Pregenerated sensors for CNP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006782Ensembl transcript IDs: ENSMUST00000103120.5
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTTTTCCTGTGGCAGTAGCGTTTGTCCCTAGCATGTGGCAGCTCTaGGGCGTGTGCCCAGCTTTGGATGGGCAGGGGCTAAGGGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: CFPVAVAFVPSMWQL*GVCPALDGQGLREG Trigger: ACCCTCCCTTAGCCCCTGCCCATCCAAAGCTGGGCACACGCCTCAGAGCTGCCACATGCTAGGGACAAACGCTACTGCCACAGGAAAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CCA 90 bp | CCAGAGGCACCATGCAGGCAAGATGGGCTGGGCAGAAAGCAAAGCTaGAGCTTCTCGGGGCATCTTTCTGACCTTGGCCTCCATCCACAC | + |
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Preference number: 1 (lower is better) Translates to: PEAPCRQDGLGRKQS*SFSGHLSDLGLHPH Trigger: GTGTGGATGGAGGCCAAGGTCAGAAAGATGCCCCGAGAAGCTCCAGCTTTGCTTTCTGCCCAGCCCATCTTGCCTGCATGGTGCCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR TCA 90 bp | TGGGCTGGGCAGAAAGCAAAGCTGGAGCTTCTCGGGGCATCTTTCTaGCCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: WAGQKAKLELLGASF*PWPPSTQQRHAAGD Trigger: ATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAGATGCCCCGAGAAGCTCCAGCTTTGCTTTCTGCCCAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CCA 90 bp | GATGCTGCTGCAGGCCCAATGACCCAGCCCTTTTATTACCACCTCTaGTCCAGGTTCCTGAATGGTATCTTCCTCTGCCCACCCGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: DAAAGPMTQPFYYHL*SRFLNGIFLCPPAC Trigger: ACAGGCGGGTGGGCAGAGGAAGATACCATTCAGGAACCTGGACCAGAGGTGGTAATAAAAGGGCTGGGTCATTGGGCCTGCAGCAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CCA 90 bp | CACCCTCCTTTAAAGACCCAGAGGCACCATGCAGGCAAGATGGGCTaGGCAGAAAGCAAAGCTGGAGCTTCTCGGGGCATCTTTCTGACC | + |
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Preference number: 1 (lower is better) Translates to: HPPLKTQRHHAGKMG*AESKAGASRGIFLT Trigger: GGTCAGAAAGATGCCCCGAGAAGCTCCAGCTTTGCTTTCTGCCCAGCCCATCTTGCCTGCATGGTGCCTCTGGGTCTTTAAAGGAGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR GCA 90 bp | GGTTCTTGGTACCTACCACCCTCCTTTAAAGACCCAGAGGCACCATaGAGGCAAGATGGGCTGGGCAGAAAGCAAAGCTGGAGCTTCTCG | + |
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Preference number: 1 (lower is better) Translates to: GSWYLPPSFKDPEAP*RQDGLGRKQSWSFS Trigger: CGAGAAGCTCCAGCTTTGCTTTCTGCCCAGCCCATCTTGCCTGCATGGTGCCTCTGGGTCTTTAAAGGAGGGTGGTAGGTACCAAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR GCA 90 bp | GGGGCTAAGGGAGGGTTAACAAGTTCTTGGATGCATCTGGGCAGATaGTGCTGCAGGCCCAATGACCCAGCCCTTTTATTACCACCTCTG | + |
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Preference number: 1 (lower is better) Translates to: GAKGGLTSSWMHLGR*CCRPNDPALLLPPL Trigger: CAGAGGTGGTAATAAAAGGGCTGGGTCATTGGGCCTGCAGCAGCATCTGCCCAGATGCATCCAAGAACTTGTTAACCCTCCCTTAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CCA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATaGCCTGACCGAAACCATCACCCTAGGTACAGTGTGAAGGAGATA | + |
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Preference number: 1 (lower is better) Translates to: LTLASIHTAETCCWR*PDRNHHPRYSVKEI Trigger: TATCTCCTTCACACTGTACCTAGGGTGATGGTTTCGGTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR TCA 90 bp | ATCCCAGATTCTCGGGTGACAACCCAATTAGCAAGGTCCTGTTACTaGGCAGAAGGCAGAGTGAGGTACTCCAGGAGCCAGGCTTTGCCA | + |
|
Preference number: 1 (lower is better) Translates to: IPDSRVTTQLARSCY*AEGRVRYSRSQALP Trigger: TGGCAAAGCCTGGCTCCTGGAGTACCTCACTCTGCCTTCTGCTCAGTAACAGGACCTTGCTAATTGGGTTGTCACCCGAGAATCTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR GCA 90 bp | GCTAAGGGAGGGTTAACAAGTTCTTGGATGCATCTGGGCAGATGCTaGTGCAGGCCCAATGACCCAGCCCTTTTATTACCACCTCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: AKGGLTSSWMHLGRC*CRPNDPALLLPPLV Trigger: GACCAGAGGTGGTAATAAAAGGGCTGGGTCATTGGGCCTGCAGCAGCATCTGCCCAGATGCATCCAAGAACTTGTTAACCCTCCCTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CCA 90 bp | ATCTTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTaGAGATGGCCTGACCGAAACCATCACCCTAGGTACAGTGTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: IFLTLASIHTAETCC*RWPDRNHHPRYSVK Trigger: CTTCACACTGTACCTAGGGTGATGGTTTCGGTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR TCA 90 bp | GTCCAGGTTCCTGAATGGTATCTTCCTCTGCCCACCCGCCTGTGTTaGGAGCTGAGTATTAAGAGGAAAAGAAAGGGTGGGCACAAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: VQVPEWYLPLPTRLC*ELSIKRKRKGGHKE Trigger: TTCCTTGTGCCCACCCTTTCTTTTCCTCTTAATACTCAGCTCTCAACACAGGCGGGTGGGCAGAGGAAGATACCATTCAGGAACCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR CCA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACGTGCCCAGCTTTGGATaGGCAGGGGCTAAGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LTLASIHTAETCCWRWPDVPSFG*AGAKGG Trigger: CCCTCCCTTAGCCCCTGCCCATCCAAAGCTGGGCAC...GTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGGTCCACCCACAGCAGTaGTACAGTGGTACAGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: PGARLCQSRRWGLLLPAQVHPQQ*YSGTAV Trigger: CACCGCTGTACCACTGTACCACTGCTGTGGGTGGAC...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR GCA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACCATCTGGGCAGATGCTaGTGCAGGCCCAATGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: LTLASIHTAETCCWRWPDHLGRC*CRPNDP Trigger: TGGGTCATTGGGCCTGCAGCAGCATCTGCCCAGATG...GTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGACAGCAGAGACATGCTaGTGGAGATGGCCTGACCGA | + |
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Preference number: 2 (lower is better) Translates to: PGARLCQSRRWGLLLPAQTAETC*WRWPDR Trigger: TCGGTCAGGCCATCTCCAGCAGCATGTCTCTGCTGT...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGGCAGGCAAGATGGGCTaGGCAGAAAGCAAAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: PGARLCQSRRWGLLLPAQAGKMG*AESKAG Trigger: TCCAGCTTTGCTTTCTGCCCAGCCCATCTTGCCTGC...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR GCA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACATGCATCTGGGCAGATaGTGCTGCAGGCCCAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: LTLASIHTAETCCWRWPDMHLGR*CCRPND Trigger: GTCATTGGGCCTGCAGCAGCATCTGCCCAGATGCAT...GTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CAA 90 bp | TGGGCAGAAAGCAAAGCTGGAGCTTCTCGGGGCATCTTTCTGACCTaGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCT | + |
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Preference number: 2 (lower is better) Translates to: WAESKAGASRGIFLT*ASIHTAETCCWRWP Trigger: AGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAGATGCCCCGAGAAGCTCCAGCTTTGCTTTCTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTTGGCACCCAGGGATCTaGGCCCTCTCTAAGCTACCA | + |
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Preference number: 2 (lower is better) Translates to: FLTLASIHTAETCCWRWPWHPGI*ALSKLP Trigger: TGGTAGCTTAGAGAGGGCTCAGATCCCTGGGTGCCA...AGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR GCA 90 bp | AGATGGGGCTTACTCTTGCCAGCTCAGGGTCCCCTCCACTGGTTCTTGGTACCTAGGTGGAAGGCATGTTaGTGTGTCCACCCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RWGLLLPAQGPLHWFLVPRWKAC*CVHPQQ Trigger: CTGCTGTGGGTGGACACAGCAACATGCCTTCCACCT...AGGTACCAAGAACCAGTGGAGGGGACCCTGAGCTGGCAAGAGTAAGCCCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACCGAAACCGTCCAGGTTCCTGAATaGTATCTTCCTCTGCCCACC | + |
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Preference number: 2 (lower is better) Translates to: WPPSTQQRHAAGDGLTETVQVPE*YLPLPT Trigger: GGTGGGCAGAGGAAGATACCATTCAGGAACCTGGAC...GGTTTCGGTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGATCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTGTTCTTGGATGCATCTaGGCAGATGCTGCTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QGSEPSLSYHCFPVAVAFVLGCI*ADAAAG Trigger: GCCTGCAGCAGCATCTGCCCAGATGCATCCAAGAAC...AAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGATCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCGGGTTAACAAGTTCTTaGATGCATCTGGGCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: LSDLGLHPHSRDMLLEMAGLTSS*MHLGRC Trigger: GCATCTGCCCAGATGCATCCAAGAACTTGTTAACCC...GGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR TCA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACGCCTGTGTTGAGAGCTaGGTATTAAGAGGAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LTLASIHTAETCCWRWPDACVES*VLRGKE Trigger: TTCTTTTCCTCTTAATACTCAGCTCTCAACACAGGC...GTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGGATCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTAATGGTATCTTCCTCTaGCCACCCGCCTGTGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: QGSEPSLSYHCFPVAVAFNGIFL*PPACVE Trigger: CTCAACACAGGCGGGTGGGCAGAGGAAGATACCATT...AAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGATCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTGTCCCTATCTTAAAAATCAGGTaGAAGGCATGTTGCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SEPSLSYHCFPVAVAFVPILKIR*KACCCV Trigger: GACACAGCAACATGCCTTCCACCTGATTTTTAAGAT...AGGGACAAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR TCA 72 bp | GTGGCAGTAGCGTTTGTCCCTAGCATGTGGCAGCTCTaGGGCGTGTGCCCAGCTTTGGATGGGCAGGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: VAVAFVPSMWQL*GVCPALDGQGL Trigger: TAGCCCCTGCCCATCCAAAGCTGGGCACACGCCTCAGAGCTGCCACATGCTAGGGACAAACGCTACTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CCA 72 bp | CATGTGGCAGCTCTGAGGCGTGTGCCCAGCTTTGGATaGGCAGGGGCTAAGGGAGGGTTAACAAGTTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: HVAALRRVPSFG*AGAKGGLTSSW Trigger: CCAAGAACTTGTTAACCCTCCCTTAGCCCCTGCCCATCCAAAGCTGGGCACACGCCTCAGAGCTGCCACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CCA 72 bp | ACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTaGAGATGGCCTGACCGAAACCATCACCCTAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: TLASIHTAETCC*RWPDRNHHPRY Trigger: GTACCTAGGGTGATGGTTTCGGTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR-3UTR CAA 90 bp | AGGCCCAATGACCCAGCCCTTTTATTACCACCTCTGGTCCAGGTTCCTGAATGGCAGGTGGAAGGCATGTaGCTGTGTCCACCCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: RPNDPALLLPPLVQVPEWQVEGM*LCPPTA Trigger: TGCTGTGGGTGGACACAGCAACATGCCTTCCACCTG...CCATTCAGGAACCTGGACCAGAGGTGGTAATAAAAGGGCTGGGTCATTGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR GCA 72 bp | TACCTACCACCCTCCTTTAAAGACCCAGAGGCACCATaGAGGCAAGATGGGCTGGGCAGAAAGCAAAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: YLPPSFKDPEAP*RQDGLGRKQSW Trigger: CCAGCTTTGCTTTCTGCCCAGCCCATCTTGCCTGCATGGTGCCTCTGGGTCTTTAAAGGAGGGTGGTAGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR TCA 72 bp | CAGAAAGCAAAGCTGGAGCTTCTCGGGGCATCTTTCTaGCCTTGGCCTCCATCCACACAGCAGAGACATGCT | + |
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Preference number: 3 (lower is better) Translates to: QKAKLELLGASF*PWPPSTQQRHA Trigger: AGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAGATGCCCCGAGAAGCTCCAGCTTTGCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CCA 72 bp | GCAGGCCCAATGACCCAGCCCTTTTATTACCACCTCTaGTCCAGGTTCCTGAATGGTATCTTCCTCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: AGPMTQPFYYHL*SRFLNGIFLCP Trigger: TGGGCAGAGGAAGATACCATTCAGGAACCTGGACCAGAGGTGGTAATAAAAGGGCTGGGTCATTGGGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR GCA 72 bp | GGGTTAACAAGTTCTTGGATGCATCTGGGCAGATGCTaGTGCAGGCCCAATGACCCAGCCCTTTTATTACCA | + |
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Preference number: 3 (lower is better) Translates to: GLTSSWMHLGRC*CRPNDPALLLP Trigger: TGGTAATAAAAGGGCTGGGTCATTGGGCCTGCAGCAGCATCTGCCCAGATGCATCCAAGAACTTGTTAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR GCA 72 bp | GGAGGGTTAACAAGTTCTTGGATGCATCTGGGCAGATaGTGCTGCAGGCCCAATGACCCAGCCCTTTTATTA | + |
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Preference number: 3 (lower is better) Translates to: GGLTSSWMHLGR*CCRPNDPALLL Trigger: TAATAAAAGGGCTGGGTCATTGGGCCTGCAGCAGCATCTGCCCAGATGCATCCAAGAACTTGTTAACCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR GCA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGGTGTGGACTTGCCGCTaGCCGGCAGGCCGCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGARLCQSRRWGLLLPAQVWTCR*PAGRAG Trigger: TCCTGCGCGGCCTGCCGGGCAGCGGCAAGTCCACAC...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR TCA 90 bp | TGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACCGAAACCCACAACTGCAGCTCCTaGTCGGTCAGCACCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: WPPSTQQRHAAGDGLTETHNCSS*SVSTTW Trigger: CCAGGTGGTGCTGACCGATCAGGAGCTGCAGTTGTG...GGTTTCGGTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| 3UTR CAA 72 bp | GCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTaGCCAGCTCAGGGTCCCCTCCACTGGTTCTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: ARLCQSRRWGLL*PAQGPLHWFLV Trigger: TACCAAGAACCAGTGGAGGGGACCCTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR TCA 90 bp | AGATGGGGCTTACTCTTGCCAGCTCAGGGTCCCCTCCACTGGTTCTTGGTACCTGCAGGCCGCGCAGGATaGATAGCGTCTTGCACTCGT | + |
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Preference number: 4 (lower is better) Translates to: RWGLLLPAQGPLHWFLVPAGRAG*IASCTR Trigger: ACGAGTGCAAGACGCTATTCATCCTGCGCGGCCTGC...AGGTACCAAGAACCAGTGGAGGGGACCCTGAGCTGGCAAGAGTAAGCCCCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR GCA 90 bp | AGATGGGGCTTACTCTTGCCAGCTCAGGGTCCCCTCCACTGGTTCTTGGTACCTCTGGGCGTATTCTTCTaGCCCAGCGGCCTTCCCGTA | + |
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Preference number: 4 (lower is better) Translates to: RWGLLLPAQGPLHWFLVPLGVFF*PSGLPV Trigger: TACGGGAAGGCCGCTGGGGCAGAAGAATACGCCCAG...AGGTACCAAGAACCAGTGGAGGGGACCCTGAGCTGGCAAGAGTAAGCCCCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR GCA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGGTATGGGCACAGGTTTaGCCTTCCCATAGTACCCCG | + |
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Preference number: 4 (lower is better) Translates to: PGARLCQSRRWGLLLPAQVWAQV*PSHSTP Trigger: CGGGGTACTATGGGAAGGGCAAACCTGTGCCCATAC...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR CCA 90 bp | TACCACCTCTGGTCCAGGTTCCTGAATGGTATCTTCCTCTGCCCACCCGCCTGTAGCGTCTTGCACTCGTaGAGGGTAGCCACCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: YHLWSRFLNGIFLCPPACSVLHS*RVATVS Trigger: GGACACGGTGGCTACCCTCCACGAGTGCAAGACGCT...ACAGGCGGGTGGGCAGAGGAAGATACCATTCAGGAACCTGGACCAGAGGTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR CCA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGTCCTCCAGAAAGACCTaGCCAGCTTTTCGGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PGARLCQSRRWGLLLPAQSSRKT*PAFRRV Trigger: GACCCTCCGAAAAGCTGGCCAGGTCTTTCTGGAGGA...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR CCA 90 bp | TGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACCGAAACCGGGCCCCAGCTGTCTTaGGTGTCACAAAGAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: WPPSTQQRHAAGDGLTETGPQLS*VSQREQ Trigger: CTGCTCTCTTTGTGACACCCAAGACAGCTGGGGCCC...GGTTTCGGTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR CCA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGGCTTGTCCAGATCACTaGGCCACAACTGCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PGARLCQSRRWGLLLPAQACPDH*ATTAAP Trigger: AGGAGCTGCAGTTGTGGCCCAGTGATCTGGACAAGC...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR CCA 90 bp | CTTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCGCCCTCGGAGGCAGATaGCTTGTCCAGATCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: LSDLGLHPHSRDMLLEMAALGGR*LVQITG Trigger: CCCAGTGATCTGGACAAGCCATCTGCCTCCGAGGGC...GGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR TCA 90 bp | CTTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCCCCGAGAGCCAGGGATaGTCTTGTAAGCATCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSDLGLHPHSRDMLLEMAPESQG*SCKHQR Trigger: CCGCTGATGCTTACAAGATCATCCCTGGCTCTCGGG...GGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAATCAGGTGGAAGGCATGTTGCTGTGTCCACCCACAGCAGTGGTACAGCCCGTCTGCACTGGCTaGACGTCGGCCGCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKNQVEGMLLCPPTAVVQPVCTG*TSAAQP Trigger: AGGCTGTGCGGCCGACGTGCAGCCAGTGCAGACGGG...CTGTACCACTGCTGTGGGTGGACACAGCAACATGCCTTCCACCTGATTTTTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACCGAAACCGCATCCATCGCCCTTTaGCCAGGGAATAGAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WPPSTQQRHAAGDGLTETASIAL*PGNRAC Trigger: GCAAGCTCTATTCCCTGGGCAAAGGGCGATGGATGC...GGTTTCGGTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR TCA 90 bp | AGGCCCAATGACCCAGCCCTTTTATTACCACCTCTGGTCCAGGTTCCTGAATGGCAAGCACAAGAACCCTaGTGTCCCGGCGGCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPNDPALLLPPLVQVPEWQAQEP*CPGGSS Trigger: GCTACTGCCGCCGGGACATCAGGGTTCTTGTGCTTG...CCATTCAGGAACCTGGACCAGAGGTGGTAATAAAAGGGCTGGGTCATTGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR GCA 90 bp | CAGGGATCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTAGGTCAAGACCCGTCTaGACTGGCTGCACGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGSEPSLSYHCFPVAVAFRSRPV*TGCTSA Trigger: GGCCGACGTGCAGCCAGTGCAGACGGGTCTTGACCT...AAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGATCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | TCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTGTCCCTGTCGCCACGCTGTCTTaGGCTCCACCAGCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SEPSLSYHCFPVAVAFVPVATLS*APPAPP Trigger: AGGTGGTGCTGGTGGAGCCCAAGACAGCGTGGCGAC...AGGGACAAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | TACCACCTCTGGTCCAGGTTCCTGAATGGTATCTTCCTCTGCCCACCCGCCTGTGCCGACAGCTGCCATTaGTTCTTCTCCTTGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YHLWSRFLNGIFLCPPACADSCH*FFSLSW Trigger: CCAGCTCAAGGAGAAGAACCAATGGCAGCTGTCGGC...ACAGGCGGGTGGGCAGAGGAAGATACCATTCAGGAACCTGGACCAGAGGTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGCCAGCCAAAGTAGAGTaGCAGAAAGTCCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGARLCQSRRWGLLLPAQPAKVE*QKVLLQ Trigger: CTGGAGAAGGACTTTCTGCCACTCTACTTTGGCTGG...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | TACCACCTCTGGTCCAGGTTCCTGAATGGTATCTTCCTCTGCCCACCCGCCTGTTTCACCACCTCCTGCTaGGCGTATTCTTCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YHLWSRFLNGIFLCPPACFTTSC*AYSSAP Trigger: TGGGGCAGAAGAATACGCCCAGCAGGAGGTGGTGAA...ACAGGCGGGTGGGCAGAGGAAGATACCATTCAGGAACCTGGACCAGAGGTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| 3UTR CAA 72 bp | AGCAAAGCTGGAGCTTCTCGGGGCATCTTTCTGACCTaGGCCTCCATCCACACAGCAGAGACATGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKAGASRGIFLT*ASIHTAETCCW Trigger: CCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAGATGCCCCGAGAAGCTCCAGCTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTCGGACACCATCTTGGTaGCGTCGTGGTACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLTLASIHTAETCCWRWPRTPSW*RRGTSP Trigger: TGGAGAAGTACCACGACGGCACCAAGATGGTGTCCG...AGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | TTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTCAGCGGACACCATCTTaGTGCCGTCGTGGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLTLASIHTAETCCWRWPQRTPS*CRRGTS Trigger: AGAAGTACCACGACGGCACCAAGATGGTGTCCGCTG...AGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACGCTCCCGCTCGTGGTTaGTATCATCAAGCACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLASIHTAETCCWRWPDAPARG*YHQAQE Trigger: TTCTTGTGCTTGATGATACCAACCACGAGCGGGAGC...GTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR TCA 90 bp | TGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACCGAAACCAGGATGACATTTTCCTaGAGAAGAGCTTGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WPPSTQQRHAAGDGLTETRMTFS*RRAWAG Trigger: TCCTGCCCAAGCTCTTCTTCAGGAAAATGTCATCCT...GGTTTCGGTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR TCA 90 bp | TCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTGTCCCTGCCATTTCAAAAAGCTaGTCCAGCCGCTCCCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SEPSLSYHCFPVAVAFVPAISKS*SSRSRS Trigger: CGAGCGGGAGCGGCTGGATCAGCTTTTTGAAATGGC...AGGGACAAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAATGACCCAGCCCTTTTATTACCACCTCTGGTCCAGGTTCCTGAATGGAGCCGCTCCCGCTCGTaGTTGGTATCATCAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RPNDPALLLPPLVQVPEWSRSRS*LVSSST Trigger: TGTGCTTGATGATACCAACCACGAGCGGGAGCGGCT...CCATTCAGGAACCTGGACCAGAGGTGGTAATAAAAGGGCTGGGTCATTGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGATCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTTCCGGCTGCCATGTATaGGCACAGGTTTGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGSEPSLSYHCFPVAVAFSGCHV*AQVCPS Trigger: GGAAGGGCAAACCTGTGCCCATACATGGCAGCCGGA...AAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGATCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTAGCACCACCTGGTACTaGTACTGGTCTGCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLTLASIHTAETCCWRWPSTTWY*YWSAIS Trigger: TGAAATGGCAGACCAGTATCAGTACCAGGTGGTGCT...AGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR GCA 90 bp | AGGCCCAATGACCCAGCCCTTTTATTACCACCTCTGGTCCAGGTTCCTGAATGGTCATCGGCCGACAGCTaGCATTGGTTCTTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPNDPALLLPPLVQVPEWSSADS*HWFFSL Trigger: CAAGGAGAAGAACCAATGGCAGCTGTCGGCCGATGA...CCATTCAGGAACCTGGACCAGAGGTGGTAATAAAAGGGCTGGGTCATTGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | ATCAGGTGGAAGGCATGTTGCTGTGTCCACCCACAGCAGTGGTACAGTGGTACATTCTTCTCCTTGAGCTaGGCACAGTCTAGTCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IRWKACCCVHPQQWYSGTFFSLS*AQSSRH Trigger: GTGGCGACTAGACTGTGCCCAGCTCAAGGAGAAGAA...TGTACCACTGTACCACTGCTGTGGGTGGACACAGCAACATGCCTTCCACCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR GCA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACGTACTGATACTGGTCTaGCATTTCAAAAAGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LTLASIHTAETCCWRWPDVLILV*HFKKLI Trigger: GATCAGCTTTTTGAAATGGCAGACCAGTATCAGTAC...GTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTTTTATTACCACCTCTGGTCCAGGTTCCTGAATGGTATCTTCCTCTGCATCTTGGTGCCGTCGTaGTACTTCTCCAGGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPFYYHLWSRFLNGIFLCILVPS*YFSRMS Trigger: GCTCATCCTGGAGAAGTACCACGACGGCACCAAGAT...GCAGAGGAAGATACCATTCAGGAACCTGGACCAGAGGTGGTAATAAAAGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTCTCAGAACTCTTTTTaGTCAGGAACCAGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSDLGLHPHSRDMLLEMASQNSF*SGTSQS Trigger: ACTTTGGCTGGTTCCTGACCAAAAAGAGTTCTGAGA...GGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | TCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTGTCCCTTTGGGCAGGAATGTGTaGCTTTTGCGGGTAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEPSLSYHCFPVAVAFVPLGRNV*LLRVKL Trigger: AAGCTTTACCCGCAAAAGCCACACATTCCTGCCCAA...AGGGACAAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGATCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTACAGTGCAGCACACCTaGAGGTCTCTTTCCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QGSEPSLSYHCFPVAVAFTVQHT*RSLSKV Trigger: TACTTTGGAAAGAGACCTCCAGGTGTGCTGCACTGT...AAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGATCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS TCA 90 bp | CCCGTCTGCACTGGCTGCACGTCGGCCGCACAGCCTAGGGTGACGTaGGCTCGGCTCCCTGGGGGCAGGCCCTCGGAGGCAGATGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVCTGCTSAAQPRVT*ARLPGGRPSEADGL Trigger: CAAGCCATCTGCCTCCGAGGGCCTGCCCCCAGGGAGCCGAGCTCACGTCACCCTAGGCTGTGCGGCCGACGTGCAGCCAGTGCAGACGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS TCA 90 bp | CAAGACCCGTCTGCACTGGCTGCACGTCGGCCGCACAGCCTAGGGTaGCGTGAGCTCGGCTCCCTGGGGGCAGGCCCTCGGAGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QDPSALAARRPHSLG*RELGSLGAGPRRQM Trigger: CATCTGCCTCCGAGGGCCTGCCCCCAGGGAGCCGAGCTCACGTCACCCTAGGCTGTGCGGCCGACGTGCAGCCAGTGCAGACGGGTCTTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS CCA 90 bp | TCCCTGGGGGCAGGCCCTCGGAGGCAGATGGCTTGTCCAGATCACTaGGCCACAACTGCAGCTCCTGATCGGTCAGCACCACCTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGAGPRRQMACPDH*ATTAAPDRSAPPGP Trigger: GGGCCCAGGTGGTGCTGACCGATCAGGAGCTGCAGTTGTGGCCCAGTGATCTGGACAAGCCATCTGCCTCCGAGGGCCTGCCCCCAGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS TCA 90 bp | CATCAGCGGACACCATCTTGGTGCCGTCGTGGTACTTCTCCAGGATaGGCCGAGCCAGTGTGGACTTGCCGCTGCCCGGCAGGCCGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: HQRTPSWCRRGTSPG*AEPVWTCRCPAGRA Trigger: TGCGCGGCCTGCCGGGCAGCGGCAAGTCCACACTGGCTCGGCTCATCCTGGAGAAGTACCACGACGGCACCAAGATGGTGTCCGCTGATG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS CCA 90 bp | GGTGACGTGAGCTCGGCTCCCTGGGGGCAGGCCCTCGGAGGCAGATaGCTTGTCCAGATCACTGGGCCACAACTGCAGCTCCTGATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GDVSSAPWGQALGGR*LVQITGPQLQLLIG Trigger: ACCGATCAGGAGCTGCAGTTGTGGCCCAGTGATCTGGACAAGCCATCTGCCTCCGAGGGCCTGCCCCCAGGGAGCCGAGCTCACGTCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CAA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACCGAGCCAGTGTGGACTaGCCGCTGCCCGGCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LTLASIHTAETCCWRWPDRASVD*PLPGRP Trigger: CGGCCTGCCGGGCAGCGGCAAGTCCACACTGGCTCG...GTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS TCA 90 bp | CCAGCCGCTCCCGCTCGTGGTTGGTATCATCAAGCACAAGAACCCTaGTGTCCCGGCGGCAGTAGCCAGCCAGGTCCTCGTCTAGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAAPARGWYHQAQEP*CPGGSSQPGPRLDA Trigger: AGCGTCTAGACGAGGACCTGGCTGGCTACTGCCGCCGGGACATCAGGGTTCTTGTGCTTGATGATACCAACCACGAGCGGGAGCGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS CCA 90 bp | TTCAGGTCATCGGCCGACAGCTGCCATTGGTTCTTCTCCTTGAGCTaGGCACAGTCTAGTCGCCACGCTGTCTTGGGCTCCACCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: FRSSADSCHWFFSLS*AQSSRHAVLGSTST Trigger: GGTGCTGGTGGAGCCCAAGACAGCGTGGCGACTAGACTGTGCCCAGCTCAAGGAGAAGAACCAATGGCAGCTGTCGGCCGATGACCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS CCA 90 bp | AGCCCGGGCTTCAGCTTCTTCAGGTCATCGGCCGACAGCTGCCATTaGTTCTTCTCCTTGAGCTGGGCACAGTCTAGTCGCCACGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGFSFFRSSADSCH*FFSLSWAQSSRHAV Trigger: GACAGCGTGGCGACTAGACTGTGCCCAGCTCAAGGAGAAGAACCAATGGCAGCTGTCGGCCGATGACCTGAAGAAGCTGAAGCCCGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CAA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACTCGGAGGCAGATGGCTaGTCCAGATCACTGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LTLASIHTAETCCWRWPDSEADG*SRSLGH Trigger: GTGGCCCAGTGATCTGGACAAGCCATCTGCCTCCGA...GTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS GCA 90 bp | TTCTCCAGCCCGGGCTTCAGCTTCTTCAGGTCATCGGCCGACAGCTaGCATTGGTTCTTCTCCTTGAGCTGGGCACAGTCTAGTCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSSPGFSFFRSSADS*HWFFSLSWAQSSRH Trigger: GTGGCGACTAGACTGTGCCCAGCTCAAGGAGAAGAACCAATGGCAGCTGTCGGCCGATGACCTGAAGAAGCTGAAGCCCGGGCTGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGTCCTCGTCTAGACGCTaGTACGCCTCGGAGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGARLCQSRRWGLLLPAQSSSRR*YASEKS Trigger: AGACTTCTCCGAGGCGTACAAGCGTCTAGACGAGGA...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS TCA 90 bp | CTAGACGCTTGTACGCCTCGGAGAAGTCTGCCCGAGAGCCAGGGATaGTCTTGTAAGCATCAGCGGACACCATCTTGGTGCCGTCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDACTPRRSLPESQG*SCKHQRTPSWCRRG Trigger: ACCACGACGGCACCAAGATGGTGTCCGCTGATGCTTACAAGATCATCCCTGGCTCTCGGGCAGACTTCTCCGAGGCGTACAAGCGTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS GCA 90 bp | CGCTGTCTTGGGCTCCACCAGCACCACCTGGTACTGATACTGGTCTaGCATTTCAAAAAGCTGATCCAGCCGCTCCCGCTCGTGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCLGLHQHHLVLILV*HFKKLIQPLPLVVG Trigger: ACCAACCACGAGCGGGAGCGGCTGGATCAGCTTTTTGAAATGGCAGACCAGTATCAGTACCAGGTGGTGCTGGTGGAGCCCAAGACAGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGCCCGTGAAGATGGCCTaGACCTCCATCTTCTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGARLCQSRRWGLLLPAQPVKMA*TSIFLV Trigger: GACTAAGAAGATGGAGGTCAAGGCCATCTTCACGGG...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAATCAGGTGGAAGGCATGTTGCTGTGTCCACCCACAGCAGTGGTACAGAGTCGCCACGCTGTCTaGGGCTCCACCAGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LKNQVEGMLLCPPTAVVQSRHAV*GSTSTT Trigger: GGTGGTGCTGGTGGAGCCCAAGACAGCGTGGCGACT...CTGTACCACTGCTGTGGGTGGACACAGCAACATGCCTTCCACCTGATTTTTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGCCAGGCTTTGCCAGAGCAGGAGATGGGGCTTACTCTTGCCAGCTCAGGCAGAGATGGACAGTTaGAAGGCCTTGCCATACGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGARLCQSRRWGLLLPAQAEMDS*KALPYD Trigger: ATCGTATGGCAAGGCCTTCAAACTGTCCATCTCTGC...CTGAGCTGGCAAGAGTAAGCCCCATCTCCTGCTCTGGCAAAGCCTGGCTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS TCA 90 bp | CCCCAGCTGTCTTGGGTGTCACAAAGAGAGCAGAGATGGACAGTTTaGAGGCCTTGCCATACGATCTCTTCACCACCTCCTGCTGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PQLSWVSQREQRWTV*RPCHTISSPPPAGR Trigger: ACGCCCAGCAGGAGGTGGTGAAGAGATCGTATGGCAAGGCCTTCAAACTGTCCATCTCTGCTCTCTTTGTGACACCCAAGACAGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CAA 90 bp | CTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCTGACGCTCTGGCTTCTCCTTaGCTCCTGAGGATGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: LTLASIHTAETCCWRWPDALASP*LLRMTF Trigger: AAATGTCATCCTCAGGAGCAAAGGAGAAGCCAGAGC...GTCAGGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CAA 90 bp | ATCAGGTGGAAGGCATGTTGCTGTGTCCACCCACAGCAGTGGTACAGTGGTACAGGCCGACAGCTGCCATaGGTTCTTCTCCTTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IRWKACCCVHPQQWYSGTGRQLP*VLLLEL Trigger: CAGCTCAAGGAGAAGAACCAATGGCAGCTGTCGGCC...TGTACCACTGTACCACTGCTGTGGGTGGACACAGCAACATGCCTTCCACCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
||
| CDS-3UTR CAA 90 bp | ATCAGGTGGAAGGCATGTTGCTGTGTCCACCCACAGCAGTGGTACAGTGGTACATGGGCCCCAGCTGTCTaGGGTGTCACAAAGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IRWKACCCVHPQQWYSGTWAPAV*GVTKRA Trigger: TGCTCTCTTTGTGACACCCAAGACAGCTGGGGCCCA...TGTACCACTGTACCACTGCTGTGGGTGGACACAGCAACATGCCTTCCACCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 90 bp | GGGCGTATTCTTCTGCCCCAGCGGCCTTCCCGTAGTCACAGAATTTaGTTGTACAGTGCAGCACACCTGGAGGTCTCTTTCCAAAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: GRILLPQRPSRSHRI*LYSAAHLEVSFQSS Trigger: GCTACTTTGGAAAGAGACCTCCAGGTGTGCTGCACTGTACAACCAAATTCTGTGACTACGGGAAGGCCGCTGGGGCAGAAGAATACGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 90 bp | GAGGGTCTCAGAACTCTTTTTGGTCAGGAACCAGCCAAAGTAGAGTaGCAGAAAGTCCTTCTCCAGCCCGGGCTTCAGCTTCTTCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: EGLRTLFGQEPAKVE*QKVLLQPGLQLLQV Trigger: GACCTGAAGAAGCTGAAGCCCGGGCTGGAGAAGGACTTTCTGCCACTCTACTTTGGCTGGTTCCTGACCAAAAAGAGTTCTGAGACCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR CAA 90 bp | CTTTCTGACCTTGGCCTCCATCCACACAGCAGAGACATGCTGCTGGAGATGGCCAGGAATGTGTGGCTTTaGCGGGTAAAGCTTGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LSDLGLHPHSRDMLLEMARNVWL*RVKLVF Trigger: GAACACAAGCTTTACCCGCAAAAGCCACACATTCCT...GGCCATCTCCAGCAGCATGTCTCTGCTGTGTGGATGGAGGCCAAGGTCAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR CAA 90 bp | GACCCAGCCCTTTTATTACCACCTCTGGTCCAGGTTCCTGAATGGTATCTTCCTCGCTCCCGCTCGTGGTaGGTATCATCAAGCACAAGA | + |
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Preference number: 5 (lower is better) Translates to: DPALLLPPLVQVPEWYLPRSRSW*VSSSTR Trigger: TCTTGTGCTTGATGATACCAACCACGAGCGGGAGCG...AGGAAGATACCATTCAGGAACCTGGACCAGAGGTGGTAATAAAAGGGCTGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR CAA 90 bp | ATCAGGTGGAAGGCATGTTGCTGTGTCCACCCACAGCAGTGGTACAGTGGTACACATTGGTTCTTCTCCTaGAGCTGGGCACAGTCTAGT | + |
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Preference number: 5 (lower is better) Translates to: IRWKACCCVHPQQWYSGTHWFFS*SWAQSS Trigger: ACTAGACTGTGCCCAGCTCAAGGAGAAGAACCAATG...TGTACCACTGTACCACTGCTGTGGGTGGACACAGCAACATGCCTTCCACCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 90 bp | CCAGAAAGACCTGGCCAGCTTTTCGGAGGGTCTCAGAACTCTTTTTaGTCAGGAACCAGCCAAAGTAGAGTGGCAGAAAGTCCTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PERPGQLFGGSQNSF*SGTSQSRVAESPSP Trigger: TGGAGAAGGACTTTCTGCCACTCTACTTTGGCTGGTTCCTGACCAAAAAGAGTTCTGAGACCCTCCGAAAAGCTGGCCAGGTCTTTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 90 bp | GGCCTTCCCGTAGTCACAGAATTTGGTTGTACAGTGCAGCACACCTaGAGGTCTCTTTCCAAAGTAGCTGACCAGCTCAAGCTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: GLPVVTEFGCTVQHT*RSLSKVADQLKLLL Trigger: AAGGAGAAGCTTGAGCTGGTCAGCTACTTTGGAAAGAGACCTCCAGGTGTGCTGCACTGTACAACCAAATTCTGTGACTACGGGAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS-3UTR CAA 90 bp | TCTGAGCCCTCTCTAAGCTACCACTGTTTTCCTGTGGCAGTAGCGTTTGTCCCTAGTCACAGAATTTGGTaGTACAGTGCAGCACACCTG | + |
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Preference number: 5 (lower is better) Translates to: SEPSLSYHCFPVAVAFVPSHRIW*YSAAHL Trigger: CAGGTGTGCTGCACTGTACAACCAAATTCTGTGACT...AGGGACAAACGCTACTGCCACAGGAAAACAGTGGTAGCTTAGAGAGGGCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS TCA 72 bp | ACTGGCTGCACGTCGGCCGCACAGCCTAGGGTGACGTaGGCTCGGCTCCCTGGGGGCAGGCCCTCGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TGCTSAAQPRVT*ARLPGGRPSEA Trigger: TGCCTCCGAGGGCCTGCCCCCAGGGAGCCGAGCTCACGTCACCCTAGGCTGTGCGGCCGACGTGCAGCCAGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 72 bp | AGCTCGGCTCCCTGGGGGCAGGCCCTCGGAGGCAGATaGCTTGTCCAGATCACTGGGCCACAACTGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SSAPWGQALGGR*LVQITGPQLQL Trigger: GAGCTGCAGTTGTGGCCCAGTGATCTGGACAAGCCATCTGCCTCCGAGGGCCTGCCCCCAGGGAGCCGAGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CAA 72 bp | CCGCTGCCCGGCAGGCCGCGCAGGATGAATAGCGTCTaGCACTCGTGGAGGGTAGCCACCGTGTCCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: PLPGRPRRMNSV*HSWRVATVSSS Trigger: AGATGAGGACACGGTGGCTACCCTCCACGAGTGCAAGACGCTATTCATCCTGCGCGGCCTGCCGGGCAGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CAA 90 bp | GTGCCGTCGTGGTACTTCTCCAGGATGAGCCGAGCCAGTGTGGACTaGCCGCTGCCCGGCAGGCCGCGCAGGATGAATAGCGTCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: VPSWYFSRMSRASVD*PLPGRPRRMNSVLH Trigger: GTGCAAGACGCTATTCATCCTGCGCGGCCTGCCGGGCAGCGGCAAGTCCACACTGGCTCGGCTCATCCTGGAGAAGTACCACGACGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CAA 72 bp | TGGTACTTCTCCAGGATGAGCCGAGCCAGTGTGGACTaGCCGCTGCCCGGCAGGCCGCGCAGGATGAATAGC | + |
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Preference number: 6 (lower is better) Translates to: WYFSRMSRASVD*PLPGRPRRMNS Trigger: GCTATTCATCCTGCGCGGCCTGCCGGGCAGCGGCAAGTCCACACTGGCTCGGCTCATCCTGGAGAAGTACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS TCA 72 bp | ACACCATCTTGGTGCCGTCGTGGTACTTCTCCAGGATaGGCCGAGCCAGTGTGGACTTGCCGCTGCCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: TPSWCRRGTSPG*AEPVWTCRCPA Trigger: TGCCGGGCAGCGGCAAGTCCACACTGGCTCGGCTCATCCTGGAGAAGTACCACGACGGCACCAAGATGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 72 bp | GCAGGCCCTCGGAGGCAGATGGCTTGTCCAGATCACTaGGCCACAACTGCAGCTCCTGATCGGTCAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: AGPRRQMACPDH*ATTAAPDRSAP Trigger: TGGTGCTGACCGATCAGGAGCTGCAGTTGTGGCCCAGTGATCTGGACAAGCCATCTGCCTCCGAGGGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS TCA 72 bp | CCCGCTCGTGGTTGGTATCATCAAGCACAAGAACCCTaGTGTCCCGGCGGCAGTAGCCAGCCAGGTCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: PARGWYHQAQEP*CPGGSSQPGPR Trigger: ACGAGGACCTGGCTGGCTACTGCCGCCGGGACATCAGGGTTCTTGTGCTTGATGATACCAACCACGAGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 72 bp | TCGGCCGACAGCTGCCATTGGTTCTTCTCCTTGAGCTaGGCACAGTCTAGTCGCCACGCTGTCTTGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SADSCHWFFSLS*AQSSRHAVLGS Trigger: GGAGCCCAAGACAGCGTGGCGACTAGACTGTGCCCAGCTCAAGGAGAAGAACCAATGGCAGCTGTCGGCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CAA 90 bp | AGCTTCTTCAGGTCATCGGCCGACAGCTGCCATTGGTTCTTCTCCTaGAGCTGGGCACAGTCTAGTCGCCACGCTGTCTTGGGCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SFFRSSADSCHWFFS*SWAQSSRHAVLGST Trigger: GGTGGAGCCCAAGACAGCGTGGCGACTAGACTGTGCCCAGCTCAAGGAGAAGAACCAATGGCAGCTGTCGGCCGATGACCTGAAGAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS GCA 72 bp | GGGCTCCACCAGCACCACCTGGTACTGATACTGGTCTaGCATTTCAAAAAGCTGATCCAGCCGCTCCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: GLHQHHLVLILV*HFKKLIQPLPL Trigger: GAGCGGGAGCGGCTGGATCAGCTTTTTGAAATGGCAGACCAGTATCAGTACCAGGTGGTGCTGGTGGAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS GCA 72 bp | CCGGGCTTCAGCTTCTTCAGGTCATCGGCCGACAGCTaGCATTGGTTCTTCTCCTTGAGCTGGGCACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PGFSFFRSSADS*HWFFSLSWAQS Trigger: AGACTGTGCCCAGCTCAAGGAGAAGAACCAATGGCAGCTGTCGGCCGATGACCTGAAGAAGCTGAAGCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CAA 90 bp | GCCCCAGCTGTCTTGGGTGTCACAAAGAGAGCAGAGATGGACAGTTaGAAGGCCTTGCCATACGATCTCTTCACCACCTCCTGCTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: APAVLGVTKRAEMDS*KALPYDLFTTSCWA Trigger: CGCCCAGCAGGAGGTGGTGAAGAGATCGTATGGCAAGGCCTTCAAACTGTCCATCTCTGCTCTCTTTGTGACACCCAAGACAGCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS TCA 72 bp | TGTACGCCTCGGAGAAGTCTGCCCGAGAGCCAGGGATaGTCTTGTAAGCATCAGCGGACACCATCTTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: CTPRRSLPESQG*SCKHQRTPSWC Trigger: GCACCAAGATGGTGTCCGCTGATGCTTACAAGATCATCCCTGGCTCTCGGGCAGACTTCTCCGAGGCGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS GCA 72 bp | ACCTGTTGTAAAATATCTAAGAGGTCAAGACCCGTCTaGACTGGCTGCACGTCGGCCGCACAGCCTAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: TCCKISKRSRPV*TGCTSAAQPRV Trigger: CACCCTAGGCTGTGCGGCCGACGTGCAGCCAGTGCAGACGGGTCTTGACCTCTTAGATATTTTACAACAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 72 bp | CTTCTGCCCCAGCGGCCTTCCCGTAGTCACAGAATTTaGTTGTACAGTGCAGCACACCTGGAGGTCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LLPQRPSRSHRI*LYSAAHLEVSF Trigger: GAAAGAGACCTCCAGGTGTGCTGCACTGTACAACCAAATTCTGTGACTACGGGAAGGCCGCTGGGGCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CAA 72 bp | CTGCCCCAGCGGCCTTCCCGTAGTCACAGAATTTGGTaGTACAGTGCAGCACACCTGGAGGTCTCTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LPQRPSRSHRIW*YSAAHLEVSFQ Trigger: TTGGAAAGAGACCTCCAGGTGTGCTGCACTGTACAACCAAATTCTGTGACTACGGGAAGGCCGCTGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CAA 72 bp | GTCACAAAGAGAGCAGAGATGGACAGTTTGAAGGCCTaGCCATACGATCTCTTCACCACCTCCTGCTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: VTKRAEMDSLKA*PYDLFTTSCWA Trigger: CGCCCAGCAGGAGGTGGTGAAGAGATCGTATGGCAAGGCCTTCAAACTGTCCATCTCTGCTCTCTTTGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS TCA 72 bp | AGTGCAGCACACCTGGAGGTCTCTTTCCAAAGTAGCTaGCCAGCTCAAGCTTCTCCTTGGGTTCATCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SAAHLEVSFQSS*PAQASPWVHLQ Trigger: CTGGAGATGAACCCAAGGAGAAGCTTGAGCTGGTCAGCTACTTTGGAAAGAGACCTCCAGGTGTGCTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CAA 90 bp | GTCTTGGGTGTCACAAAGAGAGCAGAGATGGACAGTTTGAAGGCCTaGCCATACGATCTCTTCACCACCTCCTGCTGGGCGTATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VLGVTKRAEMDSLKA*PYDLFTTSCWAYSS Trigger: AGAAGAATACGCCCAGCAGGAGGTGGTGAAGAGATCGTATGGCAAGGCCTTCAAACTGTCCATCTCTGCTCTCTTTGTGACACCCAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 72 bp | AGAACTCTTTTTGGTCAGGAACCAGCCAAAGTAGAGTaGCAGAAAGTCCTTCTCCAGCCCGGGCTTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RTLFGQEPAKVE*QKVLLQPGLQL Trigger: AAGCTGAAGCCCGGGCTGGAGAAGGACTTTCTGCCACTCTACTTTGGCTGGTTCCTGACCAAAAAGAGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 72 bp | CCTGGCCAGCTTTTCGGAGGGTCTCAGAACTCTTTTTaGTCAGGAACCAGCCAAAGTAGAGTGGCAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: PGQLFGGSQNSF*SGTSQSRVAES Trigger: ACTTTCTGCCACTCTACTTTGGCTGGTTCCTGACCAAAAAGAGTTCTGAGACCCTCCGAAAAGCTGGCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS TCA 72 bp | CTGGCTTCTCCTTTGCTCCTGAGGATGACATTTTCCTaGAGAAGAGCTTGGGCAGGAATGTGTGGCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LASPLLLRMTFS*RRAWAGMCGFC Trigger: GCAAAAGCCACACATTCCTGCCCAAGCTCTTCTTCAGGAAAATGTCATCCTCAGGAGCAAAGGAGAAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS TCA 72 bp | TCTTGGGTGTCACAAAGAGAGCAGAGATGGACAGTTTaGAGGCCTTGCCATACGATCTCTTCACCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SWVSQREQRWTV*RPCHTISSPPP Trigger: AGGAGGTGGTGAAGAGATCGTATGGCAAGGCCTTCAAACTGTCCATCTCTGCTCTCTTTGTGACACCCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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| CDS CCA 72 bp | GTAGTCACAGAATTTGGTTGTACAGTGCAGCACACCTaGAGGTCTCTTTCCAAAGTAGCTGACCAGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: VVTEFGCTVQHT*RSLSKVADQLK Trigger: CTTGAGCTGGTCAGCTACTTTGGAAAGAGACCTCCAGGTGTGCTGCACTGTACAACCAAATTCTGTGACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103120.5 |
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