCACTGCTGAGATAAGCACGTCAGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | CGTAATGGTACTCTCTCGACAAAGGCGCCCACGTTATaGTCAGCTCTCTGTTGGTTCCGCCCCCACCGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: RNGTLSTKAPTL*SALCWFRPHRL Trigger: TAGGCGGTGGGGGCGGAACCAACAGAGAGCTGACAATAACGTGGGCGCCTTTGTCGAGAGAGTACCATTACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 90 bp | GTGAAGGTCTCGATCACATCACTGGAAGGTCCGCATCCGGCACTGTaGCAGGCTCCCACTTCAATGAAGTACTGGGTGTCGGGAAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VKVSITSLEGPHPAL*QAPTSMKYWVSGRR Trigger: CCTTCTTCCCGACACCCAGTACTTCATTGAAGTGGGAGCCTGCAACAGTGCCGGATGCGGACCTTCCAGTGATGTGATCGAGACCTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | CTGAGGGAGCCACATTTGGTGCAGCACCGTCTGTTTTaGTCCTGTTTGAGGGTATGCTGGGCTCTCCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LREPHLVQHRLF*SCLRVCWALLS Trigger: GGACAGGAGAGCCCAGCATACCCTCAAACAGGATCAAAACAGACGGTGCTGCACCAAATGTGGCTCCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | CAAGCTGAGGAGACTCGAAGACAGCGTGGACACGCCTaGAATTTTGACTTGAGACACGACTCCGTCTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QAEETRRQRGHA*NFDLRHDSVSP Trigger: GGGGGAGACGGAGTCGTGTCTCAAGTCAAAATTTCAGGCGTGTCCACGCTGTCTTCGAGTCTCCTCAGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | AGTAGACAAGAAAGCCAAGGGAGGGCAGGAGCAAGCTaGGGAGACTCGAAGACAGCGTGGACACGCCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRQESQGRAGAS*GDSKTAWTRLK Trigger: TTTCAGGCGTGTCCACGCTGTCTTCGAGTCTCCTCAGCTTGCTCCTGCCCTCCCTTGGCTTTCTTGTCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | TCGATCACATCACTGGAAGGTCCGCATCCGGCACTGTaGCAGGCTCCCACTTCAATGAAGTACTGGGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SITSLEGPHPAL*QAPTSMKYWVS Trigger: CGACACCCAGTACTTCATTGAAGTGGGAGCCTGCAACAGTGCCGGATGCGGACCTTCCAGTGATGTGATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | TGTAAACTGGAAATGGGCTGGCGCGTGCCCGGCAGTTaGGTGACACTTTTCCTTCCAGTGACTCTTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CKLEMGWRVPGS*VTLFLPVTLLG Trigger: ACCCAGAAGAGTCACTGGAAGGAAAAGTGTCACTCAACTGCCGGGCACGCGCCAGCCCATTTCCAGTTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | GAAGGTTCTCCAGTCTGGCTGAGTACTCCTGGCTGGTaGCCTGAACTCTGTGTGCGGCTGCTTCTTTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: EGSPVWLSTPGW*PELCVRLLLCH Trigger: ATGACAAAGAAGCAGCCGCACACAGAGTTCAGGTCACCAGCCAGGAGTACTCAGCCAGACTGGAGAACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | TGCCTCCGTGCTCCTGACCATTCCGTAGTTGTTGGATaGCAGGCAGTAGTACACCCCAGCGTCTTTCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CLRAPDHSVVVG*QAVVHPSVFLF Trigger: AAACAGAAAGACGCTGGGGTGTACTACTGCCTGGCATCCAACAACTACGGAATGGTCAGGAGCACGGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | GTGAGGTCCAAGGCAGGATCGAAAGACGCAGCACACTaGATGGTGGCATTTTCCCCAACAGTGATGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VRSKAGSKDAAH*MVAFSPTVMSA Trigger: TGCTGACATCACTGTTGGGGAAAATGCCACCATGCAGTGTGCTGCGTCTTTCGATCCTGCCTTGGACCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | TCTGAGGGAGCCACATTTGGTGCAGCACCGTCTGTTTaGATCCTGTTTGAGGGTATGCTGGGCTCTCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SEGATFGAAPSV*ILFEGMLGSPV Trigger: GACAGGAGAGCCCAGCATACCCTCAAACAGGATCAAAACAGACGGTGCTGCACCAAATGTGGCTCCCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | CTCTGGGGATGGGGACTTCTATGGAGTGTTTATGGGTaGAGAACAGCTTGCCGTCATGTTGGCCATCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LWGWGLLWSVYG*RTACRHVGHPV Trigger: GACCGGATGGCCAACATGACGGCAAGCTGTTCTCAACCCATAAACACTCCATAGAAGTCCCCATCCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 90 bp | AATTGTTACCGTAATGGTACTCTCTCGACAAAGGCGCCCACGTTATaGTCAGCTCTCTGTTGGTTCCGCCCCCACCGCCTACATCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NCYRNGTLSTKAPTL*SALCWFRPHRLHLR Trigger: CCTCAGATGTAGGCGGTGGGGGCGGAACCAACAGAGAGCTGACAATAACGTGGGCGCCTTTGTCGAGAGAGTACCATTACGGTAACAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | GCTGCTGTTAACGAGCCACTCCGTCCCTTTGCTCCATaGAAACTTGGGTTTTGGTGCGGCCTTGGGTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: AAVNEPLRPFAP*KLGFWCGLGFT Trigger: TGTAAACCCAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCAAAGGGACGGAGTGGCTCGTTAACAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CAA 90 bp | ACTCTCCGTCTCTGGGGATGGGGACTTCTATGGAGTGTTTATGGGTaGAGAACAGCTTGCCGTCATGTTGGCCATCCGGTCTATAGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: TLRLWGWGLLWSVYG*RTACRHVGHPVYRV Trigger: TACTCTATAGACCGGATGGCCAACATGACGGCAAGCTGTTCTCAACCCATAAACACTCCATAGAAGTCCCCATCCCCAGAGACGGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 72 bp | CATGGTCTCATCTTTGTGGACGTAGCGGCCAGTGTCTaGGTTAGTCACAGTCACTTTCTTCCACTCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HGLIFVDVAASV*VSHSHFLPLFS Trigger: GGAGAAGAGTGGAAGAAAGTGACTGTGACTAACCCAGACACTGGCCGCTACGTCCACAAAGATGAGACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CCA 72 bp | TGTGTGCTCGAACCTCGACAACATACTCTCCGTCTCTaGGGATGGGGACTTCTATGGAGTGTTTATGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CVLEPRQHTLRL*GWGLLWSVYGL Trigger: CAACCCATAAACACTCCATAGAAGTCCCCATCCCCAGAGACGGAGAGTATGTTGTCGAGGTTCGAGCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CAA 90 bp | CACTCCGTCCCTTTGCTCCATGAAAACTTGGGTTTTGGTGCGGCCTaGGGTTTACATTCAATGATAACCCTTCCACCTTTCGCAGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HSVPLLHENLGFGAA*GLHSMITLPPFAAK Trigger: CTTGGCTGCGAAAGGTGGAAGGGTTATCATTGAATGTAAACCCAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCAAAGGGACGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CAA 90 bp | GCTGTAGGGCCCATCTCCTTTATTGTTGAAGGCTTTCACTTTGACTaGAAACGCGGTGGAGGGGGTCATGGTCTCATCTTTGTGGACGTA | + |
|
Preference number: 6 (lower is better) Translates to: AVGPISFIVEGFHFD*KRGGGGHGLIFVDV Trigger: TACGTCCACAAAGATGAGACCATGACCCCCTCCACCGCGTTTCAAGTCAAAGTGAAAGCCTTCAACAATAAAGGAGATGGGCCCTACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS TCA 72 bp | TCCAATGGACAGATATCTCAGAGGATGATAACACTTTaGCCCCTACCTCTGTGGGGGCTTCACTGGGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SNGQISQRMITL*PLPLWGLHWEH Trigger: ATGCTCCCAGTGAAGCCCCCACAGAGGTAGGGGTCAAAGTGTTATCATCCTCTGAGATATCTGTCCATTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CCA 72 bp | CAACATACTCTCCGTCTCTGGGGATGGGGACTTCTATaGAGTGTTTATGGGTTGAGAACAGCTTGCCGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QHTLRLWGWGLL*SVYGLRTACRH Trigger: ATGACGGCAAGCTGTTCTCAACCCATAAACACTCCATAGAAGTCCCCATCCCCAGAGACGGAGAGTATGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CCA 72 bp | CTCGAACCTCGACAACATACTCTCCGTCTCTGGGGATaGGGACTTCTATGGAGTGTTTATGGGTTGAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: LEPRQHTLRLWG*GLLWSVYGLRT Trigger: TGTTCTCAACCCATAAACACTCCATAGAAGTCCCCATCCCCAGAGACGGAGAGTATGTTGTCGAGGTTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | TTCCAATGGACAGATATCTCAGAGGATGATAACACTTaGACCCCTACCTCTGTGGGGGCTTCACTGGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FQWTDISEDDNT*TPTSVGASLGA Trigger: TGCTCCCAGTGAAGCCCCCACAGAGGTAGGGGTCAAAGTGTTATCATCCTCTGAGATATCTGTCCATTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CAA 90 bp | GTCCACCTCAGTGTCATTGATATGCTCTACCCACTCAGGAAACGCTaGAACATAGATTCTTGCCTGGTGCTTGTCCTTTCCCCGGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: VHLSVIDMLYPLRKR*NIDSCLVLVLSPDV Trigger: AACATCCGGGGAAAGGACAAGCACCAGGCAAGAATCTATGTTCAAGCGTTTCCTGAGTGGGTAGAGCATATCAATGACACTGAGGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CAA 90 bp | CTGCTGCTGTTAACGAGCCACTCCGTCCCTTTGCTCCATGAAAACTaGGGTTTTGGTGCGGCCTTGGGTTTACATTCAATGATAACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLLTSHSVPLLHEN*GFGAALGLHSMITL Trigger: AAGGGTTATCATTGAATGTAAACCCAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCAAAGGGACGGAGTGGCTCGTTAACAGCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CAA 90 bp | AACACATGCTTCCAATGGACAGATATCTCAGAGGATGATAACACTTaGACCCCTACCTCTGTGGGGGCTTCACTGGGAGCATCTTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: NTCFQWTDISEDDNT*TPTSVGASLGASCA Trigger: TGCACAAGATGCTCCCAGTGAAGCCCCCACAGAGGTAGGGGTCAAAGTGTTATCATCCTCTGAGATATCTGTCCATTGGAAGCATGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | GCAGGAGTAGTTGCCTCTGTCAGAAGACTCGACATTTaGGATGTAGAGATTGCCGTTGGTCTGAGACACAAA | + |
|
Preference number: 6 (lower is better) Translates to: AGVVASVRRLDI*DVEIAVGLRHK Trigger: TTTGTGTCTCAGACCAACGGCAATCTCTACATCGCAAATGTCGAGTCTTCTGACAGAGGCAACTACTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | AGCAGGAGTAGTTGCCTCTGTCAGAAGACTCGACATTaGCGATGTAGAGATTGCCGTTGGTCTGAGACACAA | + |
|
Preference number: 6 (lower is better) Translates to: SRSSCLCQKTRH*RCRDCRWSETQ Trigger: TTGTGTCTCAGACCAACGGCAATCTCTACATCGCAAATGTCGAGTCTTCTGACAGAGGCAACTACTCCTGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | TTAACGAGCCACTCCGTCCCTTTGCTCCATGAAAACTaGGGTTTTGGTGCGGCCTTGGGTTTACATTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LTSHSVPLLHEN*GFGAALGLHSM Trigger: CATTGAATGTAAACCCAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCAAAGGGACGGAGTGGCTCGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 90 bp | TGGACACAAAGCAGGAGTAGTTGCCTCTGTCAGAAGACTCGACATTaGCGATGTAGAGATTGCCGTTGGTCTGAGACACAAATCTTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: WTQSRSSCLCQKTRH*RCRDCRWSETQIFA Trigger: AGCGAAGATTTGTGTCTCAGACCAACGGCAATCTCTACATCGCAAATGTCGAGTCTTCTGACAGAGGCAACTACTCCTGCTTTGTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | GGACTTCTATGGAGTGTTTATGGGTTGAGAACAGCTTaGCGTCATGTTGGCCATCCGGTCTATAGAGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: GLLWSVYGLRTA*RHVGHPVYRVS Trigger: AGATACTCTATAGACCGGATGGCCAACATGACGGCAAGCTGTTCTCAACCCATAAACACTCCATAGAAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 72 bp | GGGTTCCCTAGAGCGAAACACTCTAAAGTCACATTTTaGCCCATCATGGTGTATATGTCCTTGAACTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GFPRAKHSKVTF*PIMVYMSLNCT Trigger: GGTGCAGTTCAAGGACATATACACCATGATGGGCCAAAATGTGACTTTAGAGTGTTTCGCTCTAGGGAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | CCCATCTCCTTTATTGTTGAAGGCTTTCACTTTGACTaGAAACGCGGTGGAGGGGGTCATGGTCTCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PISFIVEGFHFD*KRGGGGHGLIF Trigger: AAAGATGAGACCATGACCCCCTCCACCGCGTTTCAAGTCAAAGTGAAAGCCTTCAACAATAAAGGAGATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | GATTCATTTCAAAAGTTGGAGCTAAAGCCAGGATCTTaGGCTCAGCGTTGGCATAAATGGACCCATACGCGT | + |
|
Preference number: 6 (lower is better) Translates to: DSFQKLELKPGS*AQRWHKWTHTR Trigger: ACGCGTATGGGTCCATTTATGCCAACGCTGAGCTCAAGATCCTGGCTTTAGCTCCAACTTTTGAAATGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | GATTGGGGGATCTGTCTTCGCATCTTTCCAGTCATCTaGGAGAATCGTCTTGGTCTGGATCGTGTATTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: DWGICLRIFPVI*ENRLGLDRVFR Trigger: TCTAAATACACGATCCAGACCAAGACGATTCTCTCAGATGACTGGAAAGATGCGAAGACAGATCCCCCAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS GCA 72 bp | CTCTGTCAGAAGACTCGACATTTGCGATGTAGAGATTaGCGTTGGTCTGAGACACAAATCTTCGCTTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCQKTRHLRCRD*RWSETQIFAYP Trigger: TGGATAAGCGAAGATTTGTGTCTCAGACCAACGGCAATCTCTACATCGCAAATGTCGAGTCTTCTGACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CCA 72 bp | TATGTCCTTGAACTGCACCACAATATCAGCAGGATATaGCTTTGTTGTTCGTTCAGGAATCGGAATGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: YVLELHHNISRI*LCCSFRNRNEG Trigger: CCCCTCATTCCGATTCCTGAACGAACAACAAAGCCATATCCTGCTGATATTGTGGTGCAGTTCAAGGACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | AGTGTCATTGATATGCTCTACCCACTCAGGAAACGCTaGAACATAGATTCTTGCCTGGTGCTTGTCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVIDMLYPLRKR*NIDSCLVLVLS Trigger: GGAAAGGACAAGCACCAGGCAAGAATCTATGTTCAAGCGTTTCCTGAGTGGGTAGAGCATATCAATGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS CAA 72 bp | CCTTTGCTCCATGAAAACTTGGGTTTTGGTGCGGCCTaGGGTTTACATTCAATGATAACCCTTCCACCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLLHENLGFGAA*GLHSMITLPPF Trigger: GAAAGGTGGAAGGGTTATCATTGAATGTAAACCCAAGGCCGCACCAAAACCCAAGTTTTCATGGAGCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | CCTGTCACAGTAGATTCATTGGATAGTGCCACAACGTaGTCCCATGTGATTATATATCGTGAGCCAGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVTVDSLDSATT*SHVIIYREPDL Trigger: GAGATCTGGCTCACGATATATAATCACATGGGATCACGTTGTGGCACTATCCAATGAATCTACTGTGACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
||
| CDS TCA 72 bp | AAGTCACATTTTGGCCCATCATGGTGTATATGTCCTTaGACTGCACCACAATATCAGCAGGATATGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KSHFGPSWCICP*TAPQYQQDMAL Trigger: CAAAGCCATATCCTGCTGATATTGTGGTGCAGTTCAAGGACATATACACCATGATGGGCCAAAATGTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CAA 72 bp | AAAGTCACATTTTGGCCCATCATGGTGTATATGTCCTaGAACTGCACCACAATATCAGCAGGATATGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: KVTFWPIMVYMS*NCTTISAGYGF Trigger: AAAGCCATATCCTGCTGATATTGTGGTGCAGTTCAAGGACATATACACCATGATGGGCCAAAATGTGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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| CDS CAA 90 bp | AAACACTCTAAAGTCACATTTTGGCCCATCATGGTGTATATGTCCTaGAACTGCACCACAATATCAGCAGGATATGGCTTTGTTGTTCGT | + |
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Preference number: 6 (lower is better) Translates to: KHSKVTFWPIMVYMS*NCTTISAGYGFVVR Trigger: ACGAACAACAAAGCCATATCCTGCTGATATTGTGGTGCAGTTCAAGGACATATACACCATGATGGGCCAAAATGTGACTTTAGAGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000109.11 ENSMUST00000068378.6 ENSMUST00000169825.8 |
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