Pregenerated sensors for CNOT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035632Ensembl transcript IDs: ENSMUST00000038913.16, ENSMUST00000132344.8, ENSMUST00000135977.8, ENSMUST00000160200.2, ENSMUST00000206287.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGAAGTGGGCCCAAGGGCTTGGCTGCTGGCACTGCTGCCCCCACTaGTACTCAGGGTCACCTCTGCAGGGCTGTCTGCCACAACCGAAC | + |
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Preference number: 1 (lower is better) Translates to: PKWAQGLGCWHCCPH*YSGSPLQGCLPQPN Trigger: GTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGTAGCAGTGGGGGCAGCAGTGCCAGCAGCCAAGCCCTTGGGCCCACTTCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CCA 90 bp | GGGTTCCGGGGGAGGTACTGCCGAATGCGCTCGGAGTCAGAGGGGTaGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGTAT | + |
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Preference number: 1 (lower is better) Translates to: GFRGRYCRMRSESEG*GMWCQAASSMACWY Trigger: ATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGCAGTACCTCCCCCGGAACCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CCA 90 bp | GGGAGCTGGACTGGCCTTAGGGCCCAGGGCACTTGTAGGTGCTGCTaGGGTAGAGGCCCCATTGTTGCCAGGGGTGGAGCTCAAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: GSWTGLRAQGTCRCC*GRGPIVARGGAQGR Trigger: TCTGCCTTGAGCTCCACCCCTGGCAACAATGGGGCCTCTACCCCAGCAGCACCTACAAGTGCCCTGGGCCCTAAGGCCAGTCCAGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CCA 90 bp | AGCCTGGGCATAGGGTGCAGGAGTACCCGAGTTGTGGCTGGGAGCTaGACTGGCCTTAGGGCCCAGGGCACTTGTAGGTGCTGCTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: SLGIGCRSTRVVAGS*TGLRAQGTCRCCWG Trigger: ACCCCAGCAGCACCTACAAGTGCCCTGGGCCCTAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGTACTCCTGCACCCTATGCCCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CCA 90 bp | GGGAGGTACTGCCGAATGCGCTCGGAGTCAGAGGGGTGGGGCATGTaGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGTATAGCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: GRYCRMRSESEGWGM*CQAASSMACWYSCS Trigger: GGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGCAGTACCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR GCA 90 bp | AGGTACTGCCGAATGCGCTCGGAGTCAGAGGGGTGGGGCATGTGGTaGCAGGCGGCCTCTTCCATGGCCTGTTGGTATAGCTGCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: RYCRMRSESEGWGMW*QAASSMACWYSCSL Trigger: CAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGCAGTACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR GCA 90 bp | GGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGTATAGCTaGTCCTTGGTGAGGGAAACTGGCCCCAGTGGACAGACACCCAGT | + |
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Preference number: 1 (lower is better) Translates to: GMWCQAASSMACWYS*SLVRETGPSGQTPS Trigger: ACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR TCA 90 bp | GCCAGGCGGCCTCTTCCATGGCCTGTTGGTATAGCTGCTCCTTGGTaGGGGAAACTGGCCCCAGTGGACAGACACCCAGTGACAATGGTA | + |
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Preference number: 1 (lower is better) Translates to: ARRPLPWPVGIAAPW*GKLAPVDRHPVTMV Trigger: TACCATTGTCACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CCA 90 bp | GCTGAGTGGTTCAGGGGCCTTGATTTCTGGGGTGGTGCTGAACTGTaGAGGACCATTAAGCAGGGTACCAGCTGCCTTGGCTTCACTGAA | + |
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Preference number: 1 (lower is better) Translates to: AEWFRGLDFWGGAEL*RTIKQGTSCLGFTE Trigger: TTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAGTTCAGCACCACCCCAGAAATCAAGGCCCCTGAACCACTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CCA 90 bp | GGATGGCATCAACCAGGATGGAGTCATTGTCCAGCATTCGCAGGATaGTCTCCAGCATACGAACATGGTAGCGGTGCTTCTCGATATGCC | + |
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Preference number: 1 (lower is better) Translates to: GWHQPGWSHCPAFAG*SPAYEHGSGASRYA Trigger: GGCATATCGAGAAGCACCGCTACCATGTTCGTATGCTGGAGACCATCCTGCGAATGCTGGACAATGACTCCATCCTGGTTGATGCCATCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR TCA 90 bp | AGTCGGGGTCCTGGGATGAGTCAACGTAGTACTCCACATCATCCTTaGTCTTGCGGATGGCATCAACCAGGATGGAGTCATTGTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: SRGPGMSQRSTPHHP*SCGWHQPGWSHCPA Trigger: TGCTGGACAATGACTCCATCCTGGTTGATGCCATCCGCAAGATCAAGGATGATGTGGAGTACTACGTTGACTCATCCCAGGACCCCGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCCCTCCGCCTGTGCCACTGTTACTATTGCTGCTGCTCCCTCCGCTGCCAGGGGACTGGGGGTGCTaGTTGCTGTGGACAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PAPPPVPLLLLLLLPPLPGDWGC*LLWTGL Trigger: CAAGCCTGTCCACAGCAACCAGCACCCCCAGTCCCC...TGGCAGCGGAGGGAGCAGCAGCAATAGTAACAGTGGCACAGGCGGAGGGGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATAGGGTGCAGGAGTACCCGAGTTGTGGCTGGGAGCTGGACTGGCCTTAGGGGCACAGCTGGGGACTaGGGGTGCTGGTTGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GIGCRSTRVVAGSWTGLRGTAGD*GCWLLW Trigger: CCACAGCAACCAGCACCCCCAGTCCCCAGCTGTGCC...CCTAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGTACTCCTGCACCCTATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTCAGAGGGGTGGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGTTCACCTCTGACAGCTaGAGGGGTGGCTGGGATGAG | + |
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Preference number: 2 (lower is better) Translates to: ESEGWGMWCQAASSMACWFTSDS*RGGWDE Trigger: CTCATCCCAGCCACCCCTGCAGCTGTCAGAGGTGAA...CCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCAGAGGGGTGGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGGTGGGATGGGAGAGCTaGAGGTTGTTGAGGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: ESEGWGMWCQAASSMACWVGWES*RLLRWV Trigger: CACCCACCTCAACAACCTCCAGCTCTCCCATCCCAC...CCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGAGGACCATTAAGCAGGGTACCAGCTGCCTTGGCTTCACTGAAGCTGGGCTGGGAGCTGGGTTGTaGGGGCCCGAAGTGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LWRTIKQGTSCLGFTEAGLGAGL*GPEVGP Trigger: TGGGCCCACTTCGGGCCCTCACAACCCAGCTCCCAG...CCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGGTCACCTCTGCAGGGCTGTCTGCCACAACCGAACTATAGCTTGTGGCTGCTGCTCCCTCCGCTaGCACCACCACTTCCCCCGC | + |
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Preference number: 2 (lower is better) Translates to: TQGHLCRAVCHNRTIACGCCSLR*HHHFPR Trigger: GCGGGGGAAGTGGTGGTGGCAGCGGAGGGAGCAGCA...GCCACAAGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | CGTTGGCACAGGGTCCTCAATACCAGAGCTGATAGCTGCCCGTTCTGCCATGGAGGCCAGAGGGGTAGGTaGGCGGCACAGCTGGGGACT | + |
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Preference number: 2 (lower is better) Translates to: RWHRVLNTRADSCPFCHGGQRGR*AAQLGT Trigger: AGTCCCCAGCTGTGCCGCCCACCTACCCCTCTGGCC...TCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGGTCACCTCTGCAGGGCTGTCTGCCACAACCGAACTATAGCTTGTGGCGCTGGGGACTGGGGGTaGTGGTTGCTGTGGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: TQGHLCRAVCHNRTIACGAGDWG*WLLWTG Trigger: GCCTGTCCACAGCAACCAGCACCCCCAGTCCCCAGC...GCCACAAGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGAGGACCATTAAGCAGGGTACCAGCTGCCTTGGCTTCACTGAAGCTGGGGGCTGCTGGCACTGCTaGCCCCACTGCTACTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LWRTIKQGTSCLGFTEAGGCWHC*PHCYSG Trigger: CCCTGAGTAGCAGTGGGGGCAGCAGTGCCAGCAGCC...CCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCGGAGTCAGAGGGGTGGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGGAGCCATTTTTGGCTaGAGACTGGCTGACTTCACT | + |
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Preference number: 2 (lower is better) Translates to: ARSQRGGACGARRPLPWPGAIFG*RLADFT Trigger: AGTGAAGTCAGCCAGTCTCCAGCCAAAAATGGCTCC...AGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCTCCTTGGTGAGGGAAACTGGCCCCAGTGGACAGACACCCAGTGACAATCTTGTGGCACCGTTCTaGTTGCCAGCCCCTCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: SCSLVRETGPSGQTPSDNLVAPF*LPAPPP Trigger: AGGCGGAGGGGCTGGCAAGCAGAACGGTGCCACAAG...ATTGTCACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTGATGGGGCTGCCGTACTGGATTCCTTTGAGGTGCTGGGAGCTGGGTTGTACTCAGGGTCACCTCTaGAGGGCTGTCTGCCACAAC | + |
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Preference number: 2 (lower is better) Translates to: PLMGLPYWIPLRCWELGCTQGHL*RAVCHN Trigger: GTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGT...ACAACCCAGCTCCCAGCACCTCAAAGGAATCCAGTACGGCAGCCCCATCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGAGGACCATTAAGCAGGGTACCAGCTGCCTTGGCTTCACTGAAGCTGGGGGAGTACCCGAGTTGTaGCTGGGAGCTGGACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LWRTIKQGTSCLGFTEAGGVPEL*LGAGLA Trigger: GGCCAGTCCAGCTCCCAGCCACAACTCGGGTACTCC...CCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CAA 90 bp | TGGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGTATAGCTGCTCCTaGGTGAGGGAAACTGGCCCCAGTGGACAGACACCCAGTGACAAT | + |
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Preference number: 2 (lower is better) Translates to: WCQAASSMACWYSCS*VRETGPSGQTPSDN Trigger: ATTGTCACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCACAGGGTCCTCAATACCAGAGCTGATAGCTGCCCGTTCTGCCATGGATTTTGGCACCGTTCTGCTTaGCAGCCCCTCCGCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: WHRVLNTRADSCPFCHGFWHRSA*QPLRLC Trigger: GCACAGGCGGAGGGGCTGGCAAGCAGAACGGTGCCA...AAATCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCAGAGGGGTGGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGTGGCATCAACCAGGATaGAGTCATTGTCCAGCATTC | + |
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Preference number: 2 (lower is better) Translates to: ESEGWGMWCQAASSMACWWHQPG*SHCPAF Trigger: GAATGCTGGACAATGACTCCATCCTGGTTGATGCCA...CCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCACAGGGTCCTCAATACCAGAGCTGATAGCTGCCCGTTCTGCCATGGATTTCACATTCCCAGCCCCTaGTGGGGCTGCCGTACTGGA | + |
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Preference number: 2 (lower is better) Translates to: WHRVLNTRADSCPFCHGFHIPSP*WGCRTG Trigger: TCCAGTACGGCAGCCCCATCAGGGGCTGGGAATGTG...AAATCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | CGTTGGCACAGGGTCCTCAATACCAGAGCTGATAGCTGCCCGTTCTGCCATGGATTCCGTAGTGCAGTTTaGTGGGCTGGGTGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: RWHRVLNTRADSCPFCHGFRSAV*WAGWDG Trigger: CCCATCCCACCCAGCCCAGCAAACTGCACTACGGAA...TCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | GCGTCTCAGTTGACAGGCGCTGGTAGAACTCCACAGTGTCCGAGTGTGGGGGTGACTTGTAGGTGCTGCTaGGGTAGAGGCCCCATTGTT | + |
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Preference number: 2 (lower is better) Translates to: ASQLTGAGRTPQCPSVGVTCRCC*GRGPIV Trigger: AACAATGGGGCCTCTACCCCAGCAGCACCTACAAGT...CACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCAACTGAGACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGAGGACCATTAAGCAGGGTACCAGCTGCCTTGGCTTCACTGAAGCTGGGGGGATTTACAGGCAGTaGCACCAAGAGGCTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LWRTIKQGTSCLGFTEAGGIYRQ*HQEAGS Trigger: GGACCCAGCCTCTTGGTGCCACTGCCTGTAAATCCC...CCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR TCA 90 bp | AGACACCCAGTGACAATGGTATGTTCACCTCTGACAGCTGCAGGGGTGGCTGGGCGTACTGGATTCCTTTaGGGTGCTGGGAGCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: RHPVTMVCSPLTAAGVAGRTGFL*GAGSWV Trigger: AACCCAGCTCCCAGCACCTCAAAGGAATCCAGTACG...CCCAGCCACCCCTGCAGCTGTCAGAGGTGAACATACCATTGTCACTGGGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCACAGGGTCCTCAATACCAGAGCTGATAGCTGCCCGTTCTGCCATGGATTTACTGGGGGTGCTGGTTaGTGTGGACAGGCTTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: WHRVLNTRADSCPFCHGFTGGAG*CGQAWS Trigger: GCTCCAAGCCTGTCCACAGCAACCAGCACCCCCAGT...AAATCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGGTCACCTCTGCAGGGCTGTCTGCCACAACCGAACTATAGCTTGTGGCTGTTACTATTGCTGCTaGTCCCTCCGCTGCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: TQGHLCRAVCHNRTIACGCYYCC*SLRCHH Trigger: GTGGTGGCAGCGGAGGGAGCAGCAGCAATAGTAACA...GCCACAAGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGGTCACCTCTGCAGGGCTGTCTGCCACAACCGAACTATAGCTTGTGGCGGGTGCTGGTTGCTGTaGACAGGCTTGGAGCCATTT | + |
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Preference number: 2 (lower is better) Translates to: TQGHLCRAVCHNRTIACGGCWLL*TGLEPF Trigger: AAATGGCTCCAAGCCTGTCCACAGCAACCAGCACCC...GCCACAAGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGAGGACCATTAAGCAGGGTACCAGCTGCCTTGGCTTCACTGAAGCTGGGCATTGTTGCCAGGGGTaGAGCTCAAGGCAGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LWRTIKQGTSCLGFTEAGHCCQG*SSRQKW Trigger: CCACTTCTGCCTTGAGCTCCACCCCTGGCAACAATG...CCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGAGGACCATTAAGCAGGGTACCAGCTGCCTTGGCTTCACTGAAGCTGGGATTCCTTTGAGGTGCTaGGAGCTGGGTTGTGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LWRTIKQGTSCLGFTEAGIPLRC*ELGCEG Trigger: GCCCTCACAACCCAGCTCCCAGCACCTCAAAGGAAT...CCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGAGGACCATTAAGCAGGGTACCAGCTGCCTTGGCTTCACTGAAGCTGGGTGGATTCCTTTGAGGTaGTGGGAGCTGGGTTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LWRTIKQGTSCLGFTEAGWIPLR*WELGCE Trigger: CTCACAACCCAGCTCCCAGCACCTCAAAGGAATCCA...CCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGCTGATAGCTGCCCGTTCTGCCATGGATTTCAGAGAGCTGAGTGGTTCACGTAGTGCAGTTTGCTaGGCTGGGTGGGATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PELIAARSAMDFRELSGSRSAVC*AGWDGR Trigger: TCTCCCATCCCACCCAGCCCAGCAAACTGCACTACG...TGAACCACTCAGCTCTCTGAAATCCATGGCAGAACGGGCAGCTATCAGCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGGTCACCTCTGCAGGGCTGTCTGCCACAACCGAACTATAGCTTGTGGCTGCTGTGGACAGGCTTaGAGCCATTTTTGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TQGHLCRAVCHNRTIACGCCGQA*SHFWLE Trigger: CTCCAGCCAAAAATGGCTCCAAGCCTGTCCACAGCA...GCCACAAGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCTCCTTGGTGAGGGAAACTGGCCCCAGTGGACAGACACCCAGTGACAATACTCCACATCATCCTTaGTCTTGCGGATGGCATCAA | + |
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Preference number: 2 (lower is better) Translates to: SCSLVRETGPSGQTPSDNTPHHP*SCGWHQ Trigger: TTGATGCCATCCGCAAGATCAAGGATGATGTGGAGT...ATTGTCACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CCA 72 bp | CGCTGCCACCACCACTTCCCCCGCTTGGCTGGGCACTaGGGGGCCGTGGCTGGGCATTGCTGGGCCCGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RCHHHFPRLAGH*GAVAGHCWARW Trigger: CCAGCGGGCCCAGCAATGCCCAGCCACGGCCCCCCAGTGCCCAGCCAAGCGGGGGAAGTGGTGGTGGCAGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CCA 72 bp | GGGCCTCCCCCAGTCTTCCAGGGCAGGGCCCTCACCTaGGCAGGGGGATCAGCATGCGAGGGAGGGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: GPPPVFQGRALT*AGGSACEGGRG Trigger: CCCTCTCCCTCCCTCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGGGGAGGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000160200.2 |
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| 3UTR CCA 72 bp | TTGAGGTGCTGGGAGCTGGGTTGTGAGGGCCCGAAGTaGGCCCAAGGGCTTGGCTGCTGGCACTGCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: LRCWELGCEGPK*AQGLGCWHCCP Trigger: GGGGCAGCAGTGCCAGCAGCCAAGCCCTTGGGCCCACTTCGGGCCCTCACAACCCAGCTCCCAGCACCTCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR CCA 72 bp | GGGAGGTACTGCCGAATGCGCTCGGAGTCAGAGGGGTaGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCC | + |
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Preference number: 3 (lower is better) Translates to: GRYCRMRSESEG*GMWCQAASSMA Trigger: GGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGCAGTACCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR GCA 72 bp | GCCCAAGGGCTTGGCTGCTGGCACTGCTGCCCCCACTaGTACTCAGGGTCACCTCTGCAGGGCTGTCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: AQGLGCWHCCPH*YSGSPLQGCLP Trigger: TGGCAGACAGCCCTGCAGAGGTGACCCTGAGTAGCAGTGGGGGCAGCAGTGCCAGCAGCCAAGCCCTTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| 3UTR GCA 72 bp | CCCCTGATGGGGCTGCCGTACTGGATTCCTTTGAGGTaGTGGGAGCTGGGTTGTGAGGGCCCGAAGTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLMGLPYWIPLR*WELGCEGPKWA Trigger: GGCCCACTTCGGGCCCTCACAACCCAGCTCCCAGCACCTCAAAGGAATCCAGTACGGCAGCCCCATCAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGATGGGGCTGCCGTACTGGATTCCTTTGAGGTGCTGGGAGCTGGGTTGTGTGGCACCGTTCTGCTaGCCAGCCCCTCCGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PLMGLPYWIPLRCWELGCVAPFC*PAPPPV Trigger: CACAGGCGGAGGGGCTGGCAAGCAGAACGGTGCCAC...ACAACCCAGCTCCCAGCACCTCAAAGGAATCCAGTACGGCAGCCCCATCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCGGAGTCAGAGGGGTGGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTTGGTATAGCTGCTCCTaGGTGAGGGAAACTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ARSQRGGACGARRPLPWPWYSCS*VRETGP Trigger: GGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCA...AGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CCA 72 bp | ACTGGCCTTAGGGCCCAGGGCACTTGTAGGTGCTGCTaGGGTAGAGGCCCCATTGTTGCCAGGGGTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGLRAQGTCRCC*GRGPIVARGGA Trigger: AGCTCCACCCCTGGCAACAATGGGGCCTCTACCCCAGCAGCACCTACAAGTGCCCTGGGCCCTAAGGCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CCA 72 bp | TGCCGAATGCGCTCGGAGTCAGAGGGGTGGGGCATGTaGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: CRMRSESEGWGM*CQAASSMACWY Trigger: ATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CCA 72 bp | ATAGGGTGCAGGAGTACCCGAGTTGTGGCTGGGAGCTaGACTGGCCTTAGGGCCCAGGGCACTTGTAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: IGCRSTRVVAGS*TGLRAQGTCRC Trigger: GCACCTACAAGTGCCCTGGGCCCTAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGTACTCCTGCACCCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CCA 72 bp | CTGATGGGGCTGCCGTACTGGATTCCTTTGAGGTGCTaGGAGCTGGGTTGTGAGGGCCCGAAGTGGGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LMGLPYWIPLRC*ELGCEGPKWAQ Trigger: TTGGGCCCACTTCGGGCCCTCACAACCCAGCTCCCAGCACCTCAAAGGAATCCAGTACGGCAGCCCCATCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CCA 72 bp | GGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGTTaGTATAGCTGCTCCTTGGTGAGGGAAACTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GMWCQAASSMAC*YSCSLVRETGP Trigger: GGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR GCA 72 bp | TGCCAGGCGGCCTCTTCCATGGCCTGTTGGTATAGCTaGTCCTTGGTGAGGGAAACTGGCCCCAGTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: CQAASSMACWYS*SLVRETGPSGQ Trigger: CTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATAGGGTGCAGGAGTACCCGAGTTGTGGCTGGGAGCTGGACTGGCCTTAGGGGCTTGGAGCCATTTTaGGCTGGAGACTGGCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: GIGCRSTRVVAGSWTGLRGLEPF*AGDWLT Trigger: AGTCAGCCAGTCTCCAGCCAAAAATGGCTCCAAGCC...CCTAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGTACTCCTGCACCCTATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGCTCCTTGGTGAGGGAAACTGGCCCCAGTGGACAGACACCCAGTGACAATCCGTACTGGATTCCTTaGAGGTGCTGGGAGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SCSLVRETGPSGQTPSDNPYWIP*RCWELG Trigger: ACCCAGCTCCCAGCACCTCAAAGGAATCCAGTACGG...ATTGTCACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR GCA 72 bp | CCCACTGCTACTCAGGGTCACCTCTGCAGGGCTGTCTaGCACAACCGAACTATAGCTTGTGGCACCGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTATQGHLCRAV*HNRTIACGTVL Trigger: CAGAACGGTGCCACAAGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGTAGCAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR GCA 72 bp | CCACAACCGAACTATAGCTTGTGGCACCGTTCTGCTTaGCAGCCCCTCCGCCTGTGCCACTGTTACTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: PQPNYSLWHRSA*QPLRLCHCYYC Trigger: GCAATAGTAACAGTGGCACAGGCGGAGGGGCTGGCAAGCAGAACGGTGCCACAAGCTATAGTTCGGTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CCA 72 bp | TTCAGGGGCCTTGATTTCTGGGGTGGTGCTGAACTGTaGAGGACCATTAAGCAGGGTACCAGCTGCCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FRGLDFWGGAEL*RTIKQGTSCLG Trigger: GCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAGTTCAGCACCACCCCAGAAATCAAGGCCCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGCTGATAGCTGCCCGTTCTGCCATGGATTTCAGAGAGCTGAGTGGTTCAGTGCCACTGTTACTATaGCTGCTGCTCCCTCCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PELIAARSAMDFRELSGSVPLLL*LLLPPL Trigger: CAGCGGAGGGAGCAGCAGCAATAGTAACAGTGGCAC...TGAACCACTCAGCTCTCTGAAATCCATGGCAGAACGGGCAGCTATCAGCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR GCA 72 bp | AGGGTCCTCAATACCAGAGCTGATAGCTGCCCGTTCTaGCATGGATTTCAGAGAGCTGAGTGGTTCAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RVLNTRADSCPF*HGFQRAEWFRG Trigger: GCCCCTGAACCACTCAGCTCTCTGAAATCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR GCA 72 bp | CGTTGGCACAGGGTCCTCAATACCAGAGCTGATAGCTaGCCGTTCTGCCATGGATTTCAGAGAGCTGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RWHRVLNTRADS*PFCHGFQRAEW Trigger: CCACTCAGCTCTCTGAAATCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CCA 72 bp | GAGCTGGAGGTTGTTGAGGTGGGTGTACTGCTAGACTaGTTGAAGATCTCGTCCTCCATGTGGCTGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ELEVVEVGVLLD*LKISSSMWLWL Trigger: CAGCCACAGCCACATGGAGGACGAGATCTTCAACCAGTCTAGCAGTACACCCACCTCAACAACCTCCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CCA 72 bp | AGCTGCCCGTTCTGCCATGGATTTCAGAGAGCTGAGTaGTTCAGGGGCCTTGATTTCTGGGGTGGTGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SCPFCHGFQRAE*FRGLDFWGGAE Trigger: TTCAGCACCACCCCAGAAATCAAGGCCCCTGAACCACTCAGCTCTCTGAAATCCATGGCAGAACGGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGAGTTTTCCGTAGTGCAGTTTGCTGGGCTGGGTGGGATGGGAGAGCTGGAACCAGGATGGAGTCATaGTCCAGCATTCGCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: FRVFRSAVCWAGWDGRAGTRMES*SSIRRM Trigger: CATCCTGCGAATGCTGGACAATGACTCCATCCTGGT...TCCAGCTCTCCCATCCCACCCAGCCCAGCAAACTGCACTACGGAAAACTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CCA 72 bp | CAACCAGGATGGAGTCATTGTCCAGCATTCGCAGGATaGTCTCCAGCATACGAACATGGTAGCGGTGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QPGWSHCPAFAG*SPAYEHGSGAS Trigger: AGAAGCACCGCTACCATGTTCGTATGCTGGAGACCATCCTGCGAATGCTGGACAATGACTCCATCCTGGTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR TCA 72 bp | CTCCAGATAGTAGAAGATGAAGAAGAGCGTCTCAGTTaGCAGGCGCTGGTAGAACTCCACAGTGTCCGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQIVEDEEERLS*QALVELHSVRV Trigger: CACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCAACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR TCA 72 bp | CCTGGGATGAGTCAACGTAGTACTCCACATCATCCTTaGTCTTGCGGATGGCATCAACCAGGATGGAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PGMSQRSTPHHP*SCGWHQPGWSH Trigger: ATGACTCCATCCTGGTTGATGCCATCCGCAAGATCAAGGATGATGTGGAGTACTACGTTGACTCATCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CCA 90 bp | GCTCGGAGTCAGAGGGGTGGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGGGCTGCAGAGCACCTaGCCAGCCCTCATCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARSQRGGACGARRPLPWPGLQST*PALILV Trigger: GACAAGGATGAGGGCTGGCCAGGTGCTCTGCAGCCC...AGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGATGGGGCTGCCGTACTGGATTCCTTTGAGGTGCTGGGAGCTGGGTTGTCGGTCCTGCTTCTGCTaGCGAGCCCAGGGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLMGLPYWIPLRCWELGCRSCFC*RAQGQA Trigger: AGCCTGGCCCTGGGCTCGCCAGCAGAAGCAGGACCG...ACAACCCAGCTCCCAGCACCTCAAAGGAATCCAGTACGGCAGCCCCATCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR GCA 90 bp | TGGCACAGGGTCCTCAATACCAGAGCTGATAGCTGCCCGTTCTGCCATGGATTTGCCAGGCTCAGGGGCTaGAGAGCACCTGGCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WHRVLNTRADSCPFCHGFARLRG*RAPGQP Trigger: GGGCTGGCCAGGTGCTCTGCAGCCCCTGAGCCTGGC...AAATCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CAA 72 bp | GCGGCCTCTTCCATGGCCTGTTGGTATAGCTGCTCCTaGGTGAGGGAAACTGGCCCCAGTGGACAGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: AASSMACWYSCS*VRETGPSGQTP Trigger: GGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGTTTTCCGTAGTGCAGTTTGCTGGGCTGGGTGGGATGGGAGAGCTGGAATCCGGTCCTGCTTCTaGTGGCGAGCCCAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRVFRSAVCWAGWDGRAGIRSCF*WRAQGQ Trigger: CTGGCCCTGGGCTCGCCAGCAGAAGCAGGACCGGAT...TCCAGCTCTCCCATCCCACCCAGCCCAGCAAACTGCACTACGGAAAACTCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGATGGGGCTGCCGTACTGGATTCCTTTGAGGTGCTGGGAGCTGGGTTGTGTGTTCGTGAGCCACTaGCCAACTTCTTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLMGLPYWIPLRCWELGCVFVSH*PTSSFS Trigger: GGAGAAGGAAGAAGTTGGCCAGTGGCTCACGAACAC...ACAACCCAGCTCCCAGCACCTCAAAGGAATCCAGTACGGCAGCCCCATCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR TCA 90 bp | CAGGATGGAGTCATTGTCCAGCATTCGCAGGATGGTCTCCAGCATACGAACATGGCAGGATCCACCTTCTaGGCCAGACCCAGACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDGVIVQHSQDGLQHTNMAGSTF*ARPRPS Trigger: GGAGGGTCTGGGTCTGGCTCAGAAGGTGGATCCTGC...CATGTTCGTATGCTGGAGACCATCCTGCGAATGCTGGACAATGACTCCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CAA 72 bp | AACTGTGGAGGACCATTAAGCAGGGTACCAGCTGCCTaGGCTTCACTGAAGCTGGGCGTTGGAGAACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NCGGPLSRVPAA*ASLKLGVGELG Trigger: CCCCAGTTCTCCAACGCCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGAGGGGTGGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGTATACGCTTTGGTTTTaGTCTCTCGTTCCACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: ESEGWGMWCQAASSMACWYTLWF*SLVPQL Trigger: AAGTTGTGGAACGAGAGACCAAAACCAAAGCGTATA...CCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGAGGGGTGGGGCATGTGGTGCCAGGCGGCCTCTTCCATGGCCTGTTGGACTTCACTCTCAAACTaGTCCACCTGCATATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESEGWGMWCQAASSMACWTSLSN*STCIFK Trigger: CTTAAATATGCAGGTGGACCAGTTTGAGAGTGAAGT...CCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGCTCCTTGGTGAGGGAAACTGGCCCCAGTGGACAGACACCCAGTGACAATTGTCGCCTTTCTTCTTaGGTGTCTGTACCGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSLVRETGPSGQTPSDNCRLSS*VSVPTV Trigger: CACTGTCGGTACAGACACGCAAGAAGAAAGGCGACA...ATTGTCACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGGTCACCTCTGCAGGGCTGTCTGCCACAACCGAACTATAGCTTGTGGCCTCGTTCCACAACTTTaGACCGTTCCATTTGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQGHLCRAVCHNRTIACGLVPQL*TVPFAS Trigger: AGACGCAAATGGAACGGTTCAAAGTTGTGGAACGAG...GCCACAAGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CAA 72 bp | GGGTGCTGGTTGCTGTGGACAGGCTTGGAGCCATTTTaGGCTGGAGACTGGCTGACTTCACTATCTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GCWLLWTGLEPF*AGDWLTSLSVD Trigger: ATCTACAGATAGTGAAGTCAGCCAGTCTCCAGCCAAAAATGGCTCCAAGCCTGTCCACAGCAACCAGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGCTGGAGGTTGTTGAGGTGGGTGTACTGCTAGACTGGTTGAAGATCTCGGACCCAGACCCTCCTTaGTATACGCTTTGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GELEVVEVGVLLDWLKISDPDPP*YTLWFW Trigger: CCAAAACCAAAGCGTATAGCAAGGAGGGTCTGGGTC...CGAGATCTTCAACCAGTCTAGCAGTACACCCACCTCAACAACCTCCAGCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCGCCTGTGGAATGTCCTCGAGGTCCAGGTCGTCATAGAGGAATTCGTTCTCCTTGCTATACGCTTTaGTTTTGGTCTCTCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAPVECPRGPGRHRGIRSPCYTL*FWSLVP Trigger: TGGAACGAGAGACCAAAACCAAAGCGTATAGCAAGG...AGAACGAATTCCTCTATGACGACCTGGACCTCGAGGACATTCCACAGGCGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| 3UTR CAA 72 bp | TTGATCTTGCGGATGGCATCAACCAGGATGGAGTCATaGTCCAGCATTCGCAGGATGGTCTCCAGCATACGA | + |
|
Preference number: 4 (lower is better) Translates to: LILRMASTRMES*SSIRRMVSSIR Trigger: TCGTATGCTGGAGACCATCCTGCGAATGCTGGACAATGACTCCATCCTGGTTGATGCCATCCGCAAGATCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS GCA 90 bp | TCCGGTCCTGCTTCTGCTGGCGAGCCCAGGGCCAGGCTCAGGGGCTaGAGAGCACCTGGCCAGCCCTCATCCTTGTCGCCTTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPASAGEPRARLRG*RAPGQPSSLSPFFL Trigger: CAAGAAGAAAGGCGACAAGGATGAGGGCTGGCCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTCGCCAGCAGAAGCAGGACCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGTTCCGGGGGAGGTACTGCCGAATGCGCTCGGAGTCAGAGGGGTGGGGCTATACGCTTTGGTTTaGGTCTCTCGTTCCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: ARVPGEVLPNALGVRGVGLYALV*VSRSTT Trigger: AGTTGTGGAACGAGAGACCAAAACCAAAGCGTATAG...CCCCACCCCTCTGACTCCGAGCGCATTCGGCAGTACCTCCCCCGGAACCCTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CAA 90 bp | AGACACCCAGTGACAATGGTATGTTCACCTCTGACAGCTGCAGGGGTGGCTGGGGGCCAGCCCTCATCCTaGTCGCCTTTCTTCTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RHPVTMVCSPLTAAGVAGGQPSS*SPFFLR Trigger: ACGCAAGAAGAAAGGCGACAAGGATGAGGGCTGGCC...CCCAGCCACCCCTGCAGCTGTCAGAGGTGAACATACCATTGTCACTGGGTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS GCA 90 bp | GCTGCAGAGCACCTGGCCAGCCCTCATCCTTGTCGCCTTTCTTCTTaGGTGTCTGTACCGACAGTGACTCCACTTCACTCTCAAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAEHLASPHPCRLSS*VSVPTVTPLHSQTG Trigger: ACCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTACAGACACGCAAGAAGAAAGGCGACAAGGATGAGGGCTGGCCAGGTGCTCTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTGATGGGGCTGCCGTACTGGATTCCTTTGAGGTGCTGGGAGCTGGGTTGTTCTCGTTCCACAACTTaGAACCGTTCCATTTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLMGLPYWIPLRCWELGCSRSTT*NRSICV Trigger: GACGCAAATGGAACGGTTCAAAGTTGTGGAACGAGA...ACAACCCAGCTCCCAGCACCTCAAAGGAATCCAGTACGGCAGCCCCATCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS-3UTR CAA 90 bp | GCGTCTCAGTTGACAGGCGCTGGTAGAACTCCACAGTGTCCGAGTGTGGGGGTGTCCTTGCTATACGCTTaGGTTTTGGTCTCTCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASQLTGAGRTPQCPSVGVSLLYA*VLVSRS Trigger: GGAACGAGAGACCAAAACCAAAGCGTATAGCAAGGA...CACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCAACTGAGACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
||
| CDS TCA 90 bp | CTTGGTTCCCTCCAGATAGTAGAAGATGAAGAAGAGCGTCTCAGTTaGCAGGCGCTGGTAGAACTCCACAGTGTCCGAGTGTGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGSLQIVEDEEERLS*QALVELHSVRVWGW Trigger: CCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCAACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAGGGAACCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038913.16 |
||
| CDS GCA 90 bp | TGCCTCTGGAACCACATCATATACTTGGTGTGGAATCGCCAGGACTaGTTCTTTAGGGCCTTGGCTGCCAAGTACTGTGCCTTGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CLWNHIIYLVWNRQD*FFRALAAKYCALVP Trigger: GGGAACCAAGGCACAGTACTTGGCAGCCAAGGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038913.16 |
||
| CDS CCA 90 bp | GTCTTAGGCTCCTCGTGCCTCTGGAACCACATCATATACTTGGTGTaGAATCGCCAGGACTGCTTCTTTAGGGCCTTGGCTGCCAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VLGSSCLWNHIIYLV*NRQDCFFRALAAKY Trigger: GTACTTGGCAGCCAAGGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000160200.2 |
||
| CDS TCA 90 bp | TGGCTGCCAAGTACTGTGCCTTGGTTCCCTCCAGATAGTAGAAGATaGAGAAGAGCGTCTCAGTTGACAGGCGCTGGTAGAACTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: WLPSTVPWFPPDSRR*RRASQLTGAGRTPQ Trigger: CTGTGGAGTTCTACCAGCGCCTGTCAACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAGGGAACCAAGGCACAGTACTTGGCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038913.16 |
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| CDS CCA 90 bp | CCCTGCTCAAACTCATCTGTGATGGTCTTAGGCTCCTCGTGCCTCTaGAACCACATCATATACTTGGTGTGGAATCGCCAGGACTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PCSNSSVMVLGSSCL*NHIIYLVWNRQDCF Trigger: GAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCACAGATGAGTTTGAGCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038913.16 |
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| CDS-3UTR CAA 90 bp | CCAGAGCTGATAGCTGCCCGTTCTGCCATGGATTTCAGAGAGCTGAGTGGTTCAAGACCCAGACCCTCCTaGCTATACGCTTTGGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: PELIAARSAMDFRELSGSRPRPS*LYALVL Trigger: CAAAACCAAAGCGTATAGCAAGGAGGGTCTGGGTCT...TGAACCACTCAGCTCTCTGAAATCCATGGCAGAACGGGCAGCTATCAGCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| CDS GCA 90 bp | GTCTGTACCGACAGTGACTCCACTTCACTCTCAAACTGGTCCACCTaGATATTTAAGGTGTCAATGGTGTTCGTGAGCCACTGGCCAACT | + |
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Preference number: 5 (lower is better) Translates to: VCTDSDSTSLSNWST*IFKVSMVFVSHWPT Trigger: AGTTGGCCAGTGGCTCACGAACACCATTGACACCTTAAATATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000135977.8 |
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| CDS GCA 90 bp | ACTGAGATCTGCTCAAACTCATCTGTGATGGTCTTAGGCTCCTCGTaGCTCTGGAACCACATCATATACTTGGTGTGGAATCGCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: TEICSNSSVMVLGSS*LWNHIIYLVWNRQD Trigger: GTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCACAGATGAGTTTGAGCAGATCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160200.2 |
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| CDS CCA 90 bp | TCATATACTTGGTGTGGAATCGCCAGGACTGCTTCTTTAGGGCCTTaGCTGCCAAGTACTGTGCCTTGGTTCCCTCCAGATAGTAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SYTWCGIARTASLGP*LPSTVPWFPPDSRR Trigger: TCTTCTACTATCTGGAGGGAACCAAGGCACAGTACTTGGCAGCCAAGGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038913.16 |
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| CDS CCA 90 bp | ATCTGCTCAAACTCATCTGTGATGGTCTTAGGCTCCTCGTGCCTCTaGAACCACATCATATACTTGGTGTGGAATCGCCAGGACTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ICSNSSVMVLGSSCL*NHIIYLVWNRQDCF Trigger: GAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCACAGATGAGTTTGAGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160200.2 |
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| CDS CCA 90 bp | TTCTTGCGTGTCTGTACCGACAGTGACTCCACTTCACTCTCAAACTaGTCCACCTGCATATTTAAGGTGTCAATGGTGTTCGTGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: FLRVCTDSDSTSLSN*STCIFKVSMVFVSH Trigger: GTGGCTCACGAACACCATTGACACCTTAAATATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTACAGACACGCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000135977.8 |
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| CDS GCA 90 bp | AACCGTTCCATTTGCGTCTCAATGAGCTTGCGGTTTTCAATAAGCTaGCTTTTGTCCTTGATCTCATTTGATGCTACCCATGTCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: NRSICVSMSLRFSIS*LLSLISFDATHVLI Trigger: GATCAAGACATGGGTAGCATCAAATGAGATCAAGGACAAAAGGCAGCTTATTGAAAACCGCAAGCTCATTGAGACGCAAATGGAACGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000206287.2 |
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| CDS CCA 90 bp | AGCTTCTTAATCTCCTTCTTTAGGTCAGCCTCATACTTTTCTTTCTaGTTCGCGTTGGCTGCATTGTGGAGCTTTTGCCAAATATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SFLISFFRSASYFSF*FALAALWSFCQISS Trigger: TGAAGATATTTGGCAAAAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000206287.2 |
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| CDS GCA 72 bp | GCTGGCCCCACTTCTCGTAGTCAAAGTAGATGTAGGTaGCCTGGCCGGGGAAGAAGGTGGTCAGTGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: AGPTSRSQSRCR*PGRGRRWSVSG Trigger: TCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160200.2 |
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| CDS CAA 90 bp | GGCTGCAGAGCACCTGGCCAGCCCTCATCCTTGTCGCCTTTCTTCTaGCGTGTCTGTACCGACAGTGACTCCACTTCACTCTCAAACTGG | + |
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Preference number: 6 (lower is better) Translates to: GCRAPGQPSSLSPFF*RVCTDSDSTSLSNW Trigger: CCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTACAGACACGCAAGAAGAAAGGCGACAAGGATGAGGGCTGGCCAGGTGCTCTGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135977.8 |
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| CDS CAA 90 bp | GTGATGGTCTTAGGCTCCTCGTGCCTCTGGAACCACATCATATACTaGGTGTGGAATCGCCAGGACTGCTTCTTTAGGGCCTTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VMVLGSSCLWNHIIY*VWNRQDCFFRALAA Trigger: GGCAGCCAAGGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000160200.2 |
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| CDS TCA 72 bp | ACTTCTTCCTTCTCCTTCTGGGCAGGATCCACCTTCTaGGCCAGACCCAGACCCTCCTTGCTATACGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TSSFSFWAGSTF*ARPRPSLLYAL Trigger: CAAAGCGTATAGCAAGGAGGGTCTGGGTCTGGCTCAGAAGGTGGATCCTGCCCAGAAGGAGAAGGAAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000135977.8 |
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| CDS GCA 72 bp | CAGGATCCACCTTCTGAGCCAGACCCAGACCCTCCTTaGTATACGCTTTGGTTTTGGTCTCTCGTTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: QDPPSEPDPDPP*YTLWFWSLVPQ Trigger: TTGTGGAACGAGAGACCAAAACCAAAGCGTATAGCAAGGAGGGTCTGGGTCTGGCTCAGAAGGTGGATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000135977.8 |
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| CDS GCA 72 bp | TCCGGTCCTGCTTCTGATCCTTGTCGCCTTTCTTCTTaGGTGTCTGTACCGACAGTGACTCCACTTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: SGPASDPCRLSS*VSVPTVTPLHS Trigger: AGAGTGAAGTGGAGTCACTGTCGGTACAGACACGCAAGAAGAAAGGCGACAAGGATCAGAAGCAGGACCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132344.8 |
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| CDS CCA 72 bp | TCCTCGTGCCTCTGGAACCACATCATATACTTGGTGTaGAATCGCCAGGACTGCTTCTTTAGGGCCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSCLWNHIIYLV*NRQDCFFRALA Trigger: AGCCAAGGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000160200.2 |
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| CDS CAA 72 bp | TTAGGCTCCTCGTGCCTCTGGAACCACATCATATACTaGGTGTGGAATCGCCAGGACTGCTTCTTTAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGSSCLWNHIIY*VWNRQDCFFRA Trigger: GGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000160200.2 |
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| CDS TCA 72 bp | TATCTTCAAACTGCTCCACCCCTTCGGACACCTTCTTaGGGCAGCGATCAATCTCACCTTGGAGTTTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: YLQTAPPLRTPS*GSDQSHLGVCA Trigger: AGCGCAAACTCCAAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAAGGGGTGGAGCAGTTTGAAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000206287.2 |
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| CDS GCA 72 bp | CAATCCGGTCCTGCTTATCCTTGTCGCCTTTCTTCTTaGGTGTCTGTACCGACAGTGACTCCACTTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: QSGPAYPCRLSS*VSVPTVTPLHS Trigger: AGAGTGAAGTGGAGTCACTGTCGGTACAGACACGCAAGAAGAAAGGCGACAAGGATAAGCAGGACCGGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038913.16 |
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| CDS GCA 72 bp | AACCACATCATATACTTGGTGTGGAATCGCCAGGACTaGTTCTTTAGGGCCTTGGCTGCCAAGTACTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: NHIIYLVWNRQD*FFRALAAKYCA Trigger: GGCACAGTACTTGGCAGCCAAGGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038913.16 |
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| CDS CAA 72 bp | ATATCTTCAAACTGCTCCACCCCTTCGGACACCTTCTaGAGGCAGCGATCAATCTCACCTTGGAGTTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: ISSNCSTPSDTF*RQRSISPWSLR Trigger: GCGCAAACTCCAAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAAGGGGTGGAGCAGTTTGAAGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000206287.2 |
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| CDS CAA 72 bp | TCAATCCGGTCCTGCTTATCCTTGTCGCCTTTCTTCTaGCGTGTCTGTACCGACAGTGACTCCACTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: SIRSCLSLSPFF*RVCTDSDSTSL Trigger: GAGTGAAGTGGAGTCACTGTCGGTACAGACACGCAAGAAGAAAGGCGACAAGGATAAGCAGGACCGGATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038913.16 |
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| CDS TCA 72 bp | AGTACTGTGCCTTGGTTCCCTCCAGATAGTAGAAGATaGAGAAGAGCGTCTCAGTTGACAGGCGCTGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: STVPWFPPDSRR*RRASQLTGAGR Trigger: TCTACCAGCGCCTGTCAACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAGGGAACCAAGGCACAGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038913.16 |
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| CDS CCA 72 bp | TGCATATTTAAGGTGTCAATGGTGTTCGTGAGCCACTaGCCAACTTCTTCCTTCTCCTTCTGGGCAGGATCC | + |
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Preference number: 6 (lower is better) Translates to: CIFKVSMVFVSH*PTSSFSFWAGS Trigger: GGATCCTGCCCAGAAGGAGAAGGAAGAAGTTGGCCAGTGGCTCACGAACACCATTGACACCTTAAATATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000135977.8 |
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| CDS CCA 72 bp | AACTCATCTGTGATGGTCTTAGGCTCCTCGTGCCTCTaGAACCACATCATATACTTGGTGTGGAATCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: NSSVMVLGSSCL*NHIIYLVWNRQ Trigger: CTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCACAGATGAGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000160200.2 |
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| CDS GCA 72 bp | GACAGTGACTCCACTTCACTCTCAAACTGGTCCACCTaGATATTTAAGGTGTCAATGGTGTTCGTGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: DSDSTSLSNWST*IFKVSMVFVSH Trigger: GTGGCTCACGAACACCATTGACACCTTAAATATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000135977.8 |
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| CDS CAA 90 bp | TGCGTCTCAATGAGCTTGCGGTTTTCAATAAGCTGCCTTTTGTCCTaGATCTCATTTGATGCTACCCATGTCTTGATCTGGTCCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CVSMSLRFSISCLLS*ISFDATHVLIWSLS Trigger: GCTGAGGGACCAGATCAAGACATGGGTAGCATCAAATGAGATCAAGGACAAAAGGCAGCTTATTGAAAACCGCAAGCTCATTGAGACGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000206287.2 |
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| CDS GCA 72 bp | TGCTCAAACTCATCTGTGATGGTCTTAGGCTCCTCGTaGCTCTGGAACCACATCATATACTTGGTGTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: CSNSSVMVLGSS*LWNHIIYLVWN Trigger: ATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCACAGATGAGTTTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000160200.2 |
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| CDS CCA 72 bp | GTCTGTACCGACAGTGACTCCACTTCACTCTCAAACTaGTCCACCTGCATATTTAAGGTGTCAATGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VCTDSDSTSLSN*STCIFKVSMVF Trigger: GAACACCATTGACACCTTAAATATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000135977.8 |
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| CDS CCA 72 bp | TCCTTGATCTCATTTGATGCTACCCATGTCTTGATCTaGTCCCTCAGCCGTTGTAGCTTCTTAATCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLISFDATHVLI*SLSRCSFLISF Trigger: GAAGGAGATTAAGAAGCTACAACGGCTGAGGGACCAGATCAAGACATGGGTAGCATCAAATGAGATCAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000206287.2 |
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| CDS CAA 90 bp | TCCATTTGCGTCTCAATGAGCTTGCGGTTTTCAATAAGCTGCCTTTaGTCCTTGATCTCATTTGATGCTACCCATGTCTTGATCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SICVSMSLRFSISCL*SLISFDATHVLIWS Trigger: GGACCAGATCAAGACATGGGTAGCATCAAATGAGATCAAGGACAAAAGGCAGCTTATTGAAAACCGCAAGCTCATTGAGACGCAAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000206287.2 |
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| CDS GCA 72 bp | GTCAGCCTCATACTTTTCTTTCTGGTTCGCGTTGGCTaGATTGTGGAGCTTTTGCCAAATATCTTCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: VSLILFFLVRVG*IVELLPNIFKL Trigger: CAGTTTGAAGATATTTGGCAAAAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000206287.2 |
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| CDS CAA 72 bp | TTTAGGTCAGCCTCATACTTTTCTTTCTGGTTCGCGTaGGCTGCATTGTGGAGCTTTTGCCAAATATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FRSASYFSFWFA*AALWSFCQISS Trigger: TGAAGATATTTGGCAAAAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038913.16 ENSMUST00000206287.2 |
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| CDS CAA 72 bp | ATGAGCTTGCGGTTTTCAATAAGCTGCCTTTTGTCCTaGATCTCATTTGATGCTACCCATGTCTTGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MSLRFSISCLLS*ISFDATHVLIW Trigger: CCAGATCAAGACATGGGTAGCATCAAATGAGATCAAGGACAAAAGGCAGCTTATTGAAAACCGCAAGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000206287.2 |
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| CDS CAA 72 bp | GTCTCAATGAGCTTGCGGTTTTCAATAAGCTGCCTTTaGTCCTTGATCTCATTTGATGCTACCCATGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSMSLRFSISCL*SLISFDATHVL Trigger: CAAGACATGGGTAGCATCAAATGAGATCAAGGACAAAAGGCAGCTTATTGAAAACCGCAAGCTCATTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000206287.2 |
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| CDS CAA 72 bp | ACAACTTTGAACCGTTCCATTTGCGTCTCAATGAGCTaGCGGTTTTCAATAAGCTGCCTTTTGTCCTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: TTLNRSICVSMS*RFSISCLLSLI Trigger: GATCAAGGACAAAAGGCAGCTTATTGAAAACCGCAAGCTCATTGAGACGCAAATGGAACGGTTCAAAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038913.16 ENSMUST00000132344.8 ENSMUST00000206287.2 |
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