Pregenerated sensors for CNPY1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044681Ensembl transcript IDs: ENSMUST00000117098.2, ENSMUST00000118882.2, ENSMUST00000120068.2, ENSMUST00000141601.9
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGCTTGGTGAGAAATCCAGGACAATTTCCAATGCCGAGAGCCTaGCGCTCCATCTGCACAAAGGTGCCAGAAGAGCAGCCTGATAAC | + |
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Preference number: 1 (lower is better) Translates to: PCLVRNPGQFPMPRA*RSICTKVPEEQPDN Trigger: GTTATCAGGCTGCTCTTCTGGCACCTTTGTGCAGATGGAGCGTCAGGCTCTCGGCATTGGAAATTGTCCTGGATTTCTCACCAAGCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR CCA 90 bp | CAGCAGACAGAAGATGAACTTCCTTATCACGGCAGTCACACGATGTaGAGGCACACAGTGACCTGTTGGGCTGACTCCACTCCTCTCATA | + |
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Preference number: 1 (lower is better) Translates to: QQTEDELPYHGSHTM*RHTVTCWADSTPLI Trigger: TATGAGAGGAGTGGAGTCAGCCCAACAGGTCACTGTGTGCCTCCACATCGTGTGACTGCCGTGATAAGGAAGTTCATCTTCTGTCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR TCA 90 bp | TTTGTCACGATGCCAAGCAAGAGATTTTCAAACCAATATCACGCATaGGACAAGAACAGCAGACAGAAGATGAACTTCCTTATCACGGCA | + |
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Preference number: 1 (lower is better) Translates to: FVTMPSKRFSNQYHA*DKNSRQKMNFLITA Trigger: TGCCGTGATAAGGAAGTTCATCTTCTGTCTGCTGTTCTTGTCTCATGCGTGATATTGGTTTGAAAATCTCTTGCTTGGCATCGTGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR CCA 90 bp | TTAGTGTTGAGTGGTTCTCTCTGGCTATTCATCTTACTTTGTATTTaGTGTCATTTTAAAGTCAGGAGAATGGCAGCCAGTACAGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LVLSGSLWLFILLCI*CHFKVRRMAASTAS Trigger: AGAAGCTGTACTGGCTGCCATTCTCCTGACTTTAAAATGACACCAAATACAAAGTAAGATGAATAGCCAGAGAGAACCACTCAACACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR TCA 90 bp | GAATACCTTGAATTTGTGGCTGATCAAGAATTTGAGAAATCAAACTaGGTTCTTCTGAAACTGCAAACTGTGTATGGACATGTCAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: EYLEFVADQEFEKSN*VLLKLQTVYGHVRL Trigger: GAGCCTGACATGTCCATACACAGTTTGCAGTTTCAGAAGAACTCAGTTTGATTTCTCAAATTCTTGATCAGCCACAAATTCAAGGTATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR CCA 90 bp | CTTGCTGCTTGGCACTTGTTTCATTTGCTTGCTTTTAGTGTTGAGTaGTTCTCTCTGGCTATTCATCTTACTTTGTATTTGGTGTCATTT | + |
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Preference number: 1 (lower is better) Translates to: LAAWHLFHLLAFSVE*FSLAIHLTLYLVSF Trigger: AAATGACACCAAATACAAAGTAAGATGAATAGCCAGAGAGAACCACTCAACACTAAAAGCAAGCAAATGAAACAAGTGCCAAGCAGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR-3UTR CCA 90 bp | GACGCTCCATCTGCACAAAGGTGCCAGAAGAGCAGCCTGATAACCGCACCCTCTCACACAGTGACCTGTTaGGCTGACTCCACTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: DAPSAQRCQKSSLITAPSHTVTC*ADSTPL Trigger: GAGAGGAGTGGAGTCAGCCCAACAGGTCACTGTGTG...AGAGGGTGCGGTTATCAGGCTGCTCTTCTGGCACCTTTGTGCAGATGGAGCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR CAA 90 bp | TCCCCACTGGGAGGTAGCATCACCTGTCCTTGTATCTCTTCTTCCTaGTCCATTTGGAGCACAGAATCTCAGGGTTACAGGGGGCCTATA | + |
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Preference number: 2 (lower is better) Translates to: SPLGGSITCPCISSS*SIWSTESQGYRGPI Trigger: TATAGGCCCCCTGTAACCCTGAGATTCTGTGCTCCAAATGGACAAGGAAGAAGAGATACAAGGACAGGTGATGCTACCTCCCAGTGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGCCCTGCTCACCAGACTCGGCCCGTTCTTATCTCTGTACAAGCATGTGTCAGATACTTAAGCTATaGAAGGCACATCCCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: EKPCSPDSARSYLCTSMCQILKL*KAHPFL Trigger: CAGAAAGGGATGTGCCTTTCATAGCTTAAGTATCTG...ACACATGCTTGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR GCA 90 bp | GTATATCCTGCTGAATCTGATCTCAGGTTTCTGCATTGCTTACAGAGCACTACAATGTCTGAGAAGCCCTaGTCACCAGACTCGGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: VYPAESDLRFLHCLQSTTMSEKP*SPDSAR Trigger: ACGGGCCGAGTCTGGTGAGCAGGGCTTCTCAGACAT...TGTAGTGCTCTGTAAGCAATGCAGAAACCTGAGATCAGATTCAGCAGGATATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGAGCAGAGACACAGGTCAGAGCTCCTGCTTTGGCTATGTCTTAGGACTTCAGGCAGAGAGACAGTaGCTCTGGCTAATTCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: SRSRDTGQSSCFGYVLGLQAERQ*LWLILN Trigger: ATTGAGAATTAGCCAGAGCCACTGTCTCTCTGCCTG...AAGTCCTAAGACATAGCCAAAGCAGGAGCTCTGACCTGTGTCTCTGCTCCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR-3UTR TCA 90 bp | TTATACACTATGATCAGTGAGGGGAAAACAAACCAAGAGAGACTCAAGCAAGACTGTAAGTCCCATTCCTaGCTGAGAGGGGTGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: LYTMISEGKTNQERLKQDCKSHS*LRGVAL Trigger: TAAAGCCACCCCTCTCAGTCAGGAATGGGACTTACA...GTCTTGCTTGAGTCTCTCTTGGTTTGTTTTCCCCTCACTGATCATAGTGTATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGTTCTTAGCAAACAGCAACTTGCAGAACAAAGCTAAGCATCTTGTTTTGAGGGCCAGTAAACTCTaGTATGATGGCCAGTCGACT | + |
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Preference number: 2 (lower is better) Translates to: GLFLANSNLQNKAKHLVLRASKL*YDGQST Trigger: AGTCGACTGGCCATCATATCAGAGTTTACTGGCCCT...CAAAACAAGATGCTTAGCTTTGTTCTGCAAGTTGCTGTTTGCTAAGAACAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR-3UTR GCA 90 bp | AGTAGGAGCAGAGACACAGGTCAGAGCTCCTGCTTTGGCTATGTCTTAGGACTTGGCACTTGTTTCATTTaGTTGCTTTTAGTGTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SRSRDTGQSSCFGYVLGLGTCFI*LLLVLS Trigger: ACTCAACACTAAAAGCAAGCAAATGAAACAAGTGCC...AAGTCCTAAGACATAGCCAAAGCAGGAGCTCTGACCTGTGTCTCTGCTCCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR-3UTR CCA 90 bp | TCCATCCAAATATGCAAAGGGGTGTTCTGTTTTATAAACTTCTCTTCACCTAAGCACACAGTGACCTGTTaGGCTGACTCCACTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SIQICKGVFCFINFSSPKHTVTC*ADSTPL Trigger: GAGAGGAGTGGAGTCAGCCCAACAGGTCACTGTGTG...CTTAGGTGAAGAGAAGTTTATAAAACAGAACACCCCTTTGCATATTTGGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTTGTCCATTTGGAGCACAGAATCTCAGGGTTACAGGGGGCCTATAATACTATGTGATAGCCTTTaGAATCATCTGAACTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SSLSIWSTESQGYRGPIILCDSL*NHLNSG Trigger: CCCTGAGTTCAGATGATTCCAAAGGCTATCACATAG...TATTATAGGCCCCCTGTAACCCTGAGATTCTGTGCTCCAAATGGACAAGGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATCACAGAGCAGAGGTATaGTCAAGCACACTGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QLHRALRFILQGYSFYFYHRAEV*SSTLRR Trigger: CCTCCTCAGTGTGCTTGAGCATACCTCTGCTCTGTG...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCACGGCCAGATTTAATGCTCTATTGCCAACCCAGCTTCCATCCAAATATTGGGGTTTGTCACGATaGCAAGCAAGAGATTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: FPTARFNALLPTQLPSKYWGLSR*QARDFQ Trigger: TTGAAAATCTCTTGCTTGGCATCGTGACAAACCCCA...ATATTTGGATGGAAGCTGGGTTGGCAATAGAGCATTAAATCTGGCCGTGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAATGCAAATTTAGCAGAGACAATGAGAACACCCAGGAGAAACTGTTATTACCCACACAGAACCTTTTaGAATAACCAGCCCACGGCA | + |
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Preference number: 2 (lower is better) Translates to: LNANLAETMRTPRRNCYYPHRTF*NNQPTA Trigger: TGCCGTGGGCTGGTTATTCCAAAAGGTTCTGTGTGG...GTAATAACAGTTTCTCCTGGGTGTTCTCATTGTCTCTGCTAAATTTGCATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR-3UTR TCA 90 bp | GTATATCCTGCTGAATCTGATCTCAGGTTTCTGCATTGCTTACAGAGCACTACACAGATACTTAAGCTATaGAAGGCACATCCCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VYPAESDLRFLHCLQSTTQILKL*KAHPFL Trigger: CAGAAAGGGATGTGCCTTTCATAGCTTAAGTATCTG...TGTAGTGCTCTGTAAGCAATGCAGAAACCTGAGATCAGATTCAGCAGGATATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTATGGTGTCCATCAAAGATGACTGTGGCTGATTCAGTTGTTCACAAGCAATTTGAGCACCATATTTaGTGGGTCATTGGCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: HLWCPSKMTVADSVVHKQFEHHI*WVIGLC Trigger: ACACAGGCCAATGACCCATCAAATATGGTGCTCAAA...TTGCTTGTGAACAACTGAATCAGCCACAGTCATCTTTGATGGACACCATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTATGGTGTCCATCAAAGATGACTGTGGCTGATTCAGTTGTTCACAAGCAATGGGAAGTATGGCTATaGACTTATGTGACTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: HLWCPSKMTVADSVVHKQWEVWL*TYVTAT Trigger: TGTGGCAGTCACATAAGTTCATAGCCATACTTCCCA...TTGCTTGTGAACAACTGAATCAGCCACAGTCATCTTTGATGGACACCATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATCTGTACAAGCATGTGTaGACACAGAGCAGAGGTATG | + |
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Preference number: 2 (lower is better) Translates to: QLHRALRFILQGYSFYFYLYKHV*TQSRGM Trigger: CATACCTCTGCTCTGTGTTCACACATGCTTGTACAG...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATTTTGAGCACCATATTTaGTGGGTCATTGGCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QLHRALRFILQGYSFYFYFEHHI*WVIGLC Trigger: ACACAGGCCAATGACCCATCAAATATGGTGCTCAAA...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCTGATTAATCTTACAGGTTATAGAAATAAGATACAAGGACCAGGTTCCCCCTGGGGTTTGTCACGATaGCAAGCAAGAGATTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: MLINLTGYRNKIQGPGSPWGLSR*QARDFQ Trigger: TTGAAAATCTCTTGCTTGGCATCGTGACAAACCCCA...GGGGGAACCTGGTCCTTGTATCTTATTTCTATAACCTGTAAGATTAATCAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR CAA 90 bp | CCTTTTGGAATAACCAGCCCACGGCATTTGTTACAACTGAATACCTaGAATTTGTGGCTGATCAAGAATTTGAGAAATCAAACTGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: PFGITSPRHLLQLNT*NLWLIKNLRNQTEF Trigger: GAACTCAGTTTGATTTCTCAAATTCTTGATCAGCCACAAATTCAAGGTATTCAGTTGTAACAAATGCCGTGGGCTGGTTATTCCAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATGGCTATGAACTTATGTaGCTGCCACACTTCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: QLHRALRFILQGYSFYFYGYELM*LPHFCN Trigger: ATTACAGAAGTGTGGCAGTCACATAAGTTCATAGCC...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATCTGATCTCAGGTTTCTaGATTGCTTACAGAGCACTA | + |
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Preference number: 2 (lower is better) Translates to: QLHRALRFILQGYSFYFYLISGF*IAYRAL Trigger: TAGTGCTCTGTAAGCAATGCAGAAACCTGAGATCAG...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGTTCTTAGCAAACAGCAACTTGCAGAACAAAGCTAAGCATCTTGTTTTGTTGAGTGGTTCTCTCTaGCTATTCATCTTACTTTGT | + |
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Preference number: 2 (lower is better) Translates to: GLFLANSNLQNKAKHLVLLSGSL*LFILLC Trigger: ACAAAGTAAGATGAATAGCCAGAGAGAACCACTCAA...CAAAACAAGATGCTTAGCTTTGTTCTGCAAGTTGCTGTTTGCTAAGAACAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATCAGAGTAAGAAAACTTaGACTATCTTGTTAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: QLHRALRFILQGYSFYFYQSKKT*TILLVG Trigger: ACCCACTAACAAGATAGTTCAAGTTTTCTTACTCTG...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR TCA 72 bp | AGCTCTATCCACCATGCCGGGGCACAGCGGTGCCTTTaGCTCTGCACACCCCAGCTGCTGTTAGGAAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: SSIHHAGAQRCL*LCTPQLLLGRV Trigger: AACTCTTCCTAACAGCAGCTGGGGTGTGCAGAGTCAAAGGCACCGCTGTGCCCCGGCATGGTGGATAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120068.2 |
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| 3UTR GCA 72 bp | ATGAAGGAGCACCATCTGAGAGAGCTCTATCCACCATaGCGGGGCACAGCGGTGCCTTTGACTCTGCACACC | + |
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Preference number: 3 (lower is better) Translates to: MKEHHLRELYPP*RGTAVPLTLHT Trigger: GGTGTGCAGAGTCAAAGGCACCGCTGTGCCCCGGCATGGTGGATAGAGCTCTCTCAGATGGTGCTCCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120068.2 |
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| 3UTR TCA 72 bp | GTGAGAAATCCAGGACAATTTCCAATGCCGAGAGCCTaGCGCTCCATCTGCACAAAGGTGCCAGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: VRNPGQFPMPRA*RSICTKVPEEQ Trigger: CTGCTCTTCTGGCACCTTTGTGCAGATGGAGCGTCAGGCTCTCGGCATTGGAAATTGTCCTGGATTTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR CCA 72 bp | GAAGATGAACTTCCTTATCACGGCAGTCACACGATGTaGAGGCACACAGTGACCTGTTGGGCTGACTCCACT | + |
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Preference number: 3 (lower is better) Translates to: EDELPYHGSHTM*RHTVTCWADST Trigger: AGTGGAGTCAGCCCAACAGGTCACTGTGTGCCTCCACATCGTGTGACTGCCGTGATAAGGAAGTTCATCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR CCA 72 bp | CAGGAGAATGGCAGCCAGTACAGCTTCTCTCTCCTATaGCTACTTCCCAGCAAAGCAGGCATCTCACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: QENGSQYSFSLL*LLPSKAGISQE Trigger: TTCTTGTGAGATGCCTGCTTTGCTGGGAAGTAGCCATAGGAGAGAGAAGCTGTACTGGCTGCCATTCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR TCA 72 bp | AGACTCGGCCCGTTCTTATCTCTGTACAAGCATGTGTaGACACAGAGCAGAGGTATGCTCAAGCACACTGAG | + |
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Preference number: 3 (lower is better) Translates to: RLGPFLSLYKHV*TQSRGMLKHTE Trigger: CTCAGTGTGCTTGAGCATACCTCTGCTCTGTGTTCACACATGCTTGTACAGAGATAAGAACGGGCCGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR TCA 72 bp | CCTTTGGAATCATCTGAACTCAGGGCCAGTAAACTCTaGTATGATGGCCAGTCGACTGTGCGACGTATTCAC | + |
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Preference number: 3 (lower is better) Translates to: PLESSELRASKL*YDGQSTVRRIH Trigger: GTGAATACGTCGCACAGTCGACTGGCCATCATATCAGAGTTTACTGGCCCTGAGTTCAGATGATTCCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR-3UTR CAA 90 bp | CTGAGAAGCCCTGCTCACCAGACTCGGCCCGTTCTTATCTCTGTACAAGCATGTAAACCCTACCTTCTGTaGTTAGCACAGATACTTAAG | + |
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Preference number: 3 (lower is better) Translates to: LRSPAHQTRPVLISVQACKPYLL*LAQILK Trigger: CTTAAGTATCTGTGCTAACAACAGAAGGTAGGGTTT...ACATGCTTGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAGCATGTGTGAACACAGAGCAGAGGTATGCTCAAGCACACTGAGGAGGGGCAAACCCTACCTTCTGTaGTTAGCACAGATACTTAAG | + |
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Preference number: 3 (lower is better) Translates to: TSMCEHRAEVCSSTLRRGKPYLL*LAQILK Trigger: CTTAAGTATCTGTGCTAACAACAGAAGGTAGGGTTT...GCCCCTCCTCAGTGTGCTTGAGCATACCTCTGCTCTGTGTTCACACATGCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR TCA 72 bp | GCTTACACGCTTCCTCTAACACAAGTTCCCCCTTCCTaGCTTCGATTACTCACCCTGACTTTCAAGGAACAT | + |
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Preference number: 3 (lower is better) Translates to: AYTLPLTQVPPS*LRLLTLTFKEH Trigger: ATGTTCCTTGAAAGTCAGGGTGAGTAATCGAAGTCAGGAAGGGGGAACTTGTGTTAGAGGAAGCGTGTAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR GCA 72 bp | AGACAGAGGCTAACACCCCAACAGGTCTTTCTGGAATaGCTGGGTGTTCATGTAGTCATTTATGGTGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: RQRLTPQQVFLE*LGVHVVIYGVH Trigger: ATGGACACCATAAATGACTACATGAACACCCAGGCATTCCAGAAAGACCTGTTGGGGTGTTAGCCTCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR CCA 72 bp | ATCACCTGTCCTTGTATCTCTTCTTCCTTGTCCATTTaGAGCACAGAATCTCAGGGTTACAGGGGGCCTATA | + |
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Preference number: 3 (lower is better) Translates to: ITCPCISSSLSI*STESQGYRGPI Trigger: TATAGGCCCCCTGTAACCCTGAGATTCTGTGCTCCAAATGGACAAGGAAGAAGAGATACAAGGACAGGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| 3UTR GCA 72 bp | AACACATTCATTTTCTTAAGGATGTCTGAGAAGCCCTaGTCACCAGACTCGGCCCGTTCTTATCTCTGTACA | + |
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Preference number: 3 (lower is better) Translates to: NTFIFLRMSEKP*SPDSARSYLCT Trigger: TGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTCAGACATCCTTAAGAAAATGAATGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR GCA 72 bp | CCTGTGTATATCCTGCTGAATCTGATCTCAGGTTTCTaGATTGCTTACAGAGCACTACACGGGGTTAAACCA | + |
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Preference number: 3 (lower is better) Translates to: PVYILLNLISGF*IAYRALHGVKP Trigger: TGGTTTAACCCCGTGTAGTGCTCTGTAAGCAATGCAGAAACCTGAGATCAGATTCAGCAGGATATACACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| 3UTR CCA 72 bp | ATCAAACTGAGTTCTTCTGAAACTGCAAACTGTGTATaGACATGTCAGGCTCATTTGCTCAGACCCACCCTT | + |
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Preference number: 3 (lower is better) Translates to: IKLSSSETANCV*TCQAHLLRPTL Trigger: AAGGGTGGGTCTGAGCAAATGAGCCTGACATGTCCATACACAGTTTGCAGTTTCAGAAGAACTCAGTTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| 3UTR TCA 72 bp | CCCTACCTTCTGTTGTTAGCACAGATACTTAAGCTATaGAAGGCACATCCCTTTCTGGACCAGGATACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PYLLLLAQILKL*KAHPFLDQDTK Trigger: TTTTGTATCCTGGTCCAGAAAGGGATGTGCCTTTCATAGCTTAAGTATCTGTGCTAACAACAGAAGGTAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| 3UTR TCA 72 bp | AAATATAAGAGTTTCCAGATCTGTAAGTCCCATTCCTaGCTGAGAGGGGTGGCTTTAAAACCACCACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KYKSFQICKSHS*LRGVALKPPHR Trigger: TCTGTGTGGTGGTTTTAAAGCCACCCCTCTCAGTCAGGAATGGGACTTACAGATCTGGAAACTCTTATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTTATGGTGTCCATCAAAGATGACTGTGGCTGATTCAGTTGTTCACAAGCAACACAGTGCTATTCCTTaGAGCACCATATTTGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: HLWCPSKMTVADSVVHKQHSAIP*STIFDG Trigger: CCCATCAAATATGGTGCTCAAAGGAATAGCACTGTG...TTGCTTGTGAACAACTGAATCAGCCACAGTCATCTTTGATGGACACCATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATCACCTGTCCTTGTATCTCTTCTTCCTTGTCCATTTGGAGCACAGAATCTCTGGCTGATCAAGAATTaGAGAAATCAAACTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASPVLVSLLPCPFGAQNLWLIKN*RNQTEF Trigger: GAACTCAGTTTGATTTCTCAAATTCTTGATCAGCCA...GAGATTCTGTGCTCCAAATGGACAAGGAAGAAGAGATACAAGGACAGGTGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| 3UTR CCA 72 bp | TACTTTGTATTTGGTGTCATTTTAAAGTCAGGAGAATaGCAGCCAGTACAGCTTCTCTCTCCTATGGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: YFVFGVILKSGE*QPVQLLSPMAT Trigger: AGTAGCCATAGGAGAGAGAAGCTGTACTGGCTGCCATTCTCCTGACTTTAAAATGACACCAAATACAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACGGCATTTGTTACAACTGAATACCTTGAATTTGTGGCTGATCAAGAATTTGAGATTTAATGCTCTATaGCCAACCCAGCTTCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: PRHLLQLNTLNLWLIKNLRFNAL*PTQLPS Trigger: GGATGGAAGCTGGGTTGGCAATAGAGCATTAAATCT...CAAATTCTTGATCAGCCACAAATTCAAGGTATTCAGTTGTAACAAATGCCGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| 3UTR TCA 72 bp | ACAAGCTCCCGCTGGAATGGAATTCTAAATAGAAAGTaGCCTTGTTGTCTACCCAGAGTAAGAAAACTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TSSRWNGILNRK*PCCLPRVRKLE Trigger: TTCAAGTTTTCTTACTCTGGGTAGACAACAAGGTCACTTTCTATTTAGAATTCCATTCCAGCGGGAGCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| 3UTR CCA 72 bp | CACAGATACTTAAGCTATGAAAGGCACATCCCTTTCTaGACCAGGATACAAAAATCTAACGTCTATGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HRYLSYERHIPF*TRIQKSNVYGF Trigger: AAAGCCATAGACGTTAGATTTTTGTATCCTGGTCCAGAAAGGGATGTGCCTTTCATAGCTTAAGTATCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| 3UTR TCA 72 bp | AAAGTGACCTTGTTGTCTACCCAGAGTAAGAAAACTTaGACTATCTTGTTAGTGGGTTTGTGGCTCTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: KVTLLSTQSKKT*TILLVGLWLSY Trigger: ATAAGAGAGCCACAAACCCACTAACAAGATAGTTCAAGTTTTCTTACTCTGGGTAGACAACAAGGTCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| 3UTR TCA 72 bp | CACAAGTTCCCCCTTCCTGACTTCGATTACTCACCCTaGCTTTCAAGGAACATTAATGTTGTTGTTATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: HKFPLPDFDYSP*LSRNINVVVIN Trigger: ATTAATAACAACAACATTAATGTTCCTTGAAAGTCAGGGTGAGTAATCGAAGTCAGGAAGGGGGAACTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATATCTTGTTAGTGGGTTaGTGGCTCTCTTATCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLHRALRFILQGYSFYFYILLVG*WLSYLE Trigger: TTCTAGATAAGAGAGCCACAAACCCACTAACAAGAT...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAATGCAAATTTAGCAGAGACAATGAGAACACCCAGGAGAAACTGTTATTACTGGCTGATCAAGAATTaGAGAAATCAAACTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LNANLAETMRTPRRNCYYWLIKN*RNQTEF Trigger: GAACTCAGTTTGATTTCTCAAATTCTTGATCAGCCA...GTAATAACAGTTTCTCCTGGGTGTTCTCATTGTCTCTGCTAAATTTGCATTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAATGCAAATTTAGCAGAGACAATGAGAACACCCAGGAGAAACTGTTATTACCTGAATACCTTGAATTaGTGGCTGATCAAGAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LNANLAETMRTPRRNCYYLNTLN*WLIKNL Trigger: CAAATTCTTGATCAGCCACAAATTCAAGGTATTCAG...GTAATAACAGTTTCTCCTGGGTGTTCTCATTGTCTCTGCTAAATTTGCATTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGATTAATCTTACAGGTTATAGAAATAAGATACAAGGACCAGGTTCCCCCCTGAATACCTTGAATTaGTGGCTGATCAAGAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: MLINLTGYRNKIQGPGSPLNTLN*WLIKNL Trigger: CAAATTCTTGATCAGCCACAAATTCAAGGTATTCAG...GGGGGAACCTGGTCCTTGTATCTTATTTCTATAACCTGTAAGATTAATCAGCAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| 3UTR CCA 72 bp | TGGCACTTGTTTCATTTGCTTGCTTTTAGTGTTGAGTaGTTCTCTCTGGCTATTCATCTTACTTTGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: WHLFHLLAFSVE*FSLAIHLTLYL Trigger: CAAATACAAAGTAAGATGAATAGCCAGAGAGAACCACTCAACACTAAAAGCAAGCAAATGAAACAAGTGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| 3UTR CCA 72 bp | TTCATTTGCTTGCTTTTAGTGTTGAGTGGTTCTCTCTaGCTATTCATCTTACTTTGTATTTGGTGTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: FICLLLVLSGSL*LFILLCIWCHF Trigger: AAAATGACACCAAATACAAAGTAAGATGAATAGCCAGAGAGAACCACTCAACACTAAAAGCAAGCAAATGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| CDS-3UTR CCA 90 bp | TATCACGGCAGTCACACGATGTGGAGGCACACAGTGACCTGTTGGGCTGACTCCGGTAGGAGCCCACCTTaGTTTTCTTCTGTCGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YHGSHTMWRHTVTCWADSGRSPP*FSSVEP Trigger: AGGCTCGACAGAAGAAAACCAAGGTGGGCTCCTACC...GGAGTCAGCCCAACAGGTCACTGTGTGCCTCCACATCGTGTGACTGCCGTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGCCCTGCTCACCAGACTCGGCCCGTTCTTATCTCTGTACAAGCATGTTGTAGCTCTCCTTTCTaGCATAGGGGTCTGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSPAHQTRPVLISVQACCSSPF*HRGLVP Trigger: GGGGACCAGACCCCTATGCCAGAAAGGAGAGCTACA...ACATGCTTGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGCATGTGTGAACACAGAGCAGAGGTATGCTCAAGCACACTGAGGAGGGGCTGTAGCTCTCCTTTCTaGCATAGGGGTCTGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSMCEHRAEVCSSTLRRGCSSPF*HRGLVP Trigger: GGGGACCAGACCCCTATGCCAGAAAGGAGAGCTACA...GCCCCTCCTCAGTGTGCTTGAGCATACCTCTGCTCTGTGTTCACACATGCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCCCTGCTCACCAGACTCGGCCCGTTCTTATCTCTGTACAAGCATGTGTTCTGGCATAGGGGTCTaGTCCCCAGAAGTCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EKPCSPDSARSYLCTSMCSGIGV*SPEVCV Trigger: TACACAGACTTCTGGGGACCAGACCCCTATGCCAGA...ACACATGCTTGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGCCCTGCTCACCAGACTCGGCCCGTTCTTATCTCTGTACAAGCATGTAGCATATCAGCTAGATaGTTTGCCTCCTGGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LRSPAHQTRPVLISVQACSISAR*FASWAI Trigger: TATTGCCCAGGAGGCAAACCATCTAGCTGATATGCT...ACATGCTTGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCTGAGAAGCCCTGCTCACCAGACTCGGCCCGTTCTTATCTCTGTACAAGCCTTCATACTTTTCAATaGTGGCTTCGCACGCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: MSEKPCSPDSARSYLCTSLHTFQ*WLRTRI Trigger: AATTCGCGTGCGAAGCCATCATTGAAAAGTATGAAG...GCTTGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTCAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGCATGTGTGAACACAGAGCAGAGGTATGCTCAAGCACACTGAGGAGGGGCCTTCATACTTTTCAATaGTGGCTTCGCACGCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: TSMCEHRAEVCSSTLRRGLHTFQ*WLRTRI Trigger: AATTCGCGTGCGAAGCCATCATTGAAAAGTATGAAG...GCCCCTCCTCAGTGTGCTTGAGCATACCTCTGCTCTGTGTTCACACATGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR CCA 90 bp | GATGGGTCATTGGCCTGTGTATATCCTGCTGAATCTGATCTCAGGTTTCTGCATTCTGGCATAGGGGTCTaGTCCCCAGAAGTCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DGSLACVYPAESDLRFLHSGIGV*SPEVCV Trigger: TACACAGACTTCTGGGGACCAGACCCCTATGCCAGA...ATGCAGAAACCTGAGATCAGATTCAGCAGGATATACACAGGCCAATGACCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGAAGCCCTGCTCACCAGACTCGGCCCGTTCTTATCTCTGTACAAGCATGTATCAGACACAGTACCTaGTTTTTCATTGCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPAHQTRPVLISVQACIRHST*FFIAQH Trigger: ATGCTGTGCAATGAAAAATCAGGTACTGTGTCTGAT...ACATGCTTGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR TCA 90 bp | GTATATCCTGCTGAATCTGATCTCAGGTTTCTGCATTGCTTACAGAGCACTACAGTTGGAGCTGGTAAGTaGGGCTGGGAGCACGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VYPAESDLRFLHCLQSTTVGAGK*GWEHVL Trigger: TAACACGTGCTCCCAGCCTCACTTACCAGCTCCAAC...TGTAGTGCTCTGTAAGCAATGCAGAAACCTGAGATCAGATTCAGCAGGATATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR GCA 90 bp | GTATATCCTGCTGAATCTGATCTCAGGTTTCTGCATTGCTTACAGAGCACTACACCTGTGGATGAGCTGTaGAAGGCTGAGTTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYPAESDLRFLHCLQSTTPVDEL*KAELEL Trigger: CAGCTCCAACTCAGCCTTGCACAGCTCATCCACAGG...TGTAGTGCTCTGTAAGCAATGCAGAAACCTGAGATCAGATTCAGCAGGATATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR TCA 90 bp | TTACAGGGGGCCTATAATACAACTAACCACAGACACTTTGCAAAAGCACAGATTTCTGTCGAGCCTTGGTaGTGTCATACTCCACCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQGAYNTTNHRHFAKAQISVEPW*CHTPPR Trigger: ACGAGGTGGAGTATGACATCACCAAGGCTCGACAGA...AATCTGTGCTTTTGCAAAGTGTCTGTGGTTAGTTGTATTATAGGCCCCCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATGTTGGAGCTGGTAAGTaGGGCTGGGAGCACGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QLHRALRFILQGYSFYFYVGAGK*GWEHVL Trigger: TAACACGTGCTCCCAGCCTCACTTACCAGCTCCAAC...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATCCTGTGGATGAGCTGTaGAAGGCTGAGTTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLHRALRFILQGYSFYFYPVDEL*KAELEL Trigger: CAGCTCCAACTCAGCCTTGCACAGCTCATCCACAGG...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR CCA 90 bp | GATGGGTCATTGGCCTGTGTATATCCTGCTGAATCTGATCTCAGGTTTCTGCATAGATGGTTTGCCTCCTaGGCAATAAGTTCGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: DGSLACVYPAESDLRFLHRWFAS*AISSNI Trigger: GATATTCGAACTTATTGCCCAGGAGGCAAACCATCT...ATGCAGAAACCTGAGATCAGATTCAGCAGGATATACACAGGCCAATGACCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR CCA 90 bp | CATTTATGGTGTCCATCAAAGATGACTGTGGCTGATTCAGTTGTTCACAAGCAAAAGAAGGCTCTGGCATaGGGTTCTGTAGCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLWCPSKMTVADSVVHKQKKALA*GSVALL Trigger: AAGGAGAGCTACAGAACCCCATGCCAGAGCCTTCTT...TTGCTTGTGAACAACTGAATCAGCCACAGTCATCTTTGATGGACACCATAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| 3UTR CAA 72 bp | AGTGCTATTCCTTTGAGCACCATATTTGATGGGTCATaGGCCTGTGTATATCCTGCTGAATCTGATCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAIPLSTIFDGS*ACVYPAESDLR Trigger: CCTGAGATCAGATTCAGCAGGATATACACAGGCCAATGACCCATCAAATATGGTGCTCAAAGGAATAGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| 3UTR CAA 72 bp | TTCAGCAGTCTTGGCTTGTTCTTAGCAAACAGCAACTaGCAGAACAAAGCTAAGCATCTTGTTTTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSSLGLFLANSN*QNKAKHLVLAS Trigger: GCTGGCCAAAACAAGATGCTTAGCTTTGTTCTGCAAGTTGCTGTTTGCTAAGAACAAGCCAAGACTGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCCACGGCCAGATTTAATGCTCTATTGCCAACCCAGCTTCCATCCAAATATCTTCATACTTTTCAATaGTGGCTTCGCACGCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: FPTARFNALLPTQLPSKYLHTFQ*WLRTRI Trigger: AATTCGCGTGCGAAGCCATCATTGAAAAGTATGAAG...ATATTTGGATGGAAGCTGGGTTGGCAATAGAGCATTAAATCTGGCCGTGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| CDS-3UTR CCA 90 bp | GACTTGGGGTTTGTCACGATGCCAAGCAAGAGATTTTCAAACCAATATCACGCAAGATGGTTTGCCTCCTaGGCAATAAGTTCGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: DLGFVTMPSKRFSNQYHARWFAS*AISSNI Trigger: GATATTCGAACTTATTGCCCAGGAGGCAAACCATCT...TGCGTGATATTGGTTTGAAAATCTCTTGCTTGGCATCGTGACAAACCCCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCCACGGCCAGATTTAATGCTCTATTGCCAACCCAGCTTCCATCCAAATATAGATGGTTTGCCTCCTaGGCAATAAGTTCGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: FPTARFNALLPTQLPSKYRWFAS*AISSNI Trigger: GATATTCGAACTTATTGCCCAGGAGGCAAACCATCT...ATATTTGGATGGAAGCTGGGTTGGCAATAGAGCATTAAATCTGGCCGTGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCATAGAGCTCTTAGGTTTATTCTCCAGGGCTATAGTTTCTATTTTTATAAGAAGGCTCTGGCATaGGGTTCTGTAGCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLHRALRFILQGYSFYFYKKALA*GSVALL Trigger: AAGGAGAGCTACAGAACCCCATGCCAGAGCCTTCTT...ATAAAAATAGAAACTATAGCCCTGGAGAATAAACCTAAGAGCTCTATGGAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR TCA 90 bp | TTATACACTATGATCAGTGAGGGGAAAACAAACCAAGAGAGACTCAAGCAAGACCTTCATACTTTTCAATaGTGGCTTCGCACGCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LYTMISEGKTNQERLKQDLHTFQ*WLRTRI Trigger: AATTCGCGTGCGAAGCCATCATTGAAAAGTATGAAG...GTCTTGCTTGAGTCTCTCTTGGTTTGTTTTCCCCTCACTGATCATAGTGTATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| CDS-3UTR CCA 90 bp | CATTTATGGTGTCCATCAAAGATGACTGTGGCTGATTCAGTTGTTCACAAGCAAAGATGGTTTGCCTCCTaGGCAATAAGTTCGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: HLWCPSKMTVADSVVHKQRWFAS*AISSNI Trigger: GATATTCGAACTTATTGCCCAGGAGGCAAACCATCT...TTGCTTGTGAACAACTGAATCAGCCACAGTCATCTTTGATGGACACCATAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| 3UTR CAA 72 bp | ATTTTCATCTTGCTGCTTGGCACTTGTTTCATTTGCTaGCTTTTAGTGTTGAGTGGTTCTCTCTGGCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: IFILLLGTCFIC*LLVLSGSLWLF Trigger: GAATAGCCAGAGAGAACCACTCAACACTAAAAGCAAGCAAATGAAACAAGTGCCAAGCAGCAAGATGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| 3UTR CAA 72 bp | AGCCCACGGCATTTGTTACAACTGAATACCTTGAATTaGTGGCTGATCAAGAATTTGAGAAATCAAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPRHLLQLNTLN*WLIKNLRNQTE Trigger: CTCAGTTTGATTTCTCAAATTCTTGATCAGCCACAAATTCAAGGTATTCAGTTGTAACAAATGCCGTGGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| 3UTR CAA 72 bp | CTAACTCTGAGAAATTTTCATCTTGCTGCTTGGCACTaGTTTCATTTGCTTGCTTTTAGTGTTGAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLRNFHLAAWH*FHLLAFSVEWF Trigger: GAACCACTCAACACTAAAAGCAAGCAAATGAAACAAGTGCCAAGCAGCAAGATGAAAATTTCTCAGAGTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
||
| 3UTR CAA 72 bp | ATAACCAGCCCACGGCATTTGTTACAACTGAATACCTaGAATTTGTGGCTGATCAAGAATTTGAGAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITSPRHLLQLNT*NLWLIKNLRNQ Trigger: TTGATTTCTCAAATTCTTGATCAGCCACAAATTCAAGGTATTCAGTTGTAACAAATGCCGTGGGCTGGTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
||
| CDS GCA 90 bp | GCCAGGCTGGCAGTAAGACAGCCAGGCTACCCTGTGGATGAGCTGTaGAAGGCTGAGTTGGAGCTGGTAAGTGAGGCTGGGAGCACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ARLAVRQPGYPVDEL*KAELELVSEAGSTC Trigger: ACACGTGCTCCCAGCCTCACTTACCAGCTCCAACTCAGCCTTGCACAGCTCATCCACAGGGTAGCCTGGCTGTCTTACTGCCAGCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAGCCCTGCTCACCAGACTCGGCCCGTTCTTATCTCTGTACAAGCATGTGTCTGAAATACTTCTGCTaGGTCACTGGGTCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKPCSPDSARSYLCTSMCLKYFC*VTGSSS Trigger: GGAGGACGACCCAGTGACCAAGCAGAAGTATTTCAG...ACACATGCTTGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS-3UTR CAA 90 bp | GATGGGTCATTGGCCTGTGTATATCCTGCTGAATCTGATCTCAGGTTTCTGCATCTGAAATACTTCTGCTaGGTCACTGGGTCGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: DGSLACVYPAESDLRFLHLKYFC*VTGSSS Trigger: GGAGGACGACCCAGTGACCAAGCAGAAGTATTTCAG...ATGCAGAAACCTGAGATCAGATTCAGCAGGATATACACAGGCCAATGACCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGCCCTGCTCACCAGACTCGGCCCGTTCTTATCTCTGTACAAGCATGTGTTATTCTTTGTATATTTaGTCTCCCTTCCTCGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: EKPCSPDSARSYLCTSMCYSLYI*SPFLGA Trigger: TGCTCCGAGGAAGGGAGACAAAATATACAAAGAATA...ACACATGCTTGTACAGAGATAAGAACGGGCCGAGTCTGGTGAGCAGGGCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS-3UTR CAA 90 bp | TGTCACGATGCCAAGCAAGAGATTTTCAAACCAATATCACGCATGAGACAAGAACTGAAATACTTCTGCTaGGTCACTGGGTCGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: CHDAKQEIFKPISRMRQELKYFC*VTGSSS Trigger: GGAGGACGACCCAGTGACCAAGCAGAAGTATTTCAG...TTCTTGTCTCATGCGTGATATTGGTTTGAAAATCTCTTGCTTGGCATCGTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| CDS-3UTR CAA 90 bp | TCCATCCAAATATGCAAAGGGGTGTTCTGTTTTATAAACTTCTCTTCACCTAAGCTGAAATACTTCTGCTaGGTCACTGGGTCGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SIQICKGVFCFINFSSPKLKYFC*VTGSSS Trigger: GGAGGACGACCCAGTGACCAAGCAGAAGTATTTCAG...CTTAGGTGAAGAGAAGTTTATAAAACAGAACACCCCTTTGCATATTTGGATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| CDS CCA 90 bp | TCAGACACAGTACCTGATTTTTCATTGCACAGCATATCAGCTAGATaGTTTGCCTCCTGGGCAATAAGTTCGAATATCTCATCTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: SDTVPDFSLHSISAR*FASWAISSNISSSY Trigger: GTATGAAGATGAGATATTCGAACTTATTGCCCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGAAAAATCAGGTACTGTGTCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS CCA 90 bp | GTGCCACATAGATCTGATTTTTCATTGCACAGCATATCAGCTAGATaGTTTGCCTCCTGGGCAATAAGTTCGAATATCTCATCTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: VPHRSDFSLHSISAR*FASWAISSNISSSY Trigger: GTATGAAGATGAGATATTCGAACTTATTGCCCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGAAAAATCAGATCTATGTGGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| CDS-3UTR CAA 90 bp | CATTTATGGTGTCCATCAAAGATGACTGTGGCTGATTCAGTTGTTCACAAGCAAGTACCTGATTTTTCATaGCACAGCATATCAGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: HLWCPSKMTVADSVVHKQVPDFS*HSISAR Trigger: TCTAGCTGATATGCTGTGCAATGAAAAATCAGGTAC...TTGCTTGTGAACAACTGAATCAGCCACAGTCATCTTTGATGGACACCATAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS CCA 90 bp | CCTGATTTTTCATTGCACAGCATATCAGCTAGATGGTTTGCCTCCTaGGCAATAAGTTCGAATATCTCATCTTCATACTTTTCAATGATG | + |
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Preference number: 5 (lower is better) Translates to: PDFSLHSISARWFAS*AISSNISSSYFSMM Trigger: CATCATTGAAAAGTATGAAGATGAGATATTCGAACTTATTGCCCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGAAAAATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS-3UTR CAA 90 bp | GCTTACAGAGCACTACACGGGGTTAAACCATTGTCTTCATATAAACACATTCATGTACCTGATTTTTCATaGCACAGCATATCAGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: AYRALHGVKPLSSYKHIHVPDFS*HSISAR Trigger: TCTAGCTGATATGCTGTGCAATGAAAAATCAGGTAC...ATGAATGTGTTTATATGAAGACAATGGTTTAACCCCGTGTAGTGCTCTGTAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS-3UTR CAA 90 bp | TGTCACGATGCCAAGCAAGAGATTTTCAAACCAATATCACGCATGAGACAAGAAAGATCTGATTTTTCATaGCACAGCATATCAGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: CHDAKQEIFKPISRMRQERSDFS*HSISAR Trigger: TCTAGCTGATATGCTGTGCAATGAAAAATCAGATCT...TTCTTGTCTCATGCGTGATATTGGTTTGAAAATCTCTTGCTTGGCATCGTGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| CDS CCA 90 bp | TCTGATTTTTCATTGCACAGCATATCAGCTAGATGGTTTGCCTCCTaGGCAATAAGTTCGAATATCTCATCTTCATACTTTTCAATGATG | + |
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Preference number: 5 (lower is better) Translates to: SDFSLHSISARWFAS*AISSNISSSYFSMM Trigger: CATCATTGAAAAGTATGAAGATGAGATATTCGAACTTATTGCCCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGAAAAATCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| CDS-3UTR CAA 90 bp | CTGAATGCAAATTTAGCAGAGACAATGAGAACACCCAGGAGAAACTGTTATTACAGATCTGATTTTTCATaGCACAGCATATCAGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: LNANLAETMRTPRRNCYYRSDFS*HSISAR Trigger: TCTAGCTGATATGCTGTGCAATGAAAAATCAGATCT...GTAATAACAGTTTCTCCTGGGTGTTCTCATTGTCTCTGCTAAATTTGCATTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| CDS GCA 72 bp | GCAGTAAGACAGCCAGGCTACCCTGTGGATGAGCTGTaGAAGGCTGAGTTGGAGCTGGTAAGTGAGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AVRQPGYPVDEL*KAELELVSEAG Trigger: CCCAGCCTCACTTACCAGCTCCAACTCAGCCTTGCACAGCTCATCCACAGGGTAGCCTGGCTGTCTTACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS CAA 72 bp | CCAGGCTACCCTGTGGATGAGCTGTGCAAGGCTGAGTaGGAGCTGGTAAGTGAGGCTGGGAGCACGTGTTAC | + |
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Preference number: 6 (lower is better) Translates to: PGYPVDELCKAE*ELVSEAGSTCY Trigger: GTAACACGTGCTCCCAGCCTCACTTACCAGCTCCAACTCAGCCTTGCACAGCTCATCCACAGGGTAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS CAA 90 bp | GTAAGACAGCCAGGCTACCCTGTGGATGAGCTGTGCAAGGCTGAGTaGGAGCTGGTAAGTGAGGCTGGGAGCACGTGTTACATCAGACAC | + |
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Preference number: 6 (lower is better) Translates to: VRQPGYPVDELCKAE*ELVSEAGSTCYIRH Trigger: GTGTCTGATGTAACACGTGCTCCCAGCCTCACTTACCAGCTCCAACTCAGCCTTGCACAGCTCATCCACAGGGTAGCCTGGCTGTCTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS TCA 72 bp | CGTTCATTCGCATACACACTTTATCCAAAAGGTCGATaGGGAACGCCTCGGACTGGGCCAGGGGAACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: RSFAYTLYPKGR*GTPRTGPGEPF Trigger: AAAAGGTTCCCCTGGCCCAGTCCGAGGCGTTCCTCATCGACCTTTTGGATAAAGTGTGTATGCGAATGAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141601.9 |
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| CDS CAA 90 bp | AGGCTGGGAGCACGTGTTACATCAGACACAGTACCTGATTTTTCATaGCACAGCATATCAGCTAGATGGTTTGCCTCCTGGGCAATAAGT | + |
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Preference number: 6 (lower is better) Translates to: RLGARVTSDTVPDFS*HSISARWFASWAIS Trigger: ACTTATTGCCCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGAAAAATCAGGTACTGTGTCTGATGTAACACGTGCTCCCAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS CAA 90 bp | GGTTCAGGGCTGTTGGTAGGAGTGCCACATAGATCTGATTTTTCATaGCACAGCATATCAGCTAGATGGTTTGCCTCCTGGGCAATAAGT | + |
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Preference number: 6 (lower is better) Translates to: GSGLLVGVPHRSDFS*HSISARWFASWAIS Trigger: ACTTATTGCCCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGAAAAATCAGATCTATGTGGCACTCCTACCAACAGCCCTGAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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| CDS TCA 72 bp | TGTATATTTTGTCTCCCTTCCTCGGAGCATATCTCCTaGAATACTTCTGCTTGGTCACTGGGTCGTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CIFCLPSSEHIS*NTSAWSLGRPP Trigger: TGGAGGACGACCCAGTGACCAAGCAGAAGTATTTCAGGAGATATGCTCCGAGGAAGGGAGACAAAATATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117098.2 ENSMUST00000118882.2 ENSMUST00000120068.2 ENSMUST00000141601.9 |
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| CDS CAA 72 bp | GCACGTGTTACATCAGACACAGTACCTGATTTTTCATaGCACAGCATATCAGCTAGATGGTTTGCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ARVTSDTVPDFS*HSISARWFASW Trigger: CCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGAAAAATCAGGTACTGTGTCTGATGTAACACGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS CCA 72 bp | GTACCTGATTTTTCATTGCACAGCATATCAGCTAGATaGTTTGCCTCCTGGGCAATAAGTTCGAATATCTCA | + |
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Preference number: 6 (lower is better) Translates to: VPDFSLHSISAR*FASWAISSNIS Trigger: TGAGATATTCGAACTTATTGCCCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGAAAAATCAGGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117098.2 ENSMUST00000120068.2 |
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| CDS CCA 72 bp | TCATTGCACAGCATATCAGCTAGATGGTTTGCCTCCTaGGCAATAAGTTCGAATATCTCATCTTCATACTTT | + |
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Preference number: 6 (lower is better) Translates to: SLHSISARWFAS*AISSNISSSYF Trigger: AAAGTATGAAGATGAGATATTCGAACTTATTGCCCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117098.2 ENSMUST00000118882.2 ENSMUST00000120068.2 ENSMUST00000141601.9 |
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| CDS CCA 72 bp | AGATCTGATTTTTCATTGCACAGCATATCAGCTAGATaGTTTGCCTCCTGGGCAATAAGTTCGAATATCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSDFSLHSISAR*FASWAISSNIS Trigger: TGAGATATTCGAACTTATTGCCCAGGAGGCAAACCATCTAGCTGATATGCTGTGCAATGAAAAATCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118882.2 ENSMUST00000141601.9 |
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