Pregenerated sensors for CNPY3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023973Ensembl transcript IDs: ENSMUST00000059844.13, ENSMUST00000121671.2, ENSMUST00000129200.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGAAGAGAATGCTTGGTGGAAGGAAGAGGCAGGCCTGGCTGCTaGGGCTGCACGGAGTCCTTCCTGGCTGAAGGGGGCGCTGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: SRRECLVEGRGRPGC*GCTESFLAEGGAGE Trigger: CTCACCAGCGCCCCCTTCAGCCAGGAAGGACTCCGTGCAGCCTCAGCAGCCAGGCCTGCCTCTTCCTTCCACCAAGCATTCTCTTCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR CCA 90 bp | GCCTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTaGGGATGCTGGGTGGACCCCGGAGCTCGTGAGGGGGACTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: ASCSSASMSGAWISA*GCWVDPGAREGDCV Trigger: TACACAGTCCCCCTCACGAGCTCCGGGGTCCACCCAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR CCA 90 bp | AAGGAAGAGGCAGGCCTGGCTGCTGAGGCTGCACGGAGTCCTTCCTaGCTGAAGGGGGCGCTGGTGAGCATCTTATGTGCCTCATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: KEEAGLAAEAARSPS*LKGALVSILCASCS Trigger: AGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCCTTCAGCCAGGAAGGACTCCGTGCAGCCTCAGCAGCCAGGCCTGCCTCTTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR CCA 90 bp | AGCATCTTATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGAGCCTaGATCTCAGCCTGGGGATGCTGGGTGGACCCCGGAGCTCGTGAG | + |
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Preference number: 1 (lower is better) Translates to: SILCASCSSASMSGA*ISAWGCWVDPGARE Trigger: CTCACGAGCTCCGGGGTCCACCCAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGCACATAAGATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR CCA 90 bp | GACCACCGCTCTGCTAGGCAACTCGTGTCCTTTCCCTTCAGCACGTaGTTGGCACAGAGGAATTCAGTCAGGTCTTCCTCCTGGTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: DHRSARQLVSFPFST*LAQRNSVRSSSWWF Trigger: GAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGTGCCAACCACGTGCTGAAGGGAAAGGACACGAGTTGCCTAGCAGAGCGGTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR GCA 90 bp | TCTTCTTGGATTTCTTCCCTCCCAGGGAGGCTATGTCCCCCTTCTTaGCAGACCACCGCTCTGCTAGGCAACTCGTGTCCTTTCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: SSWISSLPGRLCPPS*QTTALLGNSCPFPS Trigger: TGAAGGGAAAGGACACGAGTTGCCTAGCAGAGCGGTGGTCTGGCAAGAAGGGGGACATAGCCTCCCTGGGAGGGAAGAAATCCAAGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR TCA 90 bp | TTCCACCAGCACGTCACACTGCTTCTTGAGGTCAGCCACCTCTGCTaGGGTCTCGTTCCACAGCTCATAGGGGATATCCATCACCACCTT | + |
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Preference number: 1 (lower is better) Translates to: FHQHVTLLLEVSHLC*GLVPQLIGDIHHHL Trigger: AAGGTGGTGATGGATATCCCCTATGAGCTGTGGAACGAGACCTCAGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGACGTGCTGGTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR TCA 90 bp | ATCCCATTACAGATAGTTGTGAGCCACCATGTGATTGCTGGGAACTaGACTCATGACCTCTGGAAAGCACAACCAGTGCTCTTAACCCCT | + |
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Preference number: 1 (lower is better) Translates to: IPLQIVVSHHVIAGN*THDLWKAQPVLLTP Trigger: AGGGGTTAAGAGCACTGGTTGTGCTTTCCAGAGGTCATGAGTTCAGTTCCCAGCAATCACATGGTGGCTCACAACTATCTGTAATGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
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| 3UTR CCA 90 bp | ATTACAGTTATGAAACAGCATCGAAATAATTTTATGGTGTGTGTGTaGGGGCGTGGGAGTCACCACAACAGAAGGAACTGTATTAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: ITVMKQHRNNFMVCV*GRGSHHNRRNCIKG Trigger: CCCCTTAATACAGTTCCTTCTGTTGTGGTGACTCCCACGCCCCCACACACACACCATAAAATTATTTCGATGCTGTTTCATAACTGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| 3UTR-3UTR GCA 90 bp | AGGTGCCCTCTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTCCTTGCTGGAGCTaGGCTGCGCTGCGCTGTGCG | + |
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Preference number: 2 (lower is better) Translates to: RCPLCSLWRGSGSGVQPLCPCWS*AALRCA Trigger: CGCACAGCGCAGCGCAGCGCAGCTCCAGCAAGGACA...AAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAGAGGGCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR CAA 90 bp | GGGCACAGCCAAGGGAGGAGACCTGATGCTGGACAGCAGCTGTCCTaGCTGGAGCTGCGCTGCGCTGCGCTGTGCGTGTCCCAAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GHSQGRRPDAGQQLS*LELRCAALCVSQAL Trigger: CAGAGCTTGGGACACGCACAGCGCAGCGCAGCGCAGCTCCAGCAAGGACAGCTGCTGTCCAGCATCAGGTCTCCTCCCTTGGCTGTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTGCCACACCCGAGTTGCCTGGATCTCAGCCTaGGGATGCTGGGTGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: SLAWLWLWRPAPLCHTRVAWISA*GCWVDP Trigger: GGGGTCCACCCAGCATCCCCAGGCTGAGATCCAGGC...AACTCGGGTGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGGGCTGGGCAGAGCATGAGGCGTCCTCAGGAGGAGTGGGTGGACACGGGCGTCCAGCCCCTTTGTaGCACACCCGAGTTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: EKGWAEHEASSGGVGGHGRPAPL*HTRVCP Trigger: AGGACAAACTCGGGTGTGGCACAAAGGGGCTGGACG...CCCGTGTCCACCCACTCCTCCTGAGGACGCCTCATGCTCTGCCCAGCCCTTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGCTATGTCCCCCTTCTTGCCAGACCACCGCTCTGCTAGGCAACTCGTGCGCTGCGCTGCGCTGTaGGTGTCCCAAGCTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: REAMSPFLPDHRSARQLVRCAAL*VSQALK Trigger: CTTCAGAGCTTGGGACACGCACAGCGCAGCGCAGCG...CACGAGTTGCCTAGCAGAGCGGTGGTCTGGCAAGAAGGGGGACATAGCCTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | GATGAGGGGACACTCTGGAGGCTGATGAGGACCCAGGAACCAAACCGAAAGGCCTTGCTGGAGCTGCGCTaGGCTGCGCTGTGCGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: DEGTLWRLMRTQEPNRKALLELR*AALCVS Trigger: GGACACGCACAGCGCAGCGCAGCGCAGCTCCAGCAA...GGCCTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCCCTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGGCTGGGCAGAGCATGAGGCGTCCTCAGGAGGAGTGGGTGGACACGGGACCCAGTTCCTTCCTCTaGTTGCTGCTGCCACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RRAGQSMRRPQEEWVDTGPSSFL*LLLPLE Trigger: CTCCAGTGGCAGCAGCAAGCAGAGGAAGGAACTGGG...TCCCGTGTCCACCCACTCCTCCTGAGGACGCCTCATGCTCTGCCCAGCCCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAAGGGGCACAGCCAAGGGAGGAGACCTGATGCTGGACAGCAGCTGTCCTGCACGGAGTCCTTCCTaGCTGAAGGGGGCGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: KERGTAKGGDLMLDSSCPARSPS*LKGALV Trigger: CACCAGCGCCCCCTTCAGCCAGGAAGGACTCCGTGC...AGGACAGCTGCTGTCCAGCATCAGGTCTCCTCCCTTGGCTGTGCCCCTTTCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR TCA 90 bp | CTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGATGCTGGGGCTGGGCAGAGCATaGGGCGTCCTCAGGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LMLFSFHVRSLDLSLGMLGLGRA*GVLRRS Trigger: ACTCCTCCTGAGGACGCCTCATGCTCTGCCCAGCCC...CAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTTAAGCCTCCAATGATGGTGATGGCCTTCCAGCCCCTGGGATTGGGGGACCGCTGCGCTGCGCTGTaGGTGTCCCAAGCTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: QVKPPMMVMAFQPLGLGDRCAAL*VSQALK Trigger: CTTCAGAGCTTGGGACACGCACAGCGCAGCGCAGCG...GTCCCCCAATCCCAGGGGCTGGAAGGCCATCACCATCATTGGAGGCTTAACCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | ACCGAAAGGCCAAAAGGTGTTTACTCTGGTAGCCCTGGGAGAAGGGCTGGGCAGTTGCTGGAGCTGCGCTaGGCTGCGCTGTGCGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: TERPKGVYSGSPGRRAGQLLELR*AALCVS Trigger: GGACACGCACAGCGCAGCGCAGCGCAGCTCCAGCAA...CTGCCCAGCCCTTCTCCCAGGGCTACCAGAGTAAACACCTTTTGGCCTTTCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAAGGGGCACAGCCAAGGGAGGAGACCTGATGCTGGACAGCAGCTGTCCTAGGAAGAGGCAGGCCTaGCTGCTGAGGCTGCACGGA | + |
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Preference number: 2 (lower is better) Translates to: KERGTAKGGDLMLDSSCPRKRQA*LLRLHG Trigger: TCCGTGCAGCCTCAGCAGCCAGGCCTGCCTCTTCCT...AGGACAGCTGCTGTCCAGCATCAGGTCTCCTCCCTTGGCTGTGCCCCTTTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCGCTGGTGAGCATCTTATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGGCGTGGCTCTGGCTCTaGCGTCCAGCCCCTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GGAGEHLMCLMLFSFHVRAWLWL*RPAPLC Trigger: GCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGC...CCTGACATGGAAGCTGAAGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGATGCTGCCCTGGGAGAAGGGCTaGGCAGAGCATGAGGCGTCC | + |
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Preference number: 2 (lower is better) Translates to: LMLFSFHVRSLDLSLGMLPWEKG*AEHEAS Trigger: GGACGCCTCATGCTCTGCCCAGCCCTTCTCCCAGGG...CAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGATGCTGAGGAAGAGGCAGGCCTaGCTGCTGAGGCTGCACGGA | + |
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Preference number: 2 (lower is better) Translates to: LMLFSFHVRSLDLSLGMLRKRQA*LLRLHG Trigger: TCCGTGCAGCCTCAGCAGCCAGGCCTGCCTCTTCCT...CAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTGCCACAGAAGAGAATGCTTGGTaGAAGGAAGAGGCAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LCSLWRGSGSGVQPLCATEENAW*KEEAGL Trigger: CAGGCCTGCCTCTTCCTTCCACCAAGCATTCTCTTC...TGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR CAA 90 bp | TTGCTGCTGCCACTGGAGGAGCCCTTGACTCCGCTGCGCTTCTTCTaGGATTTCTTCCCTCCCAGGGAGGCTATGTCCCCCTTCTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LLLPLEEPLTPLRFF*DFFPPREAMSPFLP Trigger: TGGCAAGAAGGGGGACATAGCCTCCCTGGGAGGGAAGAAATCCAAGAAGAAGCGCAGCGGAGTCAAGGGCTCCTCCAGTGGCAGCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGCGCTGGTGAGCATCTTATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGCCAAGGGAGGAGACCTaGTGCTGGACAGCAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: GGAGEHLMCLMLFSFHVRPREET*CWTAAV Trigger: GACAGCTGCTGTCCAGCATCAGGTCTCCTCCCTTGG...CCTGACATGGAAGCTGAAGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGCTCTTCCCTTTGGGGTaGCGTCTCCCAGCACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: YVPHALQLPCQEPGSQPGLFPLG*RLPAPQ Trigger: CTGGGGTGCTGGGAGACGGCACCCCAAAGGGAAGAG...CCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGCACATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | GATGAGGGGACACTCTGGAGGCTGATGAGGACCCAGGAACCAAACCGAAAGGCCGTTCCTTCCTCTGCTTaGTGCTGCCACTGGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: DEGTLWRLMRTQEPNRKAVPSSA*CCHWRS Trigger: GCTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGGAAC...GGCCTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCCCTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAATGATGGTGATGGCCTTCCAGCCCCTGGGATTGGGGGACAAAGGCAAAAAGCCTGGATCTCAGCCTaGGGATGCTGGGTGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: SNDGDGLPAPGIGGQRQKAWISA*GCWVDP Trigger: GGGGTCCACCCAGCATCCCCAGGCTGAGATCCAGGC...TTTTTGCCTTTGTCCCCCAATCCCAGGGGCTGGAAGGCCATCACCATCATTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAATGATGGTGATGGCCTTCCAGCCCCTGGGATTGGGGGACAAAGGCAAAAACCCTGGGAGAAGGGCTaGGCAGAGCATGAGGCGTCC | + |
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Preference number: 2 (lower is better) Translates to: SNDGDGLPAPGIGGQRQKPWEKG*AEHEAS Trigger: GGACGCCTCATGCTCTGCCCAGCCCTTCTCCCAGGG...TTTTTGCCTTTGTCCCCCAATCCCAGGGGCTGGAAGGCCATCACCATCATTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGTCAGCCACCTCTGCTaGGGTCTCGTTCCACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: YVPHALQLPCQEPGSQPGVSHLC*GLVPQL Trigger: GAGCTGTGGAACGAGACCTCAGCAGAGGTGGCTGAC...CCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGCACATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGGCTGGGCAGAGCATGAGGCGTCCTCAGGAGGAGTGGGTGGACACGGGAGGTGAGCATCTTATGTaGCTCATGCTCTTCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RRAGQSMRRPQEEWVDTGGEHLM*LMLFSF Trigger: GAAGCTGAAGAGCATGAGGCACATAAGATGCTCACC...TCCCGTGTCCACCCACTCCTCCTGAGGACGCCTCATGCTCTGCCCAGCCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACACTCTGGAGGCTGATGAGGACCCAGGAACCAAACCGAAAGGCCAAAAGGTCCATGTCAGGAGCCTaGATCTCAGCCTGGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: GTLWRLMRTQEPNRKAKRSMSGA*ISAWGC Trigger: GCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGA...CCTTTTGGCCTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGATGCTGGGTTCCATGTCAGGAGCCTaGATCTCAGCCTGGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: MLFSFHVRSLDLSLGMLGSMSGA*ISAWGC Trigger: GCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGA...ACCCAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | GACCCCGGAGCTCGTGAGGGGGACTGTGTAGAAAGAGAGCTGCCTTCTGCTCCTAGGTCTTCCTCCTGGTaGTTCCTGTACCAGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: DPGAREGDCVERELPSAPRSSSW*FLYQSS Trigger: TGAGGACTGGTACAGGAACCACCAGGAGGAAGACCT...AGGAGCAGAAGGCAGCTCTCTTTCTACACAGTCCCCCTCACGAGCTCCGGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCCACTGGAGGAGCCCTTGACTCCGCTGCGCTTCTTCTTGGATTTCTTCGTCAGGTCTTCCTCCTaGTGGTTCCTGTACCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLPLEEPLTPLRFFLDFFVRSSS*WFLYQS Trigger: GGACTGGTACAGGAACCACCAGGAGGAAGACCTGAC...GAAGAAATCCAAGAAGAAGCGCAGCGGAGTCAAGGGCTCCTCCAGTGGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGATGCTGCGCTGCGCTTCTTCTTaGATTTCTTCCCTCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LMLFSFHVRSLDLSLGMLRCASS*ISSLPG Trigger: CCCTGGGAGGGAAGAAATCCAAGAAGAAGCGCAGCG...CAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR CAA 90 bp | TTCTTCTTGGATTTCTTCCCTCCCAGGGAGGCTATGTCCCCCTTCTaGCCAGACCACCGCTCTGCTAGGCAACTCGTGTCCTTTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: FFLDFFPPREAMSPF*PDHRSARQLVSFPF Trigger: GAAGGGAAAGGACACGAGTTGCCTAGCAGAGCGGTGGTCTGGCAAGAAGGGGGACATAGCCTCCCTGGGAGGGAAGAAATCCAAGAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAATGATGGTGATGGCCTTCCAGCCCCTGGGATTGGGGGACAAAGGCAAAAACGTCACACTGCTTCTTaGGGTCAGCCACCTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SNDGDGLPAPGIGGQRQKRHTAS*GQPPLL Trigger: CAGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGACG...TTTTTGCCTTTGTCCCCCAATCCCAGGGGCTGGAAGGCCATCACCATCATTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAAGGGGCACAGCCAAGGGAGGAGACCTGATGCTGGACAGCAGCTGTCCTGGTGAGCATCTTATGTaGCTCATGCTCTTCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: KERGTAKGGDLMLDSSCPGEHLM*LMLFSF Trigger: GAAGCTGAAGAGCATGAGGCACATAAGATGCTCACC...AGGACAGCTGCTGTCCAGCATCAGGTCTCCTCCCTTGGCTGTGCCCCTTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGCACCCCAGATCCTTCCACCTCTTGCTGTTGTTCAAGGGAAGGAAAGGACCTTGACCCCTTTGTaGACTAGGTTGTGCAGCGTC | + |
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Preference number: 2 (lower is better) Translates to: LPAPQILPPLAVVQGKERTLTPL*TRLCSV Trigger: GACGCTGCACAACCTAGTCCACAAAGGGGTCAAGGT...CCTTTCCTTCCCTTGAACAACAGCAAGAGGTGGAAGGATCTGGGGTGCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGACCCCGGAGCTCGTGAGGGGGACTGTGTAGAAAGAGAGCTGCCTTCTGCTATCTTATGTGCCTCATaGTCTTCAGCTTCCATGTCA | + |
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Preference number: 2 (lower is better) Translates to: VDPGAREGDCVERELPSAILCAS*SSASMS Trigger: TGACATGGAAGCTGAAGAGCATGAGGCACATAAGAT...AGCAGAAGGCAGCTCTCTTTCTACACAGTCCCCCTCACGAGCTCCGGGGTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAATGATGGTGATGGCCTTCCAGCCCCTGGGATTGGGGGACAAAGGCAAAAATATCCATCACCACCTTaGCCCCTTTGTGGACTAGGT | + |
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Preference number: 2 (lower is better) Translates to: SNDGDGLPAPGIGGQRQKYPSPP*PLCGLG Trigger: ACCTAGTCCACAAAGGGGTCAAGGTGGTGATGGATA...TTTTTGCCTTTGTCCCCCAATCCCAGGGGCTGGAAGGCCATCACCATCATTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAATGATGGTGATGGCCTTCCAGCCCCTGGGATTGGGGGACAAAGGCAAAAATTTCCCTTCAGCACGTaGTTGGCACAGAGGAATTCA | + |
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Preference number: 2 (lower is better) Translates to: SNDGDGLPAPGIGGQRQKFPFST*LAQRNS Trigger: TGAATTCCTCTGTGCCAACCACGTGCTGAAGGGAAA...TTTTTGCCTTTGTCCCCCAATCCCAGGGGCTGGAAGGCCATCACCATCATTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCGAATTTACCATCCGACAAGGACCAGCAGAAGAGAATGCTTGGTGGAAGGAATCTTATGTGCCTCATaGTCTTCAGCTTCCATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SRIYHPTRTSRRECLVEGILCAS*SSASMS Trigger: TGACATGGAAGCTGAAGAGCATGAGGCACATAAGAT...TCCTTCCACCAAGCATTCTCTTCTGCTGGTCCTTGTCGGATGGTAAATTCGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTGCCACAGGACAGCAGCTGTCCTaGCTGGAGCTGCGCTGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: LCSLWRGSGSGVQPLCATGQQLS*LELRCA Trigger: AGCGCAGCGCAGCTCCAGCAAGGACAGCTGCTGTCC...TGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTGCCACACTCCTCCTCTTCCCTTaGGGGTGCCGTCTCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LCSLWRGSGSGVQPLCATLLLFP*GCRLPA Trigger: TGCTGGGAGACGGCACCCCAAAGGGAAGAGGAGGAG...TGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGCGCTGGTGAGCATCTTATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGTCCTCCTCCTCGGCGTaGGCATCCTCCCCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GGAGEHLMCLMLFSFHVRSSSSA*ASSPRP Trigger: GGGCCTGGGGGAGGATGCCAACGCCGAGGAGGAGGA...CCTGACATGGAAGCTGAAGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCCTTCCTGGCTGAAGGGGGCGCTGGTGAGCATCTTATGTGCCTCATGCTCGGACAGCAGCTGTCCTaGCTGGAGCTGCGCTGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: ESFLAEGGAGEHLMCLMLGQQLS*LELRCA Trigger: AGCGCAGCGCAGCTCCAGCAAGGACAGCTGCTGTCC...GAGCATGAGGCACATAAGATGCTCACCAGCGCCCCCTTCAGCCAGGAAGGACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGCCCTCTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTCCCTTCAGCACGTGGTaGGCACAGAGGAATTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RCPLCSLWRGSGSGVQPLPFSTW*AQRNSV Trigger: GACTGAATTCCTCTGTGCCAACCACGTGCTGAAGGG...AAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAGAGGGCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTGCCACACCCGAGTTCCGCTGCGCTTCTTCTaGGATTTCTTCCCTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLAWLWLWRPAPLCHTRVPLRFF*DFFPPR Trigger: CCTGGGAGGGAAGAAATCCAAGAAGAAGCGCAGCGG...AACTCGGGTGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| 3UTR GCA 72 bp | GATGCTGGACAGCAGCTGTCCTTGCTGGAGCTGCGCTaGGCTGCGCTGTGCGTGTCCCAAGCTCTGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DAGQQLSLLELR*AALCVSQALKS Trigger: TGACTTCAGAGCTTGGGACACGCACAGCGCAGCGCAGCGCAGCTCCAGCAAGGACAGCTGCTGTCCAGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTGCCACAACCACCTTGACCCCTTaGTGGACTAGGTTGTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LCSLWRGSGSGVQPLCATTTLTP*WTRLCS Trigger: GCTGCACAACCTAGTCCACAAAGGGGTCAAGGTGGT...TGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| 3UTR TCA 72 bp | AAGGGAAGGAAAGGGGCACAGCCAAGGGAGGAGACCTaGTGCTGGACAGCAGCTGTCCTTGCTGGAGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: KGRKGAQPREET*CWTAAVLAGAA Trigger: CGCAGCTCCAGCAAGGACAGCTGCTGTCCAGCATCAGGTCTCCTCCCTTGGCTGTGCCCCTTTCCTTCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR CCA 72 bp | TGTGCCTCATGCTCTTCAGCTTCCATGTCAGGAGCCTaGATCTCAGCCTGGGGATGCTGGGTGGACCCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: CASCSSASMSGA*ISAWGCWVDPG Trigger: TCCGGGGTCCACCCAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGCCCTCTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTTCCACCTCTTGCTGTaGTTCAAGGGAAGGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RCPLCSLWRGSGSGVQPLFHLLL*FKGRKG Trigger: CCCTTTCCTTCCCTTGAACAACAGCAAGAGGTGGAA...AAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAGAGGGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGACACTCTGGAGGCTGATGAGGACCCAGGAACCAAACCGAAAGGCCAAAAGGCTCCTCCTCTTCCCTTaGGGGTGCCGTCTCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GTLWRLMRTQEPNRKAKRLLLFP*GCRLPA Trigger: TGCTGGGAGACGGCACCCCAAAGGGAAGAGGAGGAG...CCTTTTGGCCTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR GCA 72 bp | CTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTaGCACACCCGAGTTTGTCCTGGAAGTTCTCGAATT | + |
|
Preference number: 3 (lower is better) Translates to: LAWLWLWRPAPL*HTRVCPGSSRI Trigger: AATTCGAGAACTTCCAGGACAAACTCGGGTGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCAGCACCCCAGATCCTTCCACCTCTTGCTGTTGTTCAAGGGAAGGAAAGGTGGCGTCCAGCCCCTTaGTGCCACACCCGAGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPAPQILPPLAVVQGKERWRPAP*CHTRVC Trigger: ACAAACTCGGGTGTGGCACAAAGGGGCTGGACGCCA...CCTTTCCTTCCCTTGAACAACAGCAAGAGGTGGAAGGATCTGGGGTGCTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGCTATGTCCCCCTTCTaGCCAGACCACCGCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YVPHALQLPCQEPGSQPGAMSPF*PDHRSA Trigger: AGCAGAGCGGTGGTCTGGCAAGAAGGGGGACATAGC...CCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGCACATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGCGCTGGTGAGCATCTTATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGAGTTCCTTCCTCTGCTaGCTGCTGCCACTGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GGAGEHLMCLMLFSFHVRSSFLC*LLPLEE Trigger: CTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGGAACT...CCTGACATGGAAGCTGAAGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| 3UTR TCA 72 bp | CCTTCCTCTGCTTGCTGCTGCCACTGGAGGAGCCCTTaGCTCCGCTGCGCTTCTTCTTGGATTTCTTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSSACCCHWRSP*LRCASSWISSL Trigger: GAGGGAAGAAATCCAAGAAGAAGCGCAGCGGAGTCAAGGGCTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| 3UTR GCA 72 bp | GTGCCGTCTCCCAGCACCCCAGATCCTTCCACCTCTTaGTGTTGTTCAAGGGAAGGAAAGGGGCACAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VPSPSTPDPSTS*CCSREGKGHSQ Trigger: TTGGCTGTGCCCCTTTCCTTCCCTTGAACAACAGCAAGAGGTGGAAGGATCTGGGGTGCTGGGAGACGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR GCA 72 bp | ATTTCTTCCCTCCCAGGGAGGCTATGTCCCCCTTCTTaGCAGACCACCGCTCTGCTAGGCAACTCGTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ISSLPGRLCPPS*QTTALLGNSCP Trigger: AGGACACGAGTTGCCTAGCAGAGCGGTGGTCTGGCAAGAAGGGGGACATAGCCTCCCTGGGAGGGAAGAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| 3UTR TCA 72 bp | AACCAACCCCGGGCGCTCCCAGCACCTCCTAGTAACTaGCAGGTTAAGCCTCCAATGATGGTGATGGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: NQPRALPAPPSN*QVKPPMMVMAF Trigger: GAAGGCCATCACCATCATTGGAGGCTTAACCTGTCAGTTACTAGGAGGTGCTGGGAGCGCCCGGGGTTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR GCA 72 bp | TTCCTGGCTGAAGGGGGCGCTGGTGAGCATCTTATGTaGCTCATGCTCTTCAGCTTCCATGTCAGGAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLAEGGAGEHLM*LMLFSFHVRSL Trigger: CAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCCTTCAGCCAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCCTTCCTGGCTGAAGGGGGCGCTGGTGAGCATCTTATGTGCCTCATGCTCAGATCCTTCCACCTCTaGCTGTTGTTCAAGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ESFLAEGGAGEHLMCLMLRSFHL*LLFKGR Trigger: CCTTCCCTTGAACAACAGCAAGAGGTGGAAGGATCT...GAGCATGAGGCACATAAGATGCTCACCAGCGCCCCCTTCAGCCAGGAAGGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGATGCTGGGTTTCCACCTCTTGCTGTaGTTCAAGGGAAGGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: MLFSFHVRSLDLSLGMLGFHLLL*FKGRKG Trigger: CCCTTTCCTTCCCTTGAACAACAGCAAGAGGTGGAA...ACCCAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTATATCCATCACCACCTaGACCCCTTTGTGGACTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SYVPHALQLPCQEPGSQPISITT*TPLWTR Trigger: CCTAGTCCACAAAGGGGTCAAGGTGGTGATGGATAT...AGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGCACATAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| 3UTR TCA 72 bp | TGTGAGCCACCATGTGATTGCTGGGAACTGAACTCATaGCCTCTGGAAAGCACAACCAGTGCTCTTAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: CEPPCDCWELNS*PLESTTSALNP Trigger: GGGGTTAAGAGCACTGGTTGTGCTTTCCAGAGGTCATGAGTTCAGTTCCCAGCAATCACATGGTGGCTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCGAATTTACCATCCGACAAGGACCAGCAGAAGAGAATGCTTGGTGGAAGGAAGCAGAAGAGAATGCTaGGTGGAAGGAAGAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRIYHPTRTSRRECLVEGSRREC*VEGRGR Trigger: CCTGCCTCTTCCTTCCACCAAGCATTCTCTTCTGCT...TCCTTCCACCAAGCATTCTCTTCTGCTGGTCCTTGTCGGATGGTAAATTCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| 3UTR CCA 72 bp | ATGAAACAGCATCGAAATAATTTTATGGTGTGTGTGTaGGGGCGTGGGAGTCACCACAACAGAAGGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: MKQHRNNFMVCV*GRGSHHNRRNC Trigger: ACAGTTCCTTCTGTTGTGGTGACTCCCACGCCCCCACACACACACCATAAAATTATTTCGATGCTGTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| CDS-3UTR CCA 90 bp | GTGGACCCCGGAGCTCGTGAGGGGGACTGTGTAGAAAGAGAGCTGCCTTCTGCTCCTCCTCCTCGGCGTTaGCATCCTCCCCCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VDPGAREGDCVERELPSAPPPRR*HPPPGP Trigger: GGGGCCTGGGGGAGGATGCCAACGCCGAGGAGGAGG...AGCAGAAGGCAGCTCTCTTTCTACACAGTCCCCCTCACGAGCTCCGGGGTCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCCCTCTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTCCCAGTTCCTTCCTCTaGTTGCTGCTGCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPSLQSLAWLWLWRPAPPSSFL*LLLPLE Trigger: CTCCAGTGGCAGCAGCAAGCAGAGGAAGGAACTGGG...AGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAGAGGGCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGCTGGGCAGAGCATGAGGCGTCCTCAGGAGGAGTGGGTGGACACGGGAGTCAGCCACCTCTGCTaGGGTCTCGTTCCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRAGQSMRRPQEEWVDTGVSHLC*GLVPQL Trigger: GAGCTGTGGAACGAGACCTCAGCAGAGGTGGCTGAC...TCCCGTGTCCACCCACTCCTCCTGAGGACGCCTCATGCTCTGCCCAGCCCTTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGGCTGGGCAGAGCATGAGGCGTCCTCAGGAGGAGTGGGTGGACACGGGACACTTCGCATTTGCTaGGCAATCGCACCCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EKGWAEHEASSGGVGGHGTLRIC*AIAPSR Trigger: CCGACTGGGTGCGATTGCCCAGCAAATGCGAAGTGT...CCCGTGTCCACCCACTCCTCCTGAGGACGCCTCATGCTCTGCCCAGCCCTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR TCA 90 bp | GACCCCGGAGCTCGTGAGGGGGACTGTGTAGAAAGAGAGCTGCCTTCTGCTCCTCACTGGAGGAGCCCTTaGCTCCGCTGCGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DPGAREGDCVERELPSAPHWRSP*LRCASS Trigger: AGAAGAAGCGCAGCGGAGTCAAGGGCTCCTCCAGTG...AGGAGCAGAAGGCAGCTCTCTTTCTACACAGTCCCCCTCACGAGCTCCGGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGCTGGGCAGAGCATGAGGCGTCCTCAGGAGGAGTGGGTGGACACGGGAGTCAGGTCTTCCTCCTaGTGGTTCCTGTACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRAGQSMRRPQEEWVDTGVRSSS*WFLYQS Trigger: GGACTGGTACAGGAACCACCAGGAGGAAGACCTGAC...TCCCGTGTCCACCCACTCCTCCTGAGGACGCCTCATGCTCTGCCCAGCCCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| 3UTR CAA 72 bp | TCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTaGTGCCACACCCGAGTTTGTCCTGGAAGTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLAWLWLWRPAP*CHTRVCPGSSR Trigger: TCGAGAACTTCCAGGACAAACTCGGGTGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000129200.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCCTTCCTGGCTGAAGGGGGCGCTGGTGAGCATCTTATGTGCCTCATGCTCCCTTCCTCTGCTTGCTaGTGCCACTGGAGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ESFLAEGGAGEHLMCLMLPSSAC*CHWRSP Trigger: AGGGCTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGG...GAGCATGAGGCACATAAGATGCTCACCAGCGCCCCCTTCAGCCAGGAAGGACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| 3UTR CAA 72 bp | GATTTCTTCCCTCCCAGGGAGGCTATGTCCCCCTTCTaGCCAGACCACCGCTCTGCTAGGCAACTCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DFFPPREAMSPF*PDHRSARQLVS Trigger: GGACACGAGTTGCCTAGCAGAGCGGTGGTCTGGCAAGAAGGGGGACATAGCCTCCCTGGGAGGGAAGAAATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTTAAGCCTCCAATGATGGTGATGGCCTTCCAGCCCCTGGGATTGGGGGACCGTCACACTGCTTCTTaGGGTCAGCCACCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVKPPMMVMAFQPLGLGDRHTAS*GQPPLL Trigger: CAGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGACG...GTCCCCCAATCCCAGGGGCTGGAAGGCCATCACCATCATTGGAGGCTTAACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR GCA 90 bp | CAGGTTAAGCCTCCAATGATGGTGATGGCCTTCCAGCCCCTGGGATTGGGGGACGTTCCTTCCTCTGCTTaGTGCTGCCACTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVKPPMMVMAFQPLGLGDVPSSA*CCHWRS Trigger: GCTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGGAAC...GTCCCCCAATCCCAGGGGCTGGAAGGCCATCACCATCATTGGAGGCTTAACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTGCCACACCCGAGTTCCACAGCAACATACTTaGACACTTCGCATTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAWLWLWRPAPLCHTRVPQQHT*TLRICW Trigger: CCAGCAAATGCGAAGTGTGCAAGTATGTTGCTGTGG...AACTCGGGTGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR CCA 90 bp | TGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTTGTGCCACACCCGAGTTTGTCTTTCCCTTCAGCACGTaGTTGGCACAGAGGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: WRGSGSGVQPLCATPEFVFPFST*LAQRNS Trigger: TGAATTCCTCTGTGCCAACCACGTGCTGAAGGGAAA...GACAAACTCGGGTGTGGCACAAAGGGGCTGGACGCCAGAGCCAGAGCCACGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR CCA 90 bp | TGTTCAAGGGAAGGAAAGGGGCACAGCCAAGGGAGGAGACCTGATGCTGGACAGACCCTTCGCATTTGCTaGGCAATCGCACCCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSREGKGHSQGRRPDAGQTLRIC*AIAPSR Trigger: CCGACTGGGTGCGATTGCCCAGCAAATGCGAAGGGT...CTGTCCAGCATCAGGTCTCCTCCCTTGGCTGTGCCCCTTTCCTTCCCTTGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| CDS-3UTR CCA 90 bp | ACCGAAAGGCCAAAAGGTGTTTACTCTGGTAGCCCTGGGAGAAGGGCTGGGCAGCGCTGCGCTTCTTCTTaGATTTCTTCCCTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TERPKGVYSGSPGRRAGQRCASS*ISSLPG Trigger: CCCTGGGAGGGAAGAAATCCAAGAAGAAGCGCAGCG...CTGCCCAGCCCTTCTCCCAGGGCTACCAGAGTAAACACCTTTTGGCCTTTCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| 3UTR CAA 72 bp | TCCTTCCTCTGCTTGCTGCTGCCACTGGAGGAGCCCTaGACTCCGCTGCGCTTCTTCTTGGATTTCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLCLLLPLEEP*TPLRFFLDFFP Trigger: AGGGAAGAAATCCAAGAAGAAGCGCAGCGGAGTCAAGGGCTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129200.2 |
||
| CDS-3UTR GCA 90 bp | CTTGCTGTTGTTCAAGGGAAGGAAAGGGGCACAGCCAAGGGAGGAGACCTGATGTGGCAAACCGGTTGCTaGCAGTCCTCTCCTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAVVQGKERGTAKGGDLMWQTGC*QSSPCA Trigger: TGCACAAGGAGAGGACTGGCAGCAACCGGTTTGCCA...CATCAGGTCTCCTCCCTTGGCTGTGCCCCTTTCCTTCCCTTGAACAACAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR GCA 90 bp | TATGTGCCTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGCCTTGGCAAACCGGTTaGTGCCAGTCCTCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YVPHALQLPCQEPGSQPGPWQTG*CQSSPC Trigger: ACAAGGAGAGGACTGGCAGCAACCGGTTTGCCAAGG...CCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGCACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
||
| CDS-3UTR CCA 90 bp | GGGACACTCTGGAGGCTGATGAGGACCCAGGAACCAAACCGAAAGGCCAAAAGGACCTTGACCCCTTTGTaGACTAGGTTGTGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTLWRLMRTQEPNRKAKRTLTPL*TRLCSV Trigger: GACGCTGCACAACCTAGTCCACAAAGGGGTCAAGGT...CCTTTTGGCCTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CCA 90 bp | CTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGATGCTGAGGTCTTCCTCCTGGTaGTTCCTGTACCAGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LMLFSFHVRSLDLSLGMLRSSSW*FLYQSS Trigger: TGAGGACTGGTACAGGAACCACCAGGAGGAAGACCT...CAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR TCA 90 bp | GGGACACTCTGGAGGCTGATGAGGACCCAGGAACCAAACCGAAAGGCCAAAAGGTATCCATCACCACCTTaGCCCCTTTGTGGACTAGGT | + |
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Preference number: 4 (lower is better) Translates to: GTLWRLMRTQEPNRKAKRYPSPP*PLCGLG Trigger: ACCTAGTCCACAAAGGGGTCAAGGTGGTGATGGATA...CCTTTTGGCCTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR GCA 90 bp | ACCGAAAGGCCAAAAGGTGTTTACTCTGGTAGCCCTGGGAGAAGGGCTGGGCAGTTGTGGACTAGGTTGTaGAGCGTCTCAAAGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TERPKGVYSGSPGRRAGQLWTRL*SVSKVS Trigger: GGAGACCTTTGAGACGCTGCACAACCTAGTCCACAA...CTGCCCAGCCCTTCTCCCAGGGCTACCAGAGTAAACACCTTTTGGCCTTTCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CCA 90 bp | CAAGGGAAGGAAAGGGGCACAGCCAAGGGAGGAGACCTGATGCTGGACAGCAGCTGTCAATCACTTCCTTaGTCTTTCCCGTTTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: QGKERGTAKGGDLMLDSSCQSLP*SFPFPQ Trigger: TTGAGGAAACGGGAAAGACCAAGGAAGTGATTGACA...GCTGCTGTCCAGCATCAGGTCTCCTCCCTTGGCTGTGCCCCTTTCCTTCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CCA 90 bp | ATCGATGAGGGGACACTCTGGAGGCTGATGAGGACCCAGGAACCAAACCGAAAGCCTTCAGCACGTGGTTaGCACAGAGGAATTCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: IDEGTLWRLMRTQEPNRKPSARG*HRGIQS Trigger: TGACTGAATTCCTCTGTGCCAACCACGTGCTGAAGG...CTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCCCTCATCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR TCA 90 bp | GTGGACCCCGGAGCTCGTGAGGGGGACTGTGTAGAAAGAGAGCTGCCTTCTGCTTGCAAATGGTCTCAGTaGCTTCAATTAACCGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: VDPGAREGDCVERELPSACKWSQ*LQLTVS Trigger: ACTTACGGTTAATTGAAGTCACTGAGACCATTTGCA...AGCAGAAGGCAGCTCTCTTTCTACACAGTCCCCCTCACGAGCTCCGGGGTCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CCA 90 bp | GATCCCATTACAGATAGTTGTGAGCCACCATGTGATTGCTGGGAACTGAACTCAACACTTCGCATTTGCTaGGCAATCGCACCCAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: DPITDSCEPPCDCWELNSTLRIC*AIAPSR Trigger: CCGACTGGGTGCGATTGCCCAGCAAATGCGAAGTGT...TGAGTTCAGTTCCCAGCAATCACATGGTGGCTCACAACTATCTGTAATGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
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| CDS-3UTR GCA 90 bp | GATCCCATTACAGATAGTTGTGAGCCACCATGTGATTGCTGGGAACTGAACTCACCACAGCAACATACTTaGACACTTCGCATTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: DPITDSCEPPCDCWELNSPQQHT*TLRICW Trigger: CCAGCAAATGCGAAGTGTGCAAGTATGTTGCTGTGG...TGAGTTCAGTTCCCAGCAATCACATGGTGGCTCACAACTATCTGTAATGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
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| CDS-3UTR CCA 90 bp | GATCCCATTACAGATAGTTGTGAGCCACCATGTGATTGCTGGGAACTGAACTCATGTCAATCACTTCCTTaGTCTTTCCCGTTTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: DPITDSCEPPCDCWELNSCQSLP*SFPFPQ Trigger: TTGAGGAAACGGGAAAGACCAAGGAAGTGATTGACA...TGAGTTCAGTTCCCAGCAATCACATGGTGGCTCACAACTATCTGTAATGGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
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| CDS-3UTR CCA 90 bp | GATCCCATTACAGATAGTTGTGAGCCACCATGTGATTGCTGGGAACTGAACTCATTAAATAAATCACACTaGATCGTGAGATGCAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: DPITDSCEPPCDCWELNSLNKSH*IVRCKW Trigger: CCACTTGCATCTCACGATCCAGTGTGATTTATTTAA...TGAGTTCAGTTCCCAGCAATCACATGGTGGCTCACAACTATCTGTAATGGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
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| CDS-3UTR CAA 90 bp | AGGTGCCCTCTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTCCCTTGGCAAACCGGTaGCTGCCAGTCCTCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RCPLCSLWRGSGSGVQPLPLANR*LPVLSL Trigger: CAAGGAGAGGACTGGCAGCAACCGGTTTGCCAAGGG...AAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAGAGGGCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CAA 90 bp | AGGTGCCCTCTCTGCAGTCTCTGGCGTGGCTCTGGCTCTGGCGTCCAGCCCCTTGCTATGTCCCCCTTCTaGCCAGACCACCGCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RCPLCSLWRGSGSGVQPLAMSPF*PDHRSA Trigger: AGCAGAGCGGTGGTCTGGCAAGAAGGGGGACATAGC...AAGGGGCTGGACGCCAGAGCCAGAGCCACGCCAGAGACTGCAGAGAGGGCACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CAA 90 bp | CTCATGCTCTTCAGCTTCCATGTCAGGAGCCTGGATCTCAGCCTGGGGATGCTGTCCTCCTCCTCGGCGTaGGCATCCTCCCCCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LMLFSFHVRSLDLSLGMLSSSSA*ASSPRP Trigger: GGGCCTGGGGGAGGATGCCAACGCCGAGGAGGAGGA...CAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CAA 90 bp | AGAAGGGCTGGGCAGAGCATGAGGCGTCCTCAGGAGGAGTGGGTGGACACGGGAACCACCTTGACCCCTTaGTGGACTAGGTTGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RRAGQSMRRPQEEWVDTGTTLTP*WTRLCS Trigger: GCTGCACAACCTAGTCCACAAAGGGGTCAAGGTGGT...TCCCGTGTCCACCCACTCCTCCTGAGGACGCCTCATGCTCTGCCCAGCCCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS GCA 90 bp | AAGCCGACTTCAGCTCCACAGCAACATACTTGCACACTTCGCATTTaGTGGGCAATCGCACCCAGTCGGTCTCCTCAGCCCCGGCGGGAC | + |
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Preference number: 5 (lower is better) Translates to: KPTSAPQQHTCTLRI*WAIAPSRSPQPRRD Trigger: GTCCCGCCGGGGCTGAGGAGACCGACTGGGTGCGATTGCCCAGCAAATGCGAAGTGTGCAAGTATGTTGCTGTGGAGCTGAAGTCGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000121671.2 |
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| CDS GCA 90 bp | GCAGCGTCTCAAAGGTCTCCGACATACCCTTGGCAAACCGGTTGCTaGCAGTCCTCTCCTTGTGCAGGCTGTAGTCCAGAAGCCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: AASQRSPTYPWQTGC*QSSPCAGCSPEASC Trigger: GCAAGAGGCTTCTGGACTACAGCCTGCACAAGGAGAGGACTGGCAGCAACCGGTTTGCCAAGGGTATGTCGGAGACCTTTGAGACGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CAA 90 bp | ACCGAAAGGCCAAAAGGTGTTTACTCTGGTAGCCCTGGGAGAAGGGCTGGGCAGCCGCTGCGCTTCTTCTaGGATTTCTTCCCTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TERPKGVYSGSPGRRAGQPLRFF*DFFPPR Trigger: CCTGGGAGGGAAGAAATCCAAGAAGAAGCGCAGCGG...CTGCCCAGCCCTTCTCCCAGGGCTACCAGAGTAAACACCTTTTGGCCTTTCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS GCA 90 bp | TGTGCAGCGTCTCAAAGGTCTCCGACATACCCTTGGCAAACCGGTTaGTGCCAGTCCTCTCCTTGTGCAGGCTGTAGTCCAGAAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: CAASQRSPTYPWQTG*CQSSPCAGCSPEAS Trigger: AGAGGCTTCTGGACTACAGCCTGCACAAGGAGAGGACTGGCAGCAACCGGTTTGCCAAGGGTATGTCGGAGACCTTTGAGACGCTGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CAA 90 bp | CAAGGGAAGGAAAGGGGCACAGCCAAGGGAGGAGACCTGATGCTGGACAGCAGCATATCCATCACCACCTaGACCCCTTTGTGGACTAGG | + |
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Preference number: 5 (lower is better) Translates to: QGKERGTAKGGDLMLDSSISITT*TPLWTR Trigger: CCTAGTCCACAAAGGGGTCAAGGTGGTGATGGATAT...GCTGCTGTCCAGCATCAGGTCTCCTCCCTTGGCTGTGCCCCTTTCCTTCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CAA 90 bp | CTCCCAGCACCCCAGATCCTTCCACCTCTTGCTGTTGTTCAAGGGAAGGAAAGGAGTTCCTTCCTCTGCTaGCTGCTGCCACTGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LPAPQILPPLAVVQGKERSSFLC*LLPLEE Trigger: CTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGGAACT...CCTTTCCTTCCCTTGAACAACAGCAAGAGGTGGAAGGATCTGGGGTGCTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CAA 90 bp | GATGAGGGGACACTCTGGAGGCTGATGAGGACCCAGGAACCAAACCGAAAGGCCAACCGTAAGTCCGACTaGGTGTACTTGACTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: DEGTLWRLMRTQEPNRKANRKSD*VYLTPE Trigger: CTCTGGAGTCAAGTACACCAAGTCGGACTTACGGTT...GGCCTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCCCTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS TCA 90 bp | CTGAGGTCTCGTTCCACAGCTCATAGGGGATATCCATCACCACCTTaGCCCCTTTGTGGACTAGGTTGTGCAGCGTCTCAAAGGTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: LRSRSTAHRGYPSPP*PLCGLGCAASQRSP Trigger: CGGAGACCTTTGAGACGCTGCACAACCTAGTCCACAAAGGGGTCAAGGTGGTGATGGATATCCCCTATGAGCTGTGGAACGAGACCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS TCA 90 bp | ATGCAAGTGGCTGGGATCCATCAGGACTCCTGTTGGTCTCACTTTTaGCTTGGTGTACTTGACTCCAGAGCCCTTCCCGTCCAGGATGCC | + |
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Preference number: 5 (lower is better) Translates to: MQVAGIHQDSCWSHF*LGVLDSRALPVQDA Trigger: GGCATCCTGGACGGGAAGGGCTCTGGAGTCAAGTACACCAAGTCAAAAGTGAGACCAACAGGAGTCCTGATGGATCCCAGCCACTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
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| CDS CCA 90 bp | AGCCCTTCCCGTCCAGGATGCCATAGCCGGTGTCAATCACTTCCTTaGTCTTTCCCGTTTCCTCAAAAGCCGACTTCAGCTCCACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SPSRPGCHSRCQSLP*SFPFPQKPTSAPQQ Trigger: TTGCTGTGGAGCTGAAGTCGGCTTTTGAGGAAACGGGAAAGACCAAGGAAGTGATTGACACCGGCTATGGCATCCTGGACGGGAAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000121671.2 |
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| CDS-3UTR CAA 90 bp | TCTCGAATTTACCATCCGACAAGGACCAGCAGAAGAGAATGCTTGGTGGAAGGACCCTTCAGCACGTGGTaGGCACAGAGGAATTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: SRIYHPTRTSRRECLVEGPFSTW*AQRNSV Trigger: GACTGAATTCCTCTGTGCCAACCACGTGCTGAAGGG...TCCTTCCACCAAGCATTCTCTTCTGCTGGTCCTTGTCGGATGGTAAATTCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS-3UTR CAA 90 bp | GATCCCATTACAGATAGTTGTGAGCCACCATGTGATTGCTGGGAACTGAACTCACCATCAGGACTCCTGTaGGTCTCACTTTTGACTTGG | + |
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Preference number: 5 (lower is better) Translates to: DPITDSCEPPCDCWELNSPSGLL*VSLLTW Trigger: CCAAGTCAAAAGTGAGACCAACAGGAGTCCTGATGG...TGAGTTCAGTTCCCAGCAATCACATGGTGGCTCACAACTATCTGTAATGGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
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| CDS-3UTR CAA 90 bp | GATCCCATTACAGATAGTTGTGAGCCACCATGTGATTGCTGGGAACTGAACTCAGGTCTCACTTTTGACTaGGTGTACTTGACTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: DPITDSCEPPCDCWELNSGLTFD*VYLTPE Trigger: CTCTGGAGTCAAGTACACCAAGTCAAAAGTGAGACC...TGAGTTCAGTTCCCAGCAATCACATGGTGGCTCACAACTATCTGTAATGGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
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| CDS CCA 72 bp | GCTCCACAGCAACATACTTGCACACTTCGCATTTGCTaGGCAATCGCACCCAGTCGGTCTCCTCAGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: APQQHTCTLRIC*AIAPSRSPQPR Trigger: CCGGGGCTGAGGAGACCGACTGGGTGCGATTGCCCAGCAAATGCGAAGTGTGCAAGTATGTTGCTGTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000121671.2 |
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| CDS CAA 90 bp | AAAGCCGACTTCAGCTCCACAGCAACATACTTGCACACTTCGCATTaGCTGGGCAATCGCACCCAGTCGGTCTCCTCAGCCCCGGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: KADFSSTATYLHTSH*LGNRTQSVSSAPAG Trigger: TCCCGCCGGGGCTGAGGAGACCGACTGGGTGCGATTGCCCAGCAAATGCGAAGTGTGCAAGTATGTTGCTGTGGAGCTGAAGTCGGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000121671.2 |
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| CDS GCA 72 bp | TCAGCTCCACAGCAACATACTTGCACACTTCGCATTTaGTGGGCAATCGCACCCAGTCGGTCTCCTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SAPQQHTCTLRI*WAIAPSRSPQP Trigger: GGGCTGAGGAGACCGACTGGGTGCGATTGCCCAGCAAATGCGAAGTGTGCAAGTATGTTGCTGTGGAGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000121671.2 |
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| CDS GCA 72 bp | CAAAGGTCTCCGACATACCCTTGGCAAACCGGTTGCTaGCAGTCCTCTCCTTGTGCAGGCTGTAGTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: QRSPTYPWQTGC*QSSPCAGCSPE Trigger: TTCTGGACTACAGCCTGCACAAGGAGAGGACTGGCAGCAACCGGTTTGCCAAGGGTATGTCGGAGACCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS CAA 72 bp | TTCAGCTCCACAGCAACATACTTGCACACTTCGCATTaGCTGGGCAATCGCACCCAGTCGGTCTCCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FSSTATYLHTSH*LGNRTQSVSSA Trigger: GGCTGAGGAGACCGACTGGGTGCGATTGCCCAGCAAATGCGAAGTGTGCAAGTATGTTGCTGTGGAGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000121671.2 |
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| CDS GCA 72 bp | TCCATCACCACCTTGACCCCTTTGTGGACTAGGTTGTaGAGCGTCTCAAAGGTCTCCGACATACCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SITTLTPLWTRL*SVSKVSDIPLA Trigger: TGCCAAGGGTATGTCGGAGACCTTTGAGACGCTGCACAACCTAGTCCACAAAGGGGTCAAGGTGGTGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059844.13 |
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| CDS CCA 72 bp | CGTCCAGGATGCCATAGCCGGTGTCAATCACTTCCTTaGTCTTTCCCGTTTCCTCAAAAGCCGACTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RPGCHSRCQSLP*SFPFPQKPTSA Trigger: AGCTGAAGTCGGCTTTTGAGGAAACGGGAAAGACCAAGGAAGTGATTGACACCGGCTATGGCATCCTGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059844.13 ENSMUST00000121671.2 |
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| CDS CCA 72 bp | TTTTTAAATAAATCACACTGGATCGTGAGATGCAAGTaGCTGGGATCCATCAGGACTCCTGTTGGTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: FLNKSHWIVRCK*LGSIRTPVGLT Trigger: AGTGAGACCAACAGGAGTCCTGATGGATCCCAGCCACTTGCATCTCACGATCCAGTGTGATTTATTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121671.2 |
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