Pregenerated sensors for CNTD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078653Ensembl transcript IDs: ENSMUST00000103107.5
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATTTAGCCCCAGCACTGAGAGGCAGAGAGAGGCAAGTGACCCTCTaGATTTCAGCCCAGCCTGGTGTGTATAGTGAGTTGCAAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: YLAPALRGRERQVTL*ISAQPGVYSELQGS Trigger: GCTGCCTTGCAACTCACTATACACACCAGGCTGGGCTGAAATTCAGAGGGTCACTTGCCTCTCTCTGCCTCTCAGTGCTGGGGCTAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR GCA 90 bp | GGCACACAGTTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTaGAAGTTTAACTCCGTCCTCACTTGTAGCATTGAATGCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GTQLGDVGKGHRVRS*KFNSVLTCSIECLL Trigger: CAGGAGGCATTCAATGCTACAAGTGAGGACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAACTGTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCGCAGAGAGAGGCAAGTaGCCCTCTGAATTTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVAERGK*PSEFQP Trigger: GGGCTGAAATTCAGAGGGTCACTTGCCTCTCTCTGC...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCCGTGTGTATAGTGAGTTaGAAGGCAGCCAGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: WVMWGKDTGSGVASLTPSVCIVS*KAARAE Trigger: CTCAGCCCTGGCTGCCTTGCAACTCACTATACACAC...GGACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR-3UTR CCA 90 bp | GCCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTCACAGTTGGGTGATGTaGGGAAAGGACACCGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: AMYSKEPCHSFDSAPCILHSWVM*GKDTGS Trigger: TGACCCGGTGTCCTTTCCCCACATCACCCAACTGTG...AAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCAGTGGGACTACAGAATaGTGTTTGATACTGTGTGCG | + |
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Preference number: 2 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVSGTTE*CLILCA Trigger: CGCACACAGTATCAAACAGCATTCTGTAGTCCCACT...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCCTGTTTGATACTGTGTaGGACGTGGAGAGATTTAAT | + |
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Preference number: 2 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVLFDTV*DVERFN Trigger: ATTAAATCTCTCCACGTCGCACACAGTATCAAACAG...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCAAAGAGAAAAACAAATaGTGGTATTTAGCCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVKEKNK*WYLAPA Trigger: TGCTGGGGCTAAATACCATCATTTGTTTTTCTCTTT...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR CAA 90 bp | AGTTTCCAGAGTACGCCATGTATAGCAAAGAACCCTGCCATAGTTTaGACTCAGCCCCATGCATCCTTTCCCTCTTTCCTGAAAACAACT | + |
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Preference number: 2 (lower is better) Translates to: SFQSTPCIAKNPAIV*TQPHASFPSFLKTT Trigger: AGTTGTTTTCAGGAAAGAGGGAAAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGGCGTACTCTGGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR-3UTR CCA 90 bp | GCCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTATACTGTGTGCGACGTaGAGAGATTTAATTATTTGT | + |
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Preference number: 2 (lower is better) Translates to: AMYSKEPCHSFDSAPCILILCAT*RDLIIC Trigger: ACAAATAATTAAATCTCTCCACGTCGCACACAGTAT...AAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR-3UTR CAA 90 bp | CCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTTGCTTGTGGCACACAGTaGGGTGATGTGGGGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: PCIAKNPAIVLTQPHASFACGTQ*GDVGKG Trigger: TCCTTTCCCCACATCACCCAACTGTGTGCCACAAGC...AAAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR GCA 72 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTaGAAGTTTAACTCCGTCCTCACTTGTAGCATTGAA | + |
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Preference number: 3 (lower is better) Translates to: LGDVGKGHRVRS*KFNSVLTCSIE Trigger: TTCAATGCTACAAGTGAGGACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR TCA 90 bp | GCCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTCGATCCGGGTCTCCCTaGAGCTGCCCGTCCGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: AMYSKEPCHSFDSAPCILRSGSP*SCPSVP Trigger: CGGGACGGACGGGCAGCTTCAGGGAGACCCGGATCG...AAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCGCTCTGGCTGCCTTGTaGGGAACAGGCTGCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVALAAL*GTGCCG Trigger: GCCACAGCAGCCTGTTCCCCACAAGGCAGCCAGAGC...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCCCTCAGAGCTCTGGCTaGCTTGTGGGGAACAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVPQSSG*LVGNRL Trigger: CAGCCTGTTCCCCACAAGGCAGCCAGAGCTCTGAGG...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR TCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCCCGAGGCAATGCCAGTaGTGCTCTGCAAGTGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVPRQCQ*CSASAL Trigger: TAGGGCACTTGCAGAGCATCACTGGCATTGCCTCGG...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCGAGCATCTCCACATATaGCAGAGGAGTGGGCAGATT | + |
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Preference number: 4 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVEHLHI*QRSGQI Trigger: AATCTGCCCACTCCTCTGGCATATGTGGAGATGCTC...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CCA 90 bp | CCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTTGGGAACAGGCTGCTGTaGCCCAGGAGTGTTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PCIAKNPAIVLTQPHASFGNRLL*PRSVCS Trigger: GGAGCAAACACTCCTGGGCCACAGCAGCCTGTTCCC...AAAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR TCA 90 bp | GCCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTAGTTTGCTGGCCAGCTaGACACACGACACCAATCGG | + |
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Preference number: 4 (lower is better) Translates to: AMYSKEPCHSFDSAPCILSLLAS*THDTNR Trigger: CCGATTGGTGTCGTGTGTTCAGCTGGCCAGCAAACT...AAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCAAGAGAACTCAGCAATaGTTTCCGAGGCAATGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVKRTQQ*FPRQCQ Trigger: CTGGCATTGCCTCGGAAAGCATTGCTGAGTTCTCTT...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CCA 90 bp | GCCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTTACAGTTCACCAGCCTaGGCCTCAAGGGTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: AMYSKEPCHSFDSAPCILYSSPA*ASRVLP Trigger: TGGAAGGACCCTTGAGGCCCAGGCTGGTGAACTGTA...AAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCTGGCTCCAGCATTCATaGTTTTGGATGAAGGCACTC | + |
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Preference number: 4 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVWLQHS*FWMKAL Trigger: GAGTGCCTTCATCCAAAACCATGAATGCTGGAGCCA...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR TCA 90 bp | TGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCCCTGCCTGCTTCAGCATaGATCTTTCTAGGATTTCTA | + |
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Preference number: 4 (lower is better) Translates to: WVMWGKDTGSGVASLTPSLPASA*IFLGFL Trigger: TAGAAATCCTAGAAAGATTCATGCTGAAGCAGGCAG...GGACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | CCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTTTTGTGGGGAACAGGCTaGTGTGGCCCAGGAGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PCIAKNPAIVLTQPHASFLWGTG*CGPGVF Trigger: AAACACTCCTGGGCCACAGCAGCCTGTTCCCCACAA...AAAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCAAGTGCCCTATAACCTaGCTCCAGCATTCATGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVKCPIT*LQHSWF Trigger: AAACCATGAATGCTGGAGCCAGGTTATAGGGCACTT...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CCA 90 bp | TCTAGTGGGACTACAGAATGCTGTTTGATACTGTGTGCGACGTGGAGAGATTTACAGTCCTCAGAGCTCTaGCTGCCTTGTGGGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: SSGTTECCLILCATWRDLQSSEL*LPCGEQ Trigger: CTGTTCCCCACAAGGCAGCCAGAGCTCTGAGGACTG...TAAATCTCTCCACGTCGCACACAGTATCAAACAGCATTCTGTAGTCCCACTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCCGCAATGATTCCAACTaGCAAGAGCATAAAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVRNDSN*QEHKVF Trigger: GAAGACTTTATGCTCTTGGCAGTTGGAATCATTGCG...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CCA 90 bp | TGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCCATAGGCTCTCATAGATaGGTTCATGCAGAAGATAGA | + |
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Preference number: 4 (lower is better) Translates to: WVMWGKDTGSGVASLTPSIGSHR*VHAEDR Trigger: TCTATCTTCTGCATGAACCCATCTATGAGAGCCTAT...GGACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR CAA 72 bp | AGTACGCCATGTATAGCAAAGAACCCTGCCATAGTTTaGACTCAGCCCCATGCATCCTTTCCCTCTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: STPCIAKNPAIV*TQPHASFPSFL Trigger: CAGGAAAGAGGGAAAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGGCGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR TCA 90 bp | TCTAGTGGGACTACAGAATGCTGTTTGATACTGTGTGCGACGTGGAGAGATTTATTCTGCTGGGCCAAGTaGAGCAGGGCGTTTTCGATA | + |
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Preference number: 4 (lower is better) Translates to: SSGTTECCLILCATWRDLFCWAK*SRAFSI Trigger: TATCGAAAACGCCCTGCTTCACTTGGCCCAGCAGAA...TAAATCTCTCCACGTCGCACACAGTATCAAACAGCATTCTGTAGTCCCACTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | TCTAGTGGGACTACAGAATGCTGTTTGATACTGTGTGCGACGTGGAGAGATTTAGTGATGCTCTGCAAGTaGCCTATAACCTGGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSGTTECCLILCATWRDLVMLCK*PITWLQ Trigger: CTGGAGCCAGGTTATAGGGCACTTGCAGAGCATCAC...TAAATCTCTCCACGTCGCACACAGTATCAAACAGCATTCTGTAGTCCCACTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | GCCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTCAGATGTCCTCTGCCTaGTTCAGCATGAATCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: AMYSKEPCHSFDSAPCILQMSSA*FSMNLS Trigger: AGAAAGATTCATGCTGAAGCAGGCAGAGGACATCTG...AAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | TCTAGTGGGACTACAGAATGCTGTTTGATACTGTGTGCGACGTGGAGAGATTTAATAGCCCTCCAGCTCTaGAGCTCTGTGTCTTTACCT | + |
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Preference number: 4 (lower is better) Translates to: SSGTTECCLILCATWRDLIALQL*SSVSLP Trigger: AGGTAAAGACACAGAGCTGCAGAGCTGGAGGGCTAT...TAAATCTCTCCACGTCGCACACAGTATCAAACAGCATTCTGTAGTCCCACTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | TCTAGTGGGACTACAGAATGCTGTTTGATACTGTGTGCGACGTGGAGAGATTTAAGTGGAAAGACAGTTTaGTGGCCAGCTGAACACACG | + |
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Preference number: 4 (lower is better) Translates to: SSGTTECCLILCATWRDLSGKTV*WPAEHT Trigger: CGTGTGTTCAGCTGGCCAGCAAACTGTCTTTCCACT...TAAATCTCTCCACGTCGCACACAGTATCAAACAGCATTCTGTAGTCCCACTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | GCCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTGCTGTGAGTCAGGATTaGGTAAGAGAACTCAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: AMYSKEPCHSFDSAPCILAVSQD*VRELSN Trigger: ATTGCTGAGTTCTCTTACGCAATCCTGACTCACAGC...AAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | CCATGTATAGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTTAACTTGTTGACAAGCTaGTCTTTCATAGCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PCIAKNPAIVLTQPHASFNLLTS*SFIALQ Trigger: CTGGAGGGCTATGAAAGAGCAGCTTGTCAACAAGTT...AAAGGATGCATGGGGCTGAGTCAAAACTATGGCAGGGTTCTTTGCTATACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| 3UTR CAA 72 bp | CCTCCTGTGCTGTCTAGTGGGACTACAGAATGCTGTTaGATACTGTGTGCGACGTGGAGAGATTTAATTATT | + |
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Preference number: 4 (lower is better) Translates to: PPVLSSGTTECC*ILCATWRDLII Trigger: AATAATTAAATCTCTCCACGTCGCACACAGTATCAAACAGCATTCTGTAGTCCCACTAGACAGCACAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR TCA 90 bp | TCTAGTGGGACTACAGAATGCTGTTTGATACTGTGTGCGACGTGGAGAGATTTACAAAATATCGAGCTCTaGCTCCAGCAGTTCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SSGTTECCLILCATWRDLQNIEL*LQQFFF Trigger: AAAGAAGAACTGCTGGAGTCAGAGCTCGATATTTTG...TAAATCTCTCCACGTCGCACACAGTATCAAACAGCATTCTGTAGTCCCACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAGGTTACTTCAAAGAGATTCAGTCAAGGTCATCGAAAATGCTCTAAACCGACAGATGTCCTCTaGCTGCTTCAGCATGAATCT | + |
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Preference number: 4 (lower is better) Translates to: ERKVTSKRFSQGHRKCSKPTDVL*LLQHES Trigger: AGATTCATGCTGAAGCAGGCAGAGGACATCTGTCGG...TTTAGAGCATTTTCGATGACCTTGACTGAATCTCTTTGAAGTAACCTTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAGGTTACTTCAAAGAGATTCAGTCAAGGTCATCGAAAATGCTCTAAAATGCCAGTGATGCTCTaGAAGTGCCCTATAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: ERKVTSKRFSQGHRKCSKMPVML*KCPITW Trigger: CCAGGTTATAGGGCACTTGCAGAGCATCACTGGCAT...TTTAGAGCATTTTCGATGACCTTGACTGAATCTCTTTGAAGTAACCTTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CCA 90 bp | GAAAGAAAGGTTACTTCAAAGAGATTCAGTCAAGGTCATCGAAAATGCTCTAAAGGAAAGACAGTTTGCTaGCCAGCTGAACACACGACA | + |
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Preference number: 4 (lower is better) Translates to: ERKVTSKRFSQGHRKCSKGKTVC*PAEHTT Trigger: TGTCGTGTGTTCAGCTGGCCAGCAAACTGTCTTTCC...TTTAGAGCATTTTCGATGACCTTGACTGAATCTCTTTGAAGTAACCTTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGGTTACTTCAAAGAGATTCAGTCAAGGTCATCGAAAATGCTCTAAAGTAACCACTCCGAACTaGAAGTCACTACAGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: ERKVTSKRFSQGHRKCSKVTTPN*KSLQFT Trigger: GGTGAACTGTAGTGACTTTCAGTTCGGAGTGGTTAC...TTTAGAGCATTTTCGATGACCTTGACTGAATCTCTTTGAAGTAACCTTTCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS TCA 90 bp | CGTCCCGCAGCCTCCTTCACGGCTTGCTCGTTCTGCTGGGCCAAGTaGAGCAGGGCGTTTTCGATAGTCTCTGTGGTAACCACTCCGAAC | + |
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Preference number: 5 (lower is better) Translates to: RPAASFTACSFCWAK*SRAFSIVSVVTTPN Trigger: GTTCGGAGTGGTTACCACAGAGACTATCGAAAACGCCCTGCTTCACTTGGCCCAGCAGAACGAGCAAGCCGTGAAGGAGGCTGCGGGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CAA 90 bp | TGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCCGTGGCCCAGGAGTGTTaGCTCCCACGCTGTGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: WVMWGKDTGSGVASLTPSVAQEC*LPRCES Trigger: TGACTCACAGCGTGGGAGCAAACACTCCTGGGCCAC...GGACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS GCA 90 bp | CTGCTGTGGCCCAGGAGTGTTTGCTCCCACGCTGTGAGTCAGGATTaGGTAAGAGAACTCAGCAATGCTTTCCGAGGCAATGCCAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: LLWPRSVCSHAVSQD*VRELSNAFRGNASD Trigger: ATCACTGGCATTGCCTCGGAAAGCATTGCTGAGTTCTCTTACGCAATCCTGACTCACAGCGTGGGAGCAAACACTCCTGGGCCACAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CCA 90 bp | GATAGACCAGGTCGAGGAGGGTCAGACAAGTTGCATGTAGTTGTGTaGCAGGGACCAAACAGCCATTGTACCCTAGGACTTCAAGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: DRPGRGGSDKLHVVV*QGPNSHCTLGLQGA Trigger: TGCTCCTTGAAGTCCTAGGGTACAATGGCTGTTTGGTCCCTGCCACACAACTACATGCAACTTGTCTGACCCTCCTCGACCTGGTCTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CCA 90 bp | ATGCTCTGCAAGTGCCCTATAACCTGGCTCCAGCATTCATGGTTTTaGATGAAGGCACTCGCCGCAATGATTCCAACTGCCAAGAGCATA | + |
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Preference number: 5 (lower is better) Translates to: MLCKCPITWLQHSWF*MKALAAMIPTAKSI Trigger: TATGCTCTTGGCAGTTGGAATCATTGCGGCGAGTGCCTTCATCCAAAACCATGAATGCTGGAGCCAGGTTATAGGGCACTTGCAGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CAA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCCGGAGGATGAACTTGTaGACAAGCTGCTCTTTCATA | + |
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Preference number: 5 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVRRMNL*TSCSFI Trigger: TATGAAAGAGCAGCTTGTCAACAAGTTCATCCTCCG...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CAA 90 bp | TTGGGTGATGTGGGGAAAGGACACCGGGTCAGGAGTTGCAAGTTTAACTCCGTCAATCGGAGGATGAACTaGTTGACAAGCTGCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LGDVGKGHRVRSCKFNSVNRRMN*LTSCSF Trigger: GAAAGAGCAGCTTGTCAACAAGTTCATCCTCCGATT...GACGGAGTTAAACTTGCAACTCCTGACCCGGTGTCCTTTCCCCACATCACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS GCA 90 bp | GCATTCATGGTTTTGGATGAAGGCACTCGCCGCAATGATTCCAACTaGCAAGAGCATAAAGTCTTCCTTCACAGAGAGAAACTTTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: AFMVLDEGTRRNDSN*QEHKVFLHREKLFP Trigger: GGGGAAAAGTTTCTCTCTGTGAAGGAAGACTTTATGCTCTTGGCAGTTGGAATCATTGCGGCGAGTGCCTTCATCCAAAACCATGAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS TCA 90 bp | GGGCAGATTTATTTGGAAGTTCAGGGACTTCAAAATATCGAGCTCTaGCTCCAGCAGTTCTTCTTTGGTGTGTACATAACCCAGAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GQIYLEVQGLQNIEL*LQQFFFGVYITQSL Trigger: CAGGCTCTGGGTTATGTACACACCAAAGAAGAACTGCTGGAGTCAGAGCTCGATATTTTGAAGTCCCTGAACTTCCAAATAAATCTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAGGTTACTTCAAAGAGATTCAGTCAAGGTCATCGAAAATGCTCTAAAAGCCTCCTTCACGGCTaGCTCGTTCTGCTGGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: ERKVTSKRFSQGHRKCSKSLLHG*LVLLGQ Trigger: TTGGCCCAGCAGAACGAGCAAGCCGTGAAGGAGGCT...TTTAGAGCATTTTCGATGACCTTGACTGAATCTCTTTGAAGTAACCTTTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAGGTTACTTCAAAGAGATTCAGTCAAGGTCATCGAAAATGCTCTAAACGCTGTGAGTCAGGATaGCGTAAGAGAACTCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: ERKVTSKRFSQGHRKCSKRCESG*RKRTQQ Trigger: TTGCTGAGTTCTCTTACGCAATCCTGACTCACAGCG...TTTAGAGCATTTTCGATGACCTTGACTGAATCTCTTTGAAGTAACCTTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CAA 72 bp | GAAGCTGCCCGTCCGTCCCGCAGCCTCCTTCACGGCTaGCTCGTTCTGCTGGGCCAAGTGAAGCAGGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: EAARPSRSLLHG*LVLLGQVKQGV Trigger: AACGCCCTGCTTCACTTGGCCCAGCAGAACGAGCAAGCCGTGAAGGAGGCTGCGGGACGGACGGGCAGCTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CAA 90 bp | GGTCTCCCTGAAGCTGCCCGTCCGTCCCGCAGCCTCCTTCACGGCTaGCTCGTTCTGCTGGGCCAAGTGAAGCAGGGCGTTTTCGATAGT | + |
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Preference number: 6 (lower is better) Translates to: GLPEAARPSRSLLHG*LVLLGQVKQGVFDS Trigger: ACTATCGAAAACGCCCTGCTTCACTTGGCCCAGCAGAACGAGCAAGCCGTGAAGGAGGCTGCGGGACGGACGGGCAGCTTCAGGGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS TCA 72 bp | ACAGGAGAAAAACAAACTCCACGATCCGGGTCTCCCTaGAGCTGCCCGTCCGTCCCGCAGCCTCCTTCACGG | + |
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Preference number: 6 (lower is better) Translates to: TGEKQTPRSGSP*SCPSVPQPPSR Trigger: CCGTGAAGGAGGCTGCGGGACGGACGGGCAGCTTCAGGGAGACCCGGATCGTGGAGTTTGTTTTTCTCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS TCA 72 bp | GCCTCCTTCACGGCTTGCTCGTTCTGCTGGGCCAAGTaGAGCAGGGCGTTTTCGATAGTCTCTGTGGTAACC | + |
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Preference number: 6 (lower is better) Translates to: ASFTACSFCWAK*SRAFSIVSVVT Trigger: GGTTACCACAGAGACTATCGAAAACGCCCTGCTTCACTTGGCCCAGCAGAACGAGCAAGCCGTGAAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS GCA 72 bp | TCAGCAATGCTTTCCGAGGCAATGCCAGTGATGCTCTaGAAGTGCCCTATAACCTGGCTCCAGCATTCATGG | + |
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Preference number: 6 (lower is better) Translates to: SAMLSEAMPVML*KCPITWLQHSW Trigger: CCATGAATGCTGGAGCCAGGTTATAGGGCACTTGCAGAGCATCACTGGCATTGCCTCGGAAAGCATTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CCA 72 bp | GGTCGAGGAGGGTCAGACAAGTTGCATGTAGTTGTGTaGCAGGGACCAAACAGCCATTGTACCCTAGGACTT | + |
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Preference number: 6 (lower is better) Translates to: GRGGSDKLHVVV*QGPNSHCTLGL Trigger: AAGTCCTAGGGTACAATGGCTGTTTGGTCCCTGCCACACAACTACATGCAACTTGTCTGACCCTCCTCGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CAA 72 bp | GCAGAAGATAGACCAGGTCGAGGAGGGTCAGACAAGTaGCATGTAGTTGTGTGGCAGGGACCAAACAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: AEDRPGRGGSDK*HVVVWQGPNSH Trigger: ATGGCTGTTTGGTCCCTGCCACACAACTACATGCAACTTGTCTGACCCTCCTCGACCTGGTCTATCTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CAA 90 bp | GATGCTCTGCAAGTGCCCTATAACCTGGCTCCAGCATTCATGGTTTaGGATGAAGGCACTCGCCGCAATGATTCCAACTGCCAAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: DALQVPYNLAPAFMV*DEGTRRNDSNCQEH Trigger: ATGCTCTTGGCAGTTGGAATCATTGCGGCGAGTGCCTTCATCCAAAACCATGAATGCTGGAGCCAGGTTATAGGGCACTTGCAGAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS TCA 72 bp | GCGTTTTCGATAGTCTCTGTGGTAACCACTCCGAACTaGAAGTCACTACAGTTCACCAGCCTGGGCCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: AFSIVSVVTTPN*KSLQFTSLGLK Trigger: CTTGAGGCCCAGGCTGGTGAACTGTAGTGACTTTCAGTTCGGAGTGGTTACCACAGAGACTATCGAAAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS GCA 72 bp | AGCTGGAGTGTGGCTTGCCGACAGATGTCCTCTGCCTaGTTCAGCATGAATCTTTCTAGGATTTCTACAGCC | + |
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Preference number: 6 (lower is better) Translates to: SWSVACRQMSSA*FSMNLSRISTA Trigger: GGCTGTAGAAATCCTAGAAAGATTCATGCTGAAGCAGGCAGAGGACATCTGTCGGCAAGCCACACTCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CCA 72 bp | AAGTGCCCTATAACCTGGCTCCAGCATTCATGGTTTTaGATGAAGGCACTCGCCGCAATGATTCCAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: KCPITWLQHSWF*MKALAAMIPTA Trigger: GGCAGTTGGAATCATTGCGGCGAGTGCCTTCATCCAAAACCATGAATGCTGGAGCCAGGTTATAGGGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CAA 72 bp | CAAGTGCCCTATAACCTGGCTCCAGCATTCATGGTTTaGGATGAAGGCACTCGCCGCAATGATTCCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: QVPYNLAPAFMV*DEGTRRNDSNC Trigger: GCAGTTGGAATCATTGCGGCGAGTGCCTTCATCCAAAACCATGAATGCTGGAGCCAGGTTATAGGGCACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CCA 72 bp | GGACTTCAAGGAGCATCTCCACATATGCCAGAGGAGTaGGCAGATTTATTTGGAAGTTCAGGGACTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: GLQGASPHMPEE*ADLFGSSGTSK Trigger: TTTTGAAGTCCCTGAACTTCCAAATAAATCTGCCCACTCCTCTGGCATATGTGGAGATGCTCCTTGAAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS CCA 72 bp | AATTCTCAATTGAAGCTCTCAATAGGCTCTCATAGATaGGTTCATGCAGAAGATAGACCAGGTCGAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: NSQLKLSIGSHR*VHAEDRPGRGG Trigger: CCCTCCTCGACCTGGTCTATCTTCTGCATGAACCCATCTATGAGAGCCTATTGAGAGCTTCAATTGAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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| CDS TCA 72 bp | TATTTGGAAGTTCAGGGACTTCAAAATATCGAGCTCTaGCTCCAGCAGTTCTTCTTTGGTGTGTACATAACC | + |
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Preference number: 6 (lower is better) Translates to: YLEVQGLQNIEL*LQQFFFGVYIT Trigger: GGTTATGTACACACCAAAGAAGAACTGCTGGAGTCAGAGCTCGATATTTTGAAGTCCCTGAACTTCCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103107.5 |
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