Pregenerated sensors for CNOT8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020515Ensembl transcript IDs: ENSMUST00000020822.12, ENSMUST00000108843.8, ENSMUST00000134896.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCTTCCTAAGACTCCACCTCCAGAGCTTAGCTCTACCACCTCTTaGGAGCTCAGGCTGGAGGCTAAGAGAGCACAGCTGACAGATCAC | + |
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Preference number: 1 (lower is better) Translates to: GLPKTPPPELSSTTS*ELRLEAKRAQLTDH Trigger: GTGATCTGTCAGCTGTGCTCTCTTAGCCTCCAGCCTGAGCTCTCAAGAGGTGGTAGAGCTAAGCTCTGGAGGTGGAGTCTTAGGAAGACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR GCA 90 bp | AAAGGCATCTTTAAACAAAAAGCCAAAGTCTCTGCTTGGAGCAGATaGAGGTCACAGGCGGCATGGTGCACGGACCGCACGGTGCACGCA | + |
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Preference number: 1 (lower is better) Translates to: KGIFKQKAKVSAWSR*RSQAAWCTDRTVHA Trigger: TGCGTGCACCGTGCGGTCCGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACTTTGGCTTTTTGTTTAAAGATGCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR CCA 90 bp | GACTGCTCTGTCCTGAAGAAGCACAAACAAGGCAAAACAGCCCACTaGCATAGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: DCSVLKKHKQGKTAH*HRPASQEHTPCSLA Trigger: TGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCTATGCCAGTGGGCTGTTTTGCCTTGTTTGTGCTTCTTCAGGACAGAGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCAGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGATGGGGCCATGGATGCTaGTGGCAGGAGGCAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SGSHSSSEQLHQSSKAKRWGHGC*WQEAAE Trigger: CTCTGCTGCCTCCTGCCACCAGCATCCATGGCCCCA...TCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCAGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAGTGTCCATGGGGCCATaGATGCTGGTGGCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SGSHSSSEQLHQSSKAKRVSMGP*MLVAGG Trigger: GCCTCCTGCCACCAGCATCCATGGCCCCATGGACAC...TCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGAAGAGGGGTGGGGGCATaGGGACGAGGAAGACTTGTT | + |
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Preference number: 2 (lower is better) Translates to: GSHSSSEQLHQSSKAKRRRGVGA*GRGRLV Trigger: AACAAGTCTTCCTCGTCCTCATGCCCCCACCCCTCT...TCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAGACAGAACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCGTGTCCATGGGGCCATaGATGCTGGTGGCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: EGDRTVCHQLLYHQDCSVVSMGP*MLVAGG Trigger: GCCTCCTGCCACCAGCATCCATGGCCCCATGGACAC...GACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGTTCTGTCTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CCA 90 bp | CAATGGGTTCTGAGGAGAATCCCTTTACTGTCCTGCTCAGTCACTCCTGGGTCTGCCAAAGTCTCTGCTTaGAGCAGATGCAGGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: QWVLRRIPLLSCSVTPGSAKVSA*SRCRSQ Trigger: CTGTGACCTGCATCTGCTCCAAGCAGAGACTTTGGC...AGACCCAGGAGTGACTGAGCAGGACAGTAAAGGGATTCTCCTCAGAACCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR GCA 90 bp | CTAACCTTAAGCACAGTCAACAGGCTTCCAAGCACAACTGTGGGGTGGAGGACTCTGTATCATCAGGACTaGTCTGTCCTGAAGAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LTLSTVNRLPSTTVGWRTLYHQD*SVLKKH Trigger: GTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAG...AGTCCTCCACCCCACAGTTGTGCTTGGAAGCCTGTTGACTGTGCTTAAGGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR GCA 90 bp | CAATGGGTTCTGAGGAGAATCCCTTTACTGTCCTGCTCAGTCACTCCTGGGTCTCTGTATCATCAGGACTaGTCTGTCCTGAAGAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: QWVLRRIPLLSCSVTPGSLYHQD*SVLKKH Trigger: GTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAG...AGACCCAGGAGTGACTGAGCAGGACAGTAAAGGGATTCTCCTCAGAACCCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTGAAGAAGCACCAGCCACAGCTCATCTaGGCAACTTCATCAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TVCHQLLYHQDCSVLKKHQPQLI*ATSSEQ Trigger: CTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTG...GTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR TCA 72 bp | CTTGAGAGCTCAGGCTGGAGGCTAAGAGAGCACAGCTaGCAGATCACGGTGCTGAGAACACCGTGGACGTGG | + |
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Preference number: 3 (lower is better) Translates to: LESSGWRLREHS*QITVLRTPWTW Trigger: CCACGTCCACGGTGTTCTCAGCACCGTGATCTGTCAGCTGTGCTCTCTTAGCCTCCAGCCTGAGCTCTCAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR TCA 72 bp | AAGACTCCACCTCCAGAGCTTAGCTCTACCACCTCTTaGGAGCTCAGGCTGGAGGCTAAGAGAGCACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: KTPPPELSSTTS*ELRLEAKRAQL Trigger: CAGCTGTGCTCTCTTAGCCTCCAGCCTGAGCTCTCAAGAGGTGGTAGAGCTAAGCTCTGGAGGTGGAGTCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR TCA 72 bp | CAAGCACAACTGTGGGGTGGAGGACTCAATGGGTTCTaGGGAGAATCCCTTTACTGTCCTGCTCAGTCACTC | + |
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Preference number: 3 (lower is better) Translates to: QAQLWGGGLNGF*GESLYCPAQSL Trigger: GAGTGACTGAGCAGGACAGTAAAGGGATTCTCCTCAGAACCCATTGAGTCCTCCACCCCACAGTTGTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CAA 90 bp | AGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGAAGAAGCCAAAGTCTCTGCTaGGAGCAGATGCAGGTCACA | + |
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Preference number: 3 (lower is better) Translates to: SHSSSEQLHQSSKAKRRRSQSLC*EQMQVT Trigger: TGTGACCTGCATCTGCTCCAAGCAGAGACTTTGGCT...TCTTCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CAA 90 bp | GGCATAGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCAGCCACAGCTCGAGGACGAGGAAGACTaGTTTACAAATTCAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GIDLLPKNIHLVLWQPQLEDEED*FTNSEQ Trigger: TTGCTCTGAATTTGTAAACAAGTCTTCCTCGTCCTC...GAGCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGGAGACAGAACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCCAAGAACATACACCTaGTTCTCTGGCAGCCACAGC | + |
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Preference number: 3 (lower is better) Translates to: EGDRTVCHQLLYHQDCSVPRTYT*FSGSHS Trigger: GCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGG...GACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGTTCTGTCTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR TCA 72 bp | GCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTaGAGAAGCACAAACAAGGCAAAACAGCCCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: AINYCIIRTALS*RSTNKAKQPTG Trigger: GCCAGTGGGCTGTTTTGCCTTGTTTGTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR CCA 72 bp | GTCCTGAAGAAGCACAAACAAGGCAAAACAGCCCACTaGCATAGACCTGCTTCCCAAGAACATACACCTTGT | + |
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Preference number: 3 (lower is better) Translates to: VLKKHKQGKTAH*HRPASQEHTPC Trigger: ACAAGGTGTATGTTCTTGGGAAGCAGGTCTATGCCAGTGGGCTGTTTTGCCTTGTTTGTGCTTCTTCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CAA 90 bp | GGCATAGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCAGCCACAGCTCAGACATTTTACTGGTTaGTTTCAGACATCCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GIDLLPKNIHLVLWQPQLRHFTG*FQTSWR Trigger: TCTCCAGGATGTCTGAAACAAACCAGTAAAATGTCT...GAGCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCTATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGGAGACAGAACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCGAGGACGAGGAAGACTaGTTTACAAATTCAGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: EGDRTVCHQLLYHQDCSVEDEED*FTNSEQ Trigger: TTGCTCTGAATTTGTAAACAAGTCTTCCTCGTCCTC...GACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGTTCTGTCTCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR-3UTR CAA 90 bp | AGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGAAGAAGACATTTTACTGGTTaGTTTCAGACATCCTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SHSSSEQLHQSSKAKRRRRHFTG*FQTSWR Trigger: TCTCCAGGATGTCTGAAACAAACCAGTAAAATGTCT...TCTTCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| 3UTR GCA 72 bp | AGAACTGTCTGCCATCAATTACTGTATCATCAGGACTaGTCTGTCCTGAAGAAGCACAAACAAGGCAAAACA | + |
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Preference number: 3 (lower is better) Translates to: RTVCHQLLYHQD*SVLKKHKQGKT Trigger: TGTTTTGCCTTGTTTGTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR TCA 90 bp | AGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGGACCGCACGAGTCTGAGCCTGCTTaGTGCTGCCTTCCGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLCLEQMQVTGGMVHGPHESEPA*CCLPIL Trigger: GAGGATCGGAAGGCAGCATCAAGCAGGCTCAGACTC...GTGCGGTCCGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR TCA 90 bp | AAAGCCAAAGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGGAGTCTGAGCCTGCTTaGTGCTGCCTTCCGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: KAKVSAWSRCRSQAAWCTESEPA*CCLPIL Trigger: GAGGATCGGAAGGCAGCATCAAGCAGGCTCAGACTC...CGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACTTTGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR TCA 90 bp | AGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGGACCGCACACCTCACAGATGACCTaGCTGTTTTCTACAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SLCLEQMQVTGGMVHGPHTSQMT*LFSTSA Trigger: GGCACTTGTAGAAAACAGTCAGGTCATCTGTGAGGT...GTGCGGTCCGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR GCA 90 bp | GAAGGAGACAGAACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCTCTGGGCCACCCCTGTaGCCAGGCCATAGAGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: EGDRTVCHQLLYHQDCSVSGPPL*PGHRGA Trigger: GGCGCCTCTATGGCCTGGGCACAGGGGTGGCCCAGA...GACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGTTCTGTCTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR GCA 90 bp | AAAGCCAAAGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGAGCAGCTCTGCAAAGTaGAGTGTATCGATCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KAKVSAWSRCRSQAAWCTSSSAK*SVSIPS Trigger: GGAAGGGATCGATACACTGCACTTTGCAGAGCTGCT...CGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACTTTGGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR GCA 90 bp | GGCATAGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCAGCCACAGCTCTCCACATCCTCATTCTaGTTCTGGGCCACCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GIDLLPKNIHLVLWQPQLSTSSF*FWATPV Trigger: CACAGGGGTGGCCCAGAAGCAGAATGAGGATGTGGA...GAGCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCTATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | AAAGCCAAAGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGCCGTACAACAACACCTaGGAACTCTGTGTCCATAGC | + |
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Preference number: 4 (lower is better) Translates to: KAKVSAWSRCRSQAAWCTPYNNT*ELCVHS Trigger: GCTATGGACACAGAGTTCCCAGGTGTTGTTGTACGG...CGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACTTTGGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | AGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGGACCGCACAACGTAAGGCCCAGCTaGATGATTTTAAGAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: SLCLEQMQVTGGMVHGPHNVRPS*MILRRS Trigger: TGATCTTCTTAAAATCATCCAGCTGGGCCTTACGTT...GTGCGGTCCGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR TCA 90 bp | AAAGCCAAAGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGGAAATGAAAGCCACTTaGCGTTGTCACAGAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: KAKVSAWSRCRSQAAWCTEMKAT*RCHREP Trigger: TGGTTCTCTGTGACAACGTCAAGTGGCTTTCATTTC...CGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACTTTGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | AAGCCAAAGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGGAGATCTATGGAATCCTaGGAGTACATATCCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KPKSLLGADAGHRRHGARRSMES*EYISSV Trigger: GACAGAGGATATGTACTCCCAGGATTCCATAGATCT...CCGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACTTTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | GGCATAGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCAGCCACAGCTCTCCTCCTCGTGTTTCTaGAACTGCAGCCCTGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: GIDLLPKNIHLVLWQPQLSSSCF*NCSPEF Trigger: AAACTCAGGGCTGCAGTTCCAGAAACACGAGGAGGA...GAGCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCTATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | GGCATAGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCAGCCACAGCTCATGCTCATCTTCTCCTaGGCACAGTCCACATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GIDLLPKNIHLVLWQPQLMLIFS*AQSTSS Trigger: TGAGGATGTGGACTGTGCCCAGGAGAAGATGAGCAT...GAGCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCTATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR GCA 90 bp | AGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCAGCCACAGCTCATCTGAGCAGCTCTGCAAAGTaGAGTGTATCGATCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RPASQEHTPCSLAATAHLSSSAK*SVSIPS Trigger: GGAAGGGATCGATACACTGCACTTTGCAGAGCTGCT...CAGATGAGCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | AAAGCCAAAGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGAGATCTATGGAATCCTaGGAGTACATATCCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KAKVSAWSRCRSQAAWCTRSMES*EYISSV Trigger: GACAGAGGATATGTACTCCCAGGATTCCATAGATCT...CGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACTTTGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | AGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGGACCGCACATTTCACATCGTAAATaGACGGGAAGAAAAGATTCA | + |
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Preference number: 4 (lower is better) Translates to: SLCLEQMQVTGGMVHGPHISHRK*TGRKDS Trigger: TGAATCTTTTCTTCCCGTCCATTTACGATGTGAAAT...GTGCGGTCCGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR GCA 90 bp | GGCAGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGATCGTGTTTCTGGAACTaGAGCCCTGAGTTTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: GSHSSSEQLHQSSKAKRRSCFWN*SPEFAS Trigger: GCTTGCAAACTCAGGGCTGCAGTTCCAGAAACACGA...TCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR GCA 90 bp | AGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGAAGATCCACATCCTCATTCTaGTTCTGGGCCACCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SHSSSEQLHQSSKAKRRRSTSSF*FWATPV Trigger: CACAGGGGTGGCCCAGAAGCAGAATGAGGATGTGGA...TCTTCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGATCCTCCTCGTGTTTCTaGAACTGCAGCCCTGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: GSHSSSEQLHQSSKAKRRSSSCF*NCSPEF Trigger: AAACTCAGGGCTGCAGTTCCAGAAACACGAGGAGGA...TCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR TCA 90 bp | TCTGGCAGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAACCTCACAGATGACCTaGCTGTTTTCTACAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SGSHSSSEQLHQSSKAKRTSQMT*LFSTSA Trigger: GGCACTTGTAGAAAACAGTCAGGTCATCTGTGAGGT...TCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR TCA 90 bp | TCTGGCAGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGACCCACACCTCACAGATaGCCTGACTGTTTTCTACAA | + |
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Preference number: 4 (lower is better) Translates to: SGSHSSSEQLHQSSKAKRPTPHR*PDCFLQ Trigger: TTGTAGAAAACAGTCAGGTCATCTGTGAGGTGTGGG...TCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR GCA 90 bp | CAATGGGTTCTGAGGAGAATCCCTTTACTGTCCTGCTCAGTCACTCCTGGGTCTTGTCATAAGCAGCTCTaGAAAGTGCAGTGTATCGAT | + |
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Preference number: 4 (lower is better) Translates to: QWVLRRIPLLSCSVTPGSCHKQL*KVQCID Trigger: ATCGATACACTGCACTTTGCAGAGCTGCTTATGACA...AGACCCAGGAGTGACTGAGCAGGACAGTAAAGGGATTCTCCTCAGAACCCATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR GCA 90 bp | AGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCAGCCACAGCTCATCTGCTCCCTTCAGGTTTTTaGAGCTCTTCATCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RPASQEHTPCSLAATAHLLPSGF*SSSSGI Trigger: AATACCTGATGAAGAGCTGCAAAAACCTGAAGGGAG...CAGATGAGCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | ACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTGAAGAAGCACCCGTACAACAACACCTaGGAACTCTGTGTCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVCHQLLYHQDCSVLKKHPYNNT*ELCVHS Trigger: GCTATGGACACAGAGTTCCCAGGTGTTGTTGTACGG...GTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR TCA 90 bp | ACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTGAAGAAGCACCCCACACCTCACAGATaGCCTGACTGTTTTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: TVCHQLLYHQDCSVLKKHPTPHR*PDCFLQ Trigger: TTGTAGAAAACAGTCAGGTCATCTGTGAGGTGTGGG...GTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR TCA 90 bp | ACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTGAAGAAGCACATAGCTCTTTCATCCTaGAGAAAGCCATCCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVCHQLLYHQDCSVLKKHIALSS*RKPSPS Trigger: TGACGGGGATGGCTTTCTTCAGGATGAAAGAGCTAT...GTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR GCA 90 bp | TGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTGAAGAAGCACAATCGTGTTTCTGGAACTaGAGCCCTGAGTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPSITVSSGLLCPEEAQSCFWN*SPEFAS Trigger: GCTTGCAAACTCAGGGCTGCAGTTCCAGAAACACGA...TTGTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | AGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCAGCCACAGCTCATCTGTTGCAAGCAGATCTATaGAATCCTGGGAGTACATAT | + |
|
Preference number: 4 (lower is better) Translates to: RPASQEHTPCSLAATAHLLQADL*NPGSTY Trigger: ATATGTACTCCCAGGATTCCATAGATCTGCTTGCAA...CAGATGAGCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | TGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTGAAGAAGCACAAATGCTCATCTTCTCCTaGGCACAGTCCACATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPSITVSSGLLCPEEAQMLIFS*AQSTSS Trigger: TGAGGATGTGGACTGTGCCCAGGAGAAGATGAGCAT...TTGTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR TCA 90 bp | TGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTGAAGAAGCACAAATAGCTCTTTCATCCTaGAGAAAGCCATCCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPSITVSSGLLCPEEAQIALSS*RKPSPS Trigger: TGACGGGGATGGCTTTCTTCAGGATGAAAGAGCTAT...TTGTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | AGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGAAGAGATACTGGTAATCTATaGAGCTTCGAAATTCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSSSEQLHQSSKAKRRRDTGNL*SFEIHR Trigger: TCGGTGAATTTCGAAGCTCCATAGATTACCAGTATC...TCTTCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | AGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGAAGATTGCAAGCAGATCTATaGAATCCTGGGAGTACATAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSSEQLHQSSKAKRRRLQADL*NPGSTY Trigger: ATATGTACTCCCAGGATTCCATAGATCTGCTTGCAA...TCTTCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | TCTGGCAGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAATTTCACATCGTAAATaGACGGGAAGAAAAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGSHSSSEQLHQSSKAKRISHRK*TGRKDS Trigger: TGAATCTTTTCTTCCCGTCCATTTACGATGTGAAAT...TCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTGCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CCA 90 bp | TGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTGAAGAAGCACAAGATACTGGTAATCTATaGAGCTTCGAAATTCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: CLPSITVSSGLLCPEEAQDTGNL*SFEIHR Trigger: TCGGTGAATTTCGAAGCTCCATAGATTACCAGTATC...TTGTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | AGTCTCTGCTTGGAGCAGATGCAGGTCACAGGCGGCATGGTGCACGGACCGCACACTGCAGCCCTGAGTTaGCAAGCAGATCTATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLCLEQMQVTGGMVHGPHTAALS*QADLWN Trigger: ATTCCATAGATCTGCTTGCAAACTCAGGGCTGCAGT...GTGCGGTCCGTGCACCATGCCGCCTGTGACCTGCATCTGCTCCAAGCAGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | CAATGGGTTCTGAGGAGAATCCCTTTACTGTCCTGCTCAGTCACTCCTGGGTCTATCTCTTCCTCAAGATaGCTGGCCCACACCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QWVLRRIPLLSCSVTPGSISSSR*LAHTSQ Trigger: CTGTGAGGTGTGGGCCAGCAATCTTGAGGAAGAGAT...AGACCCAGGAGTGACTGAGCAGGACAGTAAAGGGATTCTCCTCAGAACCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | CAATGGGTTCTGAGGAGAATCCCTTTACTGTCCTGCTCAGTCACTCCTGGGTCTGAAAGCCACTTGACGTaGTCACAGAGAACCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QWVLRRIPLLSCSVTPGSESHLT*SQRTTP Trigger: GGGAGTGGTTCTCTGTGACAACGTCAAGTGGCTTTC...AGACCCAGGAGTGACTGAGCAGGACAGTAAAGGGATTCTCCTCAGAACCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | AGACCTGCTTCCCAAGAACATACACCTTGTTCTCTGGCAGCCACAGCTCATCTGCACTGCTGCATGTTGTaGATCATGGCCAAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPASQEHTPCSLAATAHLHCCML*IMAKML Trigger: GAGCATCTTGGCCATGATCAACAACATGCAGCAGTG...CAGATGAGCTGTGGCTGCCAGAGAACAAGGTGTATGTTCTTGGGAAGCAGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | CTAACCTTAAGCACAGTCAACAGGCTTCCAAGCACAACTGTGGGGTGGAGGACTCACTGCTGCATGTTGTaGATCATGGCCAAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTLSTVNRLPSTTVGWRTHCCML*IMAKML Trigger: GAGCATCTTGGCCATGATCAACAACATGCAGCAGTG...AGTCCTCCACCCCACAGTTGTGCTTGGAAGCCTGTTGACTGTGCTTAAGGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | AGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGAAGATACTCCCCCTTCTCATaGGTGAACGTAAGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHSSSEQLHQSSKAKRRRYSPFS*VNVRPS Trigger: GCTGGGCCTTACGTTCACCAATGAGAAGGGGGAGTA...TCTTCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | GAAGGAGACAGAACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCTACTCCCCCTTCTCATaGGTGAACGTAAGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EGDRTVCHQLLYHQDCSVYSPFS*VNVRPS Trigger: GCTGGGCCTTACGTTCACCAATGAGAAGGGGGAGTA...GACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGTTCTGTCTCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS GCA 90 bp | TCCTGGGAGTACATATCCTCTGTCAGGTTGAACTTGAAGTTGAACTaGCATGTGTTGATTCCAGACGGGTACTCCCCCTTCTCATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWEYISSVRLNLKLN*HVLIPDGYSPFSLV Trigger: CACCAATGAGAAGGGGGAGTACCCGTCTGGAATCAACACATGGCAGTTCAACTTCAAGTTCAACCTGACAGAGGATATGTACTCCCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | AGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGAAGAATCTCTTCCTCAAGATaGCTGGCCCACACCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SHSSSEQLHQSSKAKRRRISSSR*LAHTSQ Trigger: CTGTGAGGTGTGGGCCAGCAATCTTGAGGAAGAGAT...TCTTCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | TCTGGCAGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAACTGCAGCCCTGAGTTaGCAAGCAGATCTATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SGSHSSSEQLHQSSKAKRTAALS*QADLWN Trigger: ATTCCATAGATCTGCTTGCAAACTCAGGGCTGCAGT...TCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | GAAGGAGACAGAACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCGAAAGCCACTTGACGTaGTCACAGAGAACCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EGDRTVCHQLLYHQDCSVESHLT*SQRTTP Trigger: GGGAGTGGTTCTCTGTGACAACGTCAAGTGGCTTTC...GACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGTTCTGTCTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | AGCCACAGCTCATCTGAGCAACTTCATCAGAGCAGCAAAGCCAAAAGAAGAAGATTGAACTGCCATGTGTaGATTCCAGACGGGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHSSSEQLHQSSKAKRRRLNCHV*IPDGYS Trigger: GGAGTACCCGTCTGGAATCAACACATGGCAGTTCAA...TCTTCTTCTTTTGGCTTTGCTGCTCTGATGAAGTTGCTCAGATGAGCTGTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS CCA 90 bp | TTCTGGAACTGCAGCCCTGAGTTTGCAAGCAGATCTATGGAATCCTaGGAGTACATATCCTCTGTCAGGTTGAACTTGAAGTTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FWNCSPEFASRSMES*EYISSVRLNLKLNC Trigger: GCAGTTCAACTTCAAGTTCAACCTGACAGAGGATATGTACTCCCAGGATTCCATAGATCTGCTTGCAAACTCAGGGCTGCAGTTCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | GAAGGAGACAGAACTGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCTCTGTCAGGTTGAACTaGAAGTTGAACTGCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGDRTVCHQLLYHQDCSVSVRLN*KLNCHV Trigger: CACATGGCAGTTCAACTTCAAGTTCAACCTGACAGA...GACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACAGTTCTGTCTCCTTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | CCTAACAACTGGGAAGGAGACAGAACTGTCTGCCATCAATTACTGTATCATCAGTCTGTCAGGTTGAACTaGAAGTTGAACTGCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: PNNWEGDRTVCHQLLYHQSVRLN*KLNCHV Trigger: CACATGGCAGTTCAACTTCAAGTTCAACCTGACAGA...CTGATGATACAGTAATTGATGGCAGACAGTTCTGTCTCCTTCCCAGTTGTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | TGTCTGCCATCAATTACTGTATCATCAGGACTGCTCTGTCCTGAAGAAGCACAAATATCCTCTGTCAGGTaGAACTTGAAGTTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLPSITVSSGLLCPEEAQISSVR*NLKLNC Trigger: GCAGTTCAACTTCAAGTTCAACCTGACAGAGGATAT...TTGTGCTTCTTCAGGACAGAGCAGTCCTGATGATACAGTAATTGATGGCAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS-3UTR CAA 90 bp | CCTAACAACTGGGAAGGAGACAGAACTGTCTGCCATCAATTACTGTATCATCAGATATCCTCTGTCAGGTaGAACTTGAAGTTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PNNWEGDRTVCHQLLYHQISSVR*NLKLNC Trigger: GCAGTTCAACTTCAAGTTCAACCTGACAGAGGATAT...CTGATGATACAGTAATTGATGGCAGACAGTTCTGTCTCCTTCCCAGTTGTTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS TCA 72 bp | CATCCTGAAGAAAGCCATCCCCGTCAGCAGAGAGTCTaGGCCTGCTTGATGCTGCCTTCCGATCCTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPEESHPRQQRV*ACLMLPSDPLQ Trigger: CTGCAGAGGATCGGAAGGCAGCATCAAGCAGGCTCAGACTCTCTGCTGACGGGGATGGCTTTCTTCAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS CCA 72 bp | CCCCTGTGCCCAGGCCATAGAGGCGCCCACAATACTTaGCATCGTCAATACTGTCCTCAAAGAATAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLCPGHRGAHNT*HRQYCPQRIAL Trigger: AAGAGCTATTCTTTGAGGACAGTATTGACGATGCCAAGTATTGTGGGCGCCTCTATGGCCTGGGCACAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS CAA 72 bp | CATGTGTTGATTCCAGACGGGTACTCCCCCTTCTCATaGGTGAACGTAAGGCCCAGCTGGATGATTTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HVLIPDGYSPFS*VNVRPSWMILR Trigger: TCTTAAAATCATCCAGCTGGGCCTTACGTTCACCAATGAGAAGGGGGAGTACCCGTCTGGAATCAACACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS CAA 72 bp | CTTCCTCCTCGTGTTTCTGGAACTGCAGCCCTGAGTTaGCAAGCAGATCTATGGAATCCTGGGAGTACATAT | + |
|
Preference number: 6 (lower is better) Translates to: LPPRVSGTAALS*QADLWNPGSTY Trigger: ATATGTACTCCCAGGATTCCATAGATCTGCTTGCAAACTCAGGGCTGCAGTTCCAGAAACACGAGGAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS CAA 90 bp | TTGAACTGCCATGTGTTGATTCCAGACGGGTACTCCCCCTTCTCATaGGTGAACGTAAGGCCCAGCTGGATGATTTTAAGAAGATCAACA | + |
|
Preference number: 6 (lower is better) Translates to: LNCHVLIPDGYSPFS*VNVRPSWMILRRST Trigger: TGTTGATCTTCTTAAAATCATCCAGCTGGGCCTTACGTTCACCAATGAGAAGGGGGAGTACCCGTCTGGAATCAACACATGGCAGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS CAA 90 bp | TACATATCCTCTGTCAGGTTGAACTTGAAGTTGAACTGCCATGTGTaGATTCCAGACGGGTACTCCCCCTTCTCATTGGTGAACGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: YISSVRLNLKLNCHV*IPDGYSPFSLVNVR Trigger: CCTTACGTTCACCAATGAGAAGGGGGAGTACCCGTCTGGAATCAACACATGGCAGTTCAACTTCAAGTTCAACCTGACAGAGGATATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS GCA 72 bp | TACATATCCTCTGTCAGGTTGAACTTGAAGTTGAACTaGCATGTGTTGATTCCAGACGGGTACTCCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: YISSVRLNLKLN*HVLIPDGYSPF Trigger: GAAGGGGGAGTACCCGTCTGGAATCAACACATGGCAGTTCAACTTCAAGTTCAACCTGACAGAGGATATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS CCA 72 bp | CAACATTGCACCGCAGAAGCTGATACTGGTAATCTATaGAGCTTCGAAATTCACCGATCGGCCGTACAACAA | + |
|
Preference number: 6 (lower is better) Translates to: QHCTAEADTGNL*SFEIHRSAVQQ Trigger: TTGTTGTACGGCCGATCGGTGAATTTCGAAGCTCCATAGATTACCAGTATCAGCTTCTGCGGTGCAATGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 ENSMUST00000134896.2 |
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| CDS CCA 72 bp | TACTCCCCCTTCTCATTGGTGAACGTAAGGCCCAGCTaGATGATTTTAAGAAGATCAACATTGCACCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YSPFSLVNVRPS*MILRRSTLHRR Trigger: TCTGCGGTGCAATGTTGATCTTCTTAAAATCATCCAGCTGGGCCTTACGTTCACCAATGAGAAGGGGGAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
||
| CDS CCA 72 bp | TGCAGCCCTGAGTTTGCAAGCAGATCTATGGAATCCTaGGAGTACATATCCTCTGTCAGGTTGAACTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSPEFASRSMES*EYISSVRLNLK Trigger: CTTCAAGTTCAACCTGACAGAGGATATGTACTCCCAGGATTCCATAGATCTGCTTGCAAACTCAGGGCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS CAA 72 bp | TGGGAGTACATATCCTCTGTCAGGTTGAACTTGAAGTaGAACTGCCATGTGTTGATTCCAGACGGGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: WEYISSVRLNLK*NCHVLIPDGYS Trigger: GGAGTACCCGTCTGGAATCAACACATGGCAGTTCAACTTCAAGTTCAACCTGACAGAGGATATGTACTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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| CDS CAA 72 bp | GAATCCTGGGAGTACATATCCTCTGTCAGGTTGAACTaGAAGTTGAACTGCCATGTGTTGATTCCAGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: ESWEYISSVRLN*KLNCHVLIPDG Trigger: CCCGTCTGGAATCAACACATGGCAGTTCAACTTCAAGTTCAACCTGACAGAGGATATGTACTCCCAGGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020822.12 ENSMUST00000108843.8 |
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