Pregenerated sensors for CNPY2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025381Ensembl transcript IDs: ENSMUST00000026446.4, ENSMUST00000219037.2, ENSMUST00000219836.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAGTGCCGGGCAGTGGTGGCGCTGCCTTTAATCCCAGCACCAGGGAGGCAGAGGGCCTTGTCTACAGAGTaGGTTCCAGGATGGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QCRAVVALPLIPAPGRQRALSTE*VPGWPG Trigger: CCCTGGCCATCCTGGAACTCACTCTGTAGACAAGGC...CCTCTGCCTCCCTGGTGCTGGGATTAAAGGCAGCGCCACCACTGCCCGGCACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219037.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCGGGCAGTGGTGGCGCTGCCTTTAATCCCAGCACCAGGGAGGCAGAGGGGTGCCGCTGATATCTaGGTCAATTCGGATGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCRAVVALPLIPAPGRQRGAADI*VNSDAL Trigger: CAGGGCATCCGAATTGACTCAGATATCAGCGGCACC...CCTCTGCCTCCCTGGTGCTGGGATTAAAGGCAGCGCCACCACTGCCCGGCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219037.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCCAGTGCCTCAAGCAACTCTGTaGGGTGGGCCTCTGAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLGVFHHVWCRLLAPVPQATL*GGPLSG Trigger: CCCGCTCAGAGGCCCACCTCACAGAGTTGCTTGAGG...CACTGGAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGCCGGGCAGTGGTGGCGCTGCCTTTAATCCCAGCACCAGGGAGGCAGAGGTACCTCCACAACTaGCTGGCTGCCATCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TQCRAVVALPLIPAPGRQRYLHN*LAAIWI Trigger: AATCCAGATGGCAGCCAGTCAGTTGTGGAGGTACCT...CTGCCTCCCTGGTGCTGGGATTAAAGGCAGCGCCACCACTGCCCGGCACTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219037.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCCAGTGTGTGAGGTGGGCCTCTaGGCGGGCATAAGGTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLGVFHHVWCRLLAPVCEVGL*AGIRYL Trigger: GAGGTACCTTATGCCCGCTCAGAGGCCCACCTCACA...CACTGGAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR TCA 90 bp | CATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCCACCTCAAGCAACTCTGTaGGGTGGGCCTCTGAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLPLLGVFHHVWCRLLAPPQATL*GGPLSG Trigger: CCCGCTCAGAGGCCCACCTCACAGAGTTGCTTGAGG...TGGAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCCAGTGCCACAGTGTAGATCTTaGCTCCTTCGAGCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLLGVFHHVWCRLLAPVPQCRS*LLRAQA Trigger: TGCCTGGGCTCGAAGGAGCCAAGATCTACACTGTGG...CACTGGAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR TCA 90 bp | AATGCTGCCATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCCGGAAGGATCCCATCTaGATGGTCTTCTTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NAAIFPSWGCSITFGVGCRKDPI*MVFLGS Trigger: GGACCCCAAGAAGACCATTCAGATGGGATCCTTCCG...GCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATGGCAGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAATGCTGCCATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCGGAAGGATCCCATCTaGATGGTCTTCTTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQCCHLPLLGVFHHVWCRRKDPI*MVFLGS Trigger: GGACCCCAAGAAGACCATTCAGATGGGATCCTTCCG...CCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATGGCAGCATTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTGGTGCCGCTGATATCTaGGTCAATTCGGATGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHLPLLGVFHHVWCRLLAGAADI*VNSDAL Trigger: CAGGGCATCCGAATTGACTCAGATATCAGCGGCACC...AGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCCAGTGCATCCACCAGAGCCCTaGAAGCTCCACAGTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLGVFHHVWCRLLAPVHPPEP*KLHSVD Trigger: ATCTACACTGTGGAGCTTGCAGGGCTCTGGTGGATG...CACTGGAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR TCA 90 bp | AATGCTGCCATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCAGGTACCTCCACAACTaGCTGGCTGCCATCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NAAIFPSWGCSITFGVGCRYLHN*LAAIWI Trigger: AATCCAGATGGCAGCCAGTCAGTTGTGGAGGTACCT...GCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATGGCAGCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR CCA 90 bp | CATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCCAGATCTGTGCAGGGCATaGTCACATAGATCTGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPLLGVFHHVWCRLLAPDLCRA*SHRSVR Trigger: GCGGACAGATCTATGTGACCATGCCCTGCACAGATC...TGGAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| 3UTR CAA 72 bp | AGCCCCCAACCTTCAAGCCTGGTACAAAGGCTGCCTTaGGGCATAAAAGACAACACAGTGCCGGGCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPQPSSLVQRLP*GIKDNTVPGSG Trigger: ACCACTGCCCGGCACTGTGTTGTCTTTTATGCCCAAAGGCAGCCTTTGTACCAGGCTTGAAGGTTGGGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219037.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGTACAAAGGCTGCCTTTGGGCATAAAAGACAACACAGTGCCGGGCAGTCCACAGTGTAGATCTTaGCTCCTTCGAGCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLVQRLPLGIKDNTVPGSPQCRS*LLRAQA Trigger: TGCCTGGGCTCGAAGGAGCCAAGATCTACACTGTGG...ACTGCCCGGCACTGTGTTGTCTTTTATGCCCAAAGGCAGCCTTTGTACCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219037.2 |
||
| CDS-3UTR CCA 90 bp | CATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCCATCTGAATGGTCTTCTTaGGGTCCACGCGGGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: HLPLLGVFHHVWCRLLAPSEWSS*GPRGQF Trigger: AAATTGCCCGCGTGGACCCCAAGAAGACCATTCAGA...TGGAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR CCA 90 bp | GCCATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCGTAAGTCTAGTTCACTaGATTCTCCATTCCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AIFPSWGCSITFGVGCLLVSLVH*ILHSGS Trigger: TGAGCCGGAATGGAGAATCCAGTGAACTAGACTTAC...GAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCAAGCCTGGTACAAAGGCTGCCTTTGGGCATAAAAGACAACACAGTGCCGCATCCACCAGAGCCCTaGAAGCTCCACAGTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSLVQRLPLGIKDNTVPHPPEP*KLHSVD Trigger: ATCTACACTGTGGAGCTTGCAGGGCTCTGGTGGATG...CGGCACTGTGTTGTCTTTTATGCCCAAAGGCAGCCTTTGTACCAGGCTTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219037.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCAAGCCTGGTACAAAGGCTGCCTTTGGGCATAAAAGACAACACAGTGCCGTCTGAATGGTCTTCTTaGGGTCCACGCGGGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PSSLVQRLPLGIKDNTVPSEWSS*GPRGQF Trigger: AAATTGCCCGCGTGGACCCCAAGAAGACCATTCAGA...CGGCACTGTGTTGTCTTTTATGCCCAAAGGCAGCCTTTGTACCAGGCTTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219037.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCCCTTTTAAATGTACGCTATTACAACCCATCCCTTCATTTTCTTCCCATCGATCTGTGCAGGGCATaGTCACATAGATCTGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RALLNVRYYNPSLHFLPIDLCRA*SHRSVR Trigger: GCGGACAGATCTATGTGACCATGCCCTGCACAGATC...GATGGGAAGAAAATGAAGGGATGGGTTGTAATAGCGTACATTTAAAAGGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219037.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGCCGGGCAGTGGTGGCGCTGCCTTTAATCCCAGCACCAGGGAGGCAGCTCTCACACGCAAACTaGAGGGTGCCGCTGATATCT | + |
|
Preference number: 5 (lower is better) Translates to: TQCRAVVALPLIPAPGRQLSHAN*RVPLIS Trigger: AGATATCAGCGGCACCCTCAAGTTTGCGTGTGAGAG...CTGCCTCCCTGGTGCTGGGATTAAAGGCAGCGCCACCACTGCCCGGCACTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219037.2 |
||
| CDS TCA 90 bp | CCCCGTACTCCTTCATTCGGTCACACACCTCCTCAAGCAACTCTGTaGGGTGGGCCTCTGAGCGGGCATAAGGTACCTCCACAACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PRTPSFGHTPPQATL*GGPLSGHKVPPQLT Trigger: AGTCAGTTGTGGAGGTACCTTATGCCCGCTCAGAGGCCCACCTCACAGAGTTGCTTGAGGAGGTGTGTGACCGAATGAAGGAGTACGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 ENSMUST00000219836.2 |
||
| CDS-3UTR CAA 90 bp | GCCATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCCTCTCACACGCAAACTaGAGGGTGCCGCTGATATCT | + |
|
Preference number: 5 (lower is better) Translates to: AIFPSWGCSITFGVGCLLLSHAN*RVPLIS Trigger: AGATATCAGCGGCACCCTCAAGTTTGCGTGTGAGAG...GAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR CAA 90 bp | CAATGCTGCCATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGAGTTTGTCTTTAACGTaGTCAGCCTCTCTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QCCHLPLLGVFHHVWCRLSLSLT*SASLEK Trigger: CTTCTCCAGAGAGGCTGACAACGTTAAAGACAAACT...CAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATGGCAGCATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAATGCTGCCATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGAGTTTGTCTTTAACGTaGTCAGCCTCTCTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RQCCHLPLLGVFHHVWCRSLSLT*SASLEK Trigger: CTTCTCCAGAGAGGCTGACAACGTTAAAGACAAACT...CCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATGGCAGCATTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS-3UTR CAA 90 bp | CATCTTCCCCTCCTGGGGGTGTTCCATCACGTTTGGTGTAGGCTGCTTGCTCCACGCTTACTGCAAAGTTaGTCTTTAACGTTGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLPLLGVFHHVWCRLLAPRLLQS*SLTLSA Trigger: GGCTGACAACGTTAAAGACAAACTTTGCAGTAAGCG...TGGAGCAAGCAGCCTACACCAAACGTGATGGAACACCCCCAGGAGGGGAAGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS TCA 72 bp | CCTTCATTCGGTCACACACCTCCTCAAGCAACTCTGTaGGGTGGGCCTCTGAGCGGGCATAAGGTACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSFGHTPPQATL*GGPLSGHKVPP Trigger: TGGAGGTACCTTATGCCCGCTCAGAGGCCCACCTCACAGAGTTGCTTGAGGAGGTGTGTGACCGAATGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 ENSMUST00000219836.2 |
||
| CDS CCA 72 bp | CTGAGTCAATTCGGATGCCCTGTAAGTCTAGTTCACTaGATTCTCCATTCCGGCTCACGACGCGTACGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSQFGCPVSLVH*ILHSGSRRVRS Trigger: ACTACGTACGCGTCGTGAGCCGGAATGGAGAATCCAGTGAACTAGACTTACAGGGCATCCGAATTGACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 ENSMUST00000219836.2 |
||
| CDS CAA 72 bp | GCATGGTCACATAGATCTGTCCGCTTACTGCAAAGTTaGTCTTTAACGTTGTCAGCCTCTCTGGAGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: AWSHRSVRLLQS*SLTLSASLEKN Trigger: ATTCTTCTCCAGAGAGGCTGACAACGTTAAAGACAAACTTTGCAGTAAGCGGACAGATCTATGTGACCATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS CAA 90 bp | TGGTCACATAGATCTGTCCGCTTACTGCAAAGTTTGTCTTTAACGTaGTCAGCCTCTCTGGAGAAGAATTCGATAAGCTCATCCTCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: WSHRSVRLLQSLSLT*SASLEKNSISSSSY Trigger: ATACGAGGATGAGCTTATCGAATTCTTCTCCAGAGAGGCTGACAACGTTAAAGACAAACTTTGCAGTAAGCGGACAGATCTATGTGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||
| CDS CAA 72 bp | AGATCTGTCCGCTTACTGCAAAGTTTGTCTTTAACGTaGTCAGCCTCTCTGGAGAAGAATTCGATAAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSVRLLQSLSLT*SASLEKNSISS Trigger: TGAGCTTATCGAATTCTTCTCCAGAGAGGCTGACAACGTTAAAGACAAACTTTGCAGTAAGCGGACAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026446.4 ENSMUST00000219037.2 |
||