Pregenerated sensors for CNOT9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026174Ensembl transcript IDs: ENSMUST00000087215.7
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGGGTCATCTTGGGCATGCTGCAAACACAGCATTTGCTGGTGTTaGCACCCGCCTGGGGTTGTGGTAGCAGACTGCTGTCAGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: AGSSWACCKHSICWC*HPPGVVVADCCQEP Trigger: GGGCTCCTGACAGCAGTCTGCTACCACAACCCCAGGCGGGTGTCAACACCAGCAAATGCTGTGTTTGCAGCATGCCCAAGATGACCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR GCA 90 bp | GGGATCCAGGACCTCCAGTCAGCCCACACACCTCAGCGGGTACCTTaGCCCTTTTCTCCAGTACAGTTCAGCACTGAGGTTGTCTATTCC | + |
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Preference number: 1 (lower is better) Translates to: GIQDLQSAHTPQRVP*PFSPVQFSTEVVYS Trigger: GGAATAGACAACCTCAGTGCTGAACTGTACTGGAGAAAAGGGGCAAGGTACCCGCTGAGGTGTGTGGGCTGACTGGAGGTCCTGGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CCA 90 bp | TTGGGCATGCTGCAAACACAGCATTTGCTGGTGTTGACACCCGCCTaGGGTTGTGGTAGCAGACTGCTGTCAGGAGCCCAATTCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LGMLQTQHLLVLTPA*GCGSRLLSGAQFLG Trigger: TCCCAGGAATTGGGCTCCTGACAGCAGTCTGCTACCACAACCCCAGGCGGGTGTCAACACCAGCAAATGCTGTGTTTGCAGCATGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR GCA 90 bp | AGCCACATGGCTTGGTCCCCGGTGCTCTCATGCCTAGAGTGTTGCTaGCATTACCACGTTCTCTCCTCTCTCTACCAGTGGCTAGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: SHMAWSPVLSCLECC*HYHVLSSLYQWLGR Trigger: TCTACCTAGCCACTGGTAGAGAGAGGAGAGAACGTGGTAATGGCAGCAACACTCTAGGCATGAGAGCACCGGGGACCAAGCCATGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR GCA 90 bp | AAAAGCCACATGGCTTGGTCCCCGGTGCTCTCATGCCTAGAGTGTTaGTGCCATTACCACGTTCTCTCCTCTCTCTACCAGTGGCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: KSHMAWSPVLSCLEC*CHYHVLSSLYQWLG Trigger: ACCTAGCCACTGGTAGAGAGAGGAGAGAACGTGGTAATGGCAGCAACACTCTAGGCATGAGAGCACCGGGGACCAAGCCATGTGGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CCA 90 bp | CTAGAGTGTTGCTGCCATTACCACGTTCTCTCCTCTCTCTACCAGTaGCTAGGTAGAGGTTCAGGAGCAGGGTCATCTTGGGCATGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LECCCHYHVLSSLYQ*LGRGSGAGSSWACC Trigger: GCAGCATGCCCAAGATGACCCTGCTCCTGAACCTCTACCTAGCCACTGGTAGAGAGAGGAGAGAACGTGGTAATGGCAGCAACACTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR GCA 90 bp | ACCCAACAGCCTGATGCAGCTATCGGTCTGTCAGAGGGGATGCAATaGCCAGACCAACTTTTTATTGAGCTTATGCAGCTAACAGACTTG | + |
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Preference number: 1 (lower is better) Translates to: TQQPDAAIGLSEGMQ*PDQLFIELMQLTDL Trigger: CAAGTCTGTTAGCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAGACCGATAGCTGCATCAGGCTGTTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CCA 90 bp | GGCTTTAAAGACAGAAGCCAACGAACAATGAAAGAGCCCTTGGGTTaGCACAACTGCCTCTGCAAAGGTTTCTATGACCATCTGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: GFKDRSQRTMKEPLG*HNCLCKGFYDHLSL Trigger: AAGGGACAGATGGTCATAGAAACCTTTGCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTCTTTAAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR GCA 90 bp | AGCCAACGAACAATGAAAGAGCCCTTGGGTTGGCACAACTGCCTCTaGAAAGGTTTCTATGACCATCTGTCCCTTTATAACCTCTTCAAA | + |
|
Preference number: 1 (lower is better) Translates to: SQRTMKEPLGWHNCL*KGFYDHLSLYNLFK Trigger: TTTGAAGAGGTTATAAAGGGACAGATGGTCATAGAAACCTTTGCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CAA 90 bp | AGCAGGGTCATCTTGGGCATGCTGCAAACACAGCATTTGCTGGTGTaGACACCCGCCTGGGGTTGTGGTAGCAGACTGCTGTCAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SRVILGMLQTQHLLV*TPAWGCGSRLLSGA Trigger: GGCTCCTGACAGCAGTCTGCTACCACAACCCCAGGCGGGTGTCAACACCAGCAAATGCTGTGTTTGCAGCATGCCCAAGATGACCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CAA 90 bp | AGGTTCAGGAGCAGGGTCATCTTGGGCATGCTGCAAACACAGCATTaGCTGGTGTTGACACCCGCCTGGGGTTGTGGTAGCAGACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RFRSRVILGMLQTQH*LVLTPAWGCGSRLL Trigger: CAGCAGTCTGCTACCACAACCCCAGGCGGGTGTCAACACCAGCAAATGCTGTGTTTGCAGCATGCCCAAGATGACCCTGCTCCTGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CAA 90 bp | GAGCAGGCACAGAGTTCCTGCTTGGCCTTTGGCTTTCCTATTCCCTaGCCTCCCATTCCACCCAACAGCCTGATGCAGCTATCGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: EQAQSSCLAFGFPIP*PPIPPNSLMQLSVC Trigger: ACAGACCGATAGCTGCATCAGGCTGTTGGGTGGAATGGGAGGCAAGGGAATAGGAAAGCCAAAGGCCAAGCAGGAACTCTGTGCCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR CCA 90 bp | GGTAGAGGTTCAGGAGCAGGGTCATCTTGGGCATGCTGCAAACACAGCATTTGCGTGTTGACACCCGCCTaGGGTTGTGGTAGCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: GRGSGAGSSWACCKHSICVLTPA*GCGSRL Trigger: CAGTCTGCTACCACAACCCCAGGCGGGTGTCAACAC...GCAAATGCTGTGTTTGCAGCATGCCCAAGATGACCCTGCTCCTGAACCTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CAA 90 bp | AAAAAGCCACATGGCTTGGTCCCCGGTGCTCTCATGCCTAGAGTGTaGCTGCCATTACCACGTTCTCTCCTCTCTCTACCAGTGGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: KKPHGLVPGALMPRV*LPLPRSLLSLPVAR Trigger: CCTAGCCACTGGTAGAGAGAGGAGAGAACGTGGTAATGGCAGCAACACTCTAGGCATGAGAGCACCGGGGACCAAGCCATGTGGCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR GCA 90 bp | GGTAGAGGTTCAGGAGCAGGGTCATCTTGGGCATGCTGCAAACACAGCATTTGCCCTCAGCGGGTACCTTaGCCCTTTTCTCCAGTACAG | + |
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Preference number: 2 (lower is better) Translates to: GRGSGAGSSWACCKHSICPQRVP*PFSPVQ Trigger: CTGTACTGGAGAAAAGGGGCAAGGTACCCGCTGAGG...GCAAATGCTGTGTTTGCAGCATGCCCAAGATGACCCTGCTCCTGAACCTCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR CCA 90 bp | GACAGAAGCCAACGAACAATGAAAGAGCCCTTGGGTTGGCACAACTGCCTCTGCAAAAGCCACATGGCTTaGTCCCCGGTGCTCTCATGC | + |
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Preference number: 2 (lower is better) Translates to: DRSQRTMKEPLGWHNCLCKSHMA*SPVLSC Trigger: GCATGAGAGCACCGGGGACCAAGCCATGTGGCTTTT...GCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR TCA 90 bp | CCATTCAACTCCTATGTAGGTCCAAGGCCAGCTGAGGATAGATGGGACATGAGTGAAGCCAGAACAAGGTaGGTGTCCTCACAGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PFNSYVGPRPAEDRWDMSEARTR*VSSQQP Trigger: TGGCTGCTGTGAGGACACTCACCTTGTTCTGGCTTC...ACTCATGTCCCATCTATCCTCAGCTGGCCTTGGACCTACATAGGAGTTGAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGCTAAGCATTTGCTGGTGTTaGCACCCGCCTGGGGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LSEGMQCPDQLFIELMQLSICWC*HPPGVV Trigger: CACAACCCCAGGCGGGTGTCAACACCAGCAAATGCT...TAGCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGGCTTGAGGCCAAGTCCTCCTCTTCAATTTGGAAGGCAGGGGAATAAATGCAAAAGGGGAAAGCGCTaGGATGTGGGTAGGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SGLRPSPPLQFGRQGNKCKRGKR*DVGRLA Trigger: TGCTAGCCTACCCACATCTCAGCGCTTTCCCCTTTT...GCATTTATTCCCCTGCCTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGGCTTGAGGCCAAGTCCTCCTCTTCAATTTGGAAGGCAGGGGAATAAATGCAAAAGGAGAGGAGACTaGGCCAGCAGAGTCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SGLRPSPPLQFGRQGNKCKRRGD*ASRVQL Trigger: TAGCTGGACTCTGCTGGCTCAGTCTCCTCTCCTTTT...GCATTTATTCCCCTGCCTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGGTTGTGGTAGCAGACTaGTGTCAGGAGCCCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: GLSEGMQCPDQLFIELMQVVVAD*CQEPNS Trigger: GGAATTGGGCTCCTGACAGCAGTCTGCTACCACAAC...CTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR CCA 90 bp | CCATTCAACTCCTATGTAGGTCCAAGGCCAGCTGAGGATAGATGGGACATGAGTTCCTCTCTCTACCAGTaGCTAGGTAGAGGTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PFNSYVGPRPAEDRWDMSSSLYQ*LGRGSG Trigger: TCCTGAACCTCTACCTAGCCACTGGTAGAGAGAGGA...ACTCATGTCCCATCTATCCTCAGCTGGCCTTGGACCTACATAGGAGTTGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR CCA 90 bp | GACAGAAGCCAACGAACAATGAAAGAGCCCTTGGGTTGGCACAACTGCCTCTGCCACGGGCTGAAGATTTaGACTCTTTCTAGAGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: DRSQRTMKEPLGWHNCLCHGLKI*TLSRVG Trigger: TCCAACTCTAGAAAGAGTCCAAATCTTCAGCCCGTG...GCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR TCA 90 bp | CCATTCAACTCCTATGTAGGTCCAAGGCCAGCTGAGGATAGATGGGACATGAGTAGTACAGTTCAGCACTaGGGTTGTCTATTCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PFNSYVGPRPAEDRWDMSSTVQH*GCLFPA Trigger: TGCTGGGAATAGACAACCTCAGTGCTGAACTGTACT...ACTCATGTCCCATCTATCCTCAGCTGGCCTTGGACCTACATAGGAGTTGAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGGCTTGAGGCCAAGTCCTCCTCTTCAATTTGGAAGGCAGGGGAATAAATGCTCATCTTGGGCATGCTaGAAACACAGCATTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SGLRPSPPLQFGRQGNKCSSWAC*KHSICW Trigger: CCAGCAAATGCTGTGTTTGCAGCATGCCCAAGATGA...GCATTTATTCCCCTGCCTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR GCA 90 bp | GAAGAACTGCGATCCCTCCTGCCCCAATACAATTCTCTTTTAGGGAAGGTTGAGGGGTCATCTTGGGCATaGTGCAAACACAGCATTTGC | + |
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Preference number: 2 (lower is better) Translates to: EELRSLLPQYNSLLGKVEGSSWA*CKHSIC Trigger: GCAAATGCTGTGTTTGCAGCATGCCCAAGATGACCC...CTCAACCTTCCCTAAAAGAGAATTGTATTGGGGCAGGAGGGATCGCAGTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGTGCCTAGAGTGTTGCTaGCATTACCACGTTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GLSEGMQCPDQLFIELMQCLECC*HYHVLS Trigger: GGAGAGAACGTGGTAATGGCAGCAACACTCTAGGCA...CTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR CCA 90 bp | GAAGAACTGCGATCCCTCCTGCCCCAATACAATTCTCTTTTAGGGAAGGTTGAGTTCCTGCTTGGCCTTTaGCTTTCCTATTCCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: EELRSLLPQYNSLLGKVEFLLGL*LSYSLA Trigger: GGCAAGGGAATAGGAAAGCCAAAGGCCAAGCAGGAA...CTCAACCTTCCCTAAAAGAGAATTGTATTGGGGCAGGAGGGATCGCAGTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR GCA 90 bp | CCATTCAACTCCTATGTAGGTCCAAGGCCAGCTGAGGATAGATGGGACATGAGTTCAGAGGGGATGCAATaGCCAGACCAACTTTTTATT | + |
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Preference number: 2 (lower is better) Translates to: PFNSYVGPRPAEDRWDMSSEGMQ*PDQLFI Trigger: AATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGA...ACTCATGTCCCATCTATCCTCAGCTGGCCTTGGACCTACATAGGAGTTGAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR CCA 90 bp | AGACACGGGCTGAAGATTTGGACTCTTTCTAGAGTTGGATTAATAATCCCATCTGGAGCAGGGTCATCTTaGGCATGCTGCAAACACAGC | + |
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Preference number: 2 (lower is better) Translates to: RHGLKIWTLSRVGLIIPSGAGSS*ACCKHS Trigger: GCTGTGTTTGCAGCATGCCCAAGATGACCCTGCTCC...AGATGGGATTATTAATCCAACTCTAGAAAGAGTCCAAATCTTCAGCCCGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGCTTACTCCGTTTGAGAAGACACCTGGAAATTATCTTCGAAGACCTGAAAACTGCGATCCCTCCTaGCCCAATACAATTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: QALTPFEKTPGNYLRRPENCDPS*PNTILF Trigger: AAAGAGAATTGTATTGGGGCAGGAGGGATCGCAGTT...TTCAGGTCTTCGAAGATAATTTCCAGGTGTCTTCTCAAACGGAGTAAGCGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR TCA 90 bp | CCATTCAACTCCTATGTAGGTCCAAGGCCAGCTGAGGATAGATGGGACATGAGTAGACCAACTTTTTATTaGGCTTATGCAGCTAACAGA | + |
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Preference number: 2 (lower is better) Translates to: PFNSYVGPRPAEDRWDMSRPTFY*AYAANR Trigger: TCTGTTAGCTGCATAAGCTCAATAAAAAGTTGGTCT...ACTCATGTCCCATCTATCCTCAGCTGGCCTTGGACCTACATAGGAGTTGAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGCTTACTCCGTTTGAGAAGACACCTGGAAATTATCTTCGAAGACCTGAACAGACTTGTAAACAGTaGCAACTGACAAAGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: QALTPFEKTPGNYLRRPEQTCKQ*QLTKFC Trigger: GCAAAACTTTGTCAGTTGGCACTGTTTACAAGTCTG...TTCAGGTCTTCGAAGATAATTTCCAGGTGTCTTCTCAAACGGAGTAAGCGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CAA 90 bp | CAAGACATTTATCAAGGTGATGCTGTTCTTTGCTTTCTGAGACTTTaGTTCTTCAGGCTTGAGGCCAAGTCCTCCTCTTCAATTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QDIYQGDAVLCFLRL*FFRLEAKSSSSIWK Trigger: CTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGAAGAACAAAAGTCTCAGAAAGCAAAGAACAGCATCACCTTGATAAATGTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR TCA 90 bp | AGACACGGGCTGAAGATTTGGACTCTTTCTAGAGTTGGATTAATAATCCCATCTCTGACAAAGTTTTGCTaGGAACTACAGCTTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RHGLKIWTLSRVGLIIPSLTKFC*ELQLVS Trigger: GGACACAAGCTGTAGTTCTCAGCAAAACTTTGTCAG...AGATGGGATTATTAATCCAACTCTAGAAAGAGTCCAAATCTTCAGCCCGTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGCAGAGTCCAGCTATTCATTTTAAATCTGAAGAAACTCATTCAGCTGCTGTAAACAGTGCCAACTaGCAAAGTTTTGCTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SQQSPAIHFKSEETHSAAVNSAN*QSFAEN Trigger: GTTCTCAGCAAAACTTTGTCAGTTGGCACTGTTTAC...AGCAGCTGAATGAGTTTCTTCAGATTTAAAATGAATAGCTGGACTCTGCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAGTCCAGCTATTCATTTTAAATCTGAAGAAACTCATTCAGCTGCTTCTACCCAGCAATAAAACCTaGGCTGTTTTCCTCATAGGT | + |
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Preference number: 2 (lower is better) Translates to: SRVQLFILNLKKLIQLLLPSNKT*AVFLIG Trigger: ACCTATGAGGAAAACAGCTCAGGTTTTATTGCTGGG...TAGAAGCAGCTGAATGAGTTTCTTCAGATTTAAAATGAATAGCTGGACTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR GCA 90 bp | AGACACGGGCTGAAGATTTGGACTCTTTCTAGAGTTGGATTAATAATCCCATCTAGAAACTCATTCAGCTaGTTCTACAATCATGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RHGLKIWTLSRVGLIIPSRNSFS*FYNHEE Trigger: CTCCTCATGATTGTAGAAGCAGCTGAATGAGTTTCT...AGATGGGATTATTAATCCAACTCTAGAAAGAGTCCAAATCTTCAGCCCGTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR GCA 72 bp | GACCTCCAGTCAGCCCACACACCTCAGCGGGTACCTTaGCCCTTTTCTCCAGTACAGTTCAGCACTGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: DLQSAHTPQRVP*PFSPVQFSTEV Trigger: AACCTCAGTGCTGAACTGTACTGGAGAAAAGGGGCAAGGTACCCGCTGAGGTGTGTGGGCTGACTGGAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR GCA 72 bp | GCTTGGTCCCCGGTGCTCTCATGCCTAGAGTGTTGCTaGCATTACCACGTTCTCTCCTCTCTCTACCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: AWSPVLSCLECC*HYHVLSSLYQW Trigger: CCACTGGTAGAGAGAGGAGAGAACGTGGTAATGGCAGCAACACTCTAGGCATGAGAGCACCGGGGACCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CCA 72 bp | CTGCAAACACAGCATTTGCTGGTGTTGACACCCGCCTaGGGTTGTGGTAGCAGACTGCTGTCAGGAGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LQTQHLLVLTPA*GCGSRLLSGAQ Trigger: TTGGGCTCCTGACAGCAGTCTGCTACCACAACCCCAGGCGGGTGTCAACACCAGCAAATGCTGTGTTTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR TCA 72 bp | TCTTGGGCATGCTGCAAACACAGCATTTGCTGGTGTTaGCACCCGCCTGGGGTTGTGGTAGCAGACTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: SWACCKHSICWC*HPPGVVVADCC Trigger: ACAGCAGTCTGCTACCACAACCCCAGGCGGGTGTCAACACCAGCAAATGCTGTGTTTGCAGCATGCCCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR TCA 72 bp | GATGTGGGTAGGCTAGCAGCTGAAGCCAGAACAAGGTaGGTGTCCTCACAGCAGCCAGGTATGGGAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: DVGRLAAEARTR*VSSQQPGMGGK Trigger: TTTCCCTCCCATACCTGGCTGCTGTGAGGACACTCACCTTGTTCTGGCTTCAGCTGCTAGCCTACCCACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR GCA 72 bp | ATGGCTTGGTCCCCGGTGCTCTCATGCCTAGAGTGTTaGTGCCATTACCACGTTCTCTCCTCTCTCTACCAG | + |
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Preference number: 3 (lower is better) Translates to: MAWSPVLSCLEC*CHYHVLSSLYQ Trigger: CTGGTAGAGAGAGGAGAGAACGTGGTAATGGCAGCAACACTCTAGGCATGAGAGCACCGGGGACCAAGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR CCA 72 bp | TGCTGCCATTACCACGTTCTCTCCTCTCTCTACCAGTaGCTAGGTAGAGGTTCAGGAGCAGGGTCATCTTGG | + |
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Preference number: 3 (lower is better) Translates to: CCHYHVLSSLYQ*LGRGSGAGSSW Trigger: CCAAGATGACCCTGCTCCTGAACCTCTACCTAGCCACTGGTAGAGAGAGGAGAGAACGTGGTAATGGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR TCA 72 bp | GCCCCAAGCCTCAGCTGCTCCCCCAGTGAAGTGGAATaGAAGACTTCAGCTCAGCAGGAAGGCATATTTCAA | + |
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Preference number: 3 (lower is better) Translates to: APSLSCSPSEVE*KTSAQQEGIFQ Trigger: TTGAAATATGCCTTCCTGCTGAGCTGAAGTCTTTCATTCCACTTCACTGGGGGAGCAGCTGAGGCTTGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR CAA 90 bp | CCATTCAACTCCTATGTAGGTCCAAGGCCAGCTGAGGATAGATGGGACATGAGTAAAAAGCCACATGGCTaGGTCCCCGGTGCTCTCATG | + |
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Preference number: 3 (lower is better) Translates to: PFNSYVGPRPAEDRWDMSKKPHG*VPGALM Trigger: CATGAGAGCACCGGGGACCAAGCCATGTGGCTTTTT...ACTCATGTCCCATCTATCCTCAGCTGGCCTTGGACCTACATAGGAGTTGAATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| 3UTR-3UTR CAA 90 bp | TTTTGTTCTTCAGGCTTGAGGCCAAGTCCTCCTCTTCAATTTGGAAGGCAGGGGGGCTTTCCTATTCCCTaGCCTCCCATTCCACCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: FCSSGLRPSPPLQFGRQGGFPIP*PPIPPN Trigger: GTTGGGTGGAATGGGAGGCAAGGGAATAGGAAAGCC...CCCCTGCCTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGAAGAACAAAA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGTTCTTCAGGCTTGAGGCCAAGTCCTCCTCTTCAATTTGGAAGGCAGGGGGAAAGAGCCCTTGGGTaGGCACAACTGCCTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FCSSGLRPSPPLQFGRQGERALG*AQLPLQ Trigger: TTGCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTC...CCCCTGCCTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGAAGAACAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR-3UTR CAA 90 bp | CCATTCAACTCCTATGTAGGTCCAAGGCCAGCTGAGGATAGATGGGACATGAGTTTTTGTTCTTCAGGCTaGAGGCCAAGTCCTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PFNSYVGPRPAEDRWDMSFCSSG*RPSPPL Trigger: AAGAGGAGGACTTGGCCTCAAGCCTGAAGAACAAAA...ACTCATGTCCCATCTATCCTCAGCTGGCCTTGGACCTACATAGGAGTTGAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR TCA 72 bp | ATCCCATCTTTGGAGGTGAGGATGAGAAACAAAGGCTaGCGGTGGGAAGGATCGCAGTTTACAGTAACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: IPSLEVRMRNKG*RWEGSQFTVTG Trigger: ACCTGTTACTGTAAACTGCGATCCTTCCCACCGTCAGCCTTTGTTTCTCATCCTCACCTCCAAAGATGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR GCA 72 bp | CCTGATGCAGCTATCGGTCTGTCAGAGGGGATGCAATaGCCAGACCAACTTTTTATTGAGCTTATGCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PDAAIGLSEGMQ*PDQLFIELMQL Trigger: TAGCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAGACCGATAGCTGCATCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR CCA 72 bp | GACAGAAGCCAACGAACAATGAAAGAGCCCTTGGGTTaGCACAACTGCCTCTGCAAAGGTTTCTATGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: DRSQRTMKEPLG*HNCLCKGFYDH Trigger: ATGGTCATAGAAACCTTTGCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR-3UTR CAA 90 bp | AGACACGGGCTGAAGATTTGGACTCTTTCTAGAGTTGGATTAATAATCCCATCTCAGCATTTGCTGGTGTaGACACCCGCCTGGGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RHGLKIWTLSRVGLIIPSQHLLV*TPAWGC Trigger: ACAACCCCAGGCGGGTGTCAACACCAGCAAATGCTG...AGATGGGATTATTAATCCAACTCTAGAAAGAGTCCAAATCTTCAGCCCGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAAGACAGAAGCCAACGAACAATGAAAGAGCCCTTGGGTTGGCACAACTGCGCACAGAGTTCCTGCTaGGCCTTTGGCTTTCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: FKDRSQRTMKEPLGWHNCAQSSC*AFGFPI Trigger: AATAGGAAAGCCAAAGGCCAAGCAGGAACTCTGTGC...GCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTCTTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR TCA 72 bp | TGTTCTTTGCTTTCTGAGACTTTTGTTCTTCAGGCTTaGGGCCAAGTCCTCCTCTTCAATTTGGAAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CSLLSETFVLQA*GQVLLFNLEGR Trigger: CCTGCCTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGAAGAACAAAAGTCTCAGAAAGCAAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR GCA 72 bp | ACAATGAAAGAGCCCTTGGGTTGGCACAACTGCCTCTaGAAAGGTTTCTATGACCATCTGTCCCTTTATAAC | + |
|
Preference number: 3 (lower is better) Translates to: TMKEPLGWHNCL*KGFYDHLSLYN Trigger: GTTATAAAGGGACAGATGGTCATAGAAACCTTTGCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTCATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAGTCCAGCTATTCATTTTAAATCTGAAGAAACTCATTCAGCTGCTTCTAACCTCAGCGGGTACCTaGCCCCTTTTCTCCAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: SRVQLFILNLKKLIQLLLTSAGT*PLFSST Trigger: TGTACTGGAGAAAAGGGGCAAGGTACCCGCTGAGGT...TAGAAGCAGCTGAATGAGTTTCTTCAGATTTAAAATGAATAGCTGGACTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAGTCCAGCTATTCATTTTAAATCTGAAGAAACTCATTCAGCTGCTTCTACTGCAAACACAGCATTaGCTGGTGTTGACACCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: SRVQLFILNLKKLIQLLLLQTQH*LVLTPA Trigger: GGCGGGTGTCAACACCAGCAAATGCTGTGTTTGCAG...TAGAAGCAGCTGAATGAGTTTCTTCAGATTTAAAATGAATAGCTGGACTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR GCA 72 bp | CTGAGTCAAGACATTTATCAAGGTGATGCTGTTCTTTaGTTTCTGAGACTTTTGTTCTTCAGGCTTGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSQDIYQGDAVL*FLRLLFFRLEA Trigger: GGCCTCAAGCCTGAAGAACAAAAGTCTCAGAAAGCAAAGAACAGCATCACCTTGATAAATGTCTTGACTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAGTCCAGCTATTCATTTTAAATCTGAAGAAACTCATTCAGCTGCTTCTACTCATGCCTAGAGTGTaGCTGCCATTACCACGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SRVQLFILNLKKLIQLLLLMPRV*LPLPRS Trigger: AGAACGTGGTAATGGCAGCAACACTCTAGGCATGAG...TAGAAGCAGCTGAATGAGTTTCTTCAGATTTAAAATGAATAGCTGGACTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR TCA 72 bp | CACAAGCCGCAGACTGAGTCAAGACATTTATCAAGGTaGTGCTGTTCTTTGCTTTCTGAGACTTTTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HKPQTESRHLSR*CCSLLSETFVL Trigger: AAGAACAAAAGTCTCAGAAAGCAAAGAACAGCATCACCTTGATAAATGTCTTGACTCAGTCTGCGGCTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR TCA 72 bp | TACCCTAGAGAACTTTTCAGATCACAAGCCGCAGACTaGGTCAAGACATTTATCAAGGTGATGCTGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: YPRELFRSQAAD*VKTFIKVMLFF Trigger: AAAGAACAGCATCACCTTGATAAATGTCTTGACTCAGTCTGCGGCTTGTGATCTGAAAAGTTCTCTAGGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR-3UTR CAA 90 bp | AGACACGGGCTGAAGATTTGGACTCTTTCTAGAGTTGGATTAATAATCCCATCTAGTTCAGCACTGAGGTaGTCTATTCCCAGCAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: RHGLKIWTLSRVGLIIPSSSALR*SIPSNK Trigger: TTTATTGCTGGGAATAGACAACCTCAGTGCTGAACT...AGATGGGATTATTAATCCAACTCTAGAAAGAGTCCAAATCTTCAGCCCGTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR TCA 72 bp | CAGACTTGTAAACAGTGCCAACTGACAAAGTTTTGCTaGGAACTACAGCTTGTGTCCATTAAACACATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QTCKQCQLTKFC*ELQLVSIKHIS Trigger: AGAGATGTGTTTAATGGACACAAGCTGTAGTTCTCAGCAAAACTTTGTCAGTTGGCACTGTTTACAAGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR TCA 72 bp | AATCTGAAGAAACTCATTCAGCTGCTTCTACAATCATaGGGAGATGGCACTATGAAAACTCACGCTAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NLKKLIQLLLQS*GDGTMKTHARE Trigger: TTCTCTAGCGTGAGTTTTCATAGTGCCATCTCCTCATGATTGTAGAAGCAGCTGAATGAGTTTCTTCAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCGGGTACCTTGCCCCTTTTCTCCAGTACAGTTCAGCACTGAGGTTGTCTCCCCCGGGGATCGGTaGCCTGGCCCTCTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQRVPCPFSPVQFSTEVVSPGDR*PGPLAG Trigger: ACCTGCAAGAGGGCCAGGTCACCGATCCCCGGGGGA...GACAACCTCAGTGCTGAACTGTACTGGAGAAAAGGGGCAAGGTACCCGCTGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCGGGTACCTTGCCCCTTTTCTCCAGTACAGTTCAGCACTGAGGTTGTCCAGGGAGGCACTGTCTaGGTGCTTCACGTGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQRVPCPFSPVQFSTEVVQGGTV*VLHVPW Trigger: CCAGGGCACGTGAAGCACTCAGACAGTGCCTCCCTG...GACAACCTCAGTGCTGAACTGTACTGGAGAAAAGGGGCAAGGTACCCGCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGGTTCAGGAGCAGGGTCATCTTGGGCATGCTGCAAACACAGCATTTGCAGTAGGCACAGGCGCTaGCGTTGCCAGGCTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRGSGAGSSWACCKHSICSRHRR*RCQAVH Trigger: ATGCACAGCCTGGCAACGGCAGCGCCTGTGCCTACT...GCAAATGCTGTGTTTGCAGCATGCCCAAGATGACCCTGCTCCTGAACCTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR CAA 72 bp | AGCAGGGTCATCTTGGGCATGCTGCAAACACAGCATTaGCTGGTGTTGACACCCGCCTGGGGTTGTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRVILGMLQTQH*LVLTPAWGCGS Trigger: GCTACCACAACCCCAGGCGGGTGTCAACACCAGCAAATGCTGTGTTTGCAGCATGCCCAAGATGACCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR CAA 72 bp | ATCTTGGGCATGCTGCAAACACAGCATTTGCTGGTGTaGACACCCGCCTGGGGTTGTGGTAGCAGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGMLQTQHLLV*TPAWGCGSRLL Trigger: CAGCAGTCTGCTACCACAACCCCAGGCGGGTGTCAACACCAGCAAATGCTGTGTTTGCAGCATGCCCAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR CAA 72 bp | CATGGCTTGGTCCCCGGTGCTCTCATGCCTAGAGTGTaGCTGCCATTACCACGTTCTCTCCTCTCTCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: HGLVPGALMPRV*LPLPRSLLSLP Trigger: TGGTAGAGAGAGGAGAGAACGTGGTAATGGCAGCAACACTCTAGGCATGAGAGCACCGGGGACCAAGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR TCA 90 bp | GTCTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGCCCTGGTCTCCGGGTGTaGGGCCACACACTGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VCQRGCNAQTNFLLSLCSPGLRV*GHTLQQ Trigger: TTGCTGCAGTGTGTGGCCTCACACCCGGAGACCAGG...GCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCGGGTACCTTGCCCCTTTTCTCCAGTACAGTTCAGCACTGAGGTTGTCGTGACCTGGCCCTCTTaGAGGTTCTTCACCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQRVPCPFSPVQFSTEVVVTWPS*RFFTSC Trigger: ACAACTGGTGAAGAACCTGCAAGAGGGCCAGGTCAC...GACAACCTCAGTGCTGAACTGTACTGGAGAAAAGGGGCAAGGTACCCGCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | GAAGAACTGCGATCCCTCCTGCCCCAATACAATTCTCTTTTAGGGAAGGTTGAGCGGGGATCGGTGACCTaGCCCTCTTGCAGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EELRSLLPQYNSLLGKVERGSVT*PSCRFF Trigger: GAAGAACCTGCAAGAGGGCCAGGTCACCGATCCCCG...CTCAACCTTCCCTAAAAGAGAATTGTATTGGGGCAGGAGGGATCGCAGTTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCGGGTACCTTGCCCCTTTTCTCCAGTACAGTTCAGCACTGAGGTTGTCTGCCCTGGGATTATCTaGGAGTCGAAGGTAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: PQRVPCPFSPVQFSTEVVCPGII*ESKVTS Trigger: AGATGTTACCTTCGACTCTCAGATAATCCCAGGGCA...GACAACCTCAGTGCTGAACTGTACTGGAGAAAAGGGGCAAGGTACCCGCTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | GACAGAAGCCAACGAACAATGAAAGAGCCCTTGGGTTGGCACAACTGCCTCTGCCAAACTCTGTTAGACTaGTGTGCTGTCAAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DRSQRTMKEPLGWHNCLCQTLLD*CAVKVG Trigger: CCCAACCTTGACAGCACACCAGTCTAACAGAGTTTG...GCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR GCA 90 bp | CCATTCAACTCCTATGTAGGTCCAAGGCCAGCTGAGGATAGATGGGACATGAGTGTTCTTCACCAGTTGTaGAAGCCAGCGTTTCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFNSYVGPRPAEDRWDMSVLHQL*KPAFRG Trigger: ACCACGAAACGCTGGCTTGCACAACTGGTGAAGAAC...ACTCATGTCCCATCTATCCTCAGCTGGCCTTGGACCTACATAGGAGTTGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTTGAGGCCAAGTCCTCCTCTTCAATTTGGAAGGCAGGGGAATAAATGCATGAATGCCATAGCATaGGTGCAAGGTCAGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLRPSPPLQFGRQGNKCMNAIA*VQGQGQ Trigger: CTGTCCCTGACCTTGCACCCATGCTATGGCATTCAT...GCATTTATTCCCCTGCCTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGCTAGTTGTGTCCTTCAGCTaGTCAGGGAGGCACTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSEGMQCPDQLFIELMQLVVSFS*SGRHCL Trigger: CAGACAGTGCCTCCCTGACCAGCTGAAGGACACAAC...TAGCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | GTCTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGCTTCTCTCTGTCCACTTaGGCTAGTGCAGTAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VCQRGCNAQTNFLLSLCSFSLST*ASAVGT Trigger: TGTGCCTACTGCACTAGCCCAAGTGGACAGAGAGAA...GCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | TTTAAAGACAGAAGCCAACGAACAATGAAAGAGCCCTTGGGTTGGCACAACTGCGCCAGCGTTTCGTGGTaGTGTCGTCTTTTAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FKDRSQRTMKEPLGWHNCASVSW*CRLLAP Trigger: AGGTGCTAAAAGACGACACCACCACGAAACGCTGGC...GCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTCTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | AGACACGGGCTGAAGATTTGGACTCTTTCTAGAGTTGGATTAATAATCCCATCTCCAGAAAAGCTGACCTaGTCTCCGGGTGTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHGLKIWTLSRVGLIIPSPEKLT*SPGVRP Trigger: TGGCCTCACACCCGGAGACCAGGTCAGCTTTTCTGG...AGATGGGATTATTAATCCAACTCTAGAAAGAGTCCAAATCTTCAGCCCGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCGCTTACTCCGTTTGAGAAGACACCTGGAAATTATCTTCGAAGACCTGAAGGGCTGACGGTTCTTTaGATAGCTGCAGGACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QALTPFEKTPGNYLRRPEGLTVL*IAAGPF Trigger: AAATGGTCCTGCAGCTATCCAAAGAACCGTCAGCCC...TTCAGGTCTTCGAAGATAATTTCCAGGTGTCTTCTCAAACGGAGTAAGCGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGCTAGTGTGCTGTCAAGGTTaGGGGGTTGATAGATGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LSEGMQCPDQLFIELMQLVCCQG*GVDRWI Trigger: TATCCATCTATCAACCCCCCAACCTTGACAGCACAC...TAGCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGCTAGGGGTACAAAAAGAGTaGGATGTGTGCTGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSEGMQCPDQLFIELMQLGVQKE*DVCCQK Trigger: TTTCTGGCAGCACACATCCCACTCTTTTTGTACCCC...TAGCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR GCA 90 bp | GAAGAACTGCGATCCCTCCTGCCCCAATACAATTCTCTTTTAGGGAAGGTTGAGATAGTACCAAATGAATaGCATAGCATGGGTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EELRSLLPQYNSLLGKVEIVPNE*HSMGAR Trigger: CCTTGCACCCATGCTATGGCATTCATTTGGTACTAT...CTCAACCTTCCCTAAAAGAGAATTGTATTGGGGCAGGAGGGATCGCAGTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCGCTTACTCCGTTTGAGAAGACACCTGGAAATTATCTTCGAAGACCTGAAGGTTCTTTGGATAGCTaGAGGACCATTTTACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QALTPFEKTPGNYLRRPEGSLDS*RTILPK Trigger: CTTGGGTAAAATGGTCCTGCAGCTATCCAAAGAACC...TTCAGGTCTTCGAAGATAATTTCCAGGTGTCTTCTCAAACGGAGTAAGCGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGCTATCCAAGAGGATCTTCTaGAGTATGAATGTGGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LSEGMQCPDQLFIELMQLSKRIF*SMNVAT Trigger: GGTTGCCACATTCATACTCCAGAAGATCCTCTTGGA...TAGCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | TTTTGTTCTTCAGGCTTGAGGCCAAGTCCTCCTCTTCAATTTGGAAGGCAGGGGAAGATCATGGCAACATaGGAAAAACGCTCATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCSSGLRPSPPLQFGRQGKIMAT*EKRSYV Trigger: GACATATGAGCGTTTTTCCCATGTTGCCATGATCTT...CCCCTGCCTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGAAGAACAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGTCCAGCTATTCATTTTAAATCTGAAGAAACTCATTCAGCTGCTTCTAGAGGCACTGTCTGAGTaGTTCACGTGCCCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SRVQLFILNLKKLIQLLLEALSE*FTCPGI Trigger: AATCCCAGGGCACGTGAAGCACTCAGACAGTGCCTC...TAGAAGCAGCTGAATGAGTTTCTTCAGATTTAAAATGAATAGCTGGACTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR CCA 90 bp | TACTACTTTCTTGGCTTTAAAGACAGAAGCCAACGAACAATGAAAGAGCCCTTGCAAGCCAGCGTTTCGTaGTGGTGTCGTCTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YYFLGFKDRSQRTMKEPLQASVS*WCRLLA Trigger: TGCTAAAAGACGACACCACCACGAAACGCTGGCTTG...CAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTCTTTAAAGCCAAGAAAGTAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR CAA 72 bp | TTTAAAGACAGAAGCCAACGAACAATGAAAGAGCCCTaGGGTTGGCACAACTGCCTCTGCAAAGGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FKDRSQRTMKEP*GWHNCLCKGFY Trigger: ATAGAAACCTTTGCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTCTTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| 3UTR CAA 72 bp | AGAAGACACCTGGAAATTATCTTCGAAGACCTGAATTaGAAGAACTGCGATCCCTCCTGCCCCAATACAATT | + |
|
Preference number: 4 (lower is better) Translates to: RRHLEIIFEDLN*KNCDPSCPNTI Trigger: AATTGTATTGGGGCAGGAGGGATCGCAGTTCTTCAAATTCAGGTCTTCGAAGATAATTTCCAGGTGTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGTCCAGCTATTCATTTTAAATCTGAAGAAACTCATTCAGCTGCTTCTACAGACTCTCTCTTCTTaGTCAGCTCCAACAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRVQLFILNLKKLIQLLLQTLSS*SAPTKH Trigger: ATGCTTTGTTGGAGCTGAGCAAGAAGAGAGAGTCTG...TAGAAGCAGCTGAATGAGTTTCTTCAGATTTAAAATGAATAGCTGGACTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CCA 90 bp | AGTTGTGCAAGCCAGCGTTTCGTGGTGGTGTCGTCTTTTAGCACCTaGGCAAAGGTTGTGTCCTTCAGCTGGTCAGGGAGGCACTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SCASQRFVVVSSFST*AKVVSFSWSGRHCL Trigger: CAGACAGTGCCTCCCTGACCAGCTGAAGGACACAACCTTTGCCCAGGTGCTAAAAGACGACACCACCACGAAACGCTGGCTTGCACAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CCA 90 bp | GGCCCTCTTGCAGGTTCTTCACCAGTTGTGCAAGCCAGCGTTTCGTaGTGGTGTCGTCTTTTAGCACCTGGGCAAAGGTTGTGTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GPLAGSSPVVQASVS*WCRLLAPGQRLCPS Trigger: TGAAGGACACAACCTTTGCCCAGGTGCTAAAAGACGACACCACCACGAAACGCTGGCTTGCACAACTGGTGAAGAACCTGCAAGAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS GCA 90 bp | GCTGCCAGAAAAGCTGACCTGGTCTCCGGGTGTGAGGCCACACACTaGAGCAATGCTAAAGCATTGCAAACTCTGTTAGACTGGTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: AARKADLVSGCEATH*SNAKALQTLLDWCA Trigger: AGCACACCAGTCTAACAGAGTTTGCAATGCTTTAGCATTGCTGCAGTGTGTGGCCTCACACCCGGAGACCAGGTCAGCTTTTCTGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CCA 90 bp | CCTCTTGCAGGTTCTTCACCAGTTGTGCAAGCCAGCGTTTCGTGGTaGTGTCGTCTTTTAGCACCTGGGCAAAGGTTGTGTCCTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PLAGSSPVVQASVSW*CRLLAPGQRLCPSA Trigger: AGCTGAAGGACACAACCTTTGCCCAGGTGCTAAAAGACGACACCACCACGAAACGCTGGCTTGCACAACTGGTGAAGAACCTGCAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS-3UTR CAA 90 bp | TCAGGCTTGAGGCCAAGTCCTCCTCTTCAATTTGGAAGGCAGGGGAATAAATGCGCACCTGGGCAAAGGTaGTGTCCTTCAGCTGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: SGLRPSPPLQFGRQGNKCAPGQR*CPSAGQ Trigger: CTGACCAGCTGAAGGACACAACCTTTGCCCAGGTGC...GCATTTATTCCCCTGCCTTCCAAATTGAAGAGGAGGACTTGGCCTCAAGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS-3UTR CAA 90 bp | GAAGAACTGCGATCCCTCCTGCCCCAATACAATTCTCTTTTAGGGAAGGTTGAGCGGGCTGACGGTTCTTaGGATAGCTGCAGGACCATT | + |
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Preference number: 5 (lower is better) Translates to: EELRSLLPQYNSLLGKVERADGS*DSCRTI Trigger: AATGGTCCTGCAGCTATCCAAAGAACCGTCAGCCCG...CTCAACCTTCCCTAAAAGAGAATTGTATTGGGGCAGGAGGGATCGCAGTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CCA 90 bp | GGTAACATCTTACTACGTGCTTCAGCAGACGGGCTGACGGTTCTTTaGATAGCTGCAGGACCATTTTACCCAAGATCATGGCAACATGGG | + |
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Preference number: 5 (lower is better) Translates to: GNILLRASADGLTVL*IAAGPFYPRSWQHG Trigger: CCCATGTTGCCATGATCTTGGGTAAAATGGTCCTGCAGCTATCCAAAGAACCGTCAGCCCGTCTGCTGAAGCACGTAGTAAGATGTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS-3UTR CAA 90 bp | GACAGAAGCCAACGAACAATGAAAGAGCCCTTGGGTTGGCACAACTGCCTCTGCACAAAGCATTTTCCCTaGTCTCAGGACTGGACAGTT | + |
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Preference number: 5 (lower is better) Translates to: DRSQRTMKEPLGWHNCLCTKHFP*SQDWTV Trigger: AACTGTCCAGTCCTGAGACAAGGGAAAATGCTTTGT...GCAGAGGCAGTTGTGCCAACCCAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS-3UTR CAA 90 bp | GTCTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGCCAGGTTCTTCACCAGTaGTGCAAGCCAGCGTTTCGT | + |
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Preference number: 5 (lower is better) Translates to: VCQRGCNAQTNFLLSLCSQVLHQ*CKPAFR Trigger: ACGAAACGCTGGCTTGCACAACTGGTGAAGAACCTG...GCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS TCA 90 bp | GCTCCAACAAAGCATTTTCCCTTGTCTCAGGACTGGACAGTTCATTaGTCCACTGATAGATCTTCTCTCTGTCCACTTGGGCTAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: APTKHFPLSQDWTVH*STDRSSLCPLGLVQ Trigger: CTGCACTAGCCCAAGTGGACAGAGAGAAGATCTATCAGTGGATCAATGAACTGTCCAGTCCTGAGACAAGGGAAAATGCTTTGTTGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS-3UTR CAA 90 bp | GTCTGTCAGAGGGGATGCAATGCCCAGACCAACTTTTTATTGAGCTTATGCAGCACAGACTCTCTCTTCTaGCTCAGCTCCAACAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: VCQRGCNAQTNFLLSLCSTDSLF*LSSNKA Trigger: TGCTTTGTTGGAGCTGAGCAAGAAGAGAGAGTCTGT...GCTGCATAAGCTCAATAAAAAGTTGGTCTGGGCATTGCATCCCCTCTGACAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS-3UTR CAA 90 bp | CCATTCAACTCCTATGTAGGTCCAAGGCCAGCTGAGGATAGATGGGACATGAGTTCAAAGGGACGAGTTTaGCTGACTGTGTGCAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: PFNSYVGPRPAEDRWDMSSKGRV*LTVCKK Trigger: CTTTTTGCACACAGTCAGCAAAACTCGTCCCTTTGA...ACTCATGTCCCATCTATCCTCAGCTGGCCTTGGACCTACATAGGAGTTGAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS-3UTR CAA 90 bp | TACTACTTTCTTGGCTTTAAAGACAGAAGCCAACGAACAATGAAAGAGCCCTTGGGTGACCTGGCCCTCTaGCAGGTTCTTCACCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: YYFLGFKDRSQRTMKEPLGDLAL*QVLHQL Trigger: CAACTGGTGAAGAACCTGCAAGAGGGCCAGGTCACC...CAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTCTTTAAAGCCAAGAAAGTAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS GCA 90 bp | ATATTTACAATTTCCTGTAACAGTGCTGCAATAGTACCAAATGAATaGCATAGCATGGGTGCAAGGTCAGGGACAGACTCTCTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: IFTISCNSAAIVPNE*HSMGARSGTDSLFL Trigger: CAAGAAGAGAGAGTCTGTCCCTGACCTTGCACCCATGCTATGGCATTCATTTGGTACTATTGCAGCACTGTTACAGGAAATTGTAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS-3UTR CAA 90 bp | TACTACTTTCTTGGCTTTAAAGACAGAAGCCAACGAACAATGAAAGAGCCCTTGAGCAATGCTAAAGCATaGCAAACTCTGTTAGACTGG | + |
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Preference number: 5 (lower is better) Translates to: YYFLGFKDRSQRTMKEPLSNAKA*QTLLDW Trigger: CCAGTCTAACAGAGTTTGCAATGCTTTAGCATTGCT...CAAGGGCTCTTTCATTGTTCGTTGGCTTCTGTCTTTAAAGCCAAGAAAGTAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CCA 72 bp | AGCCAGCGTTTCGTGGTGGTGTCGTCTTTTAGCACCTaGGCAAAGGTTGTGTCCTTCAGCTGGTCAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SQRFVVVSSFST*AKVVSFSWSGR Trigger: CCTCCCTGACCAGCTGAAGGACACAACCTTTGCCCAGGTGCTAAAAGACGACACCACCACGAAACGCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS TCA 72 bp | AGGTTGTGTCCTTCAGCTGGTCAGGGAGGCACTGTCTaGGTGCTTCACGTGCCCTGGGATTATCTGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: RLCPSAGQGGTV*VLHVPWDYLRV Trigger: GACTCTCAGATAATCCCAGGGCACGTGAAGCACTCAGACAGTGCCTCCCTGACCAGCTGAAGGACACAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CAA 72 bp | ATCGGTGACCTGGCCCTCTTGCAGGTTCTTCACCAGTaGTGCAAGCCAGCGTTTCGTGGTGGTGTCGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: IGDLALLQVLHQ*CKPAFRGGVVF Trigger: AAAGACGACACCACCACGAAACGCTGGCTTGCACAACTGGTGAAGAACCTGCAAGAGGGCCAGGTCACCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CCA 72 bp | GCAGGTTCTTCACCAGTTGTGCAAGCCAGCGTTTCGTaGTGGTGTCGTCTTTTAGCACCTGGGCAAAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AGSSPVVQASVS*WCRLLAPGQRL Trigger: CAACCTTTGCCCAGGTGCTAAAAGACGACACCACCACGAAACGCTGGCTTGCACAACTGGTGAAGAACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CCA 72 bp | GGTTCTTCACCAGTTGTGCAAGCCAGCGTTTCGTGGTaGTGTCGTCTTTTAGCACCTGGGCAAAGGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: GSSPVVQASVSW*CRLLAPGQRLC Trigger: ACACAACCTTTGCCCAGGTGCTAAAAGACGACACCACCACGAAACGCTGGCTTGCACAACTGGTGAAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CAA 90 bp | GAATGCCATAGCATGGGTGCAAGGTCAGGGACAGACTCTCTCTTCTaGCTCAGCTCCAACAAAGCATTTTCCCTTGTCTCAGGACTGGAC | + |
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Preference number: 6 (lower is better) Translates to: ECHSMGARSGTDSLF*LSSNKAFSLVSGLD Trigger: GTCCAGTCCTGAGACAAGGGAAAATGCTTTGTTGGAGCTGAGCAAGAAGAGAGAGTCTGTCCCTGACCTTGCACCCATGCTATGGCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS GCA 72 bp | AAAGCTGACCTGGTCTCCGGGTGTGAGGCCACACACTaGAGCAATGCTAAAGCATTGCAAACTCTGTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: KADLVSGCEATH*SNAKALQTLLD Trigger: GTCTAACAGAGTTTGCAATGCTTTAGCATTGCTGCAGTGTGTGGCCTCACACCCGGAGACCAGGTCAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS GCA 72 bp | TGCTTCAGCAGACGGGCTGACGGTTCTTTGGATAGCTaGAGGACCATTTTACCCAAGATCATGGCAACATGG | + |
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Preference number: 6 (lower is better) Translates to: CFSRRADGSLDS*RTILPKIMATW Trigger: CCATGTTGCCATGATCTTGGGTAAAATGGTCCTGCAGCTATCCAAAGAACCGTCAGCCCGTCTGCTGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CCA 72 bp | TTACTACGTGCTTCAGCAGACGGGCTGACGGTTCTTTaGATAGCTGCAGGACCATTTTACCCAAGATCATGG | + |
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Preference number: 6 (lower is better) Translates to: LLRASADGLTVL*IAAGPFYPRSW Trigger: CCATGATCTTGGGTAAAATGGTCCTGCAGCTATCCAAAGAACCGTCAGCCCGTCTGCTGAAGCACGTAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CAA 72 bp | GGGTGTGAGGCCACACACTGCAGCAATGCTAAAGCATaGCAAACTCTGTTAGACTGGTGTGCTGTCAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GCEATHCSNAKA*QTLLDWCAVKV Trigger: AACCTTGACAGCACACCAGTCTAACAGAGTTTGCAATGCTTTAGCATTGCTGCAGTGTGTGGCCTCACACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS CAA 72 bp | CTTACTACGTGCTTCAGCAGACGGGCTGACGGTTCTTaGGATAGCTGCAGGACCATTTTACCCAAGATCATG | + |
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Preference number: 6 (lower is better) Translates to: LTTCFSRRADGS*DSCRTILPKIM Trigger: CATGATCTTGGGTAAAATGGTCCTGCAGCTATCCAAAGAACCGTCAGCCCGTCTGCTGAAGCACGTAGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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| CDS TCA 72 bp | AAGCATTTTCCCTTGTCTCAGGACTGGACAGTTCATTaGTCCACTGATAGATCTTCTCTCTGTCCACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: KHFPLSQDWTVH*STDRSSLCPLG Trigger: CCCAAGTGGACAGAGAGAAGATCTATCAGTGGATCAATGAACTGTCCAGTCCTGAGACAAGGGAAAATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087215.7 |
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