Pregenerated sensors for CNOT6L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034724Ensembl transcript IDs: ENSMUST00000036646.14, ENSMUST00000113005.9, ENSMUST00000122003.8, ENSMUST00000129646.8, ENSMUST00000137207.2, ENSMUST00000141383.8, ENSMUST00000155901.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTTTGGTCAGAACAAGCATACATGCTCTTCCGTATCCTCTTCCTaGGCAGGCTCCCACCCTTCTGCTTCCCTTCCTAGTTTTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: AFGQNKHTCSSVSSS*AGSHPSASLPSFLS Trigger: AGAAAGAAAACTAGGAAGGGAAGCAGAAGGGTGGGAGCCTGCTCAGGAAGAGGATACGGAAGAGCATGTATGCTTGTTCTGACCAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR TCA 90 bp | CAGTGTGTTAAATTTGGGCAAGAGGCTAAAGGGAAACCGTGCACATaGAATTTGGGATACCATGCCCTAGGTGTGTGCCACCCAAAACAA | + |
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Preference number: 1 (lower is better) Translates to: QCVKFGQEAKGKPCT*NLGYHALGVCHPKQ Trigger: TTGTTTTGGGTGGCACACACCTAGGGCATGGTATCCCAAATTTCATGTGCACGGTTTCCCTTTAGCCTCTTGCCCAAATTTAACACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR CCA 90 bp | CGTAAGATTCTCAAGTGGCACCTCCTGGCCAACAATAAATGGTGGTaGTGGTGGTGTTTCCCAATACATATAGAGGCATCAAACTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: RKILKWHLLANNKWW*WWCFPIHIEASNFG Trigger: CCCAAAGTTTGATGCCTCTATATGTATTGGGAAACACCACCACCACCACCATTTATTGTTGGCCAGGAGGTGCCACTTGAGAATCTTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036646.14 ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| 3UTR CCA 90 bp | CCCAACACACCTCAGCTTCTTTTGGATGAAAGTACTGCTTGCATTTaGACAACTAACTTTACAAATGCCCGTAGTGCACTTCTCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: PNTPQLLLDESTACI*TTNFTNARSALLSA Trigger: AGCACTGAGAAGTGCACTACGGGCATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAAAAGAAGCTGAGGTGTGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR CCA 90 bp | TTACGTAAGATTCTCAAGTGGCACCTCCTGGCCAACAATAAATGGTaGTGGTGGTGGTGTTTCCCAATACATATAGAGGCATCAAACTTT | + |
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Preference number: 1 (lower is better) Translates to: LRKILKWHLLANNKW*WWWCFPIHIEASNF Trigger: AAAGTTTGATGCCTCTATATGTATTGGGAAACACCACCACCACCACCATTTATTGTTGGCCAGGAGGTGCCACTTGAGAATCTTACGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036646.14 ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| 3UTR TCA 90 bp | GCATTTAACAAGACAATGCTGAGGACAGCAGCATTTCTGATCATCTaGACTGGCAGCTCAAAACAAGATACCACTCCTTTTACAAAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: AFNKTMLRTAAFLII*TGSSKQDTTPFTKG Trigger: TCCCTTTGTAAAAGGAGTGGTATCTTGTTTTGAGCTGCCAGTTCAGATGATCAGAAATGCTGCTGTCCTCAGCATTGTCTTGTTAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR GCA 90 bp | ATTGAACCCAACACACCTCAGCTTCTTTTGGATGAAAGTACTGCTTaGATTTGGACAACTAACTTTACAAATGCCCGTAGTGCACTTCTC | + |
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Preference number: 1 (lower is better) Translates to: IEPNTPQLLLDESTA*IWTTNFTNARSALL Trigger: GAGAAGTGCACTACGGGCATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAAAAGAAGCTGAGGTGTGTTGGGTTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR GCA 90 bp | ACAGATTTACTGTATCTGAATTCTAAAAAGTTGCCTATAGAATGGTaGTGGGATTCTGTTCTCTGCTTGCTTTTAGGCAGTGCTGTTGCT | + |
|
Preference number: 1 (lower is better) Translates to: TDLLYLNSKKLPIEW*WDSVLCLLLGSAVA Trigger: AGCAACAGCACTGCCTAAAAGCAAGCAGAGAACAGAATCCCAGCACCATTCTATAGGCAACTTTTTAGAATTCAGATACAGTAAATCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR GCA 90 bp | CCAGGCGTCATGGCTTCTGATGGCACACTTCTAATTTCAGTTCAGTaGTATCTGTTTTATAGGCTGCACCATAAAAGTCAACATTTAATA | + |
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Preference number: 1 (lower is better) Translates to: PGVMASDGTLLISVQ*YLFYRLHHKSQHLI Trigger: TATTAAATGTTGACTTTTATGGTGCAGCCTATAAAACAGATAGCACTGAACTGAAATTAGAAGTGTGCCATCAGAAGCCATGACGCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR CCA 90 bp | ATACTCAAAGTACTCCTATTGAACCCAACACACCTCAGCTTCTTTTaGATGAAAGTACTGCTTGCATTTGGACAACTAACTTTACAAATG | + |
|
Preference number: 1 (lower is better) Translates to: ILKVLLLNPTHLSFF*MKVLLAFGQLTLQM Trigger: CATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAAAAGAAGCTGAGGTGTGTTGGGTTCAATAGGAGTACTTTGAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR CCA 90 bp | AACACTGAACAATTCCAGATCCAGTGTGTAGTAACAGCCATCCAAACCCCTCCTTCAAGTGGCACCTCCTaGCCAACAATAAATGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: NTEQFQIQCVVTAIQTPPSSGTS*PTINGG Trigger: ACCACCATTTATTGTTGGCCAGGAGGTGCCACTTGA...AGGAGGGGTTTGGATGGCTGTTACTACACACTGGATCTGGAATTGTTCAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR GCA 90 bp | AACACTGAACAATTCCAGATCCAGTGTGTAGTAACAGCCATCCAAACCCCTCCTCGGAAAACAAACAAATaGAGGGATCCCGCTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: NTEQFQIQCVVTAIQTPPRKTNK*RDPAEE Trigger: TTCTTCAGCGGGATCCCTGCATTTGTTTGTTTTCCG...AGGAGGGGTTTGGATGGCTGTTACTACACACTGGATCTGGAATTGTTCAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR CAA 90 bp | ACCACTCCTTTTACAAAGGGAACGAGGGGAAACAGTGTGTTAAATTaGGGCAAGAGGCTAAAGGGAAACCGTGCACATGAAATTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TTPFTKGTRGNSVLN*GKRLKGNRAHEIWD Trigger: ATCCCAAATTTCATGTGCACGGTTTCCCTTTAGCCTCTTGCCCAAATTTAACACACTGTTTCCCCTCGTTCCCTTTGTAAAAGGAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR CCA 90 bp | AACACTGAACAATTCCAGATCCAGTGTGTAGTAACAGCCATCCAAACCCCTCCTTTTACAGAGCTCTTCTaGATGCAATCCTGCGTGATA | + |
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Preference number: 2 (lower is better) Translates to: NTEQFQIQCVVTAIQTPPFTELF*MQSCVI Trigger: TATCACGCAGGATTGCATCCAGAAGAGCTCTGTAAA...AGGAGGGGTTTGGATGGCTGTTACTACACACTGGATCTGGAATTGTTCAGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTAATTTCAGTTCAGTGCTATCTGTTTTATAGGCTGCACCATAAAAGTCAAGAGGATACTGATGCCTaGCAGTGGGTGACGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: LLISVQCYLFYRLHHKSQEDTDA*QWVTGH Trigger: ATGTCCCGTCACCCACTGTCAGGCATCAGTATCCTC...TTGACTTTTATGGTGCAGCCTATAAAACAGATAGCACTGAACTGAAATTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTAATTTCAGTTCAGTGCTATCTGTTTTATAGGCTGCACCATAAAAGTCAATCCAGGCCTTTTACCTaGGACGTCGACACGAATGCC | + |
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Preference number: 2 (lower is better) Translates to: LLISVQCYLFYRLHHKSQSRPFT*DVDTNA Trigger: GGCATTCGTGTCGACGTCTCAGGTAAAAGGCCTGGA...TTGACTTTTATGGTGCAGCCTATAAAACAGATAGCACTGAACTGAAATTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCCAAATCTGTCCTTTCCTCTAAATCATCTCTACTGTTACCTTAAAATGAAAGATGGAATTGGGATCTaGAGTTGGGCTGCCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SPNLSFPLNHLYCYLKMKDGIGI*SWAARP Trigger: AGGCCTGGCAGCCCAACTGCAGATCCCAATTCCATC...TTTCATTTTAAGGTAACAGTAGAGATGATTTAGAGGAAAGGACAGATTTGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR CCA 90 bp | AACACTGAACAATTCCAGATCCAGTGTGTAGTAACAGCCATCCAAACCCCTCCTAACAATAAATGGTGGTaGTGGTGGTGTTTCCCAATA | + |
|
Preference number: 2 (lower is better) Translates to: NTEQFQIQCVVTAIQTPPNNKWW*WWCFPI Trigger: TATTGGGAAACACCACCACCACCACCATTTATTGTT...AGGAGGGGTTTGGATGGCTGTTACTACACACTGGATCTGGAATTGTTCAGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR CCA 90 bp | AACACTGAACAATTCCAGATCCAGTGTGTAGTAACAGCCATCCAAACCCCTCCTAGAAAGGTGTTACTTTaGGTTTTATGGGTGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NTEQFQIQCVVTAIQTPPRKVLL*VLWVER Trigger: TCTCTCCACCCATAAAACCCAAAGTAACACCTTTCT...AGGAGGGGTTTGGATGGCTGTTACTACACACTGGATCTGGAATTGTTCAGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR CCA 90 bp | AACACTGAACAATTCCAGATCCAGTGTGTAGTAACAGCCATCCAAACCCCTCCTTTTGGGTTTTATGGGTaGAGAGAAGAAGAAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: NTEQFQIQCVVTAIQTPPFGFYG*REEENL Trigger: AAGGTTTTCTTCTTCTCTCCACCCATAAAACCCAAA...AGGAGGGGTTTGGATGGCTGTTACTACACACTGGATCTGGAATTGTTCAGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCCCACAAATGGTGTTTATGCTCTCTGCCTCTTACGTAAGATTCTCAAGTCTGCTGGTAAACTTCTaGGTTTATTGGATGACAGAT | + |
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Preference number: 2 (lower is better) Translates to: FSPQMVFMLSASYVRFSSLLVNF*VYWMTD Trigger: ATCTGTCATCCAATAAACTCAGAAGTTTACCAGCAG...ACTTGAGAATCTTACGTAAGAGGCAGAGAGCATAAACACCATTTGTGGGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAAATCTGTCCTTTCCTCTAAATCATCTCTACTGTTACCTTAAAATGAAAGGAAGCTGCTCTGGATaGACTGCAAGATTGTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SPNLSFPLNHLYCYLKMKGSCSG*TARLSS Trigger: GCTTGACAATCTTGCAGTTCATCCAGAGCAGCTTCC...TTTCATTTTAAGGTAACAGTAGAGATGATTTAGAGGAAAGGACAGATTTGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR GCA 90 bp | TTGGATGAAAGTACTGCTTGCATTTGGACAACTAACTTTACAAATGCCCGTAGTTGGGATTCTGTTCTCTaGTTGCTTTTAGGCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LDESTACIWTTNFTNARSWDSVL*LLLGSA Trigger: AGCACTGCCTAAAAGCAAGCAGAGAACAGAATCCCA...ACTACGGGCATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR CCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTGCCAACAATAAATGGTaGTGGTGGTGGTGTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: YRFKHSGDNYERCSWHPIANNKW*WWWCFP Trigger: TGGGAAACACCACCACCACCACCATTTATTGTTGGC...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCCCACAAATGGTGTTTATGCTCTCTGCCTCTTACGTAAGATTCTCAAGTAGTCAATCACACCTTTaGAATCAAAGGTGTAATTGG | + |
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Preference number: 2 (lower is better) Translates to: FSPQMVFMLSASYVRFSSSQSHL*NQRCNW Trigger: CCAATTACACCTTTGATTTCAAAGGTGTGATTGACT...ACTTGAGAATCTTACGTAAGAGGCAGAGAGCATAAACACCATTTGTGGGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCCCACAAATGGTGTTTATGCTCTCTGCCTCTTACGTAAGATTCTCAAGTCCTGTGATAAAGGATTaGCTGTTAAACCTAGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: FSPQMVFMLSASYVRFSSPVIKD*LLNLEF Trigger: AAACTCTAGGTTTAACAGGCAATCCTTTATCACAGG...ACTTGAGAATCTTACGTAAGAGGCAGAGAGCATAAACACCATTTGTGGGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR GCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTTTGCCTATAGAATGGTaGTGGGATTCTGTTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: YRFKHSGDNYERCSWHPILPIEW*WDSVLC Trigger: GCAGAGAACAGAATCCCAGCACCATTCTATAGGCAA...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGATGAAAGTACTGCTTGCATTTGGACAACTAACTTTACAAATGCCCGTAGTTGCTCCCCTTCCCTTTaGTATTCGCTATTGAGTATA | + |
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Preference number: 2 (lower is better) Translates to: LDESTACIWTTNFTNARSCSPSL*YSLLSI Trigger: TATACTCAATAGCGAATAGCAAAGGGAAGGGGAGCA...ACTACGGGCATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR CCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTCCTATAGAATGGTGCTaGGATTCTGTTCTCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: YRFKHSGDNYERCSWHPIPIEWC*DSVLCL Trigger: CAAGCAGAGAACAGAATCCCAGCACCATTCTATAGG...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAAATCTGTCCTTTCCTCTAAATCATCTCTACTGTTACCTTAAAATGAAACCATTGCTACCTGGTTaGATTCCACTGTATGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SPNLSFPLNHLYCYLKMKPLLPG*IPLYAS Trigger: AGAAGCATACAGTGGAATTCAACCAGGTAGCAATGG...TTTCATTTTAAGGTAACAGTAGAGATGATTTAGAGGAAAGGACAGATTTGGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR TCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTGCATTTCTGATCATCTaGACTGGCAGCTCAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: YRFKHSGDNYERCSWHPIAFLII*TGSSKQ Trigger: TTGTTTTGAGCTGCCAGTTCAGATGATCAGAAATGC...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR TCA 90 bp | GTATACAGGTGGTATTTGCGAGTTTTACTAATTCTTGGAAGTACAATACAGACTGCAAGGAGCAGTAAGTaGTTTGAGCCTTTTCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: VYRWYLRVLLILGSTIQTARSSK*FEPFPD Trigger: ATCTGGAAAAGGCTCAAATCACTTACTGCTCCTTGC...AGTCTGTATTGTACTTCCAAGAATTAGTAAAACTCGCAAATACCACCTGTATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR CAA 90 bp | GATACTCAAAGTACTCCTATTGAACCCAACACACCTCAGCTTCTTTaGGATGAAAGTACTGCTTGCATTTGGACAACTAACTTTACAAAT | + |
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Preference number: 2 (lower is better) Translates to: DTQSTPIEPNTPQLL*DESTACIWTTNFTN Trigger: ATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAAAAGAAGCTGAGGTGTGTTGGGTTCAATAGGAGTACTTTGAGTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAAATCTGTCCTTTCCTCTAAATCATCTCTACTGTTACCTTAAAATGAAATCTGAGTTTATTGGATaGCAGATCCAGGTAAACCAG | + |
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Preference number: 2 (lower is better) Translates to: SPNLSFPLNHLYCYLKMKSEFIG*QIQVNQ Trigger: CTGGTTTACCTGGATCTGTCATCCAATAAACTCAGA...TTTCATTTTAAGGTAACAGTAGAGATGATTTAGAGGAAAGGACAGATTTGGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAAATCTGTCCTTTCCTCTAAATCATCTCTACTGTTACCTTAAAATGAAATCTGTTTCCACTTCCTaGAGACTAATGATATCTGCG | + |
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Preference number: 2 (lower is better) Translates to: SPNLSFPLNHLYCYLKMKSVSTS*RLMISA Trigger: CGCAGATATCATTAGTCTTCAGGAAGTGGAAACAGA...TTTCATTTTAAGGTAACAGTAGAGATGATTTAGAGGAAAGGACAGATTTGGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCATTTTACTTACTTTGGAAAACACGTATAATATTATCTGGCTTGCCCTTCTGCTCTGGATGAACTaGAAGATTGTCAAGCATGAA | + |
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Preference number: 2 (lower is better) Translates to: TAILLTLENTYNIIWLALLLWMN*KIVKHE Trigger: TTCATGCTTGACAATCTTGCAGTTCATCCAGAGCAG...AAGGGCAAGCCAGATAATATTATACGTGTTTTCCAAAGTAAGTAAAATGGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCATTTTACTTACTTTGGAAAACACGTATAATATTATCTGGCTTGCCCTTCTTGGCAATATCAGGTaGAATGCGAGCAAGGTTATT | + |
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Preference number: 2 (lower is better) Translates to: TAILLTLENTYNIIWLALLGNIR*NASKVI Trigger: AATAACCTTGCTCGCATTCCACCTGATATTGCCAAG...AAGGGCAAGCCAGATAATATTATACGTGTTTTCCAAAGTAAGTAAAATGGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCATTTTACTTACTTTGGAAAACACGTATAATATTATCTGGCTTGCCCTTCCAGATTATGAAGCTTaGCAATATCAGGTGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: TAILLTLENTYNIIWLALPDYEA*QYQVEC Trigger: GCATTCCACCTGATATTGCCAAGCTTCATAATCTGG...AAGGGCAAGCCAGATAATATTATACGTGTTTTCCAAAGTAAGTAAAATGGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR CCA 90 bp | TCCCCAAATCTGTCCTTTCCTCTAAATCATCTCTACTGTTACCTTAAAATGAAATTTGCCATTGCTACCTaGTTGAATTCCACTGTATGC | + |
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Preference number: 2 (lower is better) Translates to: SPNLSFPLNHLYCYLKMKFAIAT*LNSTVC Trigger: GCATACAGTGGAATTCAACCAGGTAGCAATGGCAAA...TTTCATTTTAAGGTAACAGTAGAGATGATTTAGAGGAAAGGACAGATTTGGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR CCA 90 bp | GTATACAGGTGGTATTTGCGAGTTTTACTAATTCTTGGAAGTACAATACAGACTTTTTCTCCCCACAAATaGTGTTTATGCTCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: VYRWYLRVLLILGSTIQTFSPHK*CLCSLP Trigger: AGGCAGAGAGCATAAACACCATTTGTGGGGAGAAAA...AGTCTGTATTGTACTTCCAAGAATTAGTAAAACTCGCAAATACCACCTGTATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR CCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTTTGAAAGAGTGCATTTaGAAGCAGAGAGACCCAATT | + |
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Preference number: 2 (lower is better) Translates to: YRFKHSGDNYERCSWHPILKECI*KQRDPI Trigger: AATTGGGTCTCTCTGCTTCCAAATGCACTCTTTCAA...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR TCA 90 bp | GTATACAGGTGGTATTTGCGAGTTTTACTAATTCTTGGAAGTACAATACAGACTATAGTGAAAGGAACCTaGAGAAGCAGCGTTAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: VYRWYLRVLLILGSTIQTIVKGT*RSSVKD Trigger: ATCTTTAACGCTGCTTCTTCAGGTTCCTTTCACTAT...AGTCTGTATTGTACTTCCAAGAATTAGTAAAACTCGCAAATACCACCTGTATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCATTTGGCCAACAAACTGTCACATACTATGCTTGATTTTAAAGCATGTTATCAATATCAGGTGGAATaGGAGCAAGGTTATTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: QHLANKLSHTMLDFKACYQYQVE*EQGYCH Trigger: ATGACAATAACCTTGCTCGCATTCCACCTGATATTG...ATAACATGCTTTAAAATCAAGCATAGTATGTGACAGTTTGTTGGCCAAATGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
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| 3UTR-3UTR GCA 90 bp | GTATACAGGTGGTATTTGCGAGTTTTACTAATTCTTGGAAGTACAATACAGACTCTTCTTGCAACAGAGTaGCTCGATCATACACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: VYRWYLRVLLILGSTIQTLLATE*LDHTQN Trigger: ATTTTGTGTATGATCGAGGCACTCTGTTGCAAGAAG...AGTCTGTATTGTACTTCCAAGAATTAGTAAAACTCGCAAATACCACCTGTATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR GCA 90 bp | GTATACAGGTGGTATTTGCGAGTTTTACTAATTCTTGGAAGTACAATACAGACTGTGGGTGACGGGACATaGACTTGTATTACTTTTATA | + |
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Preference number: 2 (lower is better) Translates to: VYRWYLRVLLILGSTIQTVGDGT*TCITFI Trigger: TATAAAAGTAATACAAGTGCATGTCCCGTCACCCAC...AGTCTGTATTGTACTTCCAAGAATTAGTAAAACTCGCAAATACCACCTGTATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTAATTTCAGTTCAGTGCTATCTGTTTTATAGGCTGCACCATAAAAGTCAACTTGCTTTTAGGCAGTaGTGTTGCTTAAAAGTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LLISVQCYLFYRLHHKSQLAFRQ*CCLKVD Trigger: GTCAACTTTTAAGCAACAGCACTGCCTAAAAGCAAG...TTGACTTTTATGGTGCAGCCTATAAAACAGATAGCACTGAACTGAAATTAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR-3UTR GCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTCAAAGAATTCTTGCTTaGTACAGGACCATTACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: YRFKHSGDNYERCSWHPIQRILA*YRTITE Trigger: TTCAGTAATGGTCCTGTAGCAAGCAAGAATTCTTTG...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR-3UTR GCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTGTAACAAAGAATTCTTaGTTGCTACAGGACCATTAC | + |
|
Preference number: 2 (lower is better) Translates to: YRFKHSGDNYERCSWHPIVTKNS*LLQDHY Trigger: GTAATGGTCCTGTAGCAAGCAAGAATTCTTTGTTAC...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGATGAAAGTACTGCTTGCATTTGGACAACTAACTTTACAAATGCCCGTAGTCTAATTTCAGTTCAGTaGTATCTGTTTTATAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LDESTACIWTTNFTNARSLISVQ*YLFYRL Trigger: CAGCCTATAAAACAGATAGCACTGAACTGAAATTAG...ACTACGGGCATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAATTTCAGTTCAGTGCTATCTGTTTTATAGGCTGCACCATAAAAGTCAAAAATGGTGGTGGTGGTaGTGTTTCCCAATACATATA | + |
|
Preference number: 2 (lower is better) Translates to: LLISVQCYLFYRLHHKSQKWWWW*CFPIHI Trigger: TATATGTATTGGGAAACACCACCACCACCACCATTT...TTGACTTTTATGGTGCAGCCTATAAAACAGATAGCACTGAACTGAAATTAGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAATTTCAGTTCAGTGCTATCTGTTTTATAGGCTGCACCATAAAAGTCAACTAGTTTTCTTTCTGTaGCTCTTGCTCAGAACACAT | + |
|
Preference number: 2 (lower is better) Translates to: LLISVQCYLFYRLHHKSQLVFFL*LLLRTH Trigger: ATGTGTTCTGAGCAAGAGCCACAGAAAGAAAACTAG...TTGACTTTTATGGTGCAGCCTATAAAACAGATAGCACTGAACTGAAATTAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR-3UTR CCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTTTACTTTGGGTTTTATaGGTGGAGAGAAGAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: YRFKHSGDNYERCSWHPILLWVL*VERRRK Trigger: TTTTCTTCTTCTCTCCACCCATAAAACCCAAAGTAA...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR TCA 72 bp | GAGATGGCGCTCTCTAACCCCTTCCAGGCGCATACCTaGCCTACCACTCCTGTGTGCTCCCCTTCCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: EMALSNPFQAHT*PTTPVCSPSLC Trigger: GCAAAGGGAAGGGGAGCACACAGGAGTGGTAGGTCAGGTATGCGCCTGGAAGGGGTTAGAGAGCGCCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR TCA 72 bp | AAATTTGGGCAAGAGGCTAAAGGGAAACCGTGCACATaGAATTTGGGATACCATGCCCTAGGTGTGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: KFGQEAKGKPCT*NLGYHALGVCH Trigger: GTGGCACACACCTAGGGCATGGTATCCCAAATTTCATGTGCACGGTTTCCCTTTAGCCTCTTGCCCAAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR CCA 72 bp | GTTTATGCTCTCTGCCTCTTACGTAAGATTCTCAAGTaGCACCTCCTGGCCAACAATAAATGGTGGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VYALCLLRKILK*HLLANNKWWWW Trigger: CCACCACCACCATTTATTGTTGGCCAGGAGGTGCCACTTGAGAATCTTACGTAAGAGGCAGAGAGCATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036646.14 ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| 3UTR CCA 72 bp | AAGTGGCACCTCCTGGCCAACAATAAATGGTGGTGGTaGTGGTGTTTCCCAATACATATAGAGGCATCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KWHLLANNKWWW*WCFPIHIEASN Trigger: GTTTGATGCCTCTATATGTATTGGGAAACACCACCACCACCACCATTTATTGTTGGCCAGGAGGTGCCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036646.14 ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| 3UTR CCA 72 bp | TGGCACCTCCTGGCCAACAATAAATGGTGGTGGTGGTaGTGTTTCCCAATACATATAGAGGCATCAAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: WHLLANNKWWWW*CFPIHIEASNF Trigger: AAAGTTTGATGCCTCTATATGTATTGGGAAACACCACCACCACCACCATTTATTGTTGGCCAGGAGGTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036646.14 ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| 3UTR GCA 72 bp | ACTAATTTTCTCCCCACAAATGGTGTTTATGCTCTCTaGCTCTTACGTAAGATTCTCAAGTGGCACCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TNFLPTNGVYAL*LLRKILKWHLL Trigger: CAGGAGGTGCCACTTGAGAATCTTACGTAAGAGGCAGAGAGCATAAACACCATTTGTGGGGAGAAAATTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036646.14 ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| 3UTR TCA 72 bp | TGTAAAGCTATGAGGATACTGATGCCTGACAGTGGGTaGCGGGACATGCACTTGTATTACTTTTATAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: CKAMRILMPDSG*RDMHLYYFYNG Trigger: GCCATTATAAAAGTAATACAAGTGCATGTCCCGTCACCCACTGTCAGGCATCAGTATCCTCATAGCTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR TCA 72 bp | CTCCTGTGTGCTCCCCTTCCCTTTGCTATTCGCTATTaGGTATACAGGTGGTATTTGCGAGTTTTACTAATT | + |
|
Preference number: 3 (lower is better) Translates to: LLCAPLPFAIRY*VYRWYLRVLLI Trigger: AATTAGTAAAACTCGCAAATACCACCTGTATACTCAATAGCGAATAGCAAAGGGAAGGGGAGCACACAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR TCA 72 bp | CATAAGAAGCAGAGCCATTGTTTGGCACACCAGTATTaGGCCTATAGTCTGAGTTCAAGTAACTACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: HKKQSHCLAHQY*AYSLSSSNYTH Trigger: GTGTGTGTAGTTACTTGAACTCAGACTATAGGCTCAATACTGGTGTGCCAAACAATGGCTCTGCTTCTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR CCA 72 bp | TTATCGAATATATATCACGTCATTCACCTTGTCCTTTaGGCTTCTCACTGCCAAAGTTCCAAATGGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSNIYHVIHLVL*ASHCQSSKWHA Trigger: TGCATGCCATTTGGAACTTTGGCAGTGAGAAGCCCAAAGGACAAGGTGAATGACGTGATATATATTCGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR CCA 72 bp | CCTCAGCTTCTTTTGGATGAAAGTACTGCTTGCATTTaGACAACTAACTTTACAAATGCCCGTAGTGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: PQLLLDESTACI*TTNFTNARSAL Trigger: AAGTGCACTACGGGCATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAAAAGAAGCTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR CCA 72 bp | GTACTCCTATTGAACCCAACACACCTCAGCTTCTTTTaGATGAAAGTACTGCTTGCATTTGGACAACTAACT | + |
|
Preference number: 3 (lower is better) Translates to: VLLLNPTHLSFF*MKVLLAFGQLT Trigger: AGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAAAAGAAGCTGAGGTGTGTTGGGTTCAATAGGAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTCAATTACACACCTTCTaGCAACAGAGTGCCTCGATC | + |
|
Preference number: 3 (lower is better) Translates to: YRFKHSGDNYERCSWHPIQLHTF*QQSASI Trigger: GATCGAGGCACTCTGTTGCAAGAAGGTGTGTAATTG...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR CCA 72 bp | ATACACAGGATAATGAATGGTTTGAAAGAGTGCATTTaGAAGCAGAGAGACCCAATTACACACCTTCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IHRIMNGLKECI*KQRDPITHLLA Trigger: TGCAAGAAGGTGTGTAATTGGGTCTCTCTGCTTCCAAATGCACTCTTTCAAACCATTCATTATCCTGTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR GCA 72 bp | ATGGCTTCTGATGGCACACTTCTAATTTCAGTTCAGTaGTATCTGTTTTATAGGCTGCACCATAAAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: MASDGTLLISVQ*YLFYRLHHKSQ Trigger: TTGACTTTTATGGTGCAGCCTATAAAACAGATAGCACTGAACTGAAATTAGAAGTGTGCCATCAGAAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATACAGGTGGTATTTGCGAGTTTTACTAATTCTTGGAAGTACAATACAGACTCAAAACAACCAGCATTaGGCCAACAAACTGTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: VYRWYLRVLLILGSTIQTQNNQH*ANKLSH Trigger: ATGTGACAGTTTGTTGGCCAAATGCTGGTTGTTTTG...AGTCTGTATTGTACTTCCAAGAATTAGTAAAACTCGCAAATACCACCTGTATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATTTGGCCAACAAACTGTCACATACTATGCTTGATTTTAAAGCATGTTATTCCTGTGATAAAGGATaGCCTGTTAAACCTAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: QHLANKLSHTMLDFKACYSCDKG*PVKPRV Trigger: AACTCTAGGTTTAACAGGCAATCCTTTATCACAGGA...ATAACATGCTTTAAAATCAAGCATAGTATGTGACAGTTTGTTGGCCAAATGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036646.14 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTAATTTCAGTTCAGTGCTATCTGTTTTATAGGCTGCACCATAAAAGTCAATGTAACAAAGAATTCTaGCTTGCTACAGGACCATTA | + |
|
Preference number: 3 (lower is better) Translates to: LLISVQCYLFYRLHHKSQCNKEF*LATGPL Trigger: TAATGGTCCTGTAGCAAGCAAGAATTCTTTGTTACA...TTGACTTTTATGGTGCAGCCTATAAAACAGATAGCACTGAACTGAAATTAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR GCA 90 bp | AACACTGAACAATTCCAGATCCAGTGTGTAGTAACAGCCATCCAAACCCCTCCTGATGGAATTGGGATCTaGAGTTGGGCTGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTEQFQIQCVVTAIQTPPDGIGI*SWAARP Trigger: AGGCCTGGCAGCCCAACTGCAGATCCCAATTCCATC...AGGAGGGGTTTGGATGGCTGTTACTACACACTGGATCTGGAATTGTTCAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCCACAAATGGTGTTTATGCTCTCTGCCTCTTACGTAAGATTCTCAAGTGATGGAATTGGGATCTaGAGTTGGGCTGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSPQMVFMLSASYVRFSSDGIGI*SWAARP Trigger: AGGCCTGGCAGCCCAACTGCAGATCCCAATTCCATC...ACTTGAGAATCTTACGTAAGAGGCAGAGAGCATAAACACCATTTGTGGGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCCACAAATGGTGTTTATGCTCTCTGCCTCTTACGTAAGATTCTCAAGTCCAAAAAGCTCCTTGTaGACCTCTAACACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSPQMVFMLSASYVRFSSPKSSL*TSNTTA Trigger: TGCTGTGGTGTTAGAGGTCCACAAGGAGCTTTTTGG...ACTTGAGAATCTTACGTAAGAGGCAGAGAGCATAAACACCATTTGTGGGGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| 3UTR CAA 72 bp | TTTACAAAGGGAACGAGGGGAAACAGTGTGTTAAATTaGGGCAAGAGGCTAAAGGGAAACCGTGCACATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTKGTRGNSVLN*GKRLKGNRAHE Trigger: TTCATGTGCACGGTTTCCCTTTAGCCTCTTGCCCAAATTTAACACACTGTTTCCCCTCGTTCCCTTTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCCCACAAATGGTGTTTATGCTCTCTGCCTCTTACGTAAGATTCTCAAGTCCATTGCTACCTGGTTaGATTCCACTGTATGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSPQMVFMLSASYVRFSSPLLPG*IPLYAS Trigger: AGAAGCATACAGTGGAATTCAACCAGGTAGCAATGG...ACTTGAGAATCTTACGTAAGAGGCAGAGAGCATAAACACCATTTGTGGGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| 3UTR CAA 72 bp | GCATTTGGAAGCAGAGAGACCCAATTACACACCTTCTaGCAACAGAGTGCCTCGATCATACACAAAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFGSRETQLHTF*QQSASIIHKIN Trigger: GTTTATTTTGTGTATGATCGAGGCACTCTGTTGCAAGAAGGTGTGTAATTGGGTCTCTCTGCTTCCAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR CAA 72 bp | ACTCCTGTGTGCTCCCCTTCCCTTTGCTATTCGCTATaGAGTATACAGGTGGTATTTGCGAGTTTTACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPVCSPSLCYSL*SIQVVFASFTN Trigger: ATTAGTAAAACTCGCAAATACCACCTGTATACTCAATAGCGAATAGCAAAGGGAAGGGGAGCACACAGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR TCA 90 bp | AACACTGAACAATTCCAGATCCAGTGTGTAGTAACAGCCATCCAAACCCCTCCTAGTCAATCACACCTTTaGAATCAAAGGTGTAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTEQFQIQCVVTAIQTPPSQSHL*NQRCNW Trigger: CCAATTACACCTTTGATTTCAAAGGTGTGATTGACT...AGGAGGGGTTTGGATGGCTGTTACTACACACTGGATCTGGAATTGTTCAGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR GCA 90 bp | AACACTGAACAATTCCAGATCCAGTGTGTAGTAACAGCCATCCAAACCCCTCCTCCTGTGATAAAGGATTaGCTGTTAAACCTAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTEQFQIQCVVTAIQTPPPVIKD*LLNLEF Trigger: AAACTCTAGGTTTAACAGGCAATCCTTTATCACAGG...AGGAGGGGTTTGGATGGCTGTTACTACACACTGGATCTGGAATTGTTCAGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR CAA 72 bp | TTTATCGAATATATATCACGTCATTCACCTTGTCCTTaGGGCTTCTCACTGCCAAAGTTCCAAATGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: FIEYISRHSPCP*GFSLPKFQMAC Trigger: GCATGCCATTTGGAACTTTGGCAGTGAGAAGCCCAAAGGACAAGGTGAATGACGTGATATATATTCGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| 3UTR CAA 72 bp | AGTACTCCTATTGAACCCAACACACCTCAGCTTCTTTaGGATGAAAGTACTGCTTGCATTTGGACAACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: STPIEPNTPQLL*DESTACIWTTN Trigger: GTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAAAAGAAGCTGAGGTGTGTTGGGTTCAATAGGAGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCCATTTTACTTACTTTGGAAAACACGTATAATATTATCTGGCTTGCCCTTGGAAGCTGCTCTGGATaGACTGCAAGATTGTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAILLTLENTYNIIWLALGSCSG*TARLSS Trigger: GCTTGACAATCTTGCAGTTCATCCAGAGCAGCTTCC...AAGGGCAAGCCAGATAATATTATACGTGTTTTCCAAAGTAAGTAAAATGGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| CDS-3UTR TCA 90 bp | TTGGATGAAAGTACTGCTTGCATTTGGACAACTAACTTTACAAATGCCCGTAGTCCATTGCTACCTGGTTaGATTCCACTGTATGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDESTACIWTTNFTNARSPLLPG*IPLYAS Trigger: AGAAGCATACAGTGGAATTCAACCAGGTAGCAATGG...ACTACGGGCATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCCATTTTACTTACTTTGGAAAACACGTATAATATTATCTGGCTTGCCCTTCCAAAAAGCTCCTTGTaGACCTCTAACACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TAILLTLENTYNIIWLALPKSSL*TSNTTA Trigger: TGCTGTGGTGTTAGAGGTCCACAAGGAGCTTTTTGG...AAGGGCAAGCCAGATAATATTATACGTGTTTTCCAAAGTAAGTAAAATGGCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| 3UTR CAA 72 bp | AATACACAGGATAATGAATGGTTTGAAAGAGTGCATTaGGAAGCAGAGAGACCCAATTACACACCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTQDNEWFERVH*EAERPNYTPSC Trigger: GCAAGAAGGTGTGTAATTGGGTCTCTCTGCTTCCAAATGCACTCTTTCAAACCATTCATTATCCTGTGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR TCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTTCTGAGTTTATTGGATaGCAGATCCAGGTAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRFKHSGDNYERCSWHPISEFIG*QIQVNQ Trigger: CTGGTTTACCTGGATCTGTCATCCAATAAACTCAGA...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR CCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTCCAGATTATGAAGCTTaGCAATATCAGGTGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: YRFKHSGDNYERCSWHPIPDYEA*QYQVEC Trigger: GCATTCCACCTGATATTGCCAAGCTTCATAATCTGG...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR TCA 90 bp | TATCGTTTTAAGCATTCAGGTGACAATTATGAAAGATGCTCTTGGCACCCTATTCTGCTGGTAAACTTCTaGGTTTATTGGATGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YRFKHSGDNYERCSWHPILLVNF*VYWMTD Trigger: ATCTGTCATCCAATAAACTCAGAAGTTTACCAGCAG...AATAGGGTGCCAAGAGCATCTTTCATAATTGTCACCTGAATGCTTAAAACGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAATCTGTCCTTTCCTCTAAATCATCTCTACTGTTACCTTAAAATGAAACTGCTCTGGATGAACTaGAAGATTGTCAAGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPNLSFPLNHLYCYLKMKLLWMN*KIVKHE Trigger: TTCATGCTTGACAATCTTGCAGTTCATCCAGAGCAG...TTTCATTTTAAGGTAACAGTAGAGATGATTTAGAGGAAAGGACAGATTTGGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| CDS-3UTR GCA 90 bp | CAGCATTTGGCCAACAAACTGTCACATACTATGCTTGATTTTAAAGCATGTTATCTGCTCTGGATGAACTaGAAGATTGTCAAGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHLANKLSHTMLDFKACYLLWMN*KIVKHE Trigger: TTCATGCTTGACAATCTTGCAGTTCATCCAGAGCAG...ATAACATGCTTTAAAATCAAGCATAGTATGTGACAGTTTGTTGGCCAAATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAATCTGTCCTTTCCTCTAAATCATCTCTACTGTTACCTTAAAATGAAACTTGGCAATATCAGGTaGAATGCGAGCAAGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: SPNLSFPLNHLYCYLKMKLGNIR*NASKVI Trigger: AATAACCTTGCTCGCATTCCACCTGATATTGCCAAG...TTTCATTTTAAGGTAACAGTAGAGATGATTTAGAGGAAAGGACAGATTTGGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
||
| CDS-3UTR CCA 90 bp | CAGCATTTGGCCAACAAACTGTCACATACTATGCTTGATTTTAAAGCATGTTATCCAGATTATGAAGCTTaGCAATATCAGGTGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QHLANKLSHTMLDFKACYPDYEA*QYQVEC Trigger: GCATTCCACCTGATATTGCCAAGCTTCATAATCTGG...ATAACATGCTTTAAAATCAAGCATAGTATGTGACAGTTTGTTGGCCAAATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCATTTTACTTACTTTGGAAAACACGTATAATATTATCTGGCTTGCCCTTTTTGCCATTGCTACCTaGTTGAATTCCACTGTATGC | + |
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Preference number: 4 (lower is better) Translates to: TAILLTLENTYNIIWLALFAIAT*LNSTVC Trigger: GCATACAGTGGAATTCAACCAGGTAGCAATGGCAAA...AAGGGCAAGCCAGATAATATTATACGTGTTTTCCAAAGTAAGTAAAATGGCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| 3UTR CAA 72 bp | TTCTTGCTTGCTACAGGACCATTACTGAAATACAATTaGTTTTCTGTGACTGAAGCTACGAACCAGTTAGTA | + |
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Preference number: 4 (lower is better) Translates to: FLLATGPLLKYN*FSVTEATNQLV Trigger: TACTAACTGGTTCGTAGCTTCAGTCACAGAAAACAAATTGTATTTCAGTAATGGTCCTGTAGCAAGCAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| CDS-3UTR TCA 90 bp | CAGCATTTGGCCAACAAACTGTCACATACTATGCTTGATTTTAAAGCATGTTATCTGCTGGTAAACTTCTaGGTTTATTGGATGACAGAT | + |
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Preference number: 4 (lower is better) Translates to: QHLANKLSHTMLDFKACYLLVNF*VYWMTD Trigger: ATCTGTCATCCAATAAACTCAGAAGTTTACCAGCAG...ATAACATGCTTTAAAATCAAGCATAGTATGTGACAGTTTGTTGGCCAAATGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| CDS-3UTR GCA 90 bp | TCCCCAAATCTGTCCTTTCCTCTAAATCATCTCTACTGTTACCTTAAAATGAAACAATATCAGGTGGAATaGGAGCAAGGTTATTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SPNLSFPLNHLYCYLKMKQYQVE*EQGYCH Trigger: ATGACAATAACCTTGCTCGCATTCCACCTGATATTG...TTTCATTTTAAGGTAACAGTAGAGATGATTTAGAGGAAAGGACAGATTTGGGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| CDS-3UTR TCA 90 bp | CAGCATTTGGCCAACAAACTGTCACATACTATGCTTGATTTTAAAGCATGTTATAGTCAATCACACCTTTaGAATCAAAGGTGTAATTGG | + |
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Preference number: 4 (lower is better) Translates to: QHLANKLSHTMLDFKACYSQSHL*NQRCNW Trigger: CCAATTACACCTTTGATTTCAAAGGTGTGATTGACT...ATAACATGCTTTAAAATCAAGCATAGTATGTGACAGTTTGTTGGCCAAATGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| CDS-3UTR GCA 90 bp | ACAGCCATTTTACTTACTTTGGAAAACACGTATAATATTATCTGGCTTGCCCTTCCTGTGATAAAGGATTaGCTGTTAAACCTAGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: TAILLTLENTYNIIWLALPVIKD*LLNLEF Trigger: AAACTCTAGGTTTAACAGGCAATCCTTTATCACAGG...AAGGGCAAGCCAGATAATATTATACGTGTTTTCCAAAGTAAGTAAAATGGCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| 3UTR CAA 72 bp | GAAGAGAAAAGATTCCTCAAACAAAACAACCAGCATTaGGCCAACAAACTGTCACATACTATGCTTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: EEKRFLKQNNQH*ANKLSHTMLDF Trigger: AAAATCAAGCATAGTATGTGACAGTTTGTTGGCCAAATGCTGGTTGTTTTGTTTGAGGAATCTTTTCTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036646.14 ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| CDS GCA 90 bp | TTGGCAATATCAGGTGGAATGCGAGCAAGGTTATTGTCATTTAGGTaGAGTGCTGTCAAGTGTGTTAATGACCAGAGTGATGTACTTAAG | + |
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Preference number: 5 (lower is better) Translates to: LAISGGMRARLLSFR*SAVKCVNDQSDVLK Trigger: CTTAAGTACATCACTCTGGTCATTAACACACTTGACAGCACTGCACCTAAATGACAATAACCTTGCTCGCATTCCACCTGATATTGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113005.9 ENSMUST00000122003.8 ENSMUST00000129646.8 ENSMUST00000137207.2 ENSMUST00000141383.8 ENSMUST00000155901.8 |
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| CDS-3UTR CAA 90 bp | ACAGCCATTTTACTTACTTTGGAAAACACGTATAATATTATCTGGCTTGCCCTTGCCATTGCTACCTGGTaGAATTCCACTGTATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TAILLTLENTYNIIWLALAIATW*NSTVCF Trigger: GAAGCATACAGTGGAATTCAACCAGGTAGCAATGGC...AAGGGCAAGCCAGATAATATTATACGTGTTTTCCAAAGTAAGTAAAATGGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| CDS-3UTR CAA 90 bp | CAGCATTTGGCCAACAAACTGTCACATACTATGCTTGATTTTAAAGCATGTTATGCCATTGCTACCTGGTaGAATTCCACTGTATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: QHLANKLSHTMLDFKACYAIATW*NSTVCF Trigger: GAAGCATACAGTGGAATTCAACCAGGTAGCAATGGC...ATAACATGCTTTAAAATCAAGCATAGTATGTGACAGTTTGTTGGCCAAATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
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| CDS-3UTR CAA 90 bp | TTGGATGAAAGTACTGCTTGCATTTGGACAACTAACTTTACAAATGCCCGTAGTTCCTGTGATAAAGGATaGCCTGTTAAACCTAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: LDESTACIWTTNFTNARSSCDKG*PVKPRV Trigger: AACTCTAGGTTTAACAGGCAATCCTTTATCACAGGA...ACTACGGGCATTTGTAAAGTTAGTTGTCCAAATGCAAGCAGTACTTTCATCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155901.8 |
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| CDS-3UTR CAA 90 bp | ACAGCCATTTTACTTACTTTGGAAAACACGTATAATATTATCTGGCTTGCCCTTTCCTGTGATAAAGGATaGCCTGTTAAACCTAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: TAILLTLENTYNIIWLALSCDKG*PVKPRV Trigger: AACTCTAGGTTTAACAGGCAATCCTTTATCACAGGA...AAGGGCAAGCCAGATAATATTATACGTGTTTTCCAAAGTAAGTAAAATGGCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113005.9 ENSMUST00000155901.8 |
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