Pregenerated sensors for CNPPD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033159Ensembl transcript IDs: ENSMUST00000041213.12, ENSMUST00000168720.8, ENSMUST00000189403.7, ENSMUST00000190679.7
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGGTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCACTGAGCTaGCACTGTCCCAGGCACCACTGGTGTCCTAGCCTGCTAGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: IGGSLSSVACLWSLS*HCPRHHWCPSLLAR Trigger: TCTGGCTAGCAGGCTAGGACACCAGTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGACAGAGAACCACCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR TCA 90 bp | CAGCTCAGAGCAAACGCCTACATAGTGATTACAGGGCTGTGCATCTaGCCTGGGAGGCAGAGGAGGGATAGGAGATCAACAAAGAATGCT | + |
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Preference number: 1 (lower is better) Translates to: QLRANAYIVITGLCI*PGRQRRDRRSTKNA Trigger: AGCATTCTTTGTTGATCTCCTATCCCTCCTCTGCCTCCCAGGTCAGATGCACAGCCCTGTAATCACTATGTAGGCGTTTGCTCTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR GCA 90 bp | TATGGTTTCAGAGCTGACCATCTGATATCGGATGATCAATCAGGATaGTATCTCTGGGGAAGGCAAACCCTCCCACTCGAAGCACTCCTT | + |
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Preference number: 1 (lower is better) Translates to: YGFRADHLISDDQSG*YLWGRQTLPLEALL Trigger: AAGGAGTGCTTCGAGTGGGAGGGTTTGCCTTCCCCAGAGATAGCATCCTGATTGATCATCCGATATCAGATGGTCAGCTCTGAAACCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACATGCCTCTGGTCACTaGGCTGACACTGTCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: TGSFLVLSSSHHGSQPQRHASGH*ADTVPG Trigger: GCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATG...TCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTTAGAGGACCCAGCAATTCTTGGCTGTGACAGGGAGCTTCCTGGTCCTCAGTGTCCCAGGCACCACTaGTGTCCTAGCCTGCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: RLEDPAILGCDRELPGPQCPRHH*CPSLLA Trigger: GGCTAGCAGGCTAGGACACCAGTGGTGCCTGGGACA...CTGAGGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCTCTAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTCTCTGGTCACTGAGCTaGCACTGTCCCAGGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: EENTQKGRVGSLGAGCYGLWSLS*HCPRHH Trigger: GTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAG...ACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGACTCTGGTCACTGAGCTaGCACTGTCCCAGGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: KGRVGSLGAGCYGWKTKGLWSLS*HCPRHH Trigger: GTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAG...TCCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR TCA 90 bp | GTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGCATGCCTCTGGTCACTaGGCTGACACTGTCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VKRTPKKAEWEALEQDATHASGH*ADTVPG Trigger: GCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATG...CGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGATGTCCCAGGCACCACTaGTGTCCTAGCCTGCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: TREACEENTQKGRVGSLGCPRHH*CPSLLA Trigger: GGCTAGCAGGCTAGGACACCAGTGGTGCCTGGGACA...TCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGTGTCCCAGGCACCACTaGTGTCCTAGCCTGCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: VKRTPKKAEWEALEQDATCPRHH*CPSLLA Trigger: GGCTAGCAGGCTAGGACACCAGTGGTGCCTGGGACA...CGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTACCCACCCAGGATATATGACACAGACAGGGCTTTCCCAGGCCTGGGAACAGAGTGGGAAGCCTTaGAGCAGGATGCTACGGTTG | + |
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Preference number: 2 (lower is better) Translates to: AGTHPGYMTQTGLSQAWEQSGKP*SRMLRL Trigger: CAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTG...TTCCCAGGCCTGGGAAAGCCCTGTCTGTGTCATATATCCTGGGTGGGTACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCACTCGAAGCACTCCTTAGGTACCTTTGTGTTGGGTTGAGGCCTCAGGTTTCTACAACGACCCCTTaGGGGCTGCAGCTCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: LPLEALLRYLCVGLRPQVSTTTP*GLQLHQ Trigger: CTGGTGGAGCTGCAGCCCCCAAGGGGTCGTTGTAGA...AACCTGAGGCCTCAACCCAACACAAAGGTACCTAAGGAGTGCTTCGAGTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGCTCTGGTCACTGAGCTaGCACTGTCCCAGGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: KKAEWEALEQDATVGRQRLWSLS*HCPRHH Trigger: GTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAG...CCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR CAA 90 bp | TATATGACACAGACAGGGCTTTCCCAGGCCTGGGAAAGTCACCACTaGTACCCCATGGCAGGTCACATCCAGCAATTTCAGGGCCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: YMTQTGLSQAWESHH*YPMAGHIQQFQGPQ Trigger: TTGGGGGCCCTGAAATTGCTGGATGTGACCTGCCATGGGGTACAAGTGGTGACTTTCCCAGGCCTGGGAAAGCCCTGTCTGTGTCATATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGAAGCAATTCTTGGCTGTaGCAGGGAGCTTCCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: KGRVGSLGAGCYGWKTKGSNSWL*QGASWS Trigger: GGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCT...TCCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR TCA 90 bp | ACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAAGCAATTCTTGGCTGTaGCAGGGAGCTTCCTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TREACEENTQKGRVGSLGSNSWL*QGASWS Trigger: GGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCT...TCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGCAATTTCAGGGCCCCCAAGAAGTAGCAGCAGGGATGCAGGAAAGCTTGAACCAGAGAGGCCTGTaGAGAGAACACCCAAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: IQQFQGPQEVAAGMQESLNQRGL*REHPKR Trigger: CCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTT...CAAGCTTTCCTGCATCCCTGCTGCTACTTCTTGGGGGCCCTGAAATTGCTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCGGCGACAGGTCCACATACACCAAAGATGGTTCTTCCAGTGATGACTCAGGCAGGATGCTACGGTTaGAAGACAAAGGGACAAGGT | + |
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Preference number: 2 (lower is better) Translates to: QPATGPHTPKMVLPVMTQAGCYG*KTKGQG Trigger: ACCTTGTCCCTTTGTCTTCCAACCGTAGCATCCTGC...CTGAGTCATCACTGGAAGAACCATCTTTGGTGTATGTGGACCTGTCGCCGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR GCA 90 bp | TATGACACAGACAGGGCTTTCCCAGGCCTGGGAAAGTCACCACTTGTACCCCATGAGATCAACAAAGAATaGTACAGAAGGAAAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: YDTDRAFPGLGKSPLVPHEINKE*YRRKRP Trigger: TGGCCTTTTCCTTCTGTAGCATTCTTTGTTGATCTC...ATGGGGTACAAGTGGTGACTTTCCCAGGCCTGGGAAAGCCCTGTCTGTGTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR TCA 90 bp | TTATTGAAACCTCAATTCTATAAAAGCGTGAAAAACCCAGATACAAAGCAGTGGAGCAATTCTTGGCTGTaGCAGGGAGCTTCCTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLKPQFYKSVKNPDTKQWSNSWL*QGASWS Trigger: GGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCT...CCACTGCTTTGTATCTGGGTTTTTCACGCTTTTATAGAATTGAGGTTTCAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR TCA 90 bp | TTATTGAAACCTCAATTCTATAAAAGCGTGAAAAACCCAGATACAAAGCAGTGGAACCAGAGAGGCCTGTaGAGAGAACACCCAAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLKPQFYKSVKNPDTKQWNQRGL*REHPKR Trigger: CCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTT...CCACTGCTTTGTATCTGGGTTTTTCACGCTTTTATAGAATTGAGGTTTCAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGGAAGGCAAACCCTCCCACTCGAAGCACTCCTTAGGTACCTTTGTGTTGGGTTCTACAACGACCCCTaGGGGGCTGCAGCTCCACCA | + |
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Preference number: 3 (lower is better) Translates to: WGRQTLPLEALLRYLCVGFYNDP*GAAAPP Trigger: TGGTGGAGCTGCAGCCCCCAAGGGGTCGTTGTAGAA...CCCAACACAAAGGTACCTAAGGAGTGCTTCGAGTGGGAGGGTTTGCCTTCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR TCA 72 bp | TCTCTGTCATCTGTGGCATGCCTCTGGTCACTGAGCTaGCACTGTCCCAGGCACCACTGGTGTCCTAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: SLSSVACLWSLS*HCPRHHWCPSL Trigger: CAGGCTAGGACACCAGTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGACAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR TCA 72 bp | GTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCACTaGGCTGACACTGTCCCAGGCACCACTGGTGTCCTA | + |
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Preference number: 3 (lower is better) Translates to: VVLCHLWHASGH*ADTVPGTTGVL Trigger: TAGGACACCAGTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGACAGAGAACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR TCA 72 bp | CACAGACCTTTATTCCCAGCCCCCACACTCCCTAGGTaGTCTTTAGCAGCCGGCGACAGGTCCACATACACC | + |
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Preference number: 3 (lower is better) Translates to: HRPLFPAPTLPR*SLAAGDRSTYT Trigger: GGTGTATGTGGACCTGTCGCCGGCTGCTAAAGATCACCTAGGGAGTGTGGGGGCTGGGAATAAAGGTCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGGAAGGCAAACCCTCCCACTCGAAGCACTCCTTAGGTACCTTTGTGTTGGGAGGACCCAGCAATTCTaGGCTGTGACAGGGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: WGRQTLPLEALLRYLCVGRTQQF*AVTGSF Trigger: GAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCT...CCCAACACAAAGGTACCTAAGGAGTGCTTCGAGTGGGAGGGTTTGCCTTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTACCCACCCAGGATATATGACACAGACAGGGCTTTCCCAGGCCTGGGAAAGCAGGATGCTACGGTaGGAAGACAAAGGGACAAGG | + |
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Preference number: 3 (lower is better) Translates to: AGTHPGYMTQTGLSQAWESRMLR*EDKGTR Trigger: CCTTGTCCCTTTGTCTTCCAACCGTAGCATCCTGCT...TTCCCAGGCCTGGGAAAGCCCTGTCTGTGTCATATATCCTGGGTGGGTACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR TCA 72 bp | AGGGACAAGGTTAGAGGACCCAGCAATTCTTGGCTGTaGCAGGGAGCTTCCTGGTCCTCAGCAGCTCTCATC | + |
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Preference number: 3 (lower is better) Translates to: RDKVRGPSNSWL*QGASWSSAALI Trigger: GATGAGAGCTGCTGAGGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCTCTAACCTTGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR CCA 72 bp | GACAGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATaGTTCTCAGCCTCAGAGACATCACAGAGACCCACA | + |
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Preference number: 3 (lower is better) Translates to: DRELPGPQQLSS*FSASETSQRPT Trigger: TGTGGGTCTCTGTGATGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR CCA 72 bp | CCAGGATATATGACACAGACAGGGCTTTCCCAGGCCTaGGAAAGTCACCACTTGTACCCCATGGCAGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: PGYMTQTGLSQA*ESHHLYPMAGH Trigger: GTGACCTGCCATGGGGTACAAGTGGTGACTTTCCCAGGCCTGGGAAAGCCCTGTCTGTGTCATATATCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR GCA 72 bp | AAGGTCAGTACATTTCTACAACGACCCCTTGGGGGCTaGAGCTCCACCAGTCCACAGACCTTTATTCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: KVSTFLQRPLGG*SSTSPQTFIPS Trigger: GCTGGGAATAAAGGTCTGTGGACTGGTGGAGCTGCAGCCCCCAAGGGGTCGTTGTAGAAATGTACTGACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR CCA 72 bp | TCTACTTCCCTAGGCGTGTGGAGGCAGAGAGATAGGTaGTTCTCTGTCATCTGTGGCATGCCTCTGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: STSLGVWRQRDR*FSVICGMPLVT Trigger: AGTGACCAGAGGCATGCCACAGATGACAGAGAACCACCTATCTCTCTGCCTCCACACGCCTAGGGAAGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR TCA 72 bp | GCAAACGCCTACATAGTGATTACAGGGCTGTGCATCTaGCCTGGGAGGCAGAGGAGGGATAGGAGATCAACA | + |
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Preference number: 3 (lower is better) Translates to: ANAYIVITGLCI*PGRQRRDRRST Trigger: TGTTGATCTCCTATCCCTCCTCTGCCTCCCAGGTCAGATGCACAGCCCTGTAATCACTATGTAGGCGTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR TCA 72 bp | CAGAGCTTGGATTCCAGCTCAACTGGATGTGTGGTTTaGACCATAAGGATCCACAAGGCTGGTACCCACCCA | + |
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Preference number: 3 (lower is better) Translates to: QSLDSSSTGCVV*TIRIHKAGTHP Trigger: TGGGTGGGTACCAGCCTTGTGGATCCTTATGGTTCAAACCACACATCCAGTTGAGCTGGAATCCAAGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR GCA 72 bp | AGAGCTGACCATCTGATATCGGATGATCAATCAGGATaGTATCTCTGGGGAAGGCAAACCCTCCCACTCGAA | + |
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Preference number: 3 (lower is better) Translates to: RADHLISDDQSG*YLWGRQTLPLE Trigger: TTCGAGTGGGAGGGTTTGCCTTCCCCAGAGATAGCATCCTGATTGATCATCCGATATCAGATGGTCAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR GCA 72 bp | CTCCCTTCCCTTCCCTCCCTCAAAAACCCTCCCGTATaGCCCTCCATCTCATTTTTCAAACTCATTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LPSLPSLKNPPV*PSISFFKLIAF Trigger: AAAGGCAATGAGTTTGAAAAATGAGATGGAGGGGCATACGGGAGGGTTTTTGAGGGAGGGAAGGGAAGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR CCA 72 bp | ACACCAAAGATGGTTCTTCCAGTGATGACTCAGCTCTaGTTCTTCAGCACCAGCTCCTTCCGTAAGTCACCT | + |
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Preference number: 3 (lower is better) Translates to: TPKMVLPVMTQL*FFSTSSFRKSP Trigger: AGGTGACTTACGGAAGGAGCTGGTGCTGAAGAACCAGAGCTGAGTCATCACTGGAAGAACCATCTTTGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR CCA 72 bp | CTGAAGAGGTCAACAGAGCTTGGATTCCAGCTCAACTaGATGTGTGGTTTGAACCATAAGGATCCACAAGGC | + |
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Preference number: 3 (lower is better) Translates to: LKRSTELGFQLN*MCGLNHKDPQG Trigger: GCCTTGTGGATCCTTATGGTTCAAACCACACATCCAGTTGAGCTGGAATCCAAGCTCTGTTGACCTCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR CCA 72 bp | TCCGTAAGTCACCTTGCTGAAGAGGTCAACAGAGCTTaGATTCCAGCTCAACTGGATGTGTGGTTTGAACCA | + |
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Preference number: 3 (lower is better) Translates to: SVSHLAEEVNRA*IPAQLDVWFEP Trigger: TGGTTCAAACCACACATCCAGTTGAGCTGGAATCCAAGCTCTGTTGACCTCTTCAGCAAGGTGACTTACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR GCA 72 bp | AATATAACATTAGGATTGGGTAGGGTTGGTGGCACATaGCTGTATCCTGCCGTTCTGAAGGCAGATGTAACC | + |
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Preference number: 3 (lower is better) Translates to: NITLGLGRVGGT*LYPAVLKADVT Trigger: GGTTACATCTGCCTTCAGAACGGCAGGATACAGGCATGTGCCACCAACCCTACCCAATCCTAATGTTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| 3UTR-3UTR CAA 90 bp | TTATTGAAACCTCAATTCTATAAAAGCGTGAAAAACCCAGATACAAAGCAGTGGAGCAGGATGCTACGGTaGGAAGACAAAGGGACAAGG | + |
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Preference number: 3 (lower is better) Translates to: LLKPQFYKSVKNPDTKQWSRMLR*EDKGTR Trigger: CCTTGTCCCTTTGTCTTCCAACCGTAGCATCCTGCT...CCACTGCTTTGTATCTGGGTTTTTCACGCTTTTATAGAATTGAGGTTTCAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | AGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACAGCTCCAGAGCCAGGGTaGGGCCAGGCCGCGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: RELPGPQQLSSWFSASETAPEPG*GQAAGM Trigger: CATGCCCGCGGCCTGGCCCCACCCTGGCTCTGGAGC...TGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | GTGGTAACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCGCTCCAGAGCCAGGGTaGGGCCAGGCCGCGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: VVTREACEENTQKGRVGSAPEPG*GQAAGM Trigger: CATGCCCGCGGCCTGGCCCCACCCTGGCTCTGGAGC...GCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTTACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | ACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCTCCAGAGCCAGGGTaGGGCCAGGCCGCGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: TREACEENTQKGRVGSLGAPEPG*GQAAGM Trigger: CATGCCCGCGGCCTGGCCCCACCCTGGCTCTGGAGC...TCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | AACGACCCCTTGGGGGCTGCAGCTCCACCAGTCCACAGACCTTTATTCCCAGCCCTGGGGCTGGAGAAATaGAGGGGCCACTGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NDPLGAAAPPVHRPLFPALGLEK*RGHWAP Trigger: TGGAGCCCAGTGGCCCCTCCATTTCTCCAGCCCCAG...GGCTGGGAATAAAGGTCTGTGGACTGGTGGAGCTGCAGCCCCCAAGGGGTCGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR GCA 90 bp | AAGGTCAGTACATTTCTACAACGACCCCTTGGGGGCTGCAGCTCCACCAGTCCACCCCGCCGCCGTCCTTaGTGCTCAGCCACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVSTFLQRPLGGCSSTSPPRRRP*CSATQL Trigger: GAGCTGTGTGGCTGAGCAGCAAGGACGGCGGCGGGG...TGGACTGGTGGAGCTGCAGCCCCCAAGGGGTCGTTGTAGAAATGTACTGACCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
||
| CDS-3UTR TCA 90 bp | GTCATCTGTGGCATGCCTCTGGTCACTGAGCTGACACTGTCCCAGGCACCACTGTCCTTTCCAAGGCATTaGGGGTGGCCACGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: VICGMPLVTELTLSQAPLSFPRH*GWPRRL Trigger: GAGTCGCCGTGGCCACCCTCAATGCCTTGGAAAGGA...CAGTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | AAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGCCCCGCCGCCGTCCTTaGTGCTCAGCCACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRQSGKPWSRMLRLEDKGPRRRP*CSATQL Trigger: GAGCTGTGTGGCTGAGCAGCAAGGACGGCGGCGGGG...CCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR GCA 90 bp | TTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACATCACAGACCCCGCCGCCGTCCTTaGTGCTCAGCCACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLVLSSSHHGSQPQRHHRPRRRP*CSATQL Trigger: GAGCTGTGTGGCTGAGCAGCAAGGACGGCGGCGGGG...TCTGTGATGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR TCA 90 bp | GTCATCTGTGGCATGCCTCTGGTCACTGAGCTGACACTGTCCCAGGCACCACTGTCTTGGAGACCAGTGTaGGTTCAGGAGGACCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VICGMPLVTELTLSQAPLSWRPV*VQEDLV Trigger: CACCAGGTCCTCCTGAACTCACACTGGTCTCCAAGA...CAGTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | AGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACAGGCGACTCCCCCAGCTaGCCCCCATTCGTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RELPGPQQLSSWFSASETGDSPS*PPFVIE Trigger: TTCAATGACGAATGGGGGGCAGCTGGGGGAGTCGCC...TGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | AAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGATGTCTGCCACAGGGCTaGAGAGCTCCTCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGRVGSLGAGCYGWKTKGCLPQG*RAPPGC Trigger: GCAGCCTGGAGGAGCTCTCCAGCCCTGTGGCAGACA...TCCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGGCAGAGAGATAGGTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCATGTCTGCCACAGGGCTaGAGAGCTCCTCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGGREIGGSLSSVACLWSCLPQG*RAPPGC Trigger: GCAGCCTGGAGGAGCTCTCCAGCCCTGTGGCAGACA...TGACCAGAGGCATGCCACAGATGACAGAGAACCACCTATCTCTCTGCCTCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | TGTGGAGGCAGAGAGATAGGTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCAAGCTTTACCAGCCGCTaGCAGAGGGAGCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGGREIGGSLSSVACLWSSFTSR*QREPRA Trigger: GGCTCTGGGCTCCCTCTGCCAGCGGCTGGTAAAGCT...TGACCAGAGGCATGCCACAGATGACAGAGAACCACCTATCTCTCTGCCTCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | ATCCAGCAATTTCAGGGCCCCCAAGAAGTAGCAGCAGGGATGCAGGAAAGCTTGAAATGGAGGGGCCACTaGGCTCCAGAGCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQQFQGPQEVAAGMQESLKWRGH*APEPGW Trigger: CCACCCTGGCTCTGGAGCCCAGTGGCCCCTCCATTT...CAAGCTTTCCTGCATCCCTGCTGCTACTTCTTGGGGGCCCTGAAATTGCTGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTAACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCAAATGGAGGGGCCACTaGGCTCCAGAGCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVTREACEENTQKGRVGSKWRGH*APEPGW Trigger: CCACCCTGGCTCTGGAGCCCAGTGGCCCCTCCATTT...GCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTTACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR CCA 90 bp | GTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACATCACAGAGACCCACTGGGGCTGGAGAAATaGAGGGGCCACTGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLSSSHHGSQPQRHHRDPLGLEK*RGHWAP Trigger: TGGAGCCCAGTGGCCCCTCCATTTCTCCAGCCCCAG...TGGGTCTCTGTGATGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | GTGGTAACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTGGGGCTGGAGAAATaGAGGGGCCACTGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVTREACEENTQKGRVGSLGLEK*RGHWAP Trigger: TGGAGCCCAGTGGCCCCTCCATTTCTCCAGCCCCAG...GCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTTACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR TCA 90 bp | GTGGTAACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCTCCTTTCCAAGGCATTaGGGGTGGCCACGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: VVTREACEENTQKGRVGSSFPRH*GWPRRL Trigger: GAGTCGCCGTGGCCACCCTCAATGCCTTGGAAAGGA...GCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTTACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | AAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGGGCGACTCCCCCAGCTaGCCCCCATTCGTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRQSGKPWSRMLRLEDKGGDSPS*PPFVIE Trigger: TTCAATGACGAATGGGGGGCAGCTGGGGGAGTCGCC...CCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGAGGCGACTCCCCCAGCTaGCCCCCATTCGTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGRVGSLGAGCYGWKTKGGDSPS*PPFVIE Trigger: TTCAATGACGAATGGGGGGCAGCTGGGGGAGTCGCC...TCCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | GTGGTAACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCAGCTGCCACGTTGGCTaGTCCAGCAGCACACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVTREACEENTQKGRVGSSCHVG*SSSTHR Trigger: CCTGTGTGTGCTGCTGGAGCAGCCAACGTGGCAGCT...GCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTTACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGAAGCTGCCACGTTGGCTaGTCCAGCAGCACACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGRVGSLGAGCYGWKTKGSCHVG*SSSTHR Trigger: CCTGTGTGTGCTGCTGGAGCAGCCAACGTGGCAGCT...TCCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | AACTGGATGTGTGGTTTGAACCATAAGGATCCACAAGGCTGGTACCCACCCAGGAGCTTTACCAGCCGCTaGCAGAGGGAGCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NWMCGLNHKDPQGWYPPRSFTSR*QREPRA Trigger: GGCTCTGGGCTCCCTCTGCCAGCGGCTGGTAAAGCT...CCTGGGTGGGTACCAGCCTTGTGGATCCTTATGGTTCAAACCACACATCCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGAGCTTTACCAGCCGCTaGCAGAGGGAGCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KKAEWEALEQDATVGRQRSFTSR*QREPRA Trigger: GGCTCTGGGCTCCCTCTGCCAGCGGCTGGTAAAGCT...CCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | GTCATCTGTGGCATGCCTCTGGTCACTGAGCTGACACTGTCCCAGGCACCACTGCAAAGGGGACATTTGTaGAGAGGAGTAGGAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VICGMPLVTELTLSQAPLQRGHL*RGVGGA Trigger: TGCCCCTCCTACTCCTCTCCACAAATGTCCCCTTTG...CAGTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | TTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACATCACAGAAAATGGAGGGGCCACTaGGCTCCAGAGCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLVLSSSHHGSQPQRHHRKWRGH*APEPGW Trigger: CCACCCTGGCTCTGGAGCCCAGTGGCCCCTCCATTT...TCTGTGATGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR TCA 90 bp | AGGTTAGAGGACCCAGCAATTCTTGGCTGTGACAGGGAGCTTCCTGGTCCTCAGAGTCTTGGAAACCGGTaGGGGAGAAGGCGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLEDPAILGCDRELPGPQSLGNR*GRRRLL Trigger: AAGAAGGCGCCTTCTCCCTCACCGGTTTCCAAGACT...CTGAGGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCTCTAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR TCA 90 bp | TGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACTCCTTTCCAAGGCATTaGGGGTGGCCACGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CEENTQKGRVGSLGAGCYSFPRH*GWPRRL Trigger: GAGTCGCCGTGGCCACCCTCAATGCCTTGGAAAGGA...GTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | TGTGACAGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCACAGCTAGGGCCACGCTaGTCACATATGCCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CDRELPGPQQLSSWFSASQLGPR*SHMPQL Trigger: TAGCTGTGGCATATGTGAGCAGCGTGGCCCTAGCTG...TGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCTGTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | GAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTGTGCTGCAGATAATCTaGGTTTCGGTGCCGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EENTQKGRVGSLGAGCYGVLQII*VSVPEP Trigger: CGGCTCCGGCACCGAAACCCAGATTATCTGCAGCAC...ACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | GTGGTAACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCGTGCTGCAGATAATCTaGGTTTCGGTGCCGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VVTREACEENTQKGRVGSVLQII*VSVPEP Trigger: CGGCTCCGGCACCGAAACCCAGATTATCTGCAGCAC...GCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTTACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR CAA 72 bp | AGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTaGGAAGACAAAGGGACAAGGTTAGAGGACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQSGKPWSRMLR*EDKGTRLEDPA Trigger: TGCTGGGTCCTCTAACCTTGTCCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR CAA 72 bp | CAGACAGGGCTTTCCCAGGCCTGGGAAAGTCACCACTaGTACCCCATGGCAGGTCACATCCAGCAATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTGLSQAWESHH*YPMAGHIQQFQ Trigger: CTGAAATTGCTGGATGTGACCTGCCATGGGGTACAAGTGGTGACTTTCCCAGGCCTGGGAAAGCCCTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR TCA 90 bp | CTCCCACTCGAAGCACTCCTTAGGTACCTTTGTGTTGGGTTGAGGCCTCAGGTTAGTCTTGGAAACCGGTaGGGGAGAAGGCGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLEALLRYLCVGLRPQVSLGNR*GRRRLL Trigger: AAGAAGGCGCCTTCTCCCTCACCGGTTTCCAAGACT...AACCTGAGGCCTCAACCCAACACAAAGGTACCTAAGGAGTGCTTCGAGTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGATCTTGGAGACCAGTGTaGGTTCAGGAGGACCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGRVGSLGAGCYGWKTKGSWRPV*VQEDLV Trigger: CACCAGGTCCTCCTGAACTCACACTGGTCTCCAAGA...TCCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR TCA 90 bp | CAGCCGGCGACAGGTCCACATACACCAAAGATGGTTCTTCCAGTGATGACTCAGTCTTGGAGACCAGTGTaGGTTCAGGAGGACCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QPATGPHTPKMVLPVMTQSWRPV*VQEDLV Trigger: CACCAGGTCCTCCTGAACTCACACTGGTCTCCAAGA...CTGAGTCATCACTGGAAGAACCATCTTTGGTGTATGTGGACCTGTCGCCGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR GCA 90 bp | CAGAGACATCACAGAGACCCACATCAATCCTCTCCTCCGCTTCCCACACTCCCATTCCACAGTAATGTCTaGCACAGGGCTGGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRHHRDPHQSSPPLPTLPFHSNV*HRAGEL Trigger: GAGCTCTCCAGCCCTGTGGCAGACATTACTGTGGAA...TGGGAGTGTGGGAAGCGGAGGAGAGGATTGATGTGGGTCTCTGTGATGTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | AGGTTAGAGGACCCAGCAATTCTTGGCTGTGACAGGGAGCTTCCTGGTCCTCAGTTCCACAGTAATGTCTaGCACAGGGCTGGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLEDPAILGCDRELPGPQFHSNV*HRAGEL Trigger: GAGCTCTCCAGCCCTGTGGCAGACATTACTGTGGAA...CTGAGGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCTCTAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | GTCATCTGTGGCATGCCTCTGGTCACTGAGCTGACACTGTCCCAGGCACCACTGAATAGGACTGGGTGCTaGCTTCTGAAGAAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VICGMPLVTELTLSQAPLNRTGC*LLKKFH Trigger: GTGGAACTTCTTCAGAAGGCAGCACCCAGTCCTATT...CAGTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACATCACAGAGACCCACATCAAAGCTGCCACGTTGGCTaGTCCAGCAGCACACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSHHGSQPQRHHRDPHQSCHVG*SSSTHR Trigger: CCTGTGTGTGCTGCTGGAGCAGCCAACGTGGCAGCT...TTGATGTGGGTCTCTGTGATGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGACAGCTAGGGCCACGCTaGTCACATATGCCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KGRVGSLGAGCYGWKTKGQLGPR*SHMPQL Trigger: TAGCTGTGGCATATGTGAGCAGCGTGGCCCTAGCTG...TCCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGGCAGAGAGATAGGTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCACAGCTAGGGCCACGCTaGTCACATATGCCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CGGREIGGSLSSVACLWSQLGPR*SHMPQL Trigger: TAGCTGTGGCATATGTGAGCAGCGTGGCCCTAGCTG...TGACCAGAGGCATGCCACAGATGACAGAGAACCACCTATCTCTCTGCCTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACAATGGCAAGTCTACACTaGCTTCCAGGCAGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RELPGPQQLSSWFSASETMASLH*LPGSWR Trigger: TCTCCAGCTGCCTGGAAGGCAGTGTAGACTTGCCAT...TGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR GCA 90 bp | CAGCCGGCGACAGGTCCACATACACCAAAGATGGTTCTTCCAGTGATGACTCAGATGGGGCCAGAAGACTaGCCCAGAGTGATGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPATGPHTPKMVLPVMTQMGPED*PRVMAS Trigger: ACTTGCCATCACTCTGGGGCAGTCTTCTGGCCCCAT...CTGAGTCATCACTGGAAGAACCATCTTTGGTGTATGTGGACCTGTCGCCGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGGCAGAGAGATAGGTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCAATGGGGCCAGAAGACTaGCCCAGAGTGATGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGGREIGGSLSSVACLWSMGPED*PRVMAS Trigger: ACTTGCCATCACTCTGGGGCAGTCTTCTGGCCCCAT...TGACCAGAGGCATGCCACAGATGACAGAGAACCACCTATCTCTCTGCCTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACAAAGGGGACATTTGTaGAGAGGAGTAGGAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGSFLVLSSSHHGSQPQRQRGHL*RGVGGA Trigger: TGCCCCTCCTACTCCTCTCCACAAATGTCCCCTTTG...TCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
||
| CDS-3UTR CCA 90 bp | TGTGACAGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAAAAAGCGAACACTGCTaGGGCTGGAGAAATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDRELPGPQQLSSWFSASKSEHC*GWRNGG Trigger: CCCTCCATTTCTCCAGCCCCAGCAGTGTTCGCTTTT...TGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCTGTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR TCA 90 bp | CAGAGACATCACAGAGACCCACATCAATCCTCTCCTCCGCTTCCCACACTCCCACTGGGTGCTGCCTTCTaGAGAAGTTCCACAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: QRHHRDPHQSSPPLPTLPLGAAF*RSSTVM Trigger: CATTACTGTGGAACTTCTTCAGAAGGCAGCACCCAG...TGGGAGTGTGGGAAGCGGAGGAGAGGATTGATGTGGGTCTCTGTGATGTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR TCA 90 bp | TGTGACAGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCACTGGGTGCTGCCTTCTaGAGAAGTTCCACAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: CDRELPGPQQLSSWFSASLGAAF*RSSTVM Trigger: CATTACTGTGGAACTTCTTCAGAAGGCAGCACCCAG...TGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCTGTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR TCA 90 bp | AGGTTAGAGGACCCAGCAATTCTTGGCTGTGACAGGGAGCTTCCTGGTCCTCAGCTGGGTGCTGCCTTCTaGAGAAGTTCCACAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: RLEDPAILGCDRELPGPQLGAAF*RSSTVM Trigger: CATTACTGTGGAACTTCTTCAGAAGGCAGCACCCAG...CTGAGGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCTCTAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | TATGACACAGACAGGGCTTTCCCAGGCCTGGGAAAGTCACCACTTGTACCCCATTTCCACAGTAATGTCTaGCACAGGGCTGGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YDTDRAFPGLGKSPLVPHFHSNV*HRAGEL Trigger: GAGCTCTCCAGCCCTGTGGCAGACATTACTGTGGAA...ATGGGGTACAAGTGGTGACTTTCCCAGGCCTGGGAAAGCCCTGTCTGTGTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR GCA 90 bp | TGTGGAGGCAGAGAGATAGGTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCAATGGCAAGTCTACACTaGCTTCCAGGCAGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGGREIGGSLSSVACLWSMASLH*LPGSWR Trigger: TCTCCAGCTGCCTGGAAGGCAGTGTAGACTTGCCAT...TGACCAGAGGCATGCCACAGATGACAGAGAACCACCTATCTCTCTGCCTCCACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | AAAGGGACAAGGTTAGAGGACCCAGCAATTCTTGGCTGTGACAGGGAGCTTCCTATGGGGCCAGAAGACTaGCCCAGAGTGATGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGTRLEDPAILGCDRELPMGPED*PRVMAS Trigger: ACTTGCCATCACTCTGGGGCAGTCTTCTGGCCCCAT...AGGAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCTCTAACCTTGTCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | GATAGGTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCACTGAGCTGACACTGAAAAGCGAACACTGCTaGGGCTGGAGAAATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DRWFSVICGMPLVTELTLKSEHC*GWRNGG Trigger: CCCTCCATTTCTCCAGCCCCAGCAGTGTTCGCTTTT...CAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGACAGAGAACCACCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | CTCCCACTCGAAGCACTCCTTAGGTACCTTTGTGTTGGGTTGAGGCCTCAGGTTAAAAGCGAACACTGCTaGGGCTGGAGAAATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLEALLRYLCVGLRPQVKSEHC*GWRNGG Trigger: CCCTCCATTTCTCCAGCCCCAGCAGTGTTCGCTTTT...AACCTGAGGCCTCAACCCAACACAAAGGTACCTAAGGAGTGCTTCGAGTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR TCA 90 bp | AGGTTAGAGGACCCAGCAATTCTTGGCTGTGACAGGGAGCTTCCTGGTCCTCAGATGACAGACTTGAGATaGGCCAGCTCCATGACACTA | + |
|
Preference number: 4 (lower is better) Translates to: RLEDPAILGCDRELPGPQMTDLR*ASSMTL Trigger: TAGTGTCATGGAGCTGGCTCATCTCAAGTCTGTCAT...CTGAGGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCTCTAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | AACTGGATGTGTGGTTTGAACCATAAGGATCCACAAGGCTGGTACCCACCCAGGATGGCAAGTCTACACTaGCTTCCAGGCAGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NWMCGLNHKDPQGWYPPRMASLH*LPGSWR Trigger: TCTCCAGCTGCCTGGAAGGCAGTGTAGACTTGCCAT...CCTGGGTGGGTACCAGCCTTGTGGATCCTTATGGTTCAAACCACACATCCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACAGACAGCCCCAAAGACTaGTGTATTACAGCCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RELPGPQQLSSWFSASETDSPKD*CITATD Trigger: ATCAGTGGCTGTAATACACCAGTCTTTGGGGCTGTC...TGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGCTTCCTGGTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGAAGTCTCTGGAACTTCTaGCAAAGGGGACATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGSFLVLSSSHHGSQPQRSLWNF*QRGHLW Trigger: CCACAAATGTCCCCTTTGCCAGAAGTTCCAGAGACT...TCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGACCAGGAAGCTCCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR TCA 90 bp | GAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAATGACAGACTTGAGATaGGCCAGCTCCATGACACTA | + |
|
Preference number: 4 (lower is better) Translates to: EHPKRQSGKPWSRMLRLEMTDLR*ASSMTL Trigger: TAGTGTCATGGAGCTGGCTCATCTCAAGTCTGTCAT...TTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR TCA 90 bp | GTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGATGACAGACTTGAGATaGGCCAGCTCCATGACACTA | + |
|
Preference number: 4 (lower is better) Translates to: VKRTPKKAEWEALEQDATMTDLR*ASSMTL Trigger: TAGTGTCATGGAGCTGGCTCATCTCAAGTCTGTCAT...CGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | GATAGGTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCACTGAGCTGACACTGGACAGCCCCAAAGACTaGTGTATTACAGCCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DRWFSVICGMPLVTELTLDSPKD*CITATD Trigger: ATCAGTGGCTGTAATACACCAGTCTTTGGGGCTGTC...CAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGACAGAGAACCACCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | TGTGGAGGCAGAGAGATAGGTGGTTCTCTGTCATCTGTGGCATGCCTCTGGTCAAGTCTCTGGAACTTCTaGCAAAGGGGACATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGGREIGGSLSSVACLWSSLWNF*QRGHLW Trigger: CCACAAATGTCCCCTTTGCCAGAAGTTCCAGAGACT...TGACCAGAGGCATGCCACAGATGACAGAGAACCACCTATCTCTCTGCCTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | GTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGAGTCTCTGGAACTTCTaGCAAAGGGGACATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKRTPKKAEWEALEQDATSLWNF*QRGHLW Trigger: CCACAAATGTCCCCTTTGCCAGAAGTTCCAGAGACT...CGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| 3UTR CAA 72 bp | ACAGAGCTTGGATTCCAGCTCAACTGGATGTGTGGTTaGAACCATAAGGATCCACAAGGCTGGTACCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TELGFQLNWMCG*NHKDPQGWYPP Trigger: GGGTGGGTACCAGCCTTGTGGATCCTTATGGTTCAAACCACACATCCAGTTGAGCTGGAATCCAAGCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR CCA 90 bp | CAGAGACATCACAGAGACCCACATCAATCCTCTCCTCCGCTTCCCACACTCCCATACTGGCCACCATCATaGAGATCAGAAACAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRHHRDPHQSSPPLPTLPYWPPS*RSETNQ Trigger: CTGATTTGTTTCTGATCTCCATGATGGTGGCCAGTA...TGGGAGTGTGGGAAGCGGAGGAGAGGATTGATGTGGGTCTCTGTGATGTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | ACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGATACTGGCCACCATCATaGAGATCAGAAACAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TREACEENTQKGRVGSLGYWPPS*RSETNQ Trigger: CTGATTTGTTTCTGATCTCCATGATGGTGGCCAGTA...TCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACATCACAGAGACCCACATAAAGGTATTTACTaGCCACCATCATGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VLSSSHHGSQPQRHHRDPHKGIY*PPSWRS Trigger: TGATCTCCATGATGGTGGCCAGTAAATACCTTTATG...TGGGTCTCTGTGATGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCTGAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | TTATTGAAACCTCAATTCTATAAAAGCGTGAAAAACCCAGATACAAAGCAGTGGTGTCTGCCACAGGGCTaGAGAGCTCCTCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKPQFYKSVKNPDTKQWCLPQG*RAPPGC Trigger: GCAGCCTGGAGGAGCTCTCCAGCCCTGTGGCAGACA...CCACTGCTTTGTATCTGGGTTTTTCACGCTTTTATAGAATTGAGGTTTCAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR GCA 90 bp | GCTACAGAAGGAAAAGGCCAGGCCATGCAACAGAAACTGTTTATTGAAACCTCAAATAGGACTGGGTGCTaGCTTCTGAAGAAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATEGKGQAMQQKLFIETSNRTGC*LLKKFH Trigger: GTGGAACTTCTTCAGAAGGCAGCACCCAGTCCTATT...TGAGGTTTCAATAAACAGTTTCTGTTGCATGGCCTGGCCTTTTCCTTCTGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCTCTCATCATGGTTCTCAGCCTCAGAGACATCACAGAGACCCACATCAACATAAAGGTATTTACTaGCCACCATCATGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSHHGSQPQRHHRDPHQHKGIY*PPSWRS Trigger: TGATCTCCATGATGGTGGCCAGTAAATACCTTTATG...TTGATGTGGGTCTCTGTGATGTCTCTGAGGCTGAGAACCATGATGAGAGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CCA 90 bp | AAGCCAGGAGAAACCTCAAAGGTTATGACAAAAGGTCAGTACATTTCTACAACGCAAAGGGGACATTTGTaGAGAGGAGTAGGAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPGETSKVMTKGQYISTTQRGHL*RGVGGA Trigger: TGCCCCTCCTACTCCTCTCCACAAATGTCCCCTTTG...CGTTGTAGAAATGTACTGACCTTTTGTCATAACCTTTGAGGTTTCTCCTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR CCA 90 bp | GCTACAGAAGGAAAAGGCCAGGCCATGCAACAGAAACTGTTTATTGAAACCTCACATAAAGGTATTTACTaGCCACCATCATGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ATEGKGQAMQQKLFIETSHKGIY*PPSWRS Trigger: TGATCTCCATGATGGTGGCCAGTAAATACCTTTATG...TGAGGTTTCAATAAACAGTTTCTGTTGCATGGCCTGGCCTTTTCCTTCTGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR CCA 90 bp | AAGCCAGGAGAAACCTCAAAGGTTATGACAAAAGGTCAGTACATTTCTACAACGTACTGGCCACCATCATaGAGATCAGAAACAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPGETSKVMTKGQYISTTYWPPS*RSETNQ Trigger: CTGATTTGTTTCTGATCTCCATGATGGTGGCCAGTA...CGTTGTAGAAATGTACTGACCTTTTGTCATAACCTTTGAGGTTTCTCCTGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR CCA 90 bp | TTATTGAAACCTCAATTCTATAAAAGCGTGAAAAACCCAGATACAAAGCAGTGGGACAGCCCCAAAGACTaGTGTATTACAGCCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKPQFYKSVKNPDTKQWDSPKD*CITATD Trigger: ATCAGTGGCTGTAATACACCAGTCTTTGGGGCTGTC...CCACTGCTTTGTATCTGGGTTTTTCACGCTTTTATAGAATTGAGGTTTCAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | GTCATCTGTGGCATGCCTCTGGTCACTGAGCTGACACTGTCCCAGGCACCACTGGCCCCGCCGCCGTCCTaGCTGCTCAGCCACACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VICGMPLVTELTLSQAPLAPPPS*LLSHTA Trigger: AGCTGTGTGGCTGAGCAGCAAGGACGGCGGCGGGGC...CAGTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS CCA 90 bp | CTTTACCAGCCGCTGGCAGAGGGAGCCCAGAGCCAGCTGCCACGTTaGCTGCTCCAGCAGCACACACAGGTCTGTGTAGGTGTACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LYQPLAEGAQSQLPR*LLQQHTQVCVGVPA Trigger: GGCTGGTACACCTACACAGACCTGTGTGTGCTGCTGGAGCAGCCAACGTGGCAGCTGGCTCTGGGCTCCCTCTGCCAGCGGCTGGTAAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | GTGGTAACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCGCCCCGCCGCCGTCCTaGCTGCTCAGCCACACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVTREACEENTQKGRVGSAPPPS*LLSHTA Trigger: AGCTGTGTGGCTGAGCAGCAAGGACGGCGGCGGGGC...GCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTTACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | AGGTTAGAGGACCCAGCAATTCTTGGCTGTGACAGGGAGCTTCCTGGTCCTCAGGAGCCAGCTGCCACGTaGGCTGCTCCAGCAGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: RLEDPAILGCDRELPGPQEPAAT*AAPAAH Trigger: GTGTGCTGCTGGAGCAGCCAACGTGGCAGCTGGCTC...CTGAGGACCAGGAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCTCTAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | GAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCCTTGGAGCAGGAGAGCCAGCTGCCACGTaGGCTGCTCCAGCAGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: EACEENTQKGRVGSLGAGEPAAT*AAPAAH Trigger: GTGTGCTGCTGGAGCAGCCAACGTGGCAGCTGGCTC...TCCTGCTCCAAGGCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS TCA 90 bp | CTGCACGAGGCTCTTGGAGACCAGTGTGAGTTCAGGAGGACCTGGTaGGGGGCTGGAGGACAGCCCCAAAGACTGGTGTATTACAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHEALGDQCEFRRTW*GAGGQPQRLVYYSH Trigger: GTGGCTGTAATACACCAGTCTTTGGGGCTGTCCTCCAGCCCCTCACCAGGTCCTCCTGAACTCACACTGGTCTCCAAGAGCCTCGTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS GCA 90 bp | GAGACATTAGTCAGGCACTGTGACACAGGGGCAGGTACGCAGGGCTaGACGAGGCTCTTGGAGACCAGTGTGAGTTCAGGAGGACCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ETLVRHCDTGAGTQG*TRLLETSVSSGGPG Trigger: ACCAGGTCCTCCTGAACTCACACTGGTCTCCAAGAGCCTCGTGCAGCCCTGCGTACCTGCCCCTGTGTCACAGTGCCTGACTAATGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | GTCATCTGTGGCATGCCTCTGGTCACTGAGCTGACACTGTCCCAGGCACCACTGGGCTGCACGAGGCTCTaGGAGACCAGTGTGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VICGMPLVTELTLSQAPLGCTRL*ETSVSS Trigger: TGAACTCACACTGGTCTCCAAGAGCCTCGTGCAGCC...CAGTGGTGCCTGGGACAGTGTCAGCTCAGTGACCAGAGGCATGCCACAGATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | GGCAGAGTGGGAAGCCTTGGAGCAGGATGCTACGGTTGGAAGACAAAGGGACAAGGCTGCACGAGGCTCTaGGAGACCAGTGTGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRVGSLGAGCYGWKTKGQGCTRL*ETSVSS Trigger: TGAACTCACACTGGTCTCCAAGAGCCTCGTGCAGCC...TTGTCCCTTTGTCTTCCAACCGTAGCATCCTGCTCCAAGGCTTCCCACTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS CCA 90 bp | AGGCCCAATAGACACCGTTTGGTTAGTGTGGCAGGCACGGCAGTTTaGGGGGAGTCTCTGGAACTTCTGGCAAAGGGGACATTTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPNRHRLVSVAGTAV*GESLELLAKGTFVE Trigger: CTCCACAAATGTCCCCTTTGCCAGAAGTTCCAGAGACTCCCCCCAAACTGCCGTGCCTGCCACACTAACCAAACGGTGTCTATTGGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | GCTACAGAAGGAAAAGGCCAGGCCATGCAACAGAAACTGTTTATTGAAACCTCAGCCCCGCCGCCGTCCTaGCTGCTCAGCCACACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATEGKGQAMQQKLFIETSAPPPS*LLSHTA Trigger: AGCTGTGTGGCTGAGCAGCAAGGACGGCGGCGGGGC...TGAGGTTTCAATAAACAGTTTCTGTTGCATGGCCTGGCCTTTTCCTTCTGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS-3UTR CAA 90 bp | GAACGACCTTGTAATGCCCCCATAATCCCTTATGCTCCTACCCAGGAGGACAGGGGCTGCACGAGGCTCTaGGAGACCAGTGTGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ERPCNAPIIPYAPTQEDRGCTRL*ETSVSS Trigger: TGAACTCACACTGGTCTCCAAGAGCCTCGTGCAGCC...CCTGTCCTCCTGGGTAGGAGCATAAGGGATTATGGGGGCATTACAAGGTCGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | GTGGTAACCAGAGAGGCCTGTGAAGAGAACACCCAAAAAGGCAGAGTGGGAAGCTGGCAAAGGGGACATTaGTGGAGAGGAGTAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVTREACEENTQKGRVGSWQRGH*WRGVGG Trigger: CCCTCCTACTCCTCTCCACAAATGTCCCCTTTGCCA...GCTTCCCACTCTGCCTTTTTGGGTGTTCTCTTCACAGGCCTCTCTGGTTACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS GCA 90 bp | AAGACTGGTGTATTACAGCCACTGATGCTACAGCTAGGGCCACGCTaGTCACATATGCCACAGCTAACAGGCAGGACAGCTTTACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: KTGVLQPLMLQLGPR*SHMPQLTGRTALPA Trigger: GGCTGGTAAAGCTGTCCTGCCTGTTAGCTGTGGCATATGTGAGCAGCGTGGCCCTAGCTGTAGCATCAGTGGCTGTAATACACCAGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | AAAGGGACAAGGTTAGAGGACCCAGCAATTCTTGGCTGTGACAGGGAGCTTCCTTGGCAAAGGGGACATTaGTGGAGAGGAGTAGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: KGTRLEDPAILGCDRELPWQRGH*WRGVGG Trigger: CCCTCCTACTCCTCTCCACAAATGTCCCCTTTGCCA...AGGAAGCTCCCTGTCACAGCCAAGAATTGCTGGGTCCTCTAACCTTGTCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS-3UTR CAA 90 bp | GAAGTTCTAAAGCAGCTCAGAGCAAACGCCTACATAGTGATTACAGGGCTGTGCTGGCAAAGGGGACATTaGTGGAGAGGAGTAGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: EVLKQLRANAYIVITGLCWQRGH*WRGVGG Trigger: CCCTCCTACTCCTCTCCACAAATGTCCCCTTTGCCA...GCACAGCCCTGTAATCACTATGTAGGCGTTTGCTCTGAGCTGCTTTAGAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168720.8 |
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| CDS CCA 90 bp | CCTCTTCCTCCCCTTCATCATAAAGGTATTTACTGGCCACCATCATaGAGATCAGAAACAAATCAGAAGACGACACGTGCTGCAGATAAT | + |
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Preference number: 5 (lower is better) Translates to: PLPPLHHKGIYWPPS*RSETNQKTTRAADN Trigger: ATTATCTGCAGCACGTGTCGTCTTCTGATTTGTTTCTGATCTCCATGATGGTGGCCAGTAAATACCTTTATGATGAAGGGGAGGAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000189403.7 ENSMUST00000190679.7 |
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| CDS CCA 72 bp | GAGAAATGGAGGGGCCACTGGGCTCCAGAGCCAGGGTaGGGCCAGGCCGCGGGCATGGTAAAGGGGGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: EKWRGHWAPEPG*GQAAGMVKGAG Trigger: TCCCGCCCCCTTTACCATGCCCGCGGCCTGGCCCCACCCTGGCTCTGGAGCCCAGTGGCCCCTCCATTTCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS CCA 72 bp | GCCACAGCTAACAGGCAGGACAGCTTTACCAGCCGCTaGCAGAGGGAGCCCAGAGCCAGCTGCCACGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: ATANRQDSFTSR*QREPRASCHVG Trigger: GCCAACGTGGCAGCTGGCTCTGGGCTCCCTCTGCCAGCGGCTGGTAAAGCTGTCCTGCCTGTTAGCTGTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS CAA 90 bp | GCTTTACCAGCCGCTGGCAGAGGGAGCCCAGAGCCAGCTGCCACGTaGGCTGCTCCAGCAGCACACACAGGTCTGTGTAGGTGTACCAGC | + |
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Preference number: 6 (lower is better) Translates to: ALPAAGRGSPEPAAT*AAPAAHTGLCRCTS Trigger: GCTGGTACACCTACACAGACCTGTGTGTGCTGCTGGAGCAGCCAACGTGGCAGCTGGCTCTGGGCTCCCTCTGCCAGCGGCTGGTAAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS CAA 90 bp | AGGCACTGTGACACAGGGGCAGGTACGCAGGGCTGCACGAGGCTCTaGGAGACCAGTGTGAGTTCAGGAGGACCTGGTGAGGGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RHCDTGAGTQGCTRL*ETSVSSGGPGEGLE Trigger: CTCCAGCCCCTCACCAGGTCCTCCTGAACTCACACTGGTCTCCAAGAGCCTCGTGCAGCCCTGCGTACCTGCCCCTGTGTCACAGTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS GCA 72 bp | CAAGGCATTGAGGGTGGCCACGGCGACTCCCCCAGCTaGCCCCCATTCGTCATTGAAGACCTCCTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QGIEGGHGDSPS*PPFVIEDLLFL Trigger: GAGGAAGAGGAGGTCTTCAATGACGAATGGGGGGCAGCTGGGGGAGTCGCCGTGGCCACCCTCAATGCCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000189403.7 ENSMUST00000190679.7 |
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| CDS GCA 72 bp | GAGGTCTCAGAGGGGGAGTCAATGGGGCCAGAAGACTaGCCCAGAGTGATGGCAAGTCTACACTGCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: EVSEGESMGPED*PRVMASLHCLP Trigger: TGGAAGGCAGTGTAGACTTGCCATCACTCTGGGGCAGTCTTCTGGCCCCATTGACTCCCCCTCTGAGACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS CCA 72 bp | AGACACCGTTTGGTTAGTGTGGCAGGCACGGCAGTTTaGGGGGAGTCTCTGGAACTTCTGGCAAAGGGGACA | + |
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Preference number: 6 (lower is better) Translates to: RHRLVSVAGTAV*GESLELLAKGT Trigger: TGTCCCCTTTGCCAGAAGTTCCAGAGACTCCCCCCAAACTGCCGTGCCTGCCACACTAACCAAACGGTGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000190679.7 |
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| CDS CCA 72 bp | AAACAAATCAGAAGACGACACGTGCTGCAGATAATCTaGGTTTCGGTGCCGGAGCCGCTCAATGTACACCAG | + |
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Preference number: 6 (lower is better) Translates to: KQIRRRHVLQII*VSVPEPLNVHQ Trigger: CTGGTGTACATTGAGCGGCTCCGGCACCGAAACCCAGATTATCTGCAGCACGTGTCGTCTTCTGATTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041213.12 ENSMUST00000168720.8 ENSMUST00000189403.7 ENSMUST00000190679.7 |
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