Pregenerated sensors for CNR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044288

Ensembl transcript IDs: ENSMUST00000057188.7, ENSMUST00000084736.3

Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	ATCCTAGTTTGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTaGCCTGTCAGGCTGGGAACCCCAAATGGTAGAAATCACCAACAG	+
Preference number: 1 (lower is better) Translates to: ILVWPSGHTDCKKGY*PVRLGTPNGRNHQQ Trigger: CTGTTGGTGATTTCTACCATTTGGGGTTCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCAAACTAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR GCA 90 bp	GCCAAATCTAGACATATCCTAGTTTGGCCCTCAGGTCACACTGATTaGAAGAAGGGGTACTGCCCTGTCAGGCTGGGAACCCCAAATGGT	+
Preference number: 1 (lower is better) Translates to: AKSRHILVWPSGHTD*KKGYCPVRLGTPNG Trigger: ACCATTTGGGGTTCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCAAACTAGGATATGTCTAGATTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CCA 90 bp	TACTACCTTTTCCTTAGCCCAATCATTCCAAACAGAGCCAGGTACTaGGCTGTCACCCTCTGTAATGAAATGGCCTGGACCAGCTGGCAT	+
Preference number: 1 (lower is better) Translates to: YYLFLSPIIPNRARY*AVTLCNEMAWTSWH Trigger: ATGCCAGCTGGTCCAGGCCATTTCATTACAGAGGGTGACAGCCCAGTACCTGGCTCTGTTTGGAATGATTGGGCTAAGGAAAAGGTAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CCA 90 bp	AAAAGCAAGAGACTGCAGCAGGCCAAATCTAGACATATCCTAGTTTaGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTC	+
Preference number: 1 (lower is better) Translates to: KSKRLQQAKSRHILV*PSGHTDCKKGYCPV Trigger: GACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCAAACTAGGATATGTCTAGATTTGGCCTGCTGCAGTCTCTTGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 90 bp	ACTGCACAGTGGTCACAGTGTACACTAAGATTGACACATGCTGTCTaGAGAGGTCTAGTTACAGCCAACAACTGCAGGAAGTCAGAATGT	+
Preference number: 1 (lower is better) Translates to: TAQWSQCTLRLTHAV*RGLVTANNCRKSEC Trigger: ACATTCTGACTTCCTGCAGTTGTTGGCTGTAACTAGACCTCTTCAGACAGCATGTGTCAATCTTAGTGTACACTGTGACCACTGTGCAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 90 bp	CTTCCTAAAAGCAATACTTCTCTTTATTGGAAAAGGGCCCAATTCTaGGTACCACGGCAGAGATGTCATCAGAAGCTAGCCACCCTCATC	+
Preference number: 1 (lower is better) Translates to: LPKSNTSLYWKRAQF*VPRQRCHQKLATLI Trigger: GATGAGGGTGGCTAGCTTCTGATGACATCTCTGCCGTGGTACTCAGAATTGGGCCCTTTTCCAATAAAGAGAAGTATTGCTTTTAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR GCA 90 bp	AAACAGGATTTCATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTaGAAGAGCGCAGCAAGTGGTACTGTTTACCCTTGGTCAGTTTCC	+
Preference number: 1 (lower is better) Translates to: KQDFMKSSTVEAKFM*KSAASGTVYPWSVS Trigger: GGAAACTGACCAAGGGTAAACAGTACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCATGAAATCCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 90 bp	GTCAAGCAGTTTGGGAATTGGCCCCTTTTTAAGATGAGTAATGGCTaGAGAATGCATGTTCAGGACACATGTCAGAGGGAAACAGATAAC	+
Preference number: 1 (lower is better) Translates to: VKQFGNWPLFKMSNG*RMHVQDTCQRETDN Trigger: GTTATCTGTTTCCCTCTGACATGTGTCCTGAACATGCATTCTTCAGCCATTACTCATCTTAAAAAGGGGCCAATTCCCAAACTGCTTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 90 bp	TTCACTGTAAACCCCTGGGGAATGGAGTTTAAGTACCTAAACTACTaGGATGTCAGCAAACTAAGTAAGCACGGTGACAGTCACTATTTT	+
Preference number: 1 (lower is better) Translates to: FTVNPWGMEFKYLNY*DVSKLSKHGDSHYF Trigger: AAAATAGTGACTGTCACCGTGCTTACTTAGTTTGCTGACATCTCAGTAGTTTAGGTACTTAAACTCCATTCCCCAGGGGTTTACAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACTGATGACTTCTTGCTaGACGCTGGCCTTACAGAAC	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGLMTSC*TLALQN Trigger: GTTCTGTAAGGCCAGCGTTCAGCAAGAAGTCATCAG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAAACAGAGCCAGGTACTaGGCTGTCACCCTCTGTAAT	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGNRARY*AVTLCN Trigger: ATTACAGAGGGTGACAGCCCAGTACCTGGCTCTGTT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACTATTTCAGAGACTTTaGAGGATCGCCGAGCAACTG	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGLFQRL*RIAEQL Trigger: CAGTTGCTCGGCGATCCTTCAAAGTCTCTGAAATAG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACAAGGAAACAGCAACTaGACAGTGGTCACAGTGTAC	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGQGNSN*TVVTVY Trigger: GTACACTGTGACCACTGTGCAGTTGCTGTTTCCTTG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACAAGAAGAAGACAACTaGTTTTTGGCCATCGAGGCC	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGQEEDN*FLAIEA Trigger: GGCCTCGATGGCCAAAAACCAGTTGTCTTCTTCTTG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATGTTTTGGCACATCTTaGTACCAGCAAGTAGAGGAG	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGCFGTS*YQQVEE Trigger: CTCCTCTACTTGCTGGTATCAAGATGTGCCAAAACA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGTTACAGCCAACAACTaGAGGAAGTCAGAATGTCAG	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGVTANN*RKSECQ Trigger: CTGACATTCTGACTTCCTGCAGTTGTTGGCTGTAAC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACCAACTGAACAGCTGTaGTCCAGAAGATATGGAATG	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGPTEQL*SRRYGM Trigger: CATTCCATATCTTCTGGACCACAGCTGTTCAGTTGG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAATCCGGTCTCCTAGGTaGGAAGATTCTTCTGAAAAG	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGIRSPR*EDSSEK Trigger: CTTTTCAGAAGAATCTTCCCACCTAGGAGACCGGAT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAACACTCCCCTCTTCCTaGGAGAATCCTCTATTTTCT	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGTLPSS*ENPLFS Trigger: AGAAAATAGAGGATTCTCCCAGGAAGAGGGGAGTGT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAAGACACAGTAAACACTaGCACACAACTAACAGGACA	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGRHSKH*HTTNRT Trigger: TGTCCTGTTAGTTGTGTGTCAGTGTTTACTGTGTCT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATTCACTGTAAACCCCTaGGGAATGGAGTTTAAGTAC	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGFTVNP*GMEFKY Trigger: GTACTTAAACTCCATTCCCCAGGGGTTTACAGTGAA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGTTAGGCTTCAGATTTaGAAGCCAACGTTTTCCCTT	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGVRLQI*KPTFSL Trigger: AAGGGAAAACGTTGGCTTCCAAATCTGAAGCCTAAC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACTTATCGGGATAGAGTaGCTTCCTAAAAGCAATACT	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGLIGIE*LPKSNT Trigger: AGTATTGCTTTTAGGAAGCCACTCTATCCCGATAAG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGCATTACTTATTTCATaGTGGTTTTCTATGGGTAGT	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGALLIS*WFSMGS Trigger: ACTACCCATAGAAAACCACCATGAAATAAGTAATGC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGTACCTTTTATACTATaGACAGACACAGCATCATTA	+
Preference number: 2 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGVPFIL*TDTASL Trigger: TAATGATGCTGTGTCTGTCCATAGTATAAAAGGTAC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCTATTTCAGAGACTTTaGAGGATCGCCGAGCAACTG	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGLFQRL*RIAEQL Trigger: CAGTTGCTCGGCGATCCTTCAAAGTCTCTGAAATAG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAATCCAGTATCCAACTaGACAGCTGTGGTCCAGAAG	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGNPVSN*TAVVQK Trigger: CTTCTGGACCACAGCTGTTCAGTTGGATACTGGATT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCAAGGAAACAGCAACTaGACAGTGGTCACAGTGTAC	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGQGNSN*TVVTVY Trigger: GTACACTGTGACCACTGTGCAGTTGCTGTTTCCTTG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCAAGAAGAAGACAACTaGTTTTTGGCCATCGAGGCC	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGQEEDN*FLAIEA Trigger: GGCCTCGATGGCCAAAAACCAGTTGTCTTCTTCTTG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CAA 90 bp	GCTTCAGATTTGGAAGCCAACGTTTTCCCTTCTATTTCAGAGACTTaGAAGGATCGCCGAGCAACTGCAGCGATAGACTTTCTTCACTGT	+
Preference number: 2 (lower is better) Translates to: ASDLEANVFPSISET*KDRRATAAIDFLHC Trigger: ACAGTGAAGAAAGTCTATCGCTGCAGTTGCTCGGCGATCCTTCAAAGTCTCTGAAATAGAAGGGAAAACGTTGGCTTCCAAATCTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGTTACAGCCAACAACTaGAGGAAGTCAGAATGTCAG	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGVTANN*RKSECQ Trigger: CTGACATTCTGACTTCCTGCAGTTGTTGGCTGTAAC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAAGACAACTGGTTTTTaGCCATCGAGGCCTGAAATC	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGKTTGF*PSRPEI Trigger: GATTTCAGGCCTCGATGGCCAAAAACCAGTTGTCTT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTTTCACTGTAAACCCCTaGGGAATGGAGTTTAAGTAC	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGFTVNP*GMEFKY Trigger: GTACTTAAACTCCATTCCCCAGGGGTTTACAGTGAA...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGTTAGGCTTCAGATTTaGAAGCCAACGTTTTCCCTT	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGVRLQI*KPTFSL Trigger: AAGGGAAAACGTTGGCTTCCAAATCTGAAGCCTAAC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCATGGTGGTTTTCTATaGGTAGTTAGGCTTCAGATT	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGHGGFL*VVRLQI Trigger: AATCTGAAGCCTAACTACCCATAGAAAACCACCATG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGCATTACTTATTTCATaGTGGTTTTCTATGGGTAGT	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGALLIS*WFSMGS Trigger: ACTACCCATAGAAAACCACCATGAAATAAGTAATGC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGTACCTTTTATACTATaGACAGACACAGCATCATTA	+
Preference number: 2 (lower is better) Translates to: MKSSTVEAKFMCKSAASGVPFIL*TDTASL Trigger: TAATGATGCTGTGTCTGTCCATAGTATAAAAGGTAC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATGGTACTGTTTACCCTaGGTCAGTTTCCTCATGGGG	+
Preference number: 3 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGWYCLP*VSFLMG Trigger: CCCCATGAGGAAACTGACCAAGGGTAAACAGTACCA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGGACCAGCTGGCATGTaGTTACTTAACCTGAGATTG	+
Preference number: 3 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGGPAGM*LLNLRL Trigger: CAATCTCAGGTTAAGTAACAACATGCCAGCTGGTCC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR GCA 72 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTaGCCTGTCAGGCTGGGAACCCCAAATGGTAGAAAT	+
Preference number: 3 (lower is better) Translates to: WPSGHTDCKKGY*PVRLGTPNGRN Trigger: ATTTCTACCATTTGGGGTTCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR GCA 72 bp	AGACATATCCTAGTTTGGCCCTCAGGTCACACTGATTaGAAGAAGGGGTACTGCCCTGTCAGGCTGGGAACC	+
Preference number: 3 (lower is better) Translates to: RHILVWPSGHTD*KKGYCPVRLGT Trigger: GGTTCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCAAACTAGGATATGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CCA 72 bp	GAGCCAGGTACTGGGCTGTCACCCTCTGTAATGAAATaGCCTGGACCAGCTGGCATGTTGTTACTTAACCTG	+
Preference number: 3 (lower is better) Translates to: EPGTGLSPSVMK*PGPAGMLLLNL Trigger: CAGGTTAAGTAACAACATGCCAGCTGGTCCAGGCCATTTCATTACAGAGGGTGACAGCCCAGTACCTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACCTCATCTTTATGTTTaGGCACATCTTGATACCAGC	+
Preference number: 3 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGPHLYV*AHLDTS Trigger: GCTGGTATCAAGATGTGCCAAAACATAAAGATGAGG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACAATACTTCTCTTTATaGGAAAAGGGCCCAATTCTG	+
Preference number: 3 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGQYFSL*EKGPIL Trigger: CAGAATTGGGCCCTTTTCCAATAAAGAGAAGTATTG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CCA 72 bp	TTCCTTAGCCCAATCATTCCAAACAGAGCCAGGTACTaGGCTGTCACCCTCTGTAATGAAATGGCCTGGACC	+
Preference number: 3 (lower is better) Translates to: FLSPIIPNRARY*AVTLCNEMAWT Trigger: GGTCCAGGCCATTTCATTACAGAGGGTGACAGCCCAGTACCTGGCTCTGTTTGGAATGATTGGGCTAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CCA 72 bp	ACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTaGGAACCCCAAATGGTAGAAATCACCAACAGATGC	+
Preference number: 3 (lower is better) Translates to: TLIARRGTALSG*EPQMVEITNRC Trigger: GCATCTGTTGGTGATTTCTACCATTTGGGGTTCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAACAGCATCATTAAAGTaGTCGTTACAAAGGCATTAC	+
Preference number: 3 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGTASLK*SLQRHY Trigger: GTAATGCCTTTGTAACGACAACTTTAATGATGCTGT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CCA 72 bp	AGACTGCAGCAGGCCAAATCTAGACATATCCTAGTTTaGCCCTCAGGTCACACTGATTGCAAGAAGGGGTAC	+
Preference number: 3 (lower is better) Translates to: RLQQAKSRHILV*PSGHTDCKKGY Trigger: GTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCAAACTAGGATATGTCTAGATTTGGCCTGCTGCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR GCA 72 bp	CTACCAGGTCTTTGTAGCTGTGAGAAGAGATGGTACTaGCTGGTAGCTAGAGACATGTCGGTTGATATTCAG	+
Preference number: 3 (lower is better) Translates to: LPGLCSCEKRWY*LVARDMSVDIQ Trigger: CTGAATATCAACCGACATGTCTCTAGCTACCAGGCAGTACCATCTCTTCTCACAGCTACAAAGACCTGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTTCTATTTCAGAGACTTaGAAGGATCGCCGAGCAACT	+
Preference number: 3 (lower is better) Translates to: MKSSTVEAKFMCKSAASGSISET*KDRRAT Trigger: AGTTGCTCGGCGATCCTTCAAAGTCTCTGAAATAGA...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 72 bp	AGCAATACTTCTCTTTATTGGAAAAGGGCCCAATTCTaGGTACCACGGCAGAGATGTCATCAGAAGCTAGCC	+
Preference number: 3 (lower is better) Translates to: SNTSLYWKRAQF*VPRQRCHQKLA Trigger: GGCTAGCTTCTGATGACATCTCTGCCGTGGTACTCAGAATTGGGCCCTTTTCCAATAAAGAGAAGTATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR GCA 72 bp	AAACAGGGGTCACCCTGCTACATCACCACTCCTGTATaGCATAGCTCTTATGAGGGCTATATTCTGTTTTTG	+
Preference number: 3 (lower is better) Translates to: KQGSPCYITTPV*HSSYEGYILFL Trigger: CAAAAACAGAATATAGCCCTCATAAGAGCTATGGCATACAGGAGTGGTGATGTAGCAGGGTGACCCCTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 72 bp	AACCCCTGGGGAATGGAGTTTAAGTACCTAAACTACTaGGATGTCAGCAAACTAAGTAAGCACGGTGACAGT	+
Preference number: 3 (lower is better) Translates to: NPWGMEFKYLNY*DVSKLSKHGDS Trigger: ACTGTCACCGTGCTTACTTAGTTTGCTGACATCTCAGTAGTTTAGGTACTTAAACTCCATTCCCCAGGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CCA 72 bp	AATGCAATACACGTCAAGGAAACAGCAACTGCACAGTaGTCACAGTGTACACTAAGATTGACACATGCTGTC	+
Preference number: 3 (lower is better) Translates to: NAIHVKETATAQ*SQCTLRLTHAV Trigger: GACAGCATGTGTCAATCTTAGTGTACACTGTGACCACTGTGCAGTTGCTGTTTCCTTGACGTGTATTGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CCA 72 bp	TGTCATCAGAAGCTAGCCACCCTCATCTTTATGTTTTaGCACATCTTGATACCAGCAAGTAGAGGAGGTACT	+
Preference number: 3 (lower is better) Translates to: CHQKLATLIFMF*HILIPASRGGT Trigger: AGTACCTCCTCTACTTGCTGGTATCAAGATGTGCCAAAACATAAAGATGAGGGTGGCTAGCTTCTGATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 72 bp	TTTGGGAATTGGCCCCTTTTTAAGATGAGTAATGGCTaGAGAATGCATGTTCAGGACACATGTCAGAGGGAA	+
Preference number: 3 (lower is better) Translates to: FGNWPLFKMSNG*RMHVQDTCQRE Trigger: TTCCCTCTGACATGTGTCCTGAACATGCATTCTTCAGCCATTACTCATCTTAAAAAGGGGCCAATTCCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTACAGCATCATTAAAGTaGTCGTTACAAAGGCATTAC	+
Preference number: 3 (lower is better) Translates to: MKSSTVEAKFMCKSAASGTASLK*SLQRHY Trigger: GTAATGCCTTTGTAACGACAACTTTAATGATGCTGT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 72 bp	ACAGCTGTGGTCCAGAAGATATGGAATGTCCTCATATaGAAATGCAGGCCTAACACAGTTTTAAGTGTCCTT	+
Preference number: 3 (lower is better) Translates to: TAVVQKIWNVLI*KCRPNTVLSVL Trigger: AAGGACACTTAAAACTGTGTTAGGCCTGCATTTTCATATGAGGACATTCCATATCTTCTGGACCACAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 72 bp	AAGTCAAGCAGTTTGGGAATTGGCCCCTTTTTAAGATaGGTAATGGCTGAAGAATGCATGTTCAGGACACAT	+
Preference number: 3 (lower is better) Translates to: KSSSLGIGPFLR*VMAEECMFRTH Trigger: ATGTGTCCTGAACATGCATTCTTCAGCCATTACTCATCTTAAAAAGGGGCCAATTCCCAAACTGCTTGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 72 bp	TCTCTTTTCCATTCTGATTATAATCCAGTATCCAACTaGACAGCTGTGGTCCAGAAGATATGGAATGTCCTC	+
Preference number: 3 (lower is better) Translates to: SLFHSDYNPVSN*TAVVQKIWNVL Trigger: GAGGACATTCCATATCTTCTGGACCACAGCTGTTCAGTTGGATACTGGATTATAATCAGAATGGAAAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CCA 72 bp	AAGGAGAGACTCTATGTAGAACTTATCGGGATAGAGTaGCTTCCTAAAAGCAATACTTCTCTTTATTGGAAA	+
Preference number: 3 (lower is better) Translates to: KERLYVELIGIE*LPKSNTSLYWK Trigger: TTTCCAATAAAGAGAAGTATTGCTTTTAGGAAGCCACTCTATCCCGATAAGTTCTACATAGAGTCTCTCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 72 bp	ATTGGAAGAAATACTAAGGTTTCTAAAATTGTCTCATaGACAGTAATACTATCTAAACAGGGGTCACCCTGC	+
Preference number: 3 (lower is better) Translates to: IGRNTKVSKIVS*TVILSKQGSPC Trigger: GCAGGGTGACCCCTGTTTAGATAGTATTACTGTTCATGAGACAATTTTAGAAACCTTAGTATTTCTTCCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR TCA 72 bp	TACCAGTACTTGTATACAAAATATTATACAGATTACTaGCAAAGACATCACAGCAGTCTCAATGATGCTACC	+
Preference number: 3 (lower is better) Translates to: YQYLYTKYYTDY*QRHHSSLNDAT Trigger: GGTAGCATCATTGAGACTGCTGTGATGTCTTTGTCAGTAATCTGTATAATATTTTGTATACAAGTACTGGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR GCA 72 bp	AAATATACAGTCAAGAGTATGAGGAATCTAATTTTGTaGATGATGTTAGTGGTCCTGTTTATGGGTATGGAA	+
Preference number: 3 (lower is better) Translates to: KYTVKSMRNLIL*MMLVVLFMGME Trigger: TTCCATACCCATAAACAGGACCACTAACATCATGCACAAAATTAGATTCCTCATACTCTTGACTGTATATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACGGCCTTGGGCCTGGTaGCGATCCTCTTATAGGCCA	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGRPWAW*RSSYRP Trigger: TGGCCTATAAGAGGATCGTCACCAGGCCCAAGGCCG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACCGCGGCCCTGTGCATaGTGGCTGTGTTATTGGCGT	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGPRPCA*WLCYWR Trigger: ACGCCAATAACACAGCCAGCATGCACAGGGCCGCGG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAATGTCCATGCGGGCTTaGTCAGGCCGTGTCACCTGC	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGMSMRA*SGRVTC Trigger: GCAGGTGACACGGCCTGACCAAGCCCGCATGGACAT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACAGGCTGCCCACAGATaGTGTGAAGGAGGCGGTAAC	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGQAAHR*CEGGGN Trigger: GTTACCGCCTCCTTCACAGCATCTGTGGGCAGCCTG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACGAACTGCGTGGCTGTaGGCCTTCCAGAGAATGTAC	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGRTAWL*AFQRMY Trigger: GTACATTCTCTGGAAGGCTCACAGCCACGCAGTTCG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAAGACATCATACACCATaGTCGCAAGCAGAGGGCCCC	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGRHHTP*SQAEGP Trigger: GGGGCCCTCTGCTTGCGATCATGGTGTATGATGTCT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACGCAGTGCCTTCACATaGAGGGAACATGCTGCGGAA	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGRSAFT*REHAAE Trigger: TTCCGCAGCATGTTCCCTTCATGTGAAGGCACTGCG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACTTGTGCAGGCAGTCTaGGTCCCCCATGCTGTTATC	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGLVQAV*VPHAVI Trigger: GATAACAGCATGGGGGACTCAGACTGCCTGCACAAG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAACAGCGATGGCCAGCTaGTGGCTGGGATTCAGAATC	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGTAMAS*WLGFRI Trigger: GATTCTGAATCCCAGCCAGCAGCTGGCCATCGCTGT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACTGGATCATGCGAACTaGGTGGCTGTGAGCCTTCCA	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGLDHAN*VAVSLP Trigger: TGGAAGGCTCACAGCCACGCAGTTCGCATGATCCAG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATTCCACGCTGGATCATaGGAACTGCGTGGCTGTGAG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGFHAGS*ELRGCE Trigger: CTCACAGCCACGCAGTTCGCATGATCCAGCGTGGAA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACTTTCCGCGGCCCTGTaGATGCTGGCTGTGTTATTG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGLSAAL*MLAVLL Trigger: CAATAACACAGCCAGCATGCACAGGGCCGCGGAAAG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGCGATGGCCAGCTGCTaGCTGGGATTCAGAATCATG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGAMASC*LGFRIM Trigger: CATGATTCTGAATCCCAGCCAGCAGCTGGCCATCGC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAAGAGGAGGTCTGTGGTaGTGGTACGGAAGGTGGTAT	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGRGGLW*WYGRWY Trigger: ATACCACCTTCCGTACCATCACCACAGACCTCCTCT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATCCTCAGAGCATAGATaGTGGGGTTCACGGTGGAGT	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGSSEHR*WGSRWS Trigger: ACTCCACCGTGAACCCCATCATCTATGCTCTGAGGA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACAGATTGCAGCTTCTTaGAGTTCCAGCCCAGGAGAG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGQIAAS*SSSPGE Trigger: CTCTCCTGGGCTGGAACTGCAAGAAGCTGCAATCTG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACTAGAGGCTGCGCAGTaGCTTCACATGAAGGGAACA	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGLEAAQ*LHMKGT Trigger: TGTTCCCTTCATGTGAAGGCACTGCGCAGCCTCTAG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAAGTCTGAGTCCCCCATaGTGTTATCTAGAGGCTGCG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGSLSPP*CYLEAA Trigger: CGCAGCCTCTAGATAACAGCATGGGGGACTCAGACT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATGCTGGCTGTGTTATTaGCGTGCTTGTGCAGGCAGT	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGCWLCY*RACAGS Trigger: ACTGCCTGCACAAGCACGCCAATAACACAGCCAGCA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAAGCTGTAGACAAAGATaGCACTTCCCAGGAGATCGG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGSCRQR*HFPGDR Trigger: CCGATCTCCTGGGAAGTGTCATCTTTGTCTACAGCT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACGGGGAGTTGTCTCCTaGCGTCATCTTTTCTTGGAA	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGRGVVS*RHLFLE Trigger: TTCCAAGAAAAGATGACGGCAGGAGACAACTCCCCG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACCAGAGGCCTGTGAATaGATATGTACCTGTCGATGG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGPEACE*ICTCRW Trigger: CCATCGACAGGTACATATCCATTCACAGGCCTCTGG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATGTCCTCGTTCTCCTTaGACGATGAGAGAGACTTGT	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGCPRSP*TMRETC Trigger: ACAAGTCTCTCTCATCGTTCAAGGAGAACGAGGACA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGGTAGGTTTCATCAATaGGTGGGAAGATGTCTGAGC	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGGRFHQ*VGRCLS Trigger: GCTCAGACATCTTCCCACTCATTGATGAAACCTACC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACATTGGGACTATCTTTaGGGTGGAACACGTGGAAGT	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGHWDYL*GGTRGS Trigger: ACTTCCACGTGTTCCACCGCAAAGATAGTCCCAATG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGGACTATCTTTGCGGTaGAACACGTGGAAGTCAACA	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGGLSLR*NTWKST Trigger: TGTTGACTTCCACGTGTTCCACCGCAAAGATAGTCC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTACCTGTCGATGGCCGTaGGGAACAGGCTGCCCACAG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGTCRWP*GTGCPQ Trigger: CTGTGGGCAGCCTGTTCCTCACGGCCATCGACAGGT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACCATCTTCTGAGGTGTaGATGATGATGCTTTTCTGG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGPSSEV*MMMLFW Trigger: CCAGAAAAGCATCATCATTCACACCTCAGAAGATGG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATCTGAGCAAACAGATTaGAGCTTCTTGCAGTTCCAG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGSEQTD*SFLQFQ Trigger: CTGGAACTGCAAGAAGCTGCAATCTGTTTGCTCAGA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATTGATATCTTCGTACTaGATGTCATTTGAGCCCACG	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGLISSY*MSFEPT Trigger: CGTGGGCTCAAATGACATTCAGTACGAAGATATCAA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCCGCGGCCCTGTGCATaGTGGCTGTGTTATTGGCGT	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGPRPCA*WLCYWR Trigger: ACGCCAATAACACAGCCAGCATGCACAGGGCCGCGG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTATGTCCATGCGGGCTTaGTCAGGCCGTGTCACCTGC	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGMSMRA*SGRVTC Trigger: GCAGGTGACACGGCCTGACCAAGCCCGCATGGACAT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCGGAGACTGCGGGAGTaGAGGATGACACATAGCACC	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGRRLRE*RMTHST Trigger: GGTGCTATGTGTCATCCTTCACTCCCGCAGTCTCCG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGAGGGCCCCAGCAGATaGTCAACACCACCAGGATCA	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGEGPSR*STPPGS Trigger: TGATCCTGGTGGTGTTGATCATCTGCTGGGGCCCTC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAGTGGTAGGAAGGCCTaGATCGGAGACTGCGGGAGT	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGSGRKA*IGDCGS Trigger: ACTCCCGCAGTCTCCGATGCAGGCCTTCCTACCACT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCAGGCTGCCCACAGATaGTGTGAAGGAGGCGGTAAC	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGQAAHR*CEGGGN Trigger: GTTACCGCCTCCTTCACAGCATCTGTGGGCAGCCTG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAGACATCATACACCATaGTCGCAAGCAGAGGGCCCC	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGRHHTP*SQAEGP Trigger: GGGGCCCTCTGCTTGCGATCATGGTGTATGATGTCT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCGCAGTGCCTTCACATaGAGGGAACATGCTGCGGAA	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGRSAFT*REHAAE Trigger: TTCCGCAGCATGTTCCCTTCATGTGAAGGCACTGCG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCTTGTGCAGGCAGTCTaGGTCCCCCATGCTGTTATC	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGLVQAV*VPHAVI Trigger: GATAACAGCATGGGGGACTCAGACTGCCTGCACAAG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTACAGCGATGGCCAGCTaGTGGCTGGGATTCAGAATC	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGTAMAS*WLGFRI Trigger: GATTCTGAATCCCAGCCAGCAGCTGGCCATCGCTGT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACACAGCAATTACTATTaGAATAGTCCACATCAAGCA	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGHSNYY*NSPHQA Trigger: TGCTTGATGTGGACTATTGCAATAGTAATTGCTGTG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTTTCCACGCTGGATCATaGGAACTGCGTGGCTGTGAG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGFHAGS*ELRGCE Trigger: CTCACAGCCACGCAGTTCGCATGATCCAGCGTGGAA...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGCGATGGCCAGCTGCTaGCTGGGATTCAGAATCATG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGAMASC*LGFRIM Trigger: CATGATTCTGAATCCCAGCCAGCAGCTGGCCATCGC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCGGCAGACGTGTCTGTaGACACAGACATGGTCACCT	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGRQTCL*TQTWSP Trigger: AGGTGACCATGTCTGTGTCCACAGACACGTCTGCCG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAGAGGAGGTCTGTGGTaGTGGTACGGAAGGTGGTAT	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGRGGLW*WYGRWY Trigger: ATACCACCTTCCGTACCATCACCACAGACCTCCTCT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGCAACAGCACACTGGTaGCTCCGATCCAGAACATCA	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGATAHW*LRSRTS Trigger: TGATGTTCTGGATCGGAGTCACCAGTGTGCTGTTGC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTTCCTCAGAGCATAGATaGTGGGGTTCACGGTGGAGT	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGSSEHR*WGSRWS Trigger: ACTCCACCGTGAACCCCATCATCTATGCTCTGAGGA...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCAGATTGCAGCTTCTTaGAGTTCCAGCCCAGGAGAG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGQIAAS*SSSPGE Trigger: CTCTCCTGGGCTGGAACTGCAAGAAGCTGCAATCTG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGAGAATGTACATGTATaGATACACAATGAACAGCAA	+
Preference number: 4 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGENVHV*IHNEQQ Trigger: TTGCTGTTCATTGTGTATGCATACATGTACATTCTC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCTAGAGGCTGCGCAGTaGCTTCACATGAAGGGAACA	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGLEAAQ*LHMKGT Trigger: TGTTCCCTTCATGTGAAGGCACTGCGCAGCCTCTAG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAGTCTGAGTCCCCCATaGTGTTATCTAGAGGCTGCG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGSLSPP*CYLEAA Trigger: CGCAGCCTCTAGATAACAGCATGGGGGACTCAGACT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGTACTGAATGTCATTTaGGCCCACGTAGAGGAGGTC	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGVLNVI*AHVEEV Trigger: GACCTCCTCTACGTGGGCTCAAATGACATTCAGTAC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAGCTGTAGACAAAGATaGCACTTCCCAGGAGATCGG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGSCRQR*HFPGDR Trigger: CCGATCTCCTGGGAAGTGTCATCTTTGTCTACAGCT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCGGGGAGTTGTCTCCTaGCGTCATCTTTTCTTGGAA	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGRGVVS*RHLFLE Trigger: TTCCAAGAAAAGATGACGGCAGGAGACAACTCCCCG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGCCGTCATCTTTTCTTaGAAGGGACTACCCCTGAAG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGAVIFS*KGLPLK Trigger: CTTCAGGGGTAGTCCCTTCCAAGAAAAGATGACGGC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGAGTGGGAAGATGTCTaGGCAAACAGATTGCAGCTT	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGEWEDV*ANRLQL Trigger: AAGCTGCAATCTGTTTGCTCAGACATCTTCCCACTC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGGTAGGTTTCATCAATaGGTGGGAAGATGTCTGAGC	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGGRFHQ*VGRCLS Trigger: GCTCAGACATCTTCCCACTCATTGATGAAACCTACC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTATGAAGGGAACATGCTaGGGAAAGCATGTCTCAGGT	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGMKGTC*GKHVSG Trigger: ACCTGAGACATGCTTTCCGCAGCATGTTCCCTTCAT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCTGTTATCTAGAGGCTaGGCAGTGCCTTCACATGAA	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGLLSRG*AVPSHE Trigger: TTCATGTGAAGGCACTGCGCAGCCTCTAGATAACAG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGGACTATCTTTGCGGTaGAACACGTGGAAGTCAACA	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGGLSLR*NTWKST Trigger: TGTTGACTTCCACGTGTTCCACCGCAAAGATAGTCC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CAA 72 bp	GAACCAACCCCTTTACTGATTTCCATTTCCATGGACTaGATTATTAGTAGGCGCCCACCATCCTCCACACTC	+
Preference number: 4 (lower is better) Translates to: EPTPLLISISMD*IISRRPPSSTL Trigger: GAGTGTGGAGGATGGTGGGCGCCTACTAATAATCAAGTCCATGGAAATGGAAATCAGTAAAGGGGTTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTTGTATGCATACACAATaGACAGCAACAGCACACTGG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGCMHTQ*TATAHW Trigger: CCAGTGTGCTGTTGCTGTTCATTGTGTATGCATACA...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCCATCTTCTGAGGTGTaGATGATGATGCTTTTCTGG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGPSSEV*MMMLFW Trigger: CCAGAAAAGCATCATCATTCACACCTCAGAAGATGG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTATGATGATGCTTTTCTaGGTTCCACGCTGGATCATG	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGMMMLF*VPRWIM Trigger: CATGATCCAGCGTGGAACCCAGAAAAGCATCATCAT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CAA 72 bp	AAGCTAGCCACCCTCATCTTTATGTTTTGGCACATCTaGATACCAGCAAGTAGAGGAGGTACTACCTTTTCC	+
Preference number: 4 (lower is better) Translates to: KLATLIFMFWHI*IPASRGGTTFS Trigger: GGAAAAGGTAGTACCTCCTCTACTTGCTGGTATCAAGATGTGCCAAAACATAAAGATGAGGGTGGCTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTATGCCATGTCTCCTTTaGTATCTTCGTACTGAATGT	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGMPCLL*YLRTEC Trigger: ACATTCAGTACGAAGATATCAAAGGAGACATGGCAT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR TCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGTTCTCCTTGAACGATaGGAGAGACTTGTTATAGAA	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGVLLER*ERLVIE Trigger: TTCTATAACAAGTCTCTCTCATCGTTCAAGGAGAAC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR GCA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCACAGCAATTACTATTaGAATAGTCCACATCAAGCA	+
Preference number: 4 (lower is better) Translates to: MKSSTVEAKFMCKSAASGHSNYY*NSPHQA Trigger: TGCTTGATGTGGACTATTGCAATAGTAATTGCTGTG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
3UTR CAA 72 bp	CCTTTTATACTATGGACAGACACAGCATCATTAAAGTaGTCGTTACAAAGGCATTACTTATTTCATGGTGGT	+
Preference number: 4 (lower is better) Translates to: PFILWTDTASLK*SLQRHYLFHGG Trigger: ACCACCATGAAATAAGTAATGCCTTTGTAACGACAACTTTAATGATGCTGTGTCTGTCCATAGTATAAAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAAAGGCCACTACGGCCTaGGGCCTGGTGACGATCCTC	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGKATTA*GLVTIL Trigger: GAGGATCGTCACCAGGCCCAAGGCCGTAGTGGCCTT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAAATGTCCATGCGGGCTaGGTCAGGCCGTGTCACCTG	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGNVHAG*VRPCHL Trigger: CAGGTGACACGGCCTGACCAAGCCCGCATGGACATT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	CTTTCCGCGGCCCTGTGCATGCTGGCTGTGTTATTGGCGTGCTTGTaGAGGCAGTCTGAGTCCCCCATGCTGTTATCTAGAGGCTGCGCA	+
Preference number: 5 (lower is better) Translates to: LSAALCMLAVLLACL*RQSESPMLLSRGCA Trigger: TGCGCAGCCTCTAGATAACAGCATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGCGGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	ATGCAGCTTTCCGCGGCCCTGTGCATGCTGGCTGTGTTATTGGCGTaGTTGTGCAGGCAGTCTGAGTCCCCCATGCTGTTATCTAGAGGC	+
Preference number: 5 (lower is better) Translates to: MQLSAALCMLAVLLA*LCRQSESPMLLSRG Trigger: GCCTCTAGATAACAGCATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGCGGAAAGCTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGTGTTATTGGCGTGCTaGTGCAGGCAGTCTGAGTCC	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGVLLAC*CRQSES Trigger: GGACTCAGACTGCCTGCACAAGCACGCCAATAACAC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAATCTTAACAGTGCTCTaGATGCAGCTTTCCGCGGCC	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGILTVL*MQLSAA Trigger: GGCCGCGGAAAGCTGCATCAAGAGCACTGTTAAGAT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	GGATATGTACCTGTCGATGGCCGTGAGGAACAGGCTGCCCACAGATaGTGTGAAGGAGGCGGTAACCCCACCCAGTTTGAACAGAAACAC	+
Preference number: 5 (lower is better) Translates to: GYVPVDGREEQAAHR*CEGGGNPTQFEQKH Trigger: GTGTTTCTGTTCAAACTGGGTGGGGTTACCGCCTCCTTCACAGCATCTGTGGGCAGCCTGTTCCTCACGGCCATCGACAGGTACATATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	GCAGGCAGTCTGAGTCCCCCATGCTGTTATCTAGAGGCTGCGCAGTaGCTTCACATGAAGGGAACATGCTGCGGAAAGCATGTCTCAGGT	+
Preference number: 5 (lower is better) Translates to: AGSLSPPCCYLEAAQ*LHMKGTCCGKHVSG Trigger: ACCTGAGACATGCTTTCCGCAGCATGTTCCCTTCATGTGAAGGCACTGCGCAGCCTCTAGATAACAGCATGGGGGACTCAGACTGCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	TTGGCGATCTTAACAGTGCTCTTGATGCAGCTTTCCGCGGCCCTGTaGATGCTGGCTGTGTTATTGGCGTGCTTGTGCAGGCAGTCTGAG	+
Preference number: 5 (lower is better) Translates to: LAILTVLLMQLSAAL*MLAVLLACLCRQSE Trigger: CTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGCGGAAAGCTGCATCAAGAGCACTGTTAAGATCGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGACGTACTGAATGTCATTaGAGCCCACGTAGAGGAGGT	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGRTECH*SPRRGG Trigger: ACCTCCTCTACGTGGGCTCAAATGACATTCAGTACG...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATGCCGTCATCTTTTCTaGGAAGGGACTACCCCTGAA	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGCRHLF*EGTTPE Trigger: TTCAGGGGTAGTCCCTTCCAAGAAAAGATGACGGCA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAACATTGGGACTATCTTaGCGGTGGAACACGTGGAAG	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGTLGLS*RWNTWK Trigger: CTTCCACGTGTTCCACCGCAAAGATAGTCCCAATGT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAATCAGAACCAGGGTTTaGGCCAGCCTAATGTCCATG	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGIRTRV*ASLMSM Trigger: CATGGACATTAGGCTGGCCAAAACCCTGGTTCTGAT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAACAGACATGGTCACCTaGGCGATCTTAACAGTGCTC	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGTDMVT*AILTVL Trigger: GAGCACTGTTAAGATCGCCAAGGTGACCATGTCTGT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 90 bp	CATGCGGGCTTGGTCAGGCCGTGTCACCTGCACCTTGCCATCTTCTaGGGTGTGAATGATGATGCTTTTCTGGGTTCCACGCTGGATCAT	+
Preference number: 5 (lower is better) Translates to: HAGLVRPCHLHLAIF*GVNDDAFLGSTLDH Trigger: ATGATCCAGCGTGGAACCCAGAAAAGCATCATCATTCACACCTCAGAAGATGGCAAGGTGCAGGTGACACGGCCTGACCAAGCCCGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	TGCTTGTGCAGGCAGTCTGAGTCCCCCATGCTGTTATCTAGAGGCTaGGCAGTGCCTTCACATGAAGGGAACATGCTGCGGAAAGCATGT	+
Preference number: 5 (lower is better) Translates to: CLCRQSESPMLLSRG*AVPSHEGNMLRKAC Trigger: ACATGCTTTCCGCAGCATGTTCCCTTCATGTGAAGGCACTGCGCAGCCTCTAGATAACAGCATGGGGGACTCAGACTGCCTGCACAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	TGGCTGTGTTATTGGCGTGCTTGTGCAGGCAGTCTGAGTCCCCCATaGTGTTATCTAGAGGCTGCGCAGTGCCTTCACATGAAGGGAACA	+
Preference number: 5 (lower is better) Translates to: WLCYWRACAGSLSPP*CYLEAAQCLHMKGT Trigger: TGTTCCCTTCATGTGAAGGCACTGCGCAGCCTCTAGATAACAGCATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGATTGTCCTCGTTCTCCTaGAACGATGAGAGAGACTTG	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGLSSFS*NDERDL Trigger: CAAGTCTCTCTCATCGTTCAAGGAGAACGAGGACAA...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGTAACCCCACCCAGTTaGAACAGAAACACATTGGGA	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGVTPPS*NRNTLG Trigger: TCCCAATGTGTTTCTGTTCAAACTGGGTGGGGTTAC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 90 bp	TGCTGCGGAAAGCATGTCTCAGGTCCTTGCTCCTCAGAGCATAGATaGTGGGGTTCACGGTGGAGTTCAGCAGGCAGAGCATACTACAGA	+
Preference number: 5 (lower is better) Translates to: CCGKHVSGPCSSEHR*WGSRWSSAGRAYYR Trigger: TCTGTAGTATGCTCTGCCTGCTGAACTCCACCGTGAACCCCATCATCTATGCTCTGAGGAGCAAGGACCTGAGACATGCTTTCCGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAGGGAAGTATCCTAATTaGGATGCCATGTCTCCTTTG	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGGKYPN*DAMSPL Trigger: CAAAGGAGACATGGCATCCAAATTAGGATACTTCCC...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAAGGCCACTACGGCCTaGGGCCTGGTGACGATCCTC	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGKATTA*GLVTIL Trigger: GAGGATCGTCACCAGGCCCAAGGCCGTAGTGGCCTT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	TGCTGTTATCTAGAGGCTGCGCAGTGCCTTCACATGAAGGGAACATaGTGCGGAAAGCATGTCTCAGGTCCTTGCTCCTCAGAGCATAGA	+
Preference number: 5 (lower is better) Translates to: CCYLEAAQCLHMKGT*CGKHVSGPCSSEHR Trigger: TCTATGCTCTGAGGAGCAAGGACCTGAGACATGCTTTCCGCAGCATGTTCCCTTCATGTGAAGGCACTGCGCAGCCTCTAGATAACAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAATGTCCATGCGGGCTaGGTCAGGCCGTGTCACCTG	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGNVHAG*VRPCHL Trigger: CAGGTGACACGGCCTGACCAAGCCCGCATGGACATT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	TGGCCCTCAGGTCACACTGATTGCAAGAAGGGGTACTGCCCTGTCAGGCTGGGAAAGGCAAACACCGTCTaGATAAGCTTGTTCATCTTC	+
Preference number: 5 (lower is better) Translates to: WPSGHTDCKKGYCPVRLGKANTV*ISLFIF Trigger: GAAGATGAACAAGCTTATCAAGACGGTGTTTGCCTT...TCCCAGCCTGACAGGGCAGTACCCCTTCTTGCAATCAGTGTGACCTGAGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 90 bp	CTTCGTACTGAATGTCATTTGAGCCCACGTAGAGGAGGTCTGTGGTaGTGGTACGGAAGGTGGTATCTGCAAGGCCGTCTAAGATCGACT	+
Preference number: 5 (lower is better) Translates to: LRTECHLSPRRGGLW*WYGRWYLQGRLRST Trigger: AGTCGATCTTAGACGGCCTTGCAGATACCACCTTCCGTACCATCACCACAGACCTCCTCTACGTGGGCTCAAATGACATTCAGTACGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	CTTCTTGCAGTTCCAGCCCAGGAGAGGCAACACAGCAATTACTATTaGAATAGTCCACATCAAGCAAAAGGCCACTACGGCCTTGGGCCT	+
Preference number: 5 (lower is better) Translates to: LLAVPAQERQHSNYY*NSPHQAKGHYGLGP Trigger: AGGCCCAAGGCCGTAGTGGCCTTTTGCTTGATGTGGACTATTGCAATAGTAATTGCTGTGTTGCCTCTCCTGGGCTGGAACTGCAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	CATGCGAACTGCGTGGCTGTGAGCCTTCCAGAGAATGTACATGTATaGATACACAATGAACAGCAACAGCACACTGGTGACTCCGATCCA	+
Preference number: 5 (lower is better) Translates to: HANCVAVSLPENVHV*IHNEQQQHTGDSDP Trigger: TGGATCGGAGTCACCAGTGTGCTGTTGCTGTTCATTGTGTATGCATACATGTACATTCTCTGGAAGGCTCACAGCCACGCAGTTCGCATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGGAACCAACGGGGAGTaGTCTCCTGCCGTCATCTTT	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGGTNGE*SPAVIF Trigger: AAAGATGACGGCAGGAGACAACTCCCCGTTGGTTCC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGTGTTATTGGCGTGCTaGTGCAGGCAGTCTGAGTCC	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGVLLAC*CRQSES Trigger: GGACTCAGACTGCCTGCACAAGCACGCCAATAACAC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 90 bp	ATGCTTTTCTGGGTTCCACGCTGGATCATGCGAACTGCGTGGCTGTaGGCCTTCCAGAGAATGTACATGTATGCATACACAATGAACAGC	+
Preference number: 5 (lower is better) Translates to: MLFWVPRWIMRTAWL*AFQRMYMYAYTMNS Trigger: GCTGTTCATTGTGTATGCATACATGTACATTCTCTGGAAGGCTCACAGCCACGCAGTTCGCATGATCCAGCGTGGAACCCAGAAAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 90 bp	GTGAATGATGATGCTTTTCTGGGTTCCACGCTGGATCATGCGAACTaGGTGGCTGTGAGCCTTCCAGAGAATGTACATGTATGCATACAC	+
Preference number: 5 (lower is better) Translates to: VNDDAFLGSTLDHAN*VAVSLPENVHVCIH Trigger: GTGTATGCATACATGTACATTCTCTGGAAGGCTCACAGCCACGCAGTTCGCATGATCCAGCGTGGAACCCAGAAAAGCATCATCATTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTTCCCCACACTGGATGTaGTCCTCGTTCTCCTTGAAC	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGSPHWM*SSFSLN Trigger: GTTCAAGGAGAACGAGGACAACATCCAGTGTGGGGA...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTATCTTAACAGTGCTCTaGATGCAGCTTTCCGCGGCC	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGILTVL*MQLSAA Trigger: GGCCGCGGAAAGCTGCATCAAGAGCACTGTTAAGAT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 90 bp	TTTGGATGCCATGTCTCCTTTGATATCTTCGTACTGAATGTCATTTaGGCCCACGTAGAGGAGGTCTGTGGTGATGGTACGGAAGGTGGT	+
Preference number: 5 (lower is better) Translates to: FGCHVSFDIFVLNVI*AHVEEVCGDGTEGG Trigger: ACCACCTTCCGTACCATCACCACAGACCTCCTCTACGTGGGCTCAAATGACATTCAGTACGAAGATATCAAAGGAGACATGGCATCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 90 bp	GGGAGTTGTCTCCTGCCGTCATCTTTTCTTGGAAGGGACTACCCCTaGAGGAAGTTAGAGGGAATTTCTGTGGGAAGTATCCTAATTTGG	+
Preference number: 5 (lower is better) Translates to: GSCLLPSSFLGRDYP*RKLEGISVGSILIW Trigger: CCAAATTAGGATACTTCCCACAGAAATTCCCTCTAACTTCCTTCAGGGGTAGTCCCTTCCAAGAAAAGATGACGGCAGGAGACAACTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTCGTACTGAATGTCATTaGAGCCCACGTAGAGGAGGT	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGRTECH*SPRRGG Trigger: ACCTCCTCTACGTGGGCTCAAATGACATTCAGTACG...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTATCAGAACCAGGGTTTaGGCCAGCCTAATGTCCATG	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGIRTRV*ASLMSM Trigger: CATGGACATTAGGCTGGCCAAAACCCTGGTTCTGAT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTACAGACATGGTCACCTaGGCGATCTTAACAGTGCTC	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGTDMVT*AILTVL Trigger: GAGCACTGTTAAGATCGCCAAGGTGACCATGTCTGT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTTTGTCCTCGTTCTCCTaGAACGATGAGAGAGACTTG	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGLSSFS*NDERDL Trigger: CAAGTCTCTCTCATCGTTCAAGGAGAACGAGGACAA...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGTAACCCCACCCAGTTaGAACAGAAACACATTGGGA	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGVTPPS*NRNTLG Trigger: TCCCAATGTGTTTCTGTTCAAACTGGGTGGGGTTAC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTGGGAAGTATCCTAATTaGGATGCCATGTCTCCTTTG	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGGKYPN*DAMSPL Trigger: CAAAGGAGACATGGCATCCAAATTAGGATACTTCCC...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTTTGAACAGAAACACATaGGGACTATCTTTGCGGTGG	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGLNRNT*GLSLRW Trigger: CCACCGCAAAGATAGTCCCAATGTGTTTCTGTTCAA...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTACCGTCTTGATAAGCTaGTTCATCTTCCCAAAGACA	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGTVLIS*FIFPKT Trigger: TGTCTTTGGGAAGATGAACAAGCTTATCAAGACGGT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS-3UTR CAA 90 bp	ATGAAGAGCTCAACTGTAGAAGCTAAGTTCATGTGCAAGAGCGCAGCAAGTGGTAAGGCAAACACCGTCTaGATAAGCTTGTTCATCTTC	+
Preference number: 5 (lower is better) Translates to: MKSSTVEAKFMCKSAASGKANTV*ISLFIF Trigger: GAAGATGAACAAGCTTATCAAGACGGTGTTTGCCTT...ACCACTTGCTGCGCTCTTGCACATGAACTTAGCTTCTACAGTTGAGCTCTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 90 bp	GGAATTTCTGTGGGAAGTATCCTAATTTGGATGCCATGTCTCCTTTaGTATCTTCGTACTGAATGTCATTTGAGCCCACGTAGAGGAGGT	+
Preference number: 5 (lower is better) Translates to: GISVGSILIWMPCLL*YLRTECHLSPRRGG Trigger: ACCTCCTCTACGTGGGCTCAAATGACATTCAGTACGAAGATATCAAAGGAGACATGGCATCCAAATTAGGATACTTCCCACAGAAATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 90 bp	AAAATTCTCCCCACACTGGATGTTGTCCTCGTTCTCCTTGAACGATaGGAGAGACTTGTTATAGAACTCTGTAATGTTGGTTGTGTCTCC	+
Preference number: 5 (lower is better) Translates to: KILPTLDVVLVLLER*ERLVIELCNVGCVS Trigger: GGAGACACAACCAACATTACAGAGTTCTATAACAAGTCTCTCTCATCGTTCAAGGAGAACGAGGACAACATCCAGTGTGGGGAGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CCA 90 bp	TTCAGAATCATGAAGCACTCCATGTCCATAAAATTCTCCCCACACTaGATGTTGTCCTCGTTCTCCTTGAACGATGAGAGAGACTTGTTA	+
Preference number: 5 (lower is better) Translates to: FRIMKHSMSIKFSPH*MLSSFSLNDERDLL Trigger: TAACAAGTCTCTCTCATCGTTCAAGGAGAACGAGGACAACATCCAGTGTGGGGAGAATTTTATGGACATGGAGTGCTTCATGATTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CCA 72 bp	AGCTTTCCGCGGCCCTGTGCATGCTGGCTGTGTTATTaGCGTGCTTGTGCAGGCAGTCTGAGTCCCCCATGC	+
Preference number: 6 (lower is better) Translates to: SFPRPCACWLCY*RACAGSLSPPC Trigger: GCATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGCGGAAAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	CAGCTTTCCGCGGCCCTGTGCATGCTGGCTGTGTTATaGGCGTGCTTGTGCAGGCAGTCTGAGTCCCCCATG	+
Preference number: 6 (lower is better) Translates to: QLSAALCMLAVL*ACLCRQSESPM Trigger: CATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGCGGAAAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 90 bp	GGGCCCCAGCAGATGATCAACACCACCAGGATCAGAACCAGGGTTTaGGCCAGCCTAATGTCCATGCGGGCTTGGTCAGGCCGTGTCACC	+
Preference number: 6 (lower is better) Translates to: GPQQMINTTRIRTRV*ASLMSMRAWSGRVT Trigger: GGTGACACGGCCTGACCAAGCCCGCATGGACATTAGGCTGGCCAAAACCCTGGTTCTGATCCTGGTGGTGTTGATCATCTGCTGGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	CCTGTCGATGGCCGTGAGGAACAGGCTGCCCACAGATaGTGTGAAGGAGGCGGTAACCCCACCCAGTTTGAA	+
Preference number: 6 (lower is better) Translates to: PVDGREEQAAHR*CEGGGNPTQFE Trigger: TTCAAACTGGGTGGGGTTACCGCCTCCTTCACAGCATCTGTGGGCAGCCTGTTCCTCACGGCCATCGACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	TCCGCGGCCCTGTGCATGCTGGCTGTGTTATTGGCGTaGTTGTGCAGGCAGTCTGAGTCCCCCATGCTGTTA	+
Preference number: 6 (lower is better) Translates to: SAALCMLAVLLA*LCRQSESPMLL Trigger: TAACAGCATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 90 bp	CAGCTTTCCGCGGCCCTGTGCATGCTGGCTGTGTTATTGGCGTGCTaGTGCAGGCAGTCTGAGTCCCCCATGCTGTTATCTAGAGGCTGC	+
Preference number: 6 (lower is better) Translates to: QLSAALCMLAVLLAC*CRQSESPMLLSRGC Trigger: GCAGCCTCTAGATAACAGCATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGCGGAAAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 90 bp	CACAGAGCCTCGGCAGACGTGTCTGTGGACACAGACATGGTCACCTaGGCGATCTTAACAGTGCTCTTGATGCAGCTTTCCGCGGCCCTG	+
Preference number: 6 (lower is better) Translates to: HRASADVSVDTDMVT*AILTVLLMQLSAAL Trigger: CAGGGCCGCGGAAAGCTGCATCAAGAGCACTGTTAAGATCGCCAAGGTGACCATGTCTGTGTCCACAGACACGTCTGCCGAGGCTCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	AACCAGGGTTTTGGCCAGCCTAATGTCCATGCGGGCTaGGTCAGGCCGTGTCACCTGCACCTTGCCATCTTC	+
Preference number: 6 (lower is better) Translates to: NQGFGQPNVHAG*VRPCHLHLAIF Trigger: GAAGATGGCAAGGTGCAGGTGACACGGCCTGACCAAGCCCGCATGGACATTAGGCTGGCCAAAACCCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	GCGGCCCTGTGCATGCTGGCTGTGTTATTGGCGTGCTaGTGCAGGCAGTCTGAGTCCCCCATGCTGTTATCT	+
Preference number: 6 (lower is better) Translates to: AALCMLAVLLAC*CRQSESPMLLS Trigger: AGATAACAGCATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 90 bp	CTCTTGATGCAGCTTTCCGCGGCCCTGTGCATGCTGGCTGTGTTATaGGCGTGCTTGTGCAGGCAGTCTGAGTCCCCCATGCTGTTATCT	+
Preference number: 6 (lower is better) Translates to: LLMQLSAALCMLAVL*ACLCRQSESPMLLS Trigger: AGATAACAGCATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGCGGAAAGCTGCATCAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	GAGGCTGCGCAGTGCCTTCACATGAAGGGAACATGCTaGGGAAAGCATGTCTCAGGTCCTTGCTCCTCAGAG	+
Preference number: 6 (lower is better) Translates to: EAAQCLHMKGTC*GKHVSGPCSSE Trigger: CTCTGAGGAGCAAGGACCTGAGACATGCTTTCCGCAGCATGTTCCCTTCATGTGAAGGCACTGCGCAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	AGGCAGTCTGAGTCCCCCATGCTGTTATCTAGAGGCTaGGCAGTGCCTTCACATGAAGGGAACATGCTGCGG	+
Preference number: 6 (lower is better) Translates to: RQSESPMLLSRG*AVPSHEGNMLR Trigger: CCGCAGCATGTTCCCTTCATGTGAAGGCACTGCGCAGCCTCTAGATAACAGCATGGGGGACTCAGACTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 72 bp	ACATCAAGCAAAAGGCCACTACGGCCTTGGGCCTGGTaGCGATCCTCTTATAGGCCAGAGGCCTGTGAATGG	+
Preference number: 6 (lower is better) Translates to: TSSKRPLRPWAW*RSSYRPEACEW Trigger: CCATTCACAGGCCTCTGGCCTATAAGAGGATCGTCACCAGGCCCAAGGCCGTAGTGGCCTTTTGCTTGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	TATTGGCGTGCTTGTGCAGGCAGTCTGAGTCCCCCATaGTGTTATCTAGAGGCTGCGCAGTGCCTTCACATG	+
Preference number: 6 (lower is better) Translates to: YWRACAGSLSPP*CYLEAAQCLHM Trigger: CATGTGAAGGCACTGCGCAGCCTCTAGATAACAGCATGGGGGACTCAGACTGCCTGCACAAGCACGCCAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	TTAACAGTGCTCTTGATGCAGCTTTCCGCGGCCCTGTaGATGCTGGCTGTGTTATTGGCGTGCTTGTGCAGG	+
Preference number: 6 (lower is better) Translates to: LTVLLMQLSAAL*MLAVLLACLCR Trigger: CCTGCACAAGCACGCCAATAACACAGCCAGCATGCACAGGGCCGCGGAAAGCTGCATCAAGAGCACTGTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	CAGATGATCAACACCACCAGGATCAGAACCAGGGTTTaGGCCAGCCTAATGTCCATGCGGGCTTGGTCAGGC	+
Preference number: 6 (lower is better) Translates to: QMINTTRIRTRV*ASLMSMRAWSG Trigger: GCCTGACCAAGCCCGCATGGACATTAGGCTGGCCAAAACCCTGGTTCTGATCCTGGTGGTGTTGATCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	ACAGACATGGTCACCTTGGCGATCTTAACAGTGCTCTaGATGCAGCTTTCCGCGGCCCTGTGCATGCTGGCT	+
Preference number: 6 (lower is better) Translates to: TDMVTLAILTVL*MQLSAALCMLA Trigger: AGCCAGCATGCACAGGGCCGCGGAAAGCTGCATCAAGAGCACTGTTAAGATCGCCAAGGTGACCATGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	CTGAGTCCCCCATGCTGTTATCTAGAGGCTGCGCAGTaGCTTCACATGAAGGGAACATGCTGCGGAAAGCAT	+
Preference number: 6 (lower is better) Translates to: LSPPCCYLEAAQ*LHMKGTCCGKH Trigger: ATGCTTTCCGCAGCATGTTCCCTTCATGTGAAGGCACTGCGCAGCCTCTAGATAACAGCATGGGGGACTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 90 bp	TCTGTGGACACAGACATGGTCACCTTGGCGATCTTAACAGTGCTCTaGATGCAGCTTTCCGCGGCCCTGTGCATGCTGGCTGTGTTATTG	+
Preference number: 6 (lower is better) Translates to: SVDTDMVTLAILTVL*MQLSAALCMLAVLL Trigger: CAATAACACAGCCAGCATGCACAGGGCCGCGGAAAGCTGCATCAAGAGCACTGTTAAGATCGCCAAGGTGACCATGTCTGTGTCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 72 bp	GAATGTCATTTGAGCCCACGTAGAGGAGGTCTGTGGTaGTGGTACGGAAGGTGGTATCTGCAAGGCCGTCTA	+
Preference number: 6 (lower is better) Translates to: ECHLSPRRGGLW*WYGRWYLQGRL Trigger: TAGACGGCCTTGCAGATACCACCTTCCGTACCATCACCACAGACCTCCTCTACGTGGGCTCAAATGACATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	TCGGCAGACGTGTCTGTGGACACAGACATGGTCACCTaGGCGATCTTAACAGTGCTCTTGATGCAGCTTTCC	+
Preference number: 6 (lower is better) Translates to: SADVSVDTDMVT*AILTVLLMQLS Trigger: GGAAAGCTGCATCAAGAGCACTGTTAAGATCGCCAAGGTGACCATGTCTGTGTCCACAGACACGTCTGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 90 bp	GCTGTGAAGGAGGCGGTAACCCCACCCAGTTTGAACAGAAACACATaGGGACTATCTTTGCGGTGGAACACGTGGAAGTCAACAAAGCTG	+
Preference number: 6 (lower is better) Translates to: AVKEAVTPPSLNRNT*GLSLRWNTWKSTKL Trigger: CAGCTTTGTTGACTTCCACGTGTTCCACCGCAAAGATAGTCCCAATGTGTTTCTGTTCAAACTGGGTGGGGTTACCGCCTCCTTCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	GATGCTTTTCTGGGTTCCACGCTGGATCATGCGAACTaGGTGGCTGTGAGCCTTCCAGAGAATGTACATGTA	+
Preference number: 6 (lower is better) Translates to: DAFLGSTLDHAN*VAVSLPENVHV Trigger: TACATGTACATTCTCTGGAAGGCTCACAGCCACGCAGTTCGCATGATCCAGCGTGGAACCCAGAAAAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	ATGTTGGTTGTGTCTCCTGCTGGAACCAACGGGGAGTaGTCTCCTGCCGTCATCTTTTCTTGGAAGGGACTA	+
Preference number: 6 (lower is better) Translates to: MLVVSPAGTNGE*SPAVIFSWKGL Trigger: TAGTCCCTTCCAAGAAAAGATGACGGCAGGAGACAACTCCCCGTTGGTTCCAGCAGGAGACACAACCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	GAGGCGGTAACCCCACCCAGTTTGAACAGAAACACATaGGGACTATCTTTGCGGTGGAACACGTGGAAGTCA	+
Preference number: 6 (lower is better) Translates to: EAVTPPSLNRNT*GLSLRWNTWKS Trigger: TGACTTCCACGTGTTCCACCGCAAAGATAGTCCCAATGTGTTTCTGTTCAAACTGGGTGGGGTTACCGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	GTTCCAGCCCAGGAGAGGCAACACAGCAATTACTATTaGAATAGTCCACATCAAGCAAAAGGCCACTACGGC	+
Preference number: 6 (lower is better) Translates to: VPAQERQHSNYY*NSPHQAKGHYG Trigger: GCCGTAGTGGCCTTTTGCTTGATGTGGACTATTGCAATAGTAATTGCTGTGTTGCCTCTCCTGGGCTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	TCATCAATGAGTGGGAAGATGTCTGAGCAAACAGATTaGAGCTTCTTGCAGTTCCAGCCCAGGAGAGGCAAC	+
Preference number: 6 (lower is better) Translates to: SSMSGKMSEQTD*SFLQFQPRRGN Trigger: GTTGCCTCTCCTGGGCTGGAACTGCAAGAAGCTGCAATCTGTTTGCTCAGACATCTTCCCACTCATTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	AGTGGGAAGATGTCTGAGCAAACAGATTGCAGCTTCTaGCAGTTCCAGCCCAGGAGAGGCAACACAGCAATT	+
Preference number: 6 (lower is better) Translates to: SGKMSEQTDCSF*QFQPRRGNTAI Trigger: AATTGCTGTGTTGCCTCTCCTGGGCTGGAACTGCAAGAAGCTGCAATCTGTTTGCTCAGACATCTTCCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	CTTGTTATAGAACTCTGTAATGTTGGTTGTGTCTCCTaGTGGAACCAACGGGGAGTTGTCTCCTGCCGTCAT	+
Preference number: 6 (lower is better) Translates to: LVIELCNVGCVS*WNQRGVVSCRH Trigger: ATGACGGCAGGAGACAACTCCCCGTTGGTTCCAGCAGGAGACACAACCAACATTACAGAGTTCTATAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS GCA 72 bp	TGCGTGGCTGTGAGCCTTCCAGAGAATGTACATGTATaGATACACAATGAACAGCAACAGCACACTGGTGAC	+
Preference number: 6 (lower is better) Translates to: CVAVSLPENVHV*IHNEQQQHTGD Trigger: GTCACCAGTGTGCTGTTGCTGTTCATTGTGTATGCATACATGTACATTCTCTGGAAGGCTCACAGCCACGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 90 bp	AGCAGGCAGAGCATACTACAGAAGGCAAACACCGTCTTGATAAGCTaGTTCATCTTCCCAAAGACATCATACACCATGATCGCAAGCAGA	+
Preference number: 6 (lower is better) Translates to: SRQSILQKANTVLIS*FIFPKTSYTMIASR Trigger: TCTGCTTGCGATCATGGTGTATGATGTCTTTGGGAAGATGAACAAGCTTATCAAGACGGTGTTTGCCTTCTGTAGTATGCTCTGCCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 90 bp	GTGGAGTTCAGCAGGCAGAGCATACTACAGAAGGCAAACACCGTCTaGATAAGCTTGTTCATCTTCCCAAAGACATCATACACCATGATC	+
Preference number: 6 (lower is better) Translates to: VEFSRQSILQKANTV*ISLFIFPKTSYTMI Trigger: GATCATGGTGTATGATGTCTTTGGGAAGATGAACAAGCTTATCAAGACGGTGTTTGCCTTCTGTAGTATGCTCTGCCTGCTGAACTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS TCA 72 bp	CCCACACTGGATGTTGTCCTCGTTCTCCTTGAACGATaGGAGAGACTTGTTATAGAACTCTGTAATGTTGGT	+
Preference number: 6 (lower is better) Translates to: PTLDVVLVLLER*ERLVIELCNVG Trigger: ACCAACATTACAGAGTTCTATAACAAGTCTCTCTCATCGTTCAAGGAGAACGAGGACAACATCCAGTGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	AGCAGGCAGAGCATACTACAGAAGGCAAACACCGTCTaGATAAGCTTGTTCATCTTCCCAAAGACATCATAC	+
Preference number: 6 (lower is better) Translates to: SRQSILQKANTV*ISLFIFPKTSY Trigger: GTATGATGTCTTTGGGAAGATGAACAAGCTTATCAAGACGGTGTTTGCCTTCTGTAGTATGCTCTGCCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3
CDS CAA 72 bp	AGCATACTACAGAAGGCAAACACCGTCTTGATAAGCTaGTTCATCTTCCCAAAGACATCATACACCATGATC	+
Preference number: 6 (lower is better) Translates to: SILQKANTVLIS*FIFPKTSYTMI Trigger: GATCATGGTGTATGATGTCTTTGGGAAGATGAACAAGCTTATCAAGACGGTGTTTGCCTTCTGTAGTATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057188.7 ENSMUST00000084736.3

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu