Pregenerated sensors for CNST (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038949Ensembl transcript IDs: ENSMUST00000040706.9
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAAGTTTCTCTTGAGCTGCGCACAGAGCCCGGCACTCATCTCTTaGGGCAGCATAGAAGCCAGAGTGAACTCTCACCTGGGACCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SKFLLSCAQSPALIS*GSIEARVNSHLGPG Trigger: CCCAGGTCCCAGGTGAGAGTTCACTCTGGCTTCTATGCTGCCTCAAGAGATGAGTGCCGGGCTCTGTGCGCAGCTCAAGAGAAACTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR GCA 90 bp | AAGGAGAGGGGCCTGCTCGCCATAGCTCCCTCTCTCTGTCCTCGGTaGCTACATCTGTGTTCCCTGGGCTGCTGTTTAATGTTGCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: KERGLLAIAPSLCPR*LHLCSLGCCLMLLF Trigger: AAACAGCAACATTAAACAGCAGCCCAGGGAACACAGATGTAGGCACCGAGGACAGAGAGAGGGAGCTATGGCGAGCAGGCCCCTCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR GCA 90 bp | GCTCCCTCTCTCTGTCCTCGGTGCCTACATCTGTGTTCCCTGGGCTaGTGTTTAATGTTGCTGTTTCTAACGTTCATCCTTGGGTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: APSLCPRCLHLCSLG*CLMLLFLTFILGSL Trigger: CAAGGACCCAAGGATGAACGTTAGAAACAGCAACATTAAACAGCAGCCCAGGGAACACAGATGTAGGCACCGAGGACAGAGAGAGGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 90 bp | CCCCGAGTGGTGAGCACCGGCTCCTTGGATACACAACTGGGTCACTaGTTAGCCAGGTATCATTTCAGCCCTTTCTTTTACTGGATTCTC | + |
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Preference number: 1 (lower is better) Translates to: PRVVSTGSLDTQLGH*LARYHFSPFFYWIL Trigger: GAGAATCCAGTAAAAGAAAGGGCTGAAATGATACCTGGCTAACCAGTGACCCAGTTGTGTATCCAAGGAGCCGGTGCTCACCACTCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 90 bp | TTCCCTGGGCTGCTGTTTAATGTTGCTGTTTCTAACGTTCATCCTTaGGTCCTTGATGCCAGGGAGCAGGGATGTCTCATGACTTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: FPGLLFNVAVSNVHP*VLDAREQGCLMTSE Trigger: CTCAGAAGTCATGAGACATCCCTGCTCCCTGGCATCAAGGACCCAAGGATGAACGTTAGAAACAGCAACATTAAACAGCAGCCCAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR GCA 90 bp | ATAAGCAGAGACACAAAGGAAGGTACTGTGCCAGCCAGTAACACCTaGAAAGCCAGTTTTCTCCTTCCTTCCAAACGATCCCGACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: ISRDTKEGTVPASNT*KASFLLPSKRSRQE Trigger: TTCCTGTCGGGATCGTTTGGAAGGAAGGAGAAAACTGGCTTTGCAGGTGTTACTGGCTGGCACAGTACCTTCCTTTGTGTCTCTGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 90 bp | CTGGGTCACTGGTTAGCCAGGTATCATTTCAGCCCTTTCTTTTACTaGATTCTCCCAGGAAACCCAGGGTTTTGGAAATGTGGCCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: LGHWLARYHFSPFFY*ILPGNPGFWKCGQG Trigger: ACCTTGGCCACATTTCCAAAACCCTGGGTTTCCTGGGAGAATCCAGTAAAAGAAAGGGCTGAAATGATACCTGGCTAACCAGTGACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 90 bp | TTTCTTTTACTGGATTCTCCCAGGAAACCCAGGGTTTTGGAAATGTaGCCAAGGTGGCTGAGAGGCAAATACAACATCAGAGATCACACG | + |
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Preference number: 1 (lower is better) Translates to: FLLLDSPRKPRVLEM*PRWLRGKYNIRDHT Trigger: CGTGTGATCTCTGATGTTGTATTTGCCTCTCAGCCACCTTGGCCACATTTCCAAAACCCTGGGTTTCCTGGGAGAATCCAGTAAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCTCGGTGCCTACATCTGTGTTCCCTGGGCTGCTGTTTAATGTTGCTGTTTCATCCTTGGGTCCTTaGTGCCAGGGAGCAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: LSSVPTSVFPGLLFNVAVSSLGP*CQGAGM Trigger: CATCCCTGCTCCCTGGCATCAAGGACCCAAGGATGA...AACAGCAACATTAAACAGCAGCCCAGGGAACACAGATGTAGGCACCGAGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAATACAACATCAGAGATCACACGGGACTCTGAGTGACCGAAAAGAGGTGCTGGCTATCCACTTGTaGTCACTGCTTCAGACCACC | + |
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Preference number: 2 (lower is better) Translates to: RQIQHQRSHGTLSDRKEVLAIHL*SLLQTT Trigger: GGTGGTCTGAAGCAGTGATCACAAGTGGATAGCCAG...CACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR GCA 90 bp | ACACAACTGGGTCACTGGTTAGCCAGGTATCATTTCAGCCCTTTCTTTTACTGGCAAAGGAAGGTACTGTaGCAGCCAGTAACACCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TQLGHWLARYHFSPFFYWQRKVL*QPVTPA Trigger: TGCAGGTGTTACTGGCTGGCACAGTACCTTCCTTTG...CCAGTAAAAGAAAGGGCTGAAATGATACCTGGCTAACCAGTGACCCAGTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR CCA 90 bp | ACACAACTGGGTCACTGGTTAGCCAGGTATCATTTCAGCCCTTTCTTTTACTGGGGGAAGCAATGGCTGTaGAGCAAGACTGTAAACCAG | + |
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Preference number: 2 (lower is better) Translates to: TQLGHWLARYHFSPFFYWGKQWL*SKTVNQ Trigger: CTGGTTTACAGTCTTGCTCCACAGCCATTGCTTCCC...CCAGTAAAAGAAAGGGCTGAAATGATACCTGGCTAACCAGTGACCCAGTTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR GCA 90 bp | ATGACCATTACAGGTTTCAAAGGTACCCTAGGTTTTCTAGGTGAGAGTTCACACGGAGTTCTGTCCCTGTaGCTTTGGGCCTGTCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: MTITGFKGTLGFLGESSHGVLSL*LWACQV Trigger: AACTTGACAGGCCCAAAGGCACAGGGACAGAACTCC...GTGTGAACTCTCACCTAGAAAACCTAGGGTACCTTTGAAACCTGTAATGGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGAAGTTTCTCTTGAGCTaGGCACAGAGCCCGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMKFLLS*AQSPAL Trigger: GAGTGCCGGGCTCTGTGCGCAGCTCAAGAGAAACTT...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTGCAGGGGGATACTCCAATTCATGCAATAAATGACCATTACAGGTTTCAAGCTGTCGGGGAAGTCTaGATCTTCTTTGTCTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: HLQGDTPIHAINDHYRFQAVGEV*IFFVCQ Trigger: CTGACAGACAAAGAAGATGCAGACTTCCCCGACAGC...TTGAAACCTGTAATGGTCATTTATTGCATGAATTGGAGTATCCCCCTGCAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR GCA 90 bp | ACACAACTGGGTCACTGGTTAGCCAGGTATCATTTCAGCCCTTTCTTTTACTGGTTCTCCAAAGAGTTGTaGCTGCACATTGTCGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: TQLGHWLARYHFSPFFYWFSKEL*LHIVVK Trigger: CTTGACGACAATGTGCAGGCACAACTCTTTGGAGAA...CCAGTAAAAGAAAGGGCTGAAATGATACCTGGCTAACCAGTGACCCAGTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGCTGTCCCTGTGCCTTTaGGCCTGTCAAGTTCATCGA | + |
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Preference number: 2 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMLSLCL*ACQVHR Trigger: TCGATGAACTTGACAGGCCCAAAGGCACAGGGACAG...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTTTCTTTTACTGGATTCTCCCAGGAAACCCAGGGTTTTGGAAATGTGGCCTTTGTATTCTATGCTaGCTATCCACTTGTGATCAC | + |
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Preference number: 2 (lower is better) Translates to: SPFFYWILPGNPGFWKCGLCILC*LSTCDH Trigger: GTGATCACAAGTGGATAGCCAGCATAGAATACAAAG...GCCACATTTCCAAAACCCTGGGTTTCCTGGGAGAATCCAGTAAAAGAAAGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAATACAACATCAGAGATCACACGGGACTCTGAGTGACCGAAAAGAGGTGGACAAAGAAACTTATTaGATGATGGTGGGAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: RQIQHQRSHGTLSDRKEVDKETY*MMVGSN Trigger: ATTGCTTCCCACCATCATGCAATAAGTTTCTTTGTC...CACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGACCGCAAATGAGGAATaGCCACCTGGTGACAGAATT | + |
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Preference number: 2 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMTANEE*PPGDRI Trigger: AATTCTGTCACCAGGTGGCCATTCCTCATTTGCGGT...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR GCA 90 bp | GTTGTGCCTGCACATTGTCGTCAAGTTAAAAGAATAAAGGTCATCTTTGTATTCACTGTAAACCAGGAGTaGCCTTTAGCCCTCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VVPAHCRQVKRIKVIFVFTVNQE*PLALSV Trigger: CACACTGAGGGCTAAAGGGCACTCCTGGTTTACAGT...GAATACAAAGATGACCTTTATTCTTTTAACTTGACGACAATGTGCAGGCACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGATACACGTGGTAGTCTaGTTCATTCGTCAGAGTATG | + |
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Preference number: 2 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMIHVVV*FIRQSM Trigger: CATACTCTGACGAATGAAGCAGACTACCACGTGTAT...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGTGCCTGCACATTGTCGTCAAGTTAAAAGAATAAAGGTCATCTTTGTATTCAAGAAACTTATTGCATaGTGGTGGGAAGCAATGGCT | + |
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Preference number: 2 (lower is better) Translates to: VVPAHCRQVKRIKVIFVFKKLIA*WWEAMA Trigger: AGCCATTGCTTCCCACCATCATGCAATAAGTTTCTT...GAATACAAAGATGACCTTTATTCTTTTAACTTGACGACAATGTGCAGGCACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCTTCAGAACTCTAGGTATAAATAGTTGTCAGTACTTTCAAATGAGAGGAACACAACTGGGTCACTaGTTAGCCAGGTATCATTTC | + |
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Preference number: 2 (lower is better) Translates to: QFFRTLGINSCQYFQMRGTQLGH*LARYHF Trigger: GAAATGATACCTGGCTAACCAGTGACCCAGTTGTGT...TCCTCTCATTTGAAAGTACTGACAACTATTTATACCTAGAGTTCTGAAGAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR GCA 72 bp | GGCCTGCTCGCCATAGCTCCCTCTCTCTGTCCTCGGTaGCTACATCTGTGTTCCCTGGGCTGCTGTTTAATG | + |
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Preference number: 3 (lower is better) Translates to: GLLAIAPSLCPR*LHLCSLGCCLM Trigger: CATTAAACAGCAGCCCAGGGAACACAGATGTAGGCACCGAGGACAGAGAGAGGGAGCTATGGCGAGCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR TCA 72 bp | CTCTTGAGCTGCGCACAGAGCCCGGCACTCATCTCTTaGGGCAGCATAGAAGCCAGAGTGAACTCTCACCTG | + |
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Preference number: 3 (lower is better) Translates to: LLSCAQSPALIS*GSIEARVNSHL Trigger: CAGGTGAGAGTTCACTCTGGCTTCTATGCTGCCTCAAGAGATGAGTGCCGGGCTCTGTGCGCAGCTCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 72 bp | CTCACCTGGGACCTGGGAGTTCTGTCCCTGTGCCTTTaGGCCTGTCAAGTTCATCGACACAGGTCTGTCAGT | + |
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Preference number: 3 (lower is better) Translates to: LTWDLGVLSLCL*ACQVHRHRSVS Trigger: ACTGACAGACCTGTGTCGATGAACTTGACAGGCCCAAAGGCACAGGGACAGAACTCCCAGGTCCCAGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR GCA 72 bp | GCGCACGGCCTGAGAGTACGCATACACGTGGTAGTCTaGTTCATTCGTCAGAGTATGGGTTTACCTGCCCTA | + |
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Preference number: 3 (lower is better) Translates to: AHGLRVRIHVVV*FIRQSMGLPAL Trigger: TAGGGCAGGTAAACCCATACTCTGACGAATGAAGCAGACTACCACGTGTATGCGTACTCTCAGGCCGTGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR CAA 90 bp | AGGCAAATACAACATCAGAGATCACACGGGACTCTGAGTGACCGAAAAGAGGTGTCTGTCCCTGTGCCTTaGGGCCTGTCAAGTTCATCG | + |
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Preference number: 3 (lower is better) Translates to: RQIQHQRSHGTLSDRKEVSVPVP*GLSSSS Trigger: CGATGAACTTGACAGGCCCAAAGGCACAGGGACAGA...CACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR TCA 72 bp | CTCTCAGGACATAACAGACACTCAGTAAGTTTCTCTTaGGCTGCGCACAGAGCCCGGCACTCATCTCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: LSGHNRHSVSFS*AAHRARHSSLE Trigger: CTCAAGAGATGAGTGCCGGGCTCTGTGCGCAGCTCAAGAGAAACTTACTGAGTGTCTGTTATGTCCTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 72 bp | CCCAGGAAACCCAGGGTTTTGGAAATGTGGCCAAGGTaGCTGAGAGGCAAATACAACATCAGAGATCACACG | + |
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Preference number: 3 (lower is better) Translates to: PRKPRVLEMWPR*LRGKYNIRDHT Trigger: CGTGTGATCTCTGATGTTGTATTTGCCTCTCAGCCACCTTGGCCACATTTCCAAAACCCTGGGTTTCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR GCA 72 bp | GGTAGTCTGCTTCATTCGTCAGAGTATGGGTTTACCTaGCCTAAACACCTGCACAGTGGCAACCACTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: GSLLHSSEYGFT*PKHLHSGNHSL Trigger: TAAGGAGTGGTTGCCACTGTGCAGGTGTTTAGGGCAGGTAAACCCATACTCTGACGAATGAAGCAGACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 72 bp | CTGGATTCTCCCAGGAAACCCAGGGTTTTGGAAATGTaGCCAAGGTGGCTGAGAGGCAAATACAACATCAGA | + |
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Preference number: 3 (lower is better) Translates to: LDSPRKPRVLEM*PRWLRGKYNIR Trigger: TCTGATGTTGTATTTGCCTCTCAGCCACCTTGGCCACATTTCCAAAACCCTGGGTTTCCTGGGAGAATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 72 bp | GTGAGCACCGGCTCCTTGGATACACAACTGGGTCACTaGTTAGCCAGGTATCATTTCAGCCCTTTCTTTTAC | + |
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Preference number: 3 (lower is better) Translates to: VSTGSLDTQLGH*LARYHFSPFFY Trigger: GTAAAAGAAAGGGCTGAAATGATACCTGGCTAACCAGTGACCCAGTTGTGTATCCAAGGAGCCGGTGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR GCA 72 bp | CTCTGTCCTCGGTGCCTACATCTGTGTTCCCTGGGCTaGTGTTTAATGTTGCTGTTTCTAACGTTCATCCTT | + |
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Preference number: 3 (lower is better) Translates to: LCPRCLHLCSLG*CLMLLFLTFIL Trigger: AAGGATGAACGTTAGAAACAGCAACATTAAACAGCAGCCCAGGGAACACAGATGTAGGCACCGAGGACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 72 bp | CTGCTGTTTAATGTTGCTGTTTCTAACGTTCATCCTTaGGTCCTTGATGCCAGGGAGCAGGGATGTCTCATG | + |
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Preference number: 3 (lower is better) Translates to: LLFNVAVSNVHP*VLDAREQGCLM Trigger: CATGAGACATCCCTGCTCCCTGGCATCAAGGACCCAAGGATGAACGTTAGAAACAGCAACATTAAACAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR-3UTR CAA 90 bp | ATGACCATTACAGGTTTCAAAGGTACCCTAGGTTTTCTAGGTGAGAGTTCACACCTCAGTAAGTTTCTCTaGAGCTGCGCACAGAGCCCG | + |
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Preference number: 3 (lower is better) Translates to: MTITGFKGTLGFLGESSHLSKFL*SCAQSP Trigger: CGGGCTCTGTGCGCAGCTCAAGAGAAACTTACTGAG...GTGTGAACTCTCACCTAGAAAACCTAGGGTACCTTTGAAACCTGTAATGGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR TCA 72 bp | GCAAATACAACATCAGAGATCACACGGGACTCTGAGTaGCCGAAAAGAGGTGAACAGGAGGGAGATTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: ANTTSEITRDSE*PKRGEQEGDLN Trigger: GTTCAAATCTCCCTCCTGTTCACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CCA 72 bp | TGGTTAGCCAGGTATCATTTCAGCCCTTTCTTTTACTaGATTCTCCCAGGAAACCCAGGGTTTTGGAAATGT | + |
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Preference number: 3 (lower is better) Translates to: WLARYHFSPFFY*ILPGNPGFWKC Trigger: ACATTTCCAAAACCCTGGGTTTCCTGGGAGAATCCAGTAAAAGAAAGGGCTGAAATGATACCTGGCTAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | CCTTGGGTCCTTGATGCCAGGGAGCAGGGATGTCTCATGACTTCTGAGATAAACGATGACAGCCGGGGCTaGTCTCCTGGGGCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PWVLDAREQGCLMTSEINDDSRG*SPGAPP Trigger: AGGAGGAGCCCCAGGAGAGCAGCCCCGGCTGTCATC...GTTTATCTCAGAAGTCATGAGACATCCCTGCTCCCTGGCATCAAGGACCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | CCTTGGGTCCTTGATGCCAGGGAGCAGGGATGTCTCATGACTTCTGAGATAAACCTGTGGCTCTCCCCATaGCGCCTTCACTGGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PWVLDAREQGCLMTSEINLWLSP*RLHWWS Trigger: TGACCACCAGTGAAGGCGCCATGGGGAGAGCCACAG...GTTTATCTCAGAAGTCATGAGACATCCCTGCTCCCTGGCATCAAGGACCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| 3UTR CAA 72 bp | TCTCTTGAGCTGCGCACAGAGCCCGGCACTCATCTCTaGAGGCAGCATAGAAGCCAGAGTGAACTCTCACCT | + |
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Preference number: 4 (lower is better) Translates to: SLELRTEPGTHL*RQHRSQSELSP Trigger: AGGTGAGAGTTCACTCTGGCTTCTATGCTGCCTCAAGAGATGAGTGCCGGGCTCTGTGCGCAGCTCAAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | CTGTCCTCGGTGCCTACATCTGTGTTCCCTGGGCTGCTGTTTAATGTTGCTGTTGTCTCAGCTACCTGGTaGAGGAAGAGGGGAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LSSVPTSVFPGLLFNVAVVSATW*RKRGSA Trigger: GGCACTTCCCCTCTTCCTCCACCAGGTAGCTGAGAC...AACAGCAACATTAAACAGCAGCCCAGGGAACACAGATGTAGGCACCGAGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | CACCTGCAGGGGGATACTCCAATTCATGCAATAAATGACCATTACAGGTTTCAACCGGGGCTGCTCTCCTaGGGCTCCTCCTCATGCCGG | + |
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Preference number: 4 (lower is better) Translates to: HLQGDTPIHAINDHYRFQPGLLS*GSSSCR Trigger: CCGGCATGAGGAGGAGCCCCAGGAGAGCAGCCCCGG...TTGAAACCTGTAATGGTCATTTATTGCATGAATTGGAGTATCCCCCTGCAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | AGGCAAATACAACATCAGAGATCACACGGGACTCTGAGTGACCGAAAAGAGGTGGGTCCAGTGTGGCATTaGTGCTGCTGGGCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RQIQHQRSHGTLSDRKEVGPVWH*CCWAAP Trigger: AGGAGCTGCCCAGCAGCACCAATGCCACACTGGACC...CACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | AGCCCTTTCTTTTACTGGATTCTCCCAGGAAACCCAGGGTTTTGGAAATGTGGCTGGCTCTTTGGCTGCTaGTTCTGTCCCCACTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SPFFYWILPGNPGFWKCGWLFGC*FCPHCL Trigger: GAGGCAGTGGGGACAGAAGCAGCAGCCAAAGAGCCA...GCCACATTTCCAAAACCCTGGGTTTCCTGGGAGAATCCAGTAAAAGAAAGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGCAGCTGGCCCTGACCTaGTCCCGGCTGTCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMQLALT*SRLSPG Trigger: CCCTGGAGACAGCCGGGAGCAGGTCAGGGCCAGCTG...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | AGGCAAATACAACATCAGAGATCACACGGGACTCTGAGTGACCGAAAAGAGGTGTCCAGGGACTGGGTGTaGAGGTCCAGTGTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RQIQHQRSHGTLSDRKEVSRDWV*RSSVAL Trigger: CAATGCCACACTGGACCTCCACACCCAGTCCCTGGA...CACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAATACAACATCAGAGATCACACGGGACTCTGAGTGACCGAAAAGAGGTGGTCTCCAAGCCAGCCTaGCTCTGTGCTGATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQIQHQRSHGTLSDRKEVVSKPA*LCADFP Trigger: TGGGAAATCAGCACAGAGTCAGGCTGGCTTGGAGAC...CACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | ACACAACTGGGTCACTGGTTAGCCAGGTATCATTTCAGCCCTTTCTTTTACTGGGCTTGGAGTGTTTTCTaGGTTCTCCGTGGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLGHWLARYHFSPFFYWAWSVF*VLRGGC Trigger: GCAGCCCCCACGGAGAACGCAGAAAACACTCCAAGC...CCAGTAAAAGAAAGGGCTGAAATGATACCTGGCTAACCAGTGACCCAGTTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | ATGACCATTACAGGTTTCAAAGGTACCCTAGGTTTTCTAGGTGAGAGTTCACACCCAGTGTGGCATTGGTaGTGCTGGGCAGCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MTITGFKGTLGFLGESSHPVWHW*CWAAPP Trigger: CGGAGGAGCTGCCCAGCAGCACCAATGCCACACTGG...GTGTGAACTCTCACCTAGAAAACCTAGGGTACCTTTGAAACCTGTAATGGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | TCAACTCGGGGCCAACATCTCTACAGTTTATCTAGTTCACAGGTAAGCCTTCTCCGCAGCTGCTGTCTTTaGAGGCATTCGAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STRGQHLYSLSSSQVSLLRSCCL*RHSRQQ Trigger: CTGCTGCCTCGAATGCCTGCAAAGACAGCAGCTGCG...GAGAAGGCTTACCTGTGAACTAGATAAACTGTAGAGATGTTGGCCCCGAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | TCAACTCGGGGCCAACATCTCTACAGTTTATCTAGTTCACAGGTAAGCCTTCTCGGGCAGCGCTTCAAATaGGTCCTGCAGAGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STRGQHLYSLSSSQVSLLGQRFK*VLQRKA Trigger: TGCCTTCCTCTGCAGGACGCATTTGAAGCGCTGCCC...GAGAAGGCTTACCTGTGAACTAGATAAACTGTAGAGATGTTGGCCCCGAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | TCAACTCGGGGCCAACATCTCTACAGTTTATCTAGTTCACAGGTAAGCCTTCTCGGACACCAGCCCTTCTaGAGGAATGGCCTCTGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: STRGQHLYSLSSSQVSLLGHQPF*RNGLCD Trigger: ATCGCAGAGGCCATTCCTGCAGAAGGGCTGGTGTCC...GAGAAGGCTTACCTGTGAACTAGATAAACTGTAGAGATGTTGGCCCCGAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | CCTTGGGTCCTTGATGCCAGGGAGCAGGGATGTCTCATGACTTCTGAGATAAACTCTGTGCAGGATGGCTaGCTACTGTGTCATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PWVLDAREQGCLMTSEINSVQDG*LLCHSS Trigger: AGAGGAATGACACAGTAGGCAGCCATCCTGCACAGA...GTTTATCTCAGAAGTCATGAGACATCCCTGCTCCCTGGCATCAAGGACCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | ACACAACTGGGTCACTGGTTAGCCAGGTATCATTTCAGCCCTTTCTTTTACTGGAGAGGGGAAGTGCCCTaGAGTCCATCTGTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLGHWLARYHFSPFFYWRGEVP*SPSVPP Trigger: AGGTGGCACAGATGGACTCCAGGGCACTTCCCCTCT...CCAGTAAAAGAAAGGGCTGAAATGATACCTGGCTAACCAGTGACCCAGTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | TCAACTCGGGGCCAACATCTCTACAGTTTATCTAGTTCACAGGTAAGCCTTCTCTGTGAGGCTGGTCCCTaGGCAGCGCTTCAAATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: STRGQHLYSLSSSQVSLLCEAGP*AALQMR Trigger: ACGCATTTGAAGCGCTGCCCAGGGACCAGCCTCACA...GAGAAGGCTTACCTGTGAACTAGATAAACTGTAGAGATGTTGGCCCCGAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | CCTTGGGTCCTTGATGCCAGGGAGCAGGGATGTCTCATGACTTCTGAGATAAACTGCATCTGTGCAGGATaGCTGCCTACTGTGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PWVLDAREQGCLMTSEINCICAG*LPTVSF Trigger: GAATGACACAGTAGGCAGCCATCCTGCACAGATGCA...GTTTATCTCAGAAGTCATGAGACATCCCTGCTCCCTGGCATCAAGGACCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS-3UTR TCA 90 bp | TCAACTCGGGGCCAACATCTCTACAGTTTATCTAGTTCACAGGTAAGCCTTCTCAGCCTGACTCTGTGCTaGTTTCCCATCACTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: STRGQHLYSLSSSQVSLLSLTLC*FPITGR Trigger: ACGGCCAGTGATGGGAAATCAGCACAGAGTCAGGCT...GAGAAGGCTTACCTGTGAACTAGATAAACTGTAGAGATGTTGGCCCCGAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | AGGCAAATACAACATCAGAGATCACACGGGACTCTGAGTGACCGAAAAGAGGTGCCGGTGGAGAGCTTCTaGTCTGCCACTGATTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: RQIQHQRSHGTLSDRKEVPVESF*SATDSL Trigger: TAGTGAATCAGTGGCAGAGCAGAAGCTCTCCACCGG...CACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGTCCTTGATGCCAGGGAGCAGGGATGTCTCATGACTTCTGAGATAAACCCACCAACCTCATCTTaGTCCAGGTTGTCGTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: PWVLDAREQGCLMTSEINPPTSS*SRLSSI Trigger: AATAGACGACAACCTGGAGCAAGATGAGGTTGGTGG...GTTTATCTCAGAAGTCATGAGACATCCCTGCTCCCTGGCATCAAGGACCCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS-3UTR CCA 90 bp | AGGCAAATACAACATCAGAGATCACACGGGACTCTGAGTGACCGAAAAGAGGTGCAATCTCTGGCTCTTTaGCTGCTGCTTCTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQIQHQRSHGTLSDRKEVQSLAL*LLLLSP Trigger: TGGGGACAGAAGCAGCAGCCAAAGAGCCAGAGATTG...CACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | ATGACCATTACAGGTTTCAAAGGTACCCTAGGTTTTCTAGGTGAGAGTTCACACCTTTCCTGCAGTCCCTaGAAGCTCGGGGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MTITGFKGTLGFLGESSHLSCSP*KLGGSC Trigger: ACAGCTTCCCCCGAGCTTCCAGGGACTGCAGGAAAG...GTGTGAACTCTCACCTAGAAAACCTAGGGTACCTTTGAAACCTGTAATGGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR TCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGACGCTGTCCCCCGGATaGCATCCATCTTGTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMTLSPG*HPSCGS Trigger: AGAGCCACAAGATGGATGTCATCCGGGGGACAGCGT...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR TCA 90 bp | CAGTTCTTCAGAACTCTAGGTATAAATAGTTGTCAGTACTTTCAAATGAGAGGAGCTACCTCACTGCTGTaGGGCTGGTCCCTGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFFRTLGINSCQYFQMRGATSLL*GWSLGS Trigger: GCTGCCCAGGGACCAGCCTCACAGCAGTGAGGTAGC...TCCTCTCATTTGAAAGTACTGACAACTATTTATACCTAGAGTTCTGAAGAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | ATGACCATTACAGGTTTCAAAGGTACCCTAGGTTTTCTAGGTGAGAGTTCACACCTGTCCCAAGGAAGGTaGGTCATCTTTGGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MTITGFKGTLGFLGESSHLSQGR*VIFGTF Trigger: GAAGGTCCCAAAGATGACCCACCTTCCTTGGGACAG...GTGTGAACTCTCACCTAGAAAACCTAGGGTACCTTTGAAACCTGTAATGGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGGTCCCGCCTTTCTTCTaGGGCCATACACACTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMVPPFF*GHTHFQ Trigger: CTGGAAGTGTGTATGGCCCCAGAAGAAAGGCGGGAC...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR TCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGCAGTTCCTCCAACACTaGGGAAGACAGTGGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMQFLQH*GRQWLC Trigger: GCATAGCCACTGTCTTCCTCAGTGTTGGAGGAACTG...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | ATGACCATTACAGGTTTCAAAGGTACCCTAGGTTTTCTAGGTGAGAGTTCACACTGCTTCTGTCCCCACTaGCTCTTCAGACATTATCGC | + |
|
Preference number: 4 (lower is better) Translates to: MTITGFKGTLGFLGESSHCFCPH*LFRHYR Trigger: GCGATAATGTCTGAAGAGGCAGTGGGGACAGAAGCA...GTGTGAACTCTCACCTAGAAAACCTAGGGTACCTTTGAAACCTGTAATGGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | GTTGTGCCTGCACATTGTCGTCAAGTTAAAAGAATAAAGGTCATCTTTGTATTCCTCTGGCTCTTTGGCTaGTGCTTCTGTCCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVPAHCRQVKRIKVIFVFLWLFG*CFCPHC Trigger: GCAGTGGGGACAGAAGCAGCAGCCAAAGAGCCAGAG...GAATACAAAGATGACCTTTATTCTTTTAACTTGACGACAATGTGCAGGCACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGCTTCTGCTGCATCTGTaGAGGATGGCTGCCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMLLLHL*RMAAYC Trigger: ACAGTAGGCAGCCATCCTGCACAGATGCAGCAGAAG...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | AGCCCTTTCTTTTACTGGATTCTCCCAGGAAACCCAGGGTTTTGGAAATGTGGCCCCATTGTTCCTGAATaGCAGAAAGATTTGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPFFYWILPGNPGFWKCGPIVPE*QKDLQA Trigger: TGCTTGCAAATCTTTCTGCCATTCAGGAACAATGGG...GCCACATTTCCAAAACCCTGGGTTTCCTGGGAGAATCCAGTAAAAGAAAGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGGCTTCAAATGCGTCCTaGAGAGGAAGGCAGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMASNAS*RGRQSS Trigger: AGAACTCTGCCTTCCTCTGCAGGACGCATTTGAAGC...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | CAGTTCTTCAGAACTCTAGGTATAAATAGTTGTCAGTACTTTCAAATGAGAGGACCTGTTCAGACACTGTaGCTCTCCCCATGGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFFRTLGINSCQYFQMRGPVQTL*LSPWRL Trigger: AAGGCGCCATGGGGAGAGCCACAGTGTCTGAACAGG...TCCTCTCATTTGAAAGTACTGACAACTATTTATACCTAGAGTTCTGAAGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGTCCTCTTCTTCAGTATaGACACCAGCCCTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMSSSSV*TPALLQ Trigger: CTGCAGAAGGGCTGGTGTCCATACTGAAGAAGAGGA...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGACAGGTTTCAATCTCTaGCTCTTTGGCTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMTGFNL*LFGCCF Trigger: GAAGCAGCAGCCAAAGAGCCAGAGATTGAAACCTGT...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | GTTGTGCCTGCACATTGTCGTCAAGTTAAAAGAATAAAGGTCATCTTTGTATTCGGCATCACCTGGAGGTaGACTCTTAGGAGAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVPAHCRQVKRIKVIFVFGITWR*TLRRAF Trigger: AAAAGCTCTCCTAAGAGTGCACCTCCAGGTGATGCC...GAATACAAAGATGACCTTTATTCTTTTAACTTGACGACAATGTGCAGGCACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | TCAACTCGGGGCCAACATCTCTACAGTTTATCTAGTTCACAGGTAAGCCTTCTCAATGGCAGAAAGATTTaGAAGCAATTGCTCATGATA | + |
|
Preference number: 4 (lower is better) Translates to: STRGQHLYSLSSSQVSLLNGRKI*KQLLMI Trigger: TATCATGAGCAATTGCTTGCAAATCTTTCTGCCATT...GAGAAGGCTTACCTGTGAACTAGATAAACTGTAGAGATGTTGGCCCCGAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | CAGTTCTTCAGAACTCTAGGTATAAATAGTTGTCAGTACTTTCAAATGAGAGGATGCAGGAATGGCCTCTaGGATCTCTATCTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QFFRTLGINSCQYFQMRGCRNGL*DLYLLG Trigger: GCCAAGAAGATAGAGATCGCAGAGGCCATTCCTGCA...TCCTCTCATTTGAAAGTACTGACAACTATTTATACCTAGAGTTCTGAAGAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | GTTGTGCCTGCACATTGTCGTCAAGTTAAAAGAATAAAGGTCATCTTTGTATTCTGTCGGCAAAGTCCGTaGAAACAGGTGACTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VVPAHCRQVKRIKVIFVFCRQSP*KQVTQC Trigger: ACATTGAGTCACCTGTTTGCACGGACTTTGCCGACA...GAATACAAAGATGACCTTTATTCTTTTAACTTGACGACAATGTGCAGGCACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | CAGTTCTTCAGAACTCTAGGTATAAATAGTTGTCAGTACTTTCAAATGAGAGGACACTTGGATCCGTGCTaGGACAGGTTTCAATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFFRTLGINSCQYFQMRGHLDPC*DRFQSL Trigger: CAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTG...TCCTCTCATTTGAAAGTACTGACAACTATTTATACCTAGAGTTCTGAAGAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR TCA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGATTAAATCCCTTTTCTaGATTTCTCAGAGGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMIKSLF*ISQRRH Trigger: GTGACGCCTCTGAGAAATTCAGAAAAGGGATTTAAT...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR GCA 90 bp | CAGTTCTTCAGAACTCTAGGTATAAATAGTTGTCAGTACTTTCAAATGAGAGGATCTTGTGGCTCTATCTaGAGACTGTATGTAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QFFRTLGINSCQYFQMRGSCGSI*RLYVGG Trigger: CCCTCCTACATACAGTCTGCAGATAGAGCCACAAGA...TCCTCTCATTTGAAAGTACTGACAACTATTTATACCTAGAGTTCTGAAGAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CCA 90 bp | GTTGTGCCTGCACATTGTCGTCAAGTTAAAAGAATAAAGGTCATCTTTGTATTCTTGTCGTCTATTTCCTaGAATCGCACTCTGCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VVPAHCRQVKRIKVIFVFLSSIS*NRTLRL Trigger: TAAGCGCAGAGTGCGATTCCAGGAAATAGACGACAA...GAATACAAAGATGACCTTTATTCTTTTAACTTGACGACAATGTGCAGGCACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR TCA 90 bp | CAGTTCTTCAGAACTCTAGGTATAAATAGTTGTCAGTACTTTCAAATGAGAGGAATTTTCATTTTCGTCTaGGACAGAAGGCAAGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QFFRTLGINSCQYFQMRGIFIFV*DRRQAC Trigger: ACACGCTTGCCTTCTGTCTCAGACGAAAATGAAAAT...TCCTCTCATTTGAAAGTACTGACAACTATTTATACCTAGAGTTCTGAAGAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 90 bp | TGGCCACACCGCAGTGGTCCTCTGTGGGAGGCGCCGGCACGCAGCTaGTGTCTTTGCAGGCATTCGAGGCAGCAGCTGGCCCTGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WPHRSGPLWEAPARS*CLCRHSRQQLALTC Trigger: GCAGGTCAGGGCCAGCTGCTGCCTCGAATGCCTGCAAAGACAGCAGCTGCGTGCCGGCGCCTCCCACAGAGGACCACTGCGGTGTGGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | AGCTACCTGGTGGAGGAAGAGGGGAAGTGCCCTGGAGTCCATCTGTaGCACCTCGCCTCGGATCAGCGAGAAGAGTGGCTGCAGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYLVEEEGKCPGVHL*HLASDQREEWLQRW Trigger: CCAGCGCTGCAGCCACTCTTCTCGCTGATCCGAGGCGAGGTGGCACAGATGGACTCCAGGGCACTTCCCCTCTTCCTCCACCAGGTAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 90 bp | GCCGGGGCTGCTCTCCTGGGGCTCCTCCTCATGCCGGTCTCCACTTaGATCCGTGCTGGGACAGGTTTCAATCTCTGGCTCTTTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGAALLGLLLMPVST*IRAGTGFNLWLFGC Trigger: GCAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAGACCGGCATGAGGAGGAGCCCCAGGAGAGCAGCCCCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS TCA 90 bp | AGGCAGTGCACCGTCGTCGCCGGTGGAGAGCTTCTGCTCTGCCACTaGTTCACTAGGAGGAGCCACCTTAGGGTCTCTGGCCACACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQCTVVAGGELLLCH*FTRRSHLRVSGHTA Trigger: TGCGGTGTGGCCAGAGACCCTAAGGTGGCTCCTCCTAGTGAATCAGTGGCAGAGCAGAAGCTCTCCACCGGCGACGACGGTGCACTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | TGTGGCATTGGTGCTGCTGGGCAGCTCCTCCGTGTGGTCCTTTCCTaGAGTCCCTGGAAGCTCGGGGGAAGCTGTCTGCCACTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: CGIGAAGQLLRVVLS*SPWKLGGSCLPLHL Trigger: CAGATGGAGTGGCAGACAGCTTCCCCCGAGCTTCCAGGGACTGCAGGAAAGGACCACACGGAGGAGCTGCCCAGCAGCACCAATGCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CCA 90 bp | CAGGCTGCCGCGGCTCAGCTACCTCACTGCTGTGAGGCTGGTCCCTaGGCAGCGCTTCAAATGCGTCCTGCAGAGGAAGGCAGAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QAAAAQLPHCCEAGP*AALQMRPAEEGRVL Trigger: AAGAACTCTGCCTTCCTCTGCAGGACGCATTTGAAGCGCTGCCCAGGGACCAGCCTCACAGCAGTGAGGTAGCTGAGCCGCGGCAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS TCA 90 bp | CCGTGGGGGCTGCCTCGCAGCTGGACGGGAAGCTTTCGTTATTGTTaGGACTGTCCTGTTCAGACACTGTGGCTCTCCCCATGGCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWGLPRSWTGSFRYC*DCPVQTLWLSPWRL Trigger: AAGGCGCCATGGGGAGAGCCACAGTGTCTGAACAGGACAGTCTCAACAATAACGAAAGCTTCCCGTCCAGCTGCGAGGCAGCCCCCACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS TCA 90 bp | TCTCCAAGCCAGCCTGACTCTGTGCTGATTTCCCATCACTGGCCGTaGCATCAGGCTGCCGCGGCTCAGCTACCTCACTGCTGTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSQPDSVLISHHWP*HQAAAAQLPHCCEA Trigger: AGCCTCACAGCAGTGAGGTAGCTGAGCCGCGGCAGCCTGATGTCACGGCCAGTGATGGGAAATCAGCACAGAGTCAGGCTGGCTTGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 90 bp | GACTGTCCTGTTCAGACACTGTGGCTCTCCCCATGGCGCCTTCACTaGTGGTCAGACCCGCAGGCCCGTCTCCGGCAAGCTGATTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DCPVQTLWLSPWRLH*WSDPQARLRQADFH Trigger: ATGAAAATCAGCTTGCCGGAGACGGGCCTGCGGGTCTGACCACCAGTGAAGGCGCCATGGGGAGAGCCACAGTGTCTGAACAGGACAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | TGCTCTCCTGGGGCTCCTCCTCATGCCGGTCTCCACTTGGATCCGTaGTGGGACAGGTTTCAATCTCTGGCTCTTTGGCTGCTGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSPGAPPHAGLHLDP*WDRFQSLALWLLLL Trigger: CAGAAGCAGCAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAGACCGGCATGAGGAGGAGCCCCAGGAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS TCA 90 bp | GCGCCTTCACTGGTGGTCAGACCCGCAGGCCCGTCTCCGGCAAGCTaGTTTTCATTTTCGTCTGAGACAGAAGGCAAGCGTGTCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: APSLVVRPAGPSPAS*FSFSSETEGKRVTL Trigger: GAGAGTGACACGCTTGCCTTCTGTCTCAGACGAAAATGAAAATCAGCTTGCCGGAGACGGGCCTGCGGGTCTGACCACCAGTGAAGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | TTCCTGGAAATAGGTCTCAGCTACCTGGTGGAGGAAGAGGGGAAGTaGCCTGGAGTCCATCTGTGCCACCTCGCCTCGGATCAGCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLEIGLSYLVEEEGK*PGVHLCHLASDQRE Trigger: TTCTCGCTGATCCGAGGCGAGGTGGCACAGATGGACTCCAGGGCACTTCCCCTCTTCCTCCACCAGGTAGCTGAGACCTATTTCCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CCA 90 bp | TGTCCTGTTCAGACACTGTGGCTCTCCCCATGGCGCCTTCACTGGTaGTCAGACCCGCAGGCCCGTCTCCGGCAAGCTGATTTTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: CPVQTLWLSPWRLHW*SDPQARLRQADFHF Trigger: AAAATGAAAATCAGCTTGCCGGAGACGGGCCTGCGGGTCTGACCACCAGTGAAGGCGCCATGGGGAGAGCCACAGTGTCTGAACAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS-3UTR CAA 90 bp | CCTTGGGTCCTTGATGCCAGGGAGCAGGGATGTCTCATGACTTCTGAGATAAACAGGTCCAGTGTGGCATaGGTGCTGCTGGGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PWVLDAREQGCLMTSEINRSSVA*VLLGSS Trigger: GGAGCTGCCCAGCAGCACCAATGCCACACTGGACCT...GTTTATCTCAGAAGTCATGAGACATCCCTGCTCCCTGGCATCAAGGACCCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | TTTGGGACCTTCGCTTGGAGTGTTTTCTGCGTTCTCCGTGGGGGCTaGCTCGCAGCTGGACGGGAAGCTTTCGTTATTGTTGAGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FGTFAWSVFCVLRGG*LAAGREAFVIVETV Trigger: GACAGTCTCAACAATAACGAAAGCTTCCCGTCCAGCTGCGAGGCAGCCCCCACGGAGAACGCAGAAAACACTCCAAGCGAAGGTCCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | CCTCTGCGATCTCTATCTTCTTGGCCAGATCATCAAGGGAGAGCGTaGTCTCGTCAGGAGGCAGATCCTCCTGGAGACTGTAGGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLRSLSSWPDHQGRA*SRQEADPPGDCRTL Trigger: AAGCGTCCTACAGTCTCCAGGAGGATCTGCCTCCTGACGAGAGCACGCTCTCCCTTGATGATCTGGCCAAGAAGATAGAGATCGCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CCA 90 bp | CTCCACTTGGATCCGTGCTGGGACAGGTTTCAATCTCTGGCTCTTTaGCTGCTGCTTCTGTCCCCACTGCCTCTTCAGACATTATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LHLDPCWDRFQSLAL*LLLLSPLPLQTLSP Trigger: GGGCGATAATGTCTGAAGAGGCAGTGGGGACAGAAGCAGCAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CCA 90 bp | ATGCCGGTCTCCACTTGGATCCGTGCTGGGACAGGTTTCAATCTCTaGCTCTTTGGCTGCTGCTTCTGTCCCCACTGCCTCTTCAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: MPVSTWIRAGTGFNL*LFGCCFCPHCLFRH Trigger: ATGTCTGAAGAGGCAGTGGGGACAGAAGCAGCAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAGACCGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS TCA 90 bp | ACAGAAGGCAAGCGTGTCACTCTCCTTTCCACGCTGTCCCCCGGATaGCATCCATCTTGTGGCTCTATCTGCAGACTGTATGTAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TEGKRVTLLSTLSPG*HPSCGSICRLYVGG Trigger: CCCTCCTACATACAGTCTGCAGATAGAGCCACAAGATGGATGTCATCCGGGGGACAGCGTGGAAAGGAGAGTGACACGCTTGCCTTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | TGGATCCGTGCTGGGACAGGTTTCAATCTCTGGCTCTTTGGCTGCTaGTTCTGTCCCCACTGCCTCTTCAGACATTATCGCCCTTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: WIRAGTGFNLWLFGC*FCPHCLFRHYRPCK Trigger: CTTGCAAGGGCGATAATGTCTGAAGAGGCAGTGGGGACAGAAGCAGCAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | TGTCCCGCCTTTCTTCTGGGGCCATACACACTTCCAGACACAGTGTaGTTACGTCACAGGCTTTCCTGTCACCACAGAGTGCACTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPAFLLGPYTLPDTV*LRHRLSCHHRVHSQ Trigger: CTGAGAGTGCACTCTGTGGTGACAGGAAAGCCTGTGACGTAAGCACACTGTGTCTGGAAGTGTGTATGGCCCCAGAAGAAAGGCGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 90 bp | GAACCACCACCAACCTCATCTTGCTCCAGGTTGTCGTCTATTTCCTaGAATCGCACTCTGCGCTTAGCCGGCTTCTGCTGCATCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EPPPTSSCSRLSSIS*NRTLRLAGFCCICA Trigger: TGCACAGATGCAGCAGAAGCCGGCTAAGCGCAGAGTGCGATTCCAGGAAATAGACGACAACCTGGAGCAAGATGAGGTTGGTGGTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | CCTCTTCTTCAGTATGGACACCAGCCCTTCTGCAGGAATGGCCTCTaGGATCTCTATCTTCTTGGCCAGATCATCAAGGGAGAGCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLLQYGHQPFCRNGL*DLYLLGQIIKGERA Trigger: AGCACGCTCTCCCTTGATGATCTGGCCAAGAAGATAGAGATCGCAGAGGCCATTCCTGCAGAAGGGCTGGTGTCCATACTGAAGAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CCA 90 bp | TGTCACTCTCCTTTCCACGCTGTCCCCCGGATGACATCCATCTTGTaGCTCTATCTGCAGACTGTATGTAGGAGGGTCGCTGTCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CHSPFHAVPRMTSIL*LYLQTVCRRVAVIH Trigger: ATGGATGACAGCGACCCTCCTACATACAGTCTGCAGATAGAGCCACAAGATGGATGTCATCCGGGGGACAGCGTGGAAAGGAGAGTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CCA 90 bp | TTCCGTTTCCTTACTCACTCGGTCTTCACTGTCCCGCCTTTCTTCTaGGGCCATACACACTTCCAGACACAGTGTGCTTACGTCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FRFLTHSVFTVPPFF*GHTHFQTQCAYVTG Trigger: GCCTGTGACGTAAGCACACTGTGTCTGGAAGTGTGTATGGCCCCAGAAGAAAGGCGGGACAGTGAAGACCGAGTGAGTAAGGAAACGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | ACAGGTTTCAATCTCTGGCTCTTTGGCTGCTGCTTCTGTCCCCACTaGCTCTTCAGACATTATCGCCCTTGCAAGGCTTTTCCTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGFNLWLFGCCFCPH*LFRHYRPCKAFPLW Trigger: CCAGAGAGGAAAAGCCTTGCAAGGGCGATAATGTCTGAAGAGGCAGTGGGGACAGAAGCAGCAGCCAAAGAGCCAGAGATTGAAACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | CACAGCAAGATGAGCAGGATGCAGGAACCACCACCAACCTCATCTTaGTCCAGGTTGTCGTCTATTTCCTGGAATCGCACTCTGCGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: HSKMSRMQEPPPTSS*SRLSSISWNRTLRL Trigger: TAAGCGCAGAGTGCGATTCCAGGAAATAGACGACAACCTGGAGCAAGATGAGGTTGGTGGTGGTTCCTGCATCCTGCTCATCTTGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS TCA 90 bp | AGTGTAATAGAAGTCCACGTTGTCGGCAAAGTCCGTGCAAACAGGTaGCTCAATGTTGCCCAGGGTGCAGTAGAGTGCAGTTCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVIEVHVVGKVRANR*LNVAQGAVECSSSN Trigger: GTTGGAGGAACTGCACTCTACTGCACCCTGGGCAACATTGAGTCACCTGTTTGCACGGACTTTGCCGACAACGTGGACTTCTATTACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 90 bp | GCCTACTGTGTCATTCCTCTTCTTCAGTATGGACACCAGCCCTTCTaGAGGAATGGCCTCTGCGATCTCTATCTTCTTGGCCAGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: AYCVIPLLQYGHQPF*RNGLCDLYLLGQII Trigger: GATGATCTGGCCAAGAAGATAGAGATCGCAGAGGCCATTCCTGCAGAAGGGCTGGTGTCCATACTGAAGAAGAGGAATGACACAGTAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CAA 90 bp | CTGTCCTCGGTGCCTACATCTGTGTTCCCTGGGCTGCTGTTTAATGTTGCTGTTCGGATGACATCCATCTaGTGGCTCTATCTGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LSSVPTSVFPGLLFNVAVRMTSI*WLYLQT Trigger: AGTCTGCAGATAGAGCCACAAGATGGATGTCATCCG...AACAGCAACATTAAACAGCAGCCCAGGGAACACAGATGTAGGCACCGAGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS-3UTR CAA 90 bp | CACCTGCAGGGGGATACTCCAATTCATGCAATAAATGACCATTACAGGTTTCAACATGCCGGTCTCCACTaGGATCCGTGCTGGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLQGDTPIHAINDHYRFQHAGLH*DPCWDR Trigger: CCTGTCCCAGCACGGATCCAAGTGGAGACCGGCATG...TTGAAACCTGTAATGGTCATTTATTGCATGAATTGGAGTATCCCCCTGCAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CAA 90 bp | TCAACTCGGGGCCAACATCTCTACAGTTTATCTAGTTCACAGGTAAGCCTTCTCGGCGCTGTCTTAAGCTaGGACAAGAGAGGGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: STRGQHLYSLSSSQVSLLGAVLS*DKRGSW Trigger: CCAAGACCCTCTCTTGTCCAAGCTTAAGACAGCGCC...GAGAAGGCTTACCTGTGAACTAGATAAACTGTAGAGATGTTGGCCCCGAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CAA 90 bp | CACCTGCAGGGGGATACTCCAATTCATGCAATAAATGACCATTACAGGTTTCAAACGCAGCTGCTGTCTTaGCAGGCATTCGAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLQGDTPIHAINDHYRFQTQLLS*QAFEAA Trigger: TGCTGCCTCGAATGCCTGCAAAGACAGCAGCTGCGT...TTGAAACCTGTAATGGTCATTTATTGCATGAATTGGAGTATCCCCCTGCAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CAA 90 bp | CTGTCCTCGGTGCCTACATCTGTGTTCCCTGGGCTGCTGTTTAATGTTGCTGTTGGACAGCTTTCCATTTaGTTTCCCATTGTTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSSVPTSVFPGLLFNVAVGQLSI*FPIVPE Trigger: TTCAGGAACAATGGGAAACAAAATGGAAAGCTGTCC...AACAGCAACATTAAACAGCAGCCCAGGGAACACAGATGTAGGCACCGAGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CAA 90 bp | TCAACTCGGGGCCAACATCTCTACAGTTTATCTAGTTCACAGGTAAGCCTTCTCACCACCAACCTCATCTaGCTCCAGGTTGTCGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: STRGQHLYSLSSSQVSLLTTNLI*LQVVVY Trigger: ATAGACGACAACCTGGAGCAAGATGAGGTTGGTGGT...GAGAAGGCTTACCTGTGAACTAGATAAACTGTAGAGATGTTGGCCCCGAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CAA 90 bp | AGCCCTTTCTTTTACTGGATTCTCCCAGGAAACCCAGGGTTTTGGAAATGTGGCCCCTTGGACTTCTTTTaGCAGGTAGTTTTTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPFFYWILPGNPGFWKCGPLDFF*QVVFGP Trigger: AGGACCAAAAACTACCTGCAAAAAGAAGTCCAAGGG...GCCACATTTCCAAAACCCTGGGTTTCCTGGGAGAATCCAGTAAAAGAAAGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS TCA 90 bp | GGTTCCACAGGCGCTGTCTTAAGCTTGGACAAGAGAGGGTCTTGGTaGGTTGTGCAAATTTTAGCAAGCTGTTCAAAATCTTCACCATTA | + |
|
Preference number: 5 (lower is better) Translates to: GSTGAVLSLDKRGSW*VVQILASCSKSSPL Trigger: TAATGGTGAAGATTTTGAACAGCTTGCTAAAATTTGCACAACTCACCAAGACCCTCTCTTGTCCAAGCTTAAGACAGCGCCTGTGGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CAA 90 bp | AGGCAAATACAACATCAGAGATCACACGGGACTCTGAGTGACCGAAAAGAGGTGAAGATTTGCAAGCAATaGCTCATGATACAGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RQIQHQRSHGTLSDRKEVKICKQ*LMIQPF Trigger: GAAAGGCTGTATCATGAGCAATTGCTTGCAAATCTT...CACCTCTTTTCGGTCACTCAGAGTCCCGTGTGATCTCTGATGTTGTATTTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CAA 90 bp | GTTGTGCCTGCACATTGTCGTCAAGTTAAAAGAATAAAGGTCATCTTTGTATTCTCAATCTCTGGCTCTTaGGCTGCTGCTTCTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVPAHCRQVKRIKVIFVFSISGS*AAASVP Trigger: GGGGACAGAAGCAGCAGCCAAAGAGCCAGAGATTGA...GAATACAAAGATGACCTTTATTCTTTTAACTTGACGACAATGTGCAGGCACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS-3UTR CAA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGGCGATCTCTATCTTCTaGGCCAGATCATCAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMAISIF*ARSSRE Trigger: CTCCCTTGATGATCTGGCCAAGAAGATAGAGATCGC...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS-3UTR CAA 90 bp | CACCTGCAGGGGGATACTCCAATTCATGCAATAAATGACCATTACAGGTTTCAAGGACAAGAGAGGGTCTaGGTGAGTTGTGCAAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: HLQGDTPIHAINDHYRFQGQERV*VSCANF Trigger: AAAATTTGCACAACTCACCAAGACCCTCTCTTGTCC...TTGAAACCTGTAATGGTCATTTATTGCATGAATTGGAGTATCCCCCTGCAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS-3UTR CAA 90 bp | CACCTGCAGGGGGATACTCCAATTCATGCAATAAATGACCATTACAGGTTTCAACCATTTTGTTTCCCATaGTTCCTGAATGGCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLQGDTPIHAINDHYRFQPFCFP*FLNGRK Trigger: CTTTCTGCCATTCAGGAACAATGGGAAACAAAATGG...TTGAAACCTGTAATGGTCATTTATTGCATGAATTGGAGTATCCCCCTGCAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTACTTTCAAATGAGAGGAGGAGTGACATTTCAGCATAGTTGTCTGATGAAGCTTTCGTTATTGTaGAGACTGTCCTGTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CQYFQMRGGVTFQHSCLMKLSLL*RLSCSD Trigger: GTCTGAACAGGACAGTCTCAACAATAACGAAAGCTT...CATCAGACAACTATGCTGAAATGTCACTCCTCCTCTCATTTGAAAGTACTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CAA 90 bp | CCGCAGTGGTCCTCTGTGGGAGGCGCCGGCACGCAGCTGCTGTCTTaGCAGGCATTCGAGGCAGCAGCTGGCCCTGACCTGCTCCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PQWSSVGGAGTQLLS*QAFEAAAGPDLLPA Trigger: AGCCGGGAGCAGGTCAGGGCCAGCTGCTGCCTCGAATGCCTGCAAAGACAGCAGCTGCGTGCCGGCGCCTCCCACAGAGGACCACTGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 72 bp | CCTCTGTGGGAGGCGCCGGCACGCAGCTGCTGTCTTTaGAGGCATTCGAGGCAGCAGCTGGCCCTGACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PLWEAPARSCCL*RHSRQQLALTC Trigger: GCAGGTCAGGGCCAGCTGCTGCCTCGAATGCCTGCAAAGACAGCAGCTGCGTGCCGGCGCCTCCCACAGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CAA 72 bp | TCCTCTGTGGGAGGCGCCGGCACGCAGCTGCTGTCTTaGCAGGCATTCGAGGCAGCAGCTGGCCCTGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSVGGAGTQLLS*QAFEAAAGPDL Trigger: CAGGTCAGGGCCAGCTGCTGCCTCGAATGCCTGCAAAGACAGCAGCTGCGTGCCGGCGCCTCCCACAGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CCA 72 bp | CGGCTGTCTCCAGGGACTGGGTGTGGAGGTCCAGTGTaGCATTGGTGCTGCTGGGCAGCTCCTCCGTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLSPGTGCGGPV*HWCCWAAPPCG Trigger: ACCACACGGAGGAGCTGCCCAGCAGCACCAATGCCACACTGGACCTCCACACCCAGTCCCTGGAGACAGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 72 bp | GGGACTGGGTGTGGAGGTCCAGTGTGGCATTGGTGCTaGTGGGCAGCTCCTCCGTGTGGTCCTTTCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GTGCGGPVWHWC*WAAPPCGPFLQ Trigger: CTGCAGGAAAGGACCACACGGAGGAGCTGCCCAGCAGCACCAATGCCACACTGGACCTCCACACCCAGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 72 bp | CCAGGGACTGGGTGTGGAGGTCCAGTGTGGCATTGGTaGTGCTGGGCAGCTCCTCCGTGTGGTCCTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGTGCGGPVWHW*CWAAPPCGPFL Trigger: CAGGAAAGGACCACACGGAGGAGCTGCCCAGCAGCACCAATGCCACACTGGACCTCCACACCCAGTCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CAA 90 bp | AGCCGGGGCTGCTCTCCTGGGGCTCCTCCTCATGCCGGTCTCCACTaGGATCCGTGCTGGGACAGGTTTCAATCTCTGGCTCTTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRGCSPGAPPHAGLH*DPCWDRFQSLALWL Trigger: CAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAGACCGGCATGAGGAGGAGCCCCAGGAGAGCAGCCCCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 72 bp | TCCCGCAGCCTCCTCCTCGCCAGCAGCCTGCGACGTTaGATTCTGCGTCTGCATTACAGGTACGGCATCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRSLLLASSLRR*ILRLHYRYGIT Trigger: GGTGATGCCGTACCTGTAATGCAGACGCAGAATGCAACGTCGCAGGCTGCTGGCGAGGAGGAGGCTGCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 72 bp | GCGTTCACTCCCGCAGCCTCCTCCTCGCCAGCAGCCTaGGACGTTGCATTCTGCGTCTGCATTACAGGTACG | + |
|
Preference number: 6 (lower is better) Translates to: AFTPAASSSPAA*DVAFCVCITGT Trigger: CGTACCTGTAATGCAGACGCAGAATGCAACGTCGCAGGCTGCTGGCGAGGAGGAGGCTGCGGGAGTGAACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 72 bp | GTGGAGGAAGAGGGGAAGTGCCCTGGAGTCCATCTGTaGCACCTCGCCTCGGATCAGCGAGAAGAGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VEEEGKCPGVHL*HLASDQREEWL Trigger: CAGCCACTCTTCTCGCTGATCCGAGGCGAGGTGGCACAGATGGACTCCAGGGCACTTCCCCTCTTCCTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS CAA 72 bp | CTCCCGCAGCCTCCTCCTCGCCAGCAGCCTGCGACGTaGCATTCTGCGTCTGCATTACAGGTACGGCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPQPPPRQQPAT*HSASALQVRHH Trigger: GTGATGCCGTACCTGTAATGCAGACGCAGAATGCAACGTCGCAGGCTGCTGGCGAGGAGGAGGCTGCGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS TCA 72 bp | CAGCCTGACTCTGTGCTGATTTCCCATCACTGGCCGTaGCATCAGGCTGCCGCGGCTCAGCTACCTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: QPDSVLISHHWP*HQAAAAQLPHC Trigger: GCAGTGAGGTAGCTGAGCCGCGGCAGCCTGATGTCACGGCCAGTGATGGGAAATCAGCACAGAGTCAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
||
| CDS GCA 72 bp | TGGGTCATCTTTGGGACCTTCGCTTGGAGTGTTTTCTaGGTTCTCCGTGGGGGCTGCCTCGCAGCTGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: WVIFGTFAWSVF*VLRGGCLAAGR Trigger: CCGTCCAGCTGCGAGGCAGCCCCCACGGAGAACGCAGAAAACACTCCAAGCGAAGGTCCCAAAGATGACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | CCAGGCAGTGCACCGTCGTCGCCGGTGGAGAGCTTCTaGTCTGCCACTGATTCACTAGGAGGAGCCACCTTA | + |
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Preference number: 6 (lower is better) Translates to: PGSAPSSPVESF*SATDSLGGATL Trigger: TAAGGTGGCTCCTCCTAGTGAATCAGTGGCAGAGCAGAAGCTCTCCACCGGCGACGACGGTGCACTGCCTGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 72 bp | GCTCTCCTGGGGCTCCTCCTCATGCCGGTCTCCACTTaGATCCGTGCTGGGACAGGTTTCAATCTCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ALLGLLLMPVST*IRAGTGFNLWL Trigger: GAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAGACCGGCATGAGGAGGAGCCCCAGGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 90 bp | TCCGTGGGGGCTGCCTCGCAGCTGGACGGGAAGCTTTCGTTATTGTaGAGACTGTCCTGTTCAGACACTGTGGCTCTCCCCATGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: SVGAASQLDGKLSLL*RLSCSDTVALPMAP Trigger: AGGCGCCATGGGGAGAGCCACAGTGTCTGAACAGGACAGTCTCAACAATAACGAAAGCTTCCCGTCCAGCTGCGAGGCAGCCCCCACGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | GGGGCTCCTCCTCATGCCGGTCTCCACTTGGATCCGTaGTGGGACAGGTTTCAATCTCTGGCTCTTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GAPPHAGLHLDP*WDRFQSLALWL Trigger: CAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAGACCGGCATGAGGAGGAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 72 bp | TGCTCTCCTGGGGCTCCTCCTCATGCCGGTCTCCACTaGGATCCGTGCTGGGACAGGTTTCAATCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CSPGAPPHAGLH*DPCWDRFQSLA Trigger: AGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAGACCGGCATGAGGAGGAGCCCCAGGAGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | ACTGCTGTGAGGCTGGTCCCTGGGCAGCGCTTCAAATaGGTCCTGCAGAGGAAGGCAGAGTTCTTTTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: TAVRLVPGQRFK*VLQRKAEFFSV Trigger: CACCGAAAAGAACTCTGCCTTCCTCTGCAGGACGCATTTGAAGCGCTGCCCAGGGACCAGCCTCACAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 72 bp | TCCCAAGGAAGGTGGGTCATCTTTGGGACCTTCGCTTaGAGTGTTTTCTGCGTTCTCCGTGGGGGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SQGRWVIFGTFA*SVFCVLRGGCL Trigger: GAGGCAGCCCCCACGGAGAACGCAGAAAACACTCCAAGCGAAGGTCCCAAAGATGACCCACCTTCCTTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 72 bp | GCTCCTCCTCATGCCGGTCTCCACTTGGATCCGTGCTaGGACAGGTTTCAATCTCTGGCTCTTTGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: APPHAGLHLDPC*DRFQSLALWLL Trigger: CAGCAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAGACCGGCATGAGGAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 72 bp | GTCCCAAGGAAGGTGGGTCATCTTTGGGACCTTCGCTaGGAGTGTTTTCTGCGTTCTCCGTGGGGGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VPRKVGHLWDLR*ECFLRSPWGLP Trigger: AGGCAGCCCCCACGGAGAACGCAGAAAACACTCCAAGCGAAGGTCCCAAAGATGACCCACCTTCCTTGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 90 bp | TGGCTGCTGCTTCTGTCCCCACTGCCTCTTCAGACATTATCGCCCTaGCAAGGCTTTTCCTCTCTGGTGACGGTTCCACAGGCGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WLLLLSPLPLQTLSP*QGFSSLVTVPQALS Trigger: AGACAGCGCCTGTGGAACCGTCACCAGAGAGGAAAAGCCTTGCAAGGGCGATAATGTCTGAAGAGGCAGTGGGGACAGAAGCAGCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 90 bp | GACACCAGCCCTTCTGCAGGAATGGCCTCTGCGATCTCTATCTTCTaGGCCAGATCATCAAGGGAGAGCGTGCTCTCGTCAGGAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: DTSPSAGMASAISIF*ARSSRESVLSSGGR Trigger: TCTGCCTCCTGACGAGAGCACGCTCTCCCTTGATGATCTGGCCAAGAAGATAGAGATCGCAGAGGCCATTCCTGCAGAAGGGCTGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS TCA 72 bp | CTGGTGGTCAGACCCGCAGGCCCGTCTCCGGCAAGCTaGTTTTCATTTTCGTCTGAGACAGAAGGCAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: LVVRPAGPSPAS*FSFSSETEGKR Trigger: ACGCTTGCCTTCTGTCTCAGACGAAAATGAAAATCAGCTTGCCGGAGACGGGCCTGCGGGTCTGACCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | TCCTGGAATCGCACTCTGCGCTTAGCCGGCTTCTGCTaGATCTGTGCAGGATGGCTGCCTACTGTGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: SWNRTLRLAGFC*ICAGWLPTVSF Trigger: GAATGACACAGTAGGCAGCCATCCTGCACAGATGCAGCAGAAGCCGGCTAAGCGCAGAGTGCGATTCCAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 72 bp | GCTGCCTCGCAGCTGGACGGGAAGCTTTCGTTATTGTaGAGACTGTCCTGTTCAGACACTGTGGCTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: AASQLDGKLSLL*RLSCSDTVALP Trigger: GGGGAGAGCCACAGTGTCTGAACAGGACAGTCTCAACAATAACGAAAGCTTCCCGTCCAGCTGCGAGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 90 bp | GCGTGTCACTCTCCTTTCCACGCTGTCCCCCGGATGACATCCATCTaGTGGCTCTATCTGCAGACTGTATGTAGGAGGGTCGCTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: ACHSPFHAVPRMTSI*WLYLQTVCRRVAVI Trigger: GATGACAGCGACCCTCCTACATACAGTCTGCAGATAGAGCCACAAGATGGATGTCATCCGGGGGACAGCGTGGAAAGGAGAGTGACACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | TTCGCTTGGAGTGTTTTCTGCGTTCTCCGTGGGGGCTaGCTCGCAGCTGGACGGGAAGCTTTCGTTATTGTT | + |
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Preference number: 6 (lower is better) Translates to: FAWSVFCVLRGG*LAAGREAFVIV Trigger: AACAATAACGAAAGCTTCCCGTCCAGCTGCGAGGCAGCCCCCACGGAGAACGCAGAAAACACTCCAAGCGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | TGTGCTTACGTCACAGGCTTTCCTGTCACCACAGAGTaGACTCTCAGGACCAGTCTCCAAGCCAGCCTGACT | + |
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Preference number: 6 (lower is better) Translates to: CAYVTGFPVTTE*TLRTSLQASLT Trigger: AGTCAGGCTGGCTTGGAGACTGGTCCTGAGAGTGCACTCTGTGGTGACAGGAAAGCCTGTGACGTAAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 72 bp | CCTTTCCACGCTGTCCCCCGGATGACATCCATCTTGTaGCTCTATCTGCAGACTGTATGTAGGAGGGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: PFHAVPRMTSIL*LYLQTVCRRVA Trigger: AGCGACCCTCCTACATACAGTCTGCAGATAGAGCCACAAGATGGATGTCATCCGGGGGACAGCGTGGAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 72 bp | GATCCGTGCTGGGACAGGTTTCAATCTCTGGCTCTTTaGCTGCTGCTTCTGTCCCCACTGCCTCTTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: DPCWDRFQSLAL*LLLLSPLPLQT Trigger: TGTCTGAAGAGGCAGTGGGGACAGAAGCAGCAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 72 bp | CCAACCTCATCTTGCTCCAGGTTGTCGTCTATTTCCTaGAATCGCACTCTGCGCTTAGCCGGCTTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PTSSCSRLSSIS*NRTLRLAGFCC Trigger: GCAGCAGAAGCCGGCTAAGCGCAGAGTGCGATTCCAGGAAATAGACGACAACCTGGAGCAAGATGAGGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 90 bp | TCTCCACTTGGATCCGTGCTGGGACAGGTTTCAATCTCTGGCTCTTaGGCTGCTGCTTCTGTCCCCACTGCCTCTTCAGACATTATCGCC | + |
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Preference number: 6 (lower is better) Translates to: SPLGSVLGQVSISGS*AAASVPTASSDIIA Trigger: GGCGATAATGTCTGAAGAGGCAGTGGGGACAGAAGCAGCAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACGGATCCAAGTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 90 bp | ATGAGCAGGATGCAGGAACCACCACCAACCTCATCTTGCTCCAGGTaGTCGTCTATTTCCTGGAATCGCACTCTGCGCTTAGCCGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MSRMQEPPPTSSCSR*SSISWNRTLRLAGF Trigger: GAAGCCGGCTAAGCGCAGAGTGCGATTCCAGGAAATAGACGACAACCTGGAGCAAGATGAGGTTGGTGGTGGTTCCTGCATCCTGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | TCTCTATCTTCTTGGCCAGATCATCAAGGGAGAGCGTaGTCTCGTCAGGAGGCAGATCCTCCTGGAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: SLSSWPDHQGRA*SRQEADPPGDC Trigger: ACAGTCTCCAGGAGGATCTGCCTCCTGACGAGAGCACGCTCTCCCTTGATGATCTGGCCAAGAAGATAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | TGTCGGCAAAGTCCGTGCAAACAGGTGACTCAATGTTaGCCAGGGTGCAGTAGAGTGCAGTTCCTCCAACAC | + |
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Preference number: 6 (lower is better) Translates to: CRQSPCKQVTQC*PGCSRVQFLQH Trigger: GTGTTGGAGGAACTGCACTCTACTGCACCCTGGGCAACATTGAGTCACCTGTTTGCACGGACTTTGCCGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 72 bp | TCTCCTTTCCACGCTGTCCCCCGGATGACATCCATCTaGTGGCTCTATCTGCAGACTGTATGTAGGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SPFHAVPRMTSI*WLYLQTVCRRV Trigger: GACCCTCCTACATACAGTCTGCAGATAGAGCCACAAGATGGATGTCATCCGGGGGACAGCGTGGAAAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 72 bp | CTTCTGTCCCCACTGCCTCTTCAGACATTATCGCCCTaGCAAGGCTTTTCCTCTCTGGTGACGGTTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: LLSPLPLQTLSP*QGFSSLVTVPQ Trigger: CTGTGGAACCGTCACCAGAGAGGAAAAGCCTTGCAAGGGCGATAATGTCTGAAGAGGCAGTGGGGACAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 72 bp | CCTTCTGCAGGAATGGCCTCTGCGATCTCTATCTTCTaGGCCAGATCATCAAGGGAGAGCGTGCTCTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSAGMASAISIF*ARSSRESVLSS Trigger: TGACGAGAGCACGCTCTCCCTTGATGATCTGGCCAAGAAGATAGAGATCGCAGAGGCCATTCCTGCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | CGTGCTGGGACAGGTTTCAATCTCTGGCTCTTTGGCTaGTGCTTCTGTCCCCACTGCCTCTTCAGACATTAT | + |
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Preference number: 6 (lower is better) Translates to: RAGTGFNLWLFG*CFCPHCLFRHY Trigger: ATAATGTCTGAAGAGGCAGTGGGGACAGAAGCAGCAGCCAAAGAGCCAGAGATTGAAACCTGTCCCAGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | CAGTATGGACACCAGCCCTTCTGCAGGAATGGCCTCTaGGATCTCTATCTTCTTGGCCAGATCATCAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: QYGHQPFCRNGL*DLYLLGQIIKG Trigger: TCCCTTGATGATCTGGCCAAGAAGATAGAGATCGCAGAGGCCATTCCTGCAGAAGGGCTGGTGTCCATACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 72 bp | CTTACTCACTCGGTCTTCACTGTCCCGCCTTTCTTCTaGGGCCATACACACTTCCAGACACAGTGTGCTTAC | + |
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Preference number: 6 (lower is better) Translates to: LTHSVFTVPPFF*GHTHFQTQCAY Trigger: GTAAGCACACTGTGTCTGGAAGTGTGTATGGCCCCAGAAGAAAGGCGGGACAGTGAAGACCGAGTGAGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 72 bp | GATGAGCAGGATGCAGGAACCACCACCAACCTCATCTaGCTCCAGGTTGTCGTCTATTTCCTGGAATCGCAC | + |
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Preference number: 6 (lower is better) Translates to: DEQDAGTTTNLI*LQVVVYFLESH Trigger: GTGCGATTCCAGGAAATAGACGACAACCTGGAGCAAGATGAGGTTGGTGGTGGTTCCTGCATCCTGCTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS TCA 72 bp | AGACATTATCGCCCTTGCAAGGCTTTTCCTCTCTGGTaGCGGTTCCACAGGCGCTGTCTTAAGCTTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: RHYRPCKAFPLW*RFHRRCLKLGQ Trigger: TTGTCCAAGCTTAAGACAGCGCCTGTGGAACCGTCACCAGAGAGGAAAAGCCTTGCAAGGGCGATAATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | TTTCTTCTGGGGCCATACACACTTCCAGACACAGTGTaGTTACGTCACAGGCTTTCCTGTCACCACAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: FLLGPYTLPDTV*LRHRLSCHHRV Trigger: CACTCTGTGGTGACAGGAAAGCCTGTGACGTAAGCACACTGTGTCTGGAAGTGTGTATGGCCCCAGAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | GTCATTCCTCTTCTTCAGTATGGACACCAGCCCTTCTaGAGGAATGGCCTCTGCGATCTCTATCTTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VIPLLQYGHQPF*RNGLCDLYLLG Trigger: GCCAAGAAGATAGAGATCGCAGAGGCCATTCCTGCAGAAGGGCTGGTGTCCATACTGAAGAAGAGGAATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS GCA 72 bp | ATGAGCAGGATGCAGGAACCACCACCAACCTCATCTTaGTCCAGGTTGTCGTCTATTTCCTGGAATCGCACT | + |
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Preference number: 6 (lower is better) Translates to: MSRMQEPPPTSS*SRLSSISWNRT Trigger: AGTGCGATTCCAGGAAATAGACGACAACCTGGAGCAAGATGAGGTTGGTGGTGGTTCCTGCATCCTGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 72 bp | ATGCAGGAACCACCACCAACCTCATCTTGCTCCAGGTaGTCGTCTATTTCCTGGAATCGCACTCTGCGCTTA | + |
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Preference number: 6 (lower is better) Translates to: MQEPPPTSSCSR*SSISWNRTLRL Trigger: TAAGCGCAGAGTGCGATTCCAGGAAATAGACGACAACCTGGAGCAAGATGAGGTTGGTGGTGGTTCCTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CCA 72 bp | TCTTCTTCAGTATGGACACCAGCCCTTCTGCAGGAATaGCCTCTGCGATCTCTATCTTCTTGGCCAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: SSSVWTPALLQE*PLRSLSSWPDH Trigger: ATGATCTGGCCAAGAAGATAGAGATCGCAGAGGCCATTCCTGCAGAAGGGCTGGTGTCCATACTGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS TCA 72 bp | GGCGCTGTCTTAAGCTTGGACAAGAGAGGGTCTTGGTaGGTTGTGCAAATTTTAGCAAGCTGTTCAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: GAVLSLDKRGSW*VVQILASCSKS Trigger: AGATTTTGAACAGCTTGCTAAAATTTGCACAACTCACCAAGACCCTCTCTTGTCCAAGCTTAAGACAGCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 72 bp | CCATTGTTCCTGAATGGCAGAAAGATTTGCAAGCAATaGCTCATGATACAGCCTTTCAAGCTGAATAAATTT | + |
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Preference number: 6 (lower is better) Translates to: PLFLNGRKICKQ*LMIQPFKLNKF Trigger: AAATTTATTCAGCTTGAAAGGCTGTATCATGAGCAATTGCTTGCAAATCTTTCTGCCATTCAGGAACAATGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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| CDS CAA 90 bp | TTTTGTTTCCCATTGTTCCTGAATGGCAGAAAGATTTGCAAGCAATaGCTCATGATACAGCCTTTCAAGCTGAATAAATTTCATTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FCFPLFLNGRKICKQ*LMIQPFKLNKFHCF Trigger: AAAGCAATGAAATTTATTCAGCTTGAAAGGCTGTATCATGAGCAATTGCTTGCAAATCTTTCTGCCATTCAGGAACAATGGGAAACAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040706.9 |
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