Pregenerated sensors for CNOT11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003135Ensembl transcript IDs: ENSMUST00000003219.14, ENSMUST00000161515.8, ENSMUST00000195567.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTaGTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGT | + |
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Preference number: 1 (lower is better) Translates to: PGSPLLCMCLDQPWY*LVGGSVFGSSQGSG Trigger: ACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 90 bp | GCCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATaGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: ARPGSPLLCMCLDQP*YCLVGGSVFGSSQG Trigger: CCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR TCA 90 bp | GGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGTTaGGAACACTGGTCTTCCTATGGGTTGGTCCTCCCCTTCAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: GWWLSLRELPGVGFS*EHWSSYGLVLPFSF Trigger: GAAGCTGAAGGGGAGGACCAACCCATAGGAAGACCAGTGTTCTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 90 bp | TTCTCCCAGAGGCCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTaGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGA | + |
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Preference number: 1 (lower is better) Translates to: FSQRPDQAALCCVCA*ISHGTAWLVAQSSG Trigger: TCCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGGCCTCTGGGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR GCA 90 bp | AGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGGCAGCCCTCTaGTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: RIECIFSQRPDQAAL*CVCAWISHGTAWLV Trigger: CACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR GCA 90 bp | GCCAGGAACACTGTTGTCAGAAATGTGCATCCTTGTTTCACACCTTaGTTACTAAGAGCCACGCTCACCGTAAATTCTCAGCGTCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: ARNTVVRNVHPCFTP*LLRATLTVNSQRLH Trigger: GTGAAGACGCTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATGCACATTTCTGACAACAGTGTTCCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR GCA 90 bp | ATTTTGTGTTGGGCTGTGGCCATAGCTAACCTGAGCTACAAGACATaGCTATCAGCTGTGGAGCTTGTTGCCCACAGTAAGTCTTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: ILCWAVAIANLSYKT*LSAVELVAHSKSLK Trigger: TTTCAAAGACTTACTGTGGGCAACAAGCTCCACAGCTGATAGGCATGTCTTGTAGCTCAGGTTAGCTATGGCCACAGCCCAACACAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 90 bp | CTGTTAGGAGATTGTAATTGTACAGTAAGACAAAATCACCAAGCTTaGCTTCCTTTAAGCCTTGCCGGATGTGGGAGAACAGATTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LLGDCNCTVRQNHQA*LPLSLAGCGRTDSV Trigger: GACAGAATCTGTTCTCCCACATCCGGCAAGGCTTAAAGGAAGCCAAGCTTGGTGATTTTGTCTTACTGTACAATTACAATCTCCTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CAA 90 bp | CTTCTCCCAGAGGCCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTaGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGG | + |
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Preference number: 2 (lower is better) Translates to: LLPEARPGSPLLCMC*DQPWYCLVGGSVFG Trigger: CCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGGCCTCTGGGAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTACTGGCAGAGTGCCCATaGTTGTCAGTGGGCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: WYCLVGGSVFGSSQGSGLLAECP*LSVGQE Trigger: TTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAG...TAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGGCAGCCCGCCCATGCTTGTCAGTaGGCCAGGAACACTGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QVSKGSSASSPRGQTRQPAHACQ*ARNTVV Trigger: GACAACAGTGTTCCTGGCCCACTGACAAGCATGGGC...GGGCTGCCTGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGGCAGCCCAGGCAGAAGGATCTCTaGTTTCAAGGCCAGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: QVSKGSSASSPRGQTRQPRQKDL*FQGQPA Trigger: AGCAGGCTGGCCTTGAAATCAGAGATCCTTCTGCCT...GGGCTGCCTGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTCAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCACACTGTCCCAGGTACTaGCTCTTCTACCTCCTCACC | + |
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Preference number: 2 (lower is better) Translates to: RGLKSLKDRVHLLPEARPHCPRY*LFYLLT Trigger: GGTGAGGAGGTAGAAGAGTCAGTACCTGGGACAGTG...TGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTGAGGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCCTCAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGCCCATGCTTGTCAGTaGGCCAGGAACACTGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: RGLKSLKDRVHLLPEARPAHACQ*ARNTVV Trigger: GACAACAGTGTTCCTGGCCCACTGACAAGCATGGGC...TGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTGAGGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTCTGAGCTACAAGACATaGCTATCAGCTGTGGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: PDQAALCCVCAWISHGTALSYKT*LSAVEL Trigger: AAGCTCCACAGCTGATAGGCATGTCTTGTAGCTCAG...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CCA 90 bp | TGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGACACTGGTCTTCCTATaGGTTGGTCCTCCCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: CMCLDQPWYCLVGGSVFGTLVFL*VGPPLQ Trigger: CTGAAGGGGAGGACCAACCCATAGGAAGACCAGTGT...CCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCTTCATGGGCTGTTGTTaGCCCAGTGCCATCTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: LLCMCLDQPWYCLVGGSVFMGCC*PSAICK Trigger: TTTACAGATGGCACTGGGCCAACAACAGCCCATGAA...GACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGAGGGGGTCACTCCCACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTGAGAGAAGAATAAAATaGCAACTCTCGCAGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: VQRGSLPQGRKDYCFLFLERRIK*QLSQPG Trigger: GCCAGGCTGCGAGAGTTGGCATTTTATTCTTCTCTC...AAGGAACAAGAAACAATAATCCTTGCGCCCCTGTGGGAGTGACCCCCTCTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCGTCATTCTAAAACAGTaGTTTGTTCATGGGCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLCMCLDQPWYCLVGGSVVILKQ*FVHGLL Trigger: CAACAGCCCATGAACAAAGCACTGTTTTAGAATGAC...GACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGACGAAAGCAAATTCCTaGTTTTTCAGAAACCTACAG | + |
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Preference number: 2 (lower is better) Translates to: RPGSPLLCMCLDQPWYCLTKANS*FFRNLQ Trigger: CTGTAGGTTTCTGAAAAACCAGGAATTTGCTTTCGT...CAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CAA 90 bp | CTCTCTAGTTCAGAGGGGGTCACTCCCACAGGGGCGCAAGGATTATaGTTTCTTGTTCCTTCTCCACTGTTAGGAGATTGTAATTGTACA | + |
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Preference number: 2 (lower is better) Translates to: LSSSEGVTPTGAQGL*FLVPSPLLGDCNCT Trigger: TGTACAATTACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCCTGTGGGAGTGACCCCCTCTGAACTAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR TCA 90 bp | CATCCTTGTTTCACACCTTGCTTACTAAGAGCCACGCTCACCGTAAATTCTCAGTTCACTCACTCTCACTaGCCATGCTTCACACTAGAA | + |
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Preference number: 2 (lower is better) Translates to: HPCFTPCLLRATLTVNSQFTHSH*PCFTLE Trigger: TTCTAGTGTGAAGCATGGTCAGTGAGAGTGAGTGAA...CTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CAA 90 bp | AAGACATGCCTATCAGCTGTGGAGCTTGTTGCCCACAGTAAGTCTTaGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATGGGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: KTCLSAVELVAHSKS*KLVILKQCFVHGLL Trigger: CAACAGCCCATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAACAAGCTCCACAGCTGATAGGCATGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTGGTATACACCTTTAATCACAGCATGCAGAGGCAGAAGGATCTCTGATTTCCTGTTGTCAGAAATGTaGATCCTTGTTTCACACCTT | + |
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Preference number: 2 (lower is better) Translates to: WWYTPLITACRGRRISDFLLSEM*ILVSHL Trigger: AAGGTGTGAAACAAGGATGCACATTTCTGACAACAG...GAAATCAGAGATCCTTCTGCCTCTGCATGCTGTGATTAAAGGTGTATACCACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGTATACACCTTTAATCACAGCATGCAGAGGCAGAAGGATCTCTGATTTCACGAAAGCAAATTCCTaGTTTTTCAGAAACCTACAG | + |
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Preference number: 2 (lower is better) Translates to: WWYTPLITACRGRRISDFTKANS*FFRNLQ Trigger: CTGTAGGTTTCTGAAAAACCAGGAATTTGCTTTCGT...GAAATCAGAGATCCTTCTGCCTCTGCATGCTGTGATTAAAGGTGTATACCACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 72 bp | GTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTaGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGG | + |
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Preference number: 3 (lower is better) Translates to: VYVLGSAMVLLG*WLSLRELPGVG Trigger: CCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR TCA 72 bp | CTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGTTaGGAACACTGGTCTTCCTATGGGTTGGTCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: LSLRELPGVGFS*EHWSSYGLVLP Trigger: GGGGAGGACCAACCCATAGGAAGACCAGTGTTCTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 72 bp | GGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATaGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: GSPLLCMCLDQP*YCLVGGSVFGS Trigger: GCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 72 bp | AGGCCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTaGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: RPDQAALCCVCA*ISHGTAWLVAQ Trigger: CTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGGCAGCCCTGGTCTTCCTATGGGTaGGTCCTCCCCTTCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: QVSKGSSASSPRGQTRQPWSSYG*VLPFSF Trigger: GAAGCTGAAGGGGAGGACCAACCCATAGGAAGACCA...GGGCTGCCTGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR GCA 72 bp | TGCATCTTCTCCCAGAGGCCAGACCAGGCAGCCCTCTaGTGTGTATGTGCTTGGATCAGCCATGGTACTGCT | + |
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Preference number: 3 (lower is better) Translates to: CIFSQRPDQAAL*CVCAWISHGTA Trigger: AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGGCCTCTGGGAGAAGATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 72 bp | TATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTaGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: YVLGSAMVLLGW*LSLRELPGVGF Trigger: AAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 72 bp | TGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTaGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: CCVCAWISHGTA*LVAQSSGAPRG Trigger: ACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAACAAAATCACCAAGCTaGGCTTCCTTTAAGCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: WYCLVGGSVFGSSQGSGLTKSPS*ASFKPC Trigger: GCAAGGCTTAAAGGAAGCCAAGCTTGGTGATTTTGT...TAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR GCA 72 bp | TGGGCTGTGGCCATAGCTAACCTGAGCTACAAGACATaGCTATCAGCTGTGGAGCTTGTTGCCCACAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: WAVAIANLSYKT*LSAVELVAHSK Trigger: CTTACTGTGGGCAACAAGCTCCACAGCTGATAGGCATGTCTTGTAGCTCAGGTTAGCTATGGCCACAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CAA 90 bp | CAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACACTGAACTATTCATATGGATaGTCATCAGCAAGAGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: QLSQPGRVPMLVSGPGTLNYSYG*SSAREL Trigger: TAGCTCTCTTGCTGATGACAATCCATATGAATAGTT...CAGTGTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGTGCCAGCTCGTATTaGTCCTTAAGACCACAAAAA | + |
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Preference number: 3 (lower is better) Translates to: PDQAALCCVCAWISHGTACASSY*SLRPQK Trigger: TTTTTGTGGTCTTAAGGACAAATACGAGCTGGCACA...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCACAAAATCACCAAGCTaGGCTTCCTTTAAGCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: LLCMCLDQPWYCLVGGSVTKSPS*ASFKPC Trigger: GCAAGGCTTAAAGGAAGCCAAGCTTGGTGATTTTGT...GACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CAA 90 bp | TGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGTGTGCCAGCTCGTATTaGTCCTTAAGACCACAAAAA | + |
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Preference number: 3 (lower is better) Translates to: CMCLDQPWYCLVGGSVFGCASSY*SLRPQK Trigger: TTTTTGTGGTCTTAAGGACAAATACGAGCTGGCACA...CCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 72 bp | CCTCCTCACCAAACAGGCATCCTGGGTATACATTTCTaGTGTGCCAGCTCGTATTTGTCCTTAAGACCACAA | + |
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Preference number: 3 (lower is better) Translates to: PPHQTGILGIHF*CASSYLSLRPQ Trigger: TTGTGGTCTTAAGGACAAATACGAGCTGGCACACCAGAAATGTATACCCAGGATGCCTGTTTGGTGAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 72 bp | TCGGGTTTAGTTGAGAACACTGGTCTTCCTATGGGTTaGTCCTCCCCTTCAGCTTCTTCAATCCTTCCTCTA | + |
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Preference number: 3 (lower is better) Translates to: SGLVENTGLPMG*SSPSASSILPL Trigger: TAGAGGAAGGATTGAAGAAGCTGAAGGGGAGGACCAACCCATAGGAAGACCAGTGTTCTCAACTAAACCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR GCA 72 bp | ACTGTTGTCAGAAATGTGCATCCTTGTTTCACACCTTaGTTACTAAGAGCCACGCTCACCGTAAATTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: TVVRNVHPCFTP*LLRATLTVNSQ Trigger: CTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATGCACATTTCTGACAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR GCA 72 bp | CACAGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTaGTTTGTTCATGGGCTGTTGTTGGCCCAGTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: HSKSLKLVILKQ*FVHGLLLAQCH Trigger: ATGGCACTGGGCCAACAACAGCCCATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR CCA 72 bp | GATTGTAATTGTACAGTAAGACAAAATCACCAAGCTTaGCTTCCTTTAAGCCTTGCCGGATGTGGGAGAACA | + |
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Preference number: 3 (lower is better) Translates to: DCNCTVRQNHQA*LPLSLAGCGRT Trigger: TGTTCTCCCACATCCGGCAAGGCTTAAAGGAAGCCAAGCTTGGTGATTTTGTCTTACTGTACAATTACAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGCCCACAGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATGGGGCGCAAGGATTATaGTTTCTTGTTCCTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VAHSKSLKLVILKQCFVHGAQGL*FLVPSP Trigger: TGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCC...ATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATGGGCTGTTGCAGAAATGTGCATCCTaGTTTCACACCTTGCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: SKSLKLVILKQCFVHGLLQKCAS*FHTLLT Trigger: AGTAAGCAAGGTGTGAAACAAGGATGCACATTTCTG...CAACAGCCCATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCCCACAGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATCAGAAATGTGCATCCTaGTTTCACACCTTGCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: VAHSKSLKLVILKQCFVHQKCAS*FHTLLT Trigger: AGTAAGCAAGGTGTGAAACAAGGATGCACATTTCTG...ATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCCCACAGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATCCAATCCAAATACAGTaGAACAATAGAAAGGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VAHSKSLKLVILKQCFVHPIQIQ*NNRKGS Trigger: ACTTCCCTTTCTATTGTTCAACTGTATTTGGATTGG...ATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATGGATTGTCATCAGCAAGAGAGCTAAAATAAACATTTCTCCCAAGTTCTCACCAATCCAAATACAGTaGAACAATAGAAAGGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IWIVISKRAKINISPKFSPIQIQ*NNRKGS Trigger: ACTTCCCTTTCTATTGTTCAACTGTATTTGGATTGG...TGAGAACTTGGGAGAAATGTTTATTTTAGCTCTCTTGCTGATGACAATCCATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | TGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAAGCGCCGTGAGGCGCTaGGCCGCGCTAGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WYCLVGGSVFGSSQGSGLSAVRR*AALGSR Trigger: CCTGCTGCCTAGCGCGGCGCAGCGCCTCACGGCGCT...TAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACGCAGGTGCGCGAAGCTaGCCGCGAACGGGTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MPTLAAWQSAHACQWARNAGARS*PRTGWR Trigger: CCGCCAACCCGTTCGCGGCCAGCTTCGCGCACCTGC...GTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTAGCGCCGTGAGGCGCTaGGCCGCGCTAGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDQAALCCVCAWISHGTASAVRR*AALGSR Trigger: CCTGCTGCCTAGCGCGGCGCAGCGCCTCACGGCGCT...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACACTGGCCGGGTTGAGCAGGTaGGCGAAGCTGGCCGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLSQPGRVPMLVSGPGTLAGLSR*AKLAAN Trigger: GTTCGCGGCCAGCTTCGCGCACCTGCTCAACCCGGC...CAGTGTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGTTGAGGCAGGTGCGCGAAGCTaGCCGCGAACGGGTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CLVGGSVFGSSQGSGLVEAGARS*PRTGWR Trigger: CCGCCAACCCGTTCGCGGCCAGCTTCGCGCACCTGC...CTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACCCTCCCGCGCCCCTCTaGGATCCGCTGAGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MPTLAAWQSAHACQWARNPPAPL*DPLRRE Trigger: TTCTCTCCTCAGCGGATCCCAGAGGGGCGCGGGAGG...GTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | TGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTACCCTCTGGGATCCGCTaGGGAGAGAAGCCGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WYCLVGGSVFGSSQGSGLPSGIR*GEKPAR Trigger: TCTGGCCGGCTTCTCTCCTCAGCGGATCCCAGAGGG...TAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGTTGAGCCCTCTGGGATCCGCTaGGGAGAGAAGCCGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLVGGSVFGSSQGSGLVEPSGIR*GEKPAR Trigger: TCTGGCCGGCTTCTCTCCTCAGCGGATCCCAGAGGG...CTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACACTGCCGGGTCTGGGTCACTaGGGATGCTTGGGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLSQPGRVPMLVSGPGTLPGLGH*GCLGSW Trigger: CCAGCTTCCCAAGCATCCTCAGTGACCCAGACCCGG...CAGTGTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | TGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGGCAGCAGGTCCGGCTaGTGCAGCAGCATCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WYCLVGGSVFGSSQGSGLGSRSG*CSSITS Trigger: GCTGGTGATGCTGCTGCAGCAGCCGGACCTGCTGCC...TAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACACTGAGTGGTGGAAGGCGGTaGACAGGCCCTCGAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLSQPGRVPMLVSGPGTLSGGRR*TGPRRC Trigger: GCACCTTCGAGGGCCTGTCCACCGCCTTCCACCACT...CAGTGTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACACTGAGTGGTCGGCCTTGCTaGAGTAGTGGTGGAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLSQPGRVPMLVSGPGTLSGRPC*SSGGRR Trigger: CCGCCTTCCACCACTACTTCAGCAAGGCCGACCACT...CAGTGTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGTCCCAGGTACTGACTCTTCTACCTCCTCACCAAACAGGCATCCTGGGTACAGGCCCTCGAAGGTaGTGCCGCCGCCCGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSQVLTLLPPHQTGILGTGPRR*CRRPPP Trigger: AGGAGGCGGGCGGCGGCAGCACCTTCGAGGGCCTGT...ACCCAGGATGCCTGTTTGGTGAGGAGGTAGAAGAGTCAGTACCTGGGACAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGTTGAGAGTGGTGGAAGGCGGTaGACAGGCCCTCGAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLVGGSVFGSSQGSGLVESGGRR*TGPRRC Trigger: GCACCTTCGAGGGCCTGTCCACCGCCTTCCACCACT...CTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACTCATCCTCACAGATGTaGAGAGGGGGTGGTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MPTLAAWQSAHACQWARNSSSQM*RGGGGR Trigger: CCGCCCACCACCCCCTCTCCACATCTGTGAGGATGA...GTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | AGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGCCTCCCGCGCCCCTCTaGGATCCGCTGAGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPGSPLLCMCLDQPWYCLPPAPL*DPLRRE Trigger: TTCTCTCCTCAGCGGATCCCAGAGGGGCGCGGGAGG...CAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACGATGTGGAGAGGGGGTaGTGGGCGGATAAACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MPTLAAWQSAHACQWARNDVERG*WADKLW Trigger: CCAGAGTTTATCCGCCCACCACCCCCTCTCCACATC...GTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACAGGAGCTGTGTCTGTTaGGGAGACGACAGGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MPTLAAWQSAHACQWARNRSCVC*GDDRGL Trigger: AAGCCCCCTGTCGTCTCCCCAACAGACACAGCTCCT...GTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGTCCCAGGTACTGACTCTTCTACCTCCTCACCAAACAGGCATCCTGGGTCGGCGAGCGGCTCGGTaGGGTACATCTCCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSQVLTLLPPHQTGILGRRAAR*GTSPRA Trigger: TGCTCTGGGAGATGTACCGCACCGAGCCGCTCGCCG...ACCCAGGATGCCTGTTTGGTGAGGAGGTAGAAGAGTCAGTACCTGGGACAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGTTGAGGGCTTTGCTCTGGGTTaGCAGCTCAGACTGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLVGGSVFGSSQGSGLVEGFALG*QLRLTL Trigger: GAGCGTCAGTCTGAGCTGCCAACCCAGAGCAAAGCC...CTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | TGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGATGTGGAGAGGGGGTaGTGGGCGGATAAACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WYCLVGGSVFGSSQGSGLDVERG*WADKLW Trigger: CCAGAGTTTATCCGCCCACCACCCCCTCTCCACATC...TAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCCCGCCTCCTCCGAGATaGTGCTCAGCAGGCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCMCLDQPWYCLVGGSVPPPPR*CSAGSR Trigger: TCTCGAGCCTGCTGAGCATCATCTCGGAGGAGGCGG...GACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACCTCCGTGATCTGGCTTaGCTGCATCAGTTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MPTLAAWQSAHACQWARNLRDLA*LHQFQQ Trigger: CTGCTGAAACTGATGCAGTCAAGCCAGATCACGGAG...GTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGAGGGGGTCACTCCCACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTCCGCCTCCTCCGAGATaGTGCTCAGCAGGCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQRGSLPQGRKDYCFLFLPPPPR*CSAGSR Trigger: TCTCGAGCCTGCTGAGCATCATCTCGGAGGAGGCGG...AAGGAACAAGAAACAATAATCCTTGCGCCCCTGTGGGAGTGACCCCCTCTGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTCTGCCAGGGCTAACTaGAGGCCGCTAATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PDQAALCCVCAWISHGTASARAN*RPLMST Trigger: TGTGGACATTAGCGGCCTTCAGTTAGCCCTGGCAGA...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTTGGGAAGCTGGCTTTaGTCTGGGTTGGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDQAALCCVCAWISHGTALGSWL*SGLAAQ Trigger: CTGAGCTGCCAACCCAGAGCAAAGCCAGCTTCCCAA...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTCTCCACTGTTAGGAGATTGTTGGCCGCGAACGGGTTaGCGGCGAGCGGCTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGAQGLLFLVPSPLLGDCWPRTG*RRAARC Trigger: GCACCGAGCCGCTCGCCGCCAACCCGTTCGCGGCCA...ACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGTTGAGGTCACTGAGGATGCTTaGGAAGCTGGCTTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLVGGSVFGSSQGSGLVEVTEDA*EAGFAL Trigger: CAGAGCAAAGCCAGCTTCCCAAGCATCCTCAGTGAC...CTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | TGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTATGTCAAATCCAGAGTTaGACGAGTCCGGGTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WYCLVGGSVFGSSQGSGLCQIQS*TSPGLG Trigger: ACCCAGACCCGGACTCGTCCAACTCTGGATTTGACA...TAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCGTGGAGAGGGGGTGGTaGGCGGATAAACTCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLCMCLDQPWYCLVGGSVVERGW*ADKLWS Trigger: CGACCAGAGTTTATCCGCCCACCACCCCCTCTCCAC...GACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTCTCCACTGTTAGGAGATTGTACAGGCCCTCGAAGGTaGTGCCGCCGCCCGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGAQGLLFLVPSPLLGDCTGPRR*CRRPPP Trigger: AGGAGGCGGGCGGCGGCAGCACCTTCGAGGGCCTGT...ACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGGCAGCCCTTTGAACAGTTCCCTTaGGGGTGCCAGCATGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVSKGSSASSPRGQTRQPFEQFP*GCQHEL Trigger: CAGCTCATGCTGGCACCCCCAAGGGAACTGTTCAAA...GGGCTGCCTGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGTCAAATCCAGAGTTaGACGAGTCCGGGTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PDQAALCCVCAWISHGTACQIQS*TSPGLG Trigger: ACCCAGACCCGGACTCGTCCAACTCTGGATTTGACA...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | TGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGGTGCCAGCATGAGCTaGGAGAGGAAAAACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WYCLVGGSVFGSSQGSGLGASMS*ERKNFS Trigger: AGAAAAGTTTTTCCTCTCCCAGCTCATGCTGGCACC...TAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| 3UTR CAA 72 bp | AATGCCAACTCTCGCAGCCTGGCAGAGTGCCCATGCTaGTCAGTGGGCCAGGAACACTGTTGTCAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: NANSRSLAECPC*SVGQEHCCQKC Trigger: ACATTTCTGACAACAGTGTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | TGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAAGGACATGTCCATGTTaGCCAGGACAGAGAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: WYCLVGGSVFGSSQGSGLRTCPC*PGQRNT Trigger: AGTATTTCTCTGTCCTGGTCAACATGGACATGTCCT...TAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTGGTGCCAGCATGAGCTaGGAGAGGAAAAACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PDQAALCCVCAWISHGTAGASMS*ERKNFS Trigger: AGAAAAGTTTTTCCTCTCCCAGCTCATGCTGGCACC...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCCTCAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGTCACTGAGGATGCTTaGGAAGCTGGCTTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGLKSLKDRVHLLPEARPVTEDA*EAGFAL Trigger: CAGAGCAAAGCCAGCTTCCCAAGCATCCTCAGTGAC...TGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTGAGGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACTCTCGCAGCCTGGCAGAGTGCCCATGCTTGTCAGTGGGCCAGGAACAAATACTCCGTGATCTaGCTTGACTGCATCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MPTLAAWQSAHACQWARNKYSVI*LDCISF Trigger: GAAACTGATGCAGTCAAGCCAGATCACGGAGTATTT...GTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGTATACACCTTTAATCACAGCATGCAGAGGCAGAAGGATCTCTGATTTCCCGGGTCTGGGTCACTaGGGATGCTTGGGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WWYTPLITACRGRRISDFPGLGH*GCLGSW Trigger: CCAGCTTCCCAAGCATCCTCAGTGACCCAGACCCGG...GAAATCAGAGATCCTTCTGCCTCTGCATGCTGTGATTAAAGGTGTATACCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCGATCCGAGAGGCAACTaGGCTGTCAAATCCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCMCLDQPWYCLVGGSVDPRGN*AVKSRV Trigger: AACTCTGGATTTGACAGCTCAGTTGCCTCTCGGATC...GACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTCTCCACTGTTAGGAGATTGTAGCAGGTCCGGCTGCTaGAGCAGCATCACCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TGAQGLLFLVPSPLLGDCSRSGC*SSITST Trigger: GGTGCTGGTGATGCTGCTGCAGCAGCCGGACCTGCT...ACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTCCATCAAGGCAATCTaGCGAGGTGTCTTTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PDQAALCCVCAWISHGTASIKAI*RGVFLN Trigger: GTTCAAAAAGACACCTCGCCAGATTGCCTTGATGGA...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CATCCTTGTTTCACACCTTGCTTACTAAGAGCCACGCTCACCGTAAATTCTCAGGTGGAGAGGGGGTGGTaGGCGGATAAACTCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HPCFTPCLLRATLTVNSQVERGW*ADKLWS Trigger: CGACCAGAGTTTATCCGCCCACCACCCCCTCTCCAC...CTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGAGGGGGTCACTCCCACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTCATGCTCGGGTTCTGTaGGATTTAGCCAGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQRGSLPQGRKDYCFLFLHARVL*DLARPV Trigger: AACTGGCCTGGCTAAATCCCACAGAACCCGAGCATG...AAGGAACAAGAAACAATAATCCTTGCGCCCCTGTGGGAGTGACCCCCTCTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTGAGGAAAAACTTTTCTaGTGGAGTTATAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDQAALCCVCAWISHGTAEEKLF*WSYRRQ Trigger: CTGCCTCCTATAACTCCACCAGAAAAGTTTTTCCTC...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTCTCCACTGTTAGGAGATTGTTCATCCTCACAGATGTaGAGAGGGGGTGGTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TGAQGLLFLVPSPLLGDCSSSQM*RGGGGR Trigger: CCGCCCACCACCCCCTCTCCACATCTGTGAGGATGA...ACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | AGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGAGGAAAAACTTTTCTaGTGGAGTTATAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPGSPLLCMCLDQPWYCLEEKLF*WSYRRQ Trigger: CTGCCTCCTATAACTCCACCAGAAAAGTTTTTCCTC...CAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTGTTTCACACCTTGCTTACTAAGAGCCACGCTCACCGTAAATTCTCAGCGTTTGAACAGTTCCCTTaGGGGTGCCAGCATGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFHTLLTKSHAHRKFSAFEQFP*GCQHEL Trigger: CAGCTCATGCTGGCACCCCCAAGGGAACTGTTCAAA...CGCTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCCTCAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCATCCATCAAGGCAATCTaGCGAGGTGTCTTTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLKSLKDRVHLLPEARPSIKAI*RGVFLN Trigger: GTTCAAAAAGACACCTCGCCAGATTGCCTTGATGGA...TGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTGAGGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTCTCCACTGTTAGGAGATTGTGGCTTTGCTCTGGGTTaGCAGCTCAGACTGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGAQGLLFLVPSPLLGDCGFALG*QLRLTL Trigger: GAGCGTCAGTCTGAGCTGCCAACCCAGAGCAAAGCC...ACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGGCAGCCCTTACGGATCAAAGACTaGAGAAACACACACACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVSKGSSASSPRGQTRQPLRIKD*RNTHTR Trigger: TCTTGTGTGTGTGTTTCTCCAGTCTTTGATCCGTAA...GGGCTGCCTGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTTACGGATCAAAGACTaGAGAAACACACACACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDQAALCCVCAWISHGTALRIKD*RNTHTR Trigger: TCTTGTGTGTGTGTTTCTCCAGTCTTTGATCCGTAA...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| 3UTR CAA 72 bp | AGAGTGCCCATGCTTGTCAGTGGGCCAGGAACACTGTaGTCAGAAATGTGCATCCTTGTTTCACACCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVPMLVSGPGTL*SEMCILVSHLA Trigger: AGCAAGGTGTGAAACAAGGATGCACATTTCTGACAACAGTGTTCCTGGCCCACTGACAAGCATGGGCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| 3UTR CAA 72 bp | TCAGAGGGGGTCACTCCCACAGGGGCGCAAGGATTATaGTTTCTTGTTCCTTCTCCACTGTTAGGAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGVTPTGAQGL*FLVPSPLLGDC Trigger: ACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCCTGTGGGAGTGACCCCCTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTCTCCACTGTTAGGAGATTGTTCTGCCAGGGCTAACTaGAGGCCGCTAATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TGAQGLLFLVPSPLLGDCSARAN*RPLMST Trigger: TGTGGACATTAGCGGCCTTCAGTTAGCCCTGGCAGA...ACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATGGGCTGTTGCGGCGAGCGGCTCGGTaGGGTACATCTCCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKSLKLVILKQCFVHGLLRRAAR*GTSPRA Trigger: TGCTCTGGGAGATGTACCGCACCGAGCCGCTCGCCG...CAACAGCCCATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | ATATGGATTGTCATCAGCAAGAGAGCTAAAATAAACATTTCTCCCAAGTTCTCAGCCGGGTTGAGCAGGTaGGCGAAGCTGGCCGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IWIVISKRAKINISPKFSAGLSR*AKLAAN Trigger: GTTCGCGGCCAGCTTCGCGCACCTGCTCAACCCGGC...TGAGAACTTGGGAGAAATGTTTATTTTAGCTCTCTTGCTGATGACAATCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCCTCAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAAAATACTCCGTGATCTaGCTTGACTGCATCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLKSLKDRVHLLPEARPKYSVI*LDCISF Trigger: GAAACTGATGCAGTCAAGCCAGATCACGGAGTATTT...TGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTGAGGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGTATACACCTTTAATCACAGCATGCAGAGGCAGAAGGATCTCTGATTTCCTCCGTGATCTGGCTTaGCTGCATCAGTTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WWYTPLITACRGRRISDFLRDLA*LHQFQQ Trigger: CTGCTGAAACTGATGCAGTCAAGCCAGATCACGGAG...GAAATCAGAGATCCTTCTGCCTCTGCATGCTGTGATTAAAGGTGTATACCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCCCACAGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATAGCAGGTCCGGCTGCTaGAGCAGCATCACCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VAHSKSLKLVILKQCFVHSRSGC*SSITST Trigger: GGTGCTGGTGATGCTGCTGCAGCAGCCGGACCTGCT...ATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | TGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGGAAAAACTTTTCTGGTaGAGTTATAGGAGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CMCLDQPWYCLVGGSVFGEKLFW*SYRRQE Trigger: TTCCTGCCTCCTATAACTCCACCAGAAAAGTTTTTC...CCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCGAAAAACTTTTCTGGTaGAGTTATAGGAGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCMCLDQPWYCLVGGSVEKLFW*SYRRQE Trigger: TTCCTGCCTCCTATAACTCCACCAGAAAAGTTTTTC...GACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGTATACACCTTTAATCACAGCATGCAGAGGCAGAAGGATCTCTGATTTCGATCCGAGAGGCAACTaGGCTGTCAAATCCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WWYTPLITACRGRRISDFDPRGN*AVKSRV Trigger: AACTCTGGATTTGACAGCTCAGTTGCCTCTCGGATC...GAAATCAGAGATCCTTCTGCCTCTGCATGCTGTGATTAAAGGTGTATACCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCTCAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCATTGGATATGTATAGGTaGATAAATTCAGGAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLKSLKDRVHLLPEARPLDMYR*INSGGR Trigger: CCTACCTCCTGAATTTATTCACCTATACATATCCAA...TGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTGAGGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGTATACACCTTTAATCACAGCATGCAGAGGCAGAAGGATCTCTGATTTCCAGAGAAATACTCCGTaGTCTGGCTTGACTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WWYTPLITACRGRRISDFQRNTP*SGLTAS Trigger: TGATGCAGTCAAGCCAGATCACGGAGTATTTCTCTG...GAAATCAGAGATCCTTCTGCCTCTGCATGCTGTGATTAAAGGTGTATACCACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTTGTTTCACACCTTGCTTACTAAGAGCCACGCTCACCGTAAATTCTCAGAGGACATGTCCATGTTaGCCAGGACAGAGAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: HPCFTPCLLRATLTVNSQRTCPC*PGQRNT Trigger: AGTATTTCTCTGTCCTGGTCAACATGGACATGTCCT...CTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCCCACAGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATTTGGGGGTGCCAGCATaGGCTGGGAGAGGAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VAHSKSLKLVILKQCFVHLGVPA*AGRGKT Trigger: AGTTTTTCCTCTCCCAGCTCATGCTGGCACCCCCAA...ATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCCCACAGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATTTGGGAAGCTGGCTTTaGTCTGGGTTGGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAHSKSLKLVILKQCFVHLGSWL*SGLAAQ Trigger: CTGAGCTGCCAACCCAGAGCAAAGCCAGCTTCCCAA...ATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGATTGTCATCAGCAAGAGAGCTAAAATAAACATTTCTCCCAAGTTCTCAAGGAGCTGTGTCTGTTaGGGAGACGACAGGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IWIVISKRAKINISPKFSRSCVC*GDDRGL Trigger: AAGCCCCCTGTCGTCTCCCCAACAGACACAGCTCCT...TGAGAACTTGGGAGAAATGTTTATTTTAGCTCTCTTGCTGATGACAATCCATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| 3UTR CAA 72 bp | CACTGTTGTCAGAAATGTGCATCCTTGTTTCACACCTaGCTTACTAAGAGCCACGCTCACCGTAAATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCCQKCASLFHT*LTKSHAHRKFS Trigger: TGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATGCACATTTCTGACAACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | ATATGGATTGTCATCAGCAAGAGAGCTAAAATAAACATTTCTCCCAAGTTCTCATTGGGGGTGCCAGCATaGGCTGGGAGAGGAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IWIVISKRAKINISPKFSLGVPA*AGRGKT Trigger: AGTTTTTCCTCTCCCAGCTCATGCTGGCACCCCCAA...TGAGAACTTGGGAGAAATGTTTATTTTAGCTCTCTTGCTGATGACAATCCATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATGGGCTGTTGCATGCTCGGGTTCTGTaGGATTTAGCCAGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKSLKLVILKQCFVHGLLHARVL*DLARPV Trigger: AACTGGCCTGGCTAAATCCCACAGAACCCGAGCATG...CAACAGCCCATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCCCACAGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATCAGAGAAATACTCCGTaGTCTGGCTTGACTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VAHSKSLKLVILKQCFVHQRNTP*SGLTAS Trigger: TGATGCAGTCAAGCCAGATCACGGAGTATTTCTCTG...ATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATGGGCTGTTGTTGGATATGTATAGGTaGATAAATTCAGGAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKSLKLVILKQCFVHGLLLDMYR*INSGGR Trigger: CCTACCTCCTGAATTTATTCACCTATACATATCCAA...CAACAGCCCATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS GCA 90 bp | TCGGGCTCCTGGCCGCCGCGGGCGGGCGGCGCCGGGTTGAGCAGGTaGGCGAAGCTGGCCGCGAACGGGTTGGCGGCGAGCGGCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGSWPPRAGGAGLSR*AKLAANGLAASGSV Trigger: CACCGAGCCGCTCGCCGCCAACCCGTTCGCGGCCAGCTTCGCGCACCTGCTCAACCCGGCGCCGCCCGCCCGCGGCGGCCAGGAGCCCGA 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS TCA 90 bp | GCCGCTCCGGAACGCCGCTGCCTCCCGCGCCCCTCTGGGATCCGCTaGGGAGAGAAGCCGGCCAGACGCCGTGCTCGCCCCGCCGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAPERRCLPRPSGIR*GEKPARRRARPAAG Trigger: CCCGGCGGCGGGGCGAGCACGGCGTCTGGCCGGCTTCTCTCCTCAGCGGATCCCAGAGGGGCGCGGGAGGCAGCGGCGTTCCGGAGCGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | AGCCCGCCGGGCCGCTCCGGAACGCCGCTGCCTCCCGCGCCCCTCTaGGATCCGCTGAGGAGAGAAGCCGGCCAGACGCCGTGCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPGRSGTPLPPAPL*DPLRREAGQTPCSP Trigger: GGGCGAGCACGGCGTCTGGCCGGCTTCTCTCCTCAGCGGATCCCAGAGGGGCGCGGGAGGCAGCGGCGTTCCGGAGCGGCCCGGCGGGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | CTCCTTCGGGGTCAGGCTCATCCTGCCCGCGGGGCCTCCAATCCCTaGCCCAGGGCCGCCTGCTCCGCCTCGGCCTCCGCTCGAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LLRGQAHPARGASNP*PRAACSASASARAR Trigger: GCGGGCTCGAGCGGAGGCCGAGGCGGAGCAGGCGGCCCTGGGCCAGGGATTGGAGGCCCCGCGGGCAGGATGAGCCTGACCCCGAAGGAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | GTTATAGGAGGCAGGAACCCTGAGAGCGGGGGCCGGTCGGGCTCCTaGCCGCCGCGGGCGGGCGGCGCCGGGTTGAGCAGGTGCGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VIGGRNPESGGRSGS*PPRAGGAGLSRCAK Trigger: CTTCGCGCACCTGCTCAACCCGGCGCCGCCCGCCCGCGGCGGCCAGGAGCCCGACCGGCCCCCGCTCTCAGGGTTCCTGCCTCCTATAAC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS GCA 90 bp | AGCGCCGTGAGGCGCTGCGCCGCGCTAGGCAGCAGGTCCGGCTGCTaGAGCAGCATCACCAGCACCGAGCCCAGGCGGAAGTGGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAVRRCAALGSRSGC*SSITSTEPRRKWSA Trigger: GGCCGACCACTTCCGCCTGGGCTCGGTGCTGGTGATGCTGCTGCAGCAGCCGGACCTGCTGCCTAGCGCGGCGCAGCGCCTCACGGCGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS TCA 90 bp | TGGACAGGCCCTCGAAGGTGCTGCCGCCGCCCGCCTCCTCCGAGATaGTGCTCAGCAGGCTCGAGAGCTCCTTCGGGGTCAGGCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: WTGPRRCCRRPPPPR*CSAGSRAPSGSGSS Trigger: GGATGAGCCTGACCCCGAAGGAGCTCTCGAGCCTGCTGAGCATCATCTCGGAGGAGGCGGGCGGCGGCAGCACCTTCGAGGGCCTGTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGGTTGGTGGCTCAGTCTTCGGGAGCTCCCAGGGGTCGGGTTTAGTTGAGCTGGCCGCGAACGGGTaGGCGGCGAGCGGCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLVGGSVFGSSQGSGLVELAANG*AASGSV Trigger: CACCGAGCCGCTCGCCGCCAACCCGTTCGCGGCCAG...CTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS TCA 90 bp | GCAGCATCACCAGCACCGAGCCCAGGCGGAAGTGGTCGGCCTTGCTaGAGTAGTGGTGGAAGGCGGTGGACAGGCCCTCGAAGGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AASPAPSPGGSGRPC*SSGGRRWTGPRRCC Trigger: GCAGCACCTTCGAGGGCCTGTCCACCGCCTTCCACCACTACTTCAGCAAGGCCGACCACTTCCGCCTGGGCTCGGTGCTGGTGATGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGGCAGCCCCTGGCCGCGAACGGGTaGGCGGCGAGCGGCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVSKGSSASSPRGQTRQPLAANG*AASGSV Trigger: CACCGAGCCGCTCGCCGCCAACCCGTTCGCGGCCAG...GGGCTGCCTGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | AGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGCGGGCGGCGCCGGGTaGAGCAGGTGCGCGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPGSPLLCMCLDQPWYCLAGGAG*SRCAKL Trigger: CAGCTTCGCGCACCTGCTCAACCCGGCGCCGCCCGC...CAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS TCA 90 bp | CTGAGCTGTCAAATCCAGAGTTGGACGAGTCCGGGTCTGGGTCACTaGGGATGCTTGGGAAGCTGGCTTTGCTCTGGGTTGGCAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSCQIQSWTSPGLGH*GCLGSWLCSGLAAQ Trigger: CTGAGCTGCCAACCCAGAGCAAAGCCAGCTTCCCAAGCATCCTCAGTGACCCAGACCCGGACTCGTCCAACTCTGGATTTGACAGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCGAGGAGCTGTGTCTGTaGGGGAGACGACAGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLCMCLDQPWYCLVGGSVEELCL*GRRQGA Trigger: AGCCCCCTGTCGTCTCCCCAACAGACACAGCTCCTC...GACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | TCGGGTTCTGTGGGATTTAGCCAGGCCAGTTCATCCTCACAGATGTaGAGAGGGGGTGGTGGGCGGATAAACTCTGGTCGAAAGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGSVGFSQASSSSQM*RGGGGRINSGRKWL Trigger: AAGCCACTTTCGACCAGAGTTTATCCGCCCACCACCCCCTCTCCACATCTGTGAGGATGAACTGGCCTGGCTAAATCCCACAGAACCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | TCACACACATCGATCTGTCCCACTGGATGGCATGCTCGGGTTCTGTaGGATTTAGCCAGGCCAGTTCATCCTCACAGATGTGGAGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHTSICPTGWHARVL*DLARPVHPHRCGEG Trigger: CCCCTCTCCACATCTGTGAGGATGAACTGGCCTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGATGTGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCCTTGGGAAGCTGGCTTaGCTCTGGGTTGGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLCMCLDQPWYCLVGGSVLGKLA*LWVGSS Trigger: TGAGCTGCCAACCCAGAGCAAAGCCAGCTTCCCAAG...GACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTGTTTCACACCTTGCTTACTAAGAGCCACGCTCACCGTAAATTCTCAGCGGAGGAGCTGTGTCTGTaGGGGAGACGACAGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLFHTLLTKSHAHRKFSAEELCL*GRRQGA Trigger: AGCCCCCTGTCGTCTCCCCAACAGACACAGCTCCTC...CGCTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS GCA 90 bp | CCAGTGCTATTCTTCACACACATCGATCTGTCCCACTGGATGGCATaGTCGGGTTCTGTGGGATTTAGCCAGGCCAGTTCATCCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PVLFFTHIDLSHWMA*SGSVGFSQASSSSQ Trigger: CTGTGAGGATGAACTGGCCTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGATGTGTGTGAAGAATAGCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | CCACACCAGTGCTATTCTTCACACACATCGATCTGTCCCACTGGATaGCATGCTCGGGTTCTGTGGGATTTAGCCAGGCCAGTTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PHQCYSSHTSICPTG*HARVLWDLARPVHP Trigger: AGGATGAACTGGCCTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGATGTGTGTGAAGAATAGCACTGGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATGGGCTGTTGGCGGGCGGCGCCGGGTaGAGCAGGTGCGCGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKSLKLVILKQCFVHGLLAGGAG*SRCAKL Trigger: CAGCTTCGCGCACCTGCTCAACCCGGCGCCGCCCGC...CAACAGCCCATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | TGTATGTGCTTGGATCAGCCATGGTACTGCTTGGTTGGTGGCTCAGTCTTCGGGTTCGCCATGATCCGCTaGATCTCCACACCAGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CMCLDQPWYCLVGGSVFGFAMIR*ISTPVL Trigger: TAGCACTGGTGTGGAGATCAAGCGGATCATGGCGAA...CCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | ATGTCCACAGACTGTCCCATGTTTCCAACGTCCATCAAGGCAATCTaGCGAGGTGTCTTTTTGAACAGTTCCCTTGGGGGTGCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: MSTDCPMFPTSIKAI*RGVFLNSSLGGASM Trigger: CATGCTGGCACCCCCAAGGGAACTGTTCAAAAAGACACCTCGCCAGATTGCCTTGATGGACGTTGGAAACATGGGACAGTCTGTGGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | ATCTCCACACCAGTGCTATTCTTCACACACATCGATCTGTCCCACTaGATGGCATGCTCGGGTTCTGTGGGATTTAGCCAGGCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISTPVLFFTHIDLSH*MACSGSVGFSQASS Trigger: TGAACTGGCCTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGATGTGTGTGAAGAATAGCACTGGTGTGGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | CATCCTTGTTTCACACCTTGCTTACTAAGAGCCACGCTCACCGTAAATTCTCAGCTGTCAAATCCAGAGTaGGACGAGTCCGGGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HPCFTPCLLRATLTVNSQLSNPE*DESGSG Trigger: CCCAGACCCGGACTCGTCCAACTCTGGATTTGACAG...CTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | AGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGATAGCGACTAAAGGGTaGTTCTCCACTAGATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPGSPLLCMCLDQPWYCLIATKG*FSTRSG Trigger: TCCAGATCTAGTGGAGAACAACCCTTTAGTCGCTAT...CAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | CCAGACCAGGCAGCCCTCTGCTGTGTATGTGCTTGGATCAGCCATGGTACTGCTTGCACGTTAATAATTTaGTTACGGATCAAAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDQAALCCVCAWISHGTACTLII*LRIKDW Trigger: CCAGTCTTTGATCCGTAACAAAATTATTAACGTGCA...AGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGGCTGCCTGGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTATACACCTTTAATCACAGCATGCAGAGGCAGAAGGATCTCTGATTTCTTCGCCATGATCCGCTaGATCTCCACACCAGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: WWYTPLITACRGRRISDFFAMIR*ISTPVL Trigger: TAGCACTGGTGTGGAGATCAAGCGGATCATGGCGAA...GAAATCAGAGATCCTTCTGCCTCTGCATGCTGTGATTAAAGGTGTATACCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGCCTCAAGTCTCTAAAGGATCGAGTGCATCTTCTCCCAGAGGCCAGACCAGATTTACAACTTCCATaGAATGTAAGGACATGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGLKSLKDRVHLLPEARPDLQLP*NVRTCP Trigger: TGGACATGTCCTTACATTCAATGGAAGTTGTAAATC...TGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTGAGGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS GCA 90 bp | TCCATGTTGACCAGGACAGAGAAATACTCCGTGATCTGGCTTGACTaGATCAGTTTCAGCAGCATTTCTATAGCGACTAAAGGGTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMLTRTEKYSVIWLD*ISFSSISIATKGLF Trigger: GAACAACCCTTTAGTCGCTATAGAAATGCTGCTGAAACTGATGCAGTCAAGCCAGATCACGGAGTATTTCTCTGTCCTGGTCAACATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCCCACAGTAAGTCTTTGAAACTTGTCATTCTAAAACAGTGCTTTGTTCATCTGTCAAATCCAGAGTaGGACGAGTCCGGGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAHSKSLKLVILKQCFVHLSNPE*DESGSG Trigger: CCCAGACCCGGACTCGTCCAACTCTGGATTTGACAG...ATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | AAGGACATGTCCATGTTGACCAGGACAGAGAAATACTCCGTGATCTaGCTTGACTGCATCAGTTTCAGCAGCATTTCTATAGCGACTAAA | + |
|
Preference number: 5 (lower is better) Translates to: KDMSMLTRTEKYSVI*LDCISFSSISIATK Trigger: TTTAGTCGCTATAGAAATGCTGCTGAAACTGATGCAGTCAAGCCAGATCACGGAGTATTTCTCTGTCCTGGTCAACATGGACATGTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTATACACCTTTAATCACAGCATGCAGAGGCAGAAGGATCTCTGATTTCATAGCGACTAAAGGGTaGTTCTCCACTAGATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WWYTPLITACRGRRISDFIATKG*FSTRSG Trigger: TCCAGATCTAGTGGAGAACAACCCTTTAGTCGCTAT...GAAATCAGAGATCCTTCTGCCTCTGCATGCTGTGATTAAAGGTGTATACCACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | CATCCTTGTTTCACACCTTGCTTACTAAGAGCCACGCTCACCGTAAATTCTCAGTGCACGTTAATAATTTaGTTACGGATCAAAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPCFTPCLLRATLTVNSQCTLII*LRIKDW Trigger: CCAGTCTTTGATCCGTAACAAAATTATTAACGTGCA...CTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGGCGCAAGGATTATTGTTTCTTGTTCCTTCTCCACTGTTAGGAGATTGTGATTTACAACTTCCATaGAATGTAAGGACATGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGAQGLLFLVPSPLLGDCDLQLP*NVRTCP Trigger: TGGACATGTCCTTACATTCAATGGAAGTTGTAAATC...ACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAATAATCCTTGCGCCCCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS GCA 90 bp | CTACTAAATTCAATGCAGAAGGCCTGCACTTCTATAAACAAGTCCTaGACGTTAATAATTTTGTTACGGATCAAAGACTGGAGAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: LLNSMQKACTSINKS*TLIILLRIKDWRNT Trigger: TGTGTTTCTCCAGTCTTTGATCCGTAACAAAATTATTAACGTGCAGGACTTGTTTATAGAAGTGCAGGCCTTCTGCATTGAATTTAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 90 bp | ATAAACAAGTCCTGCACGTTAATAATTTTGTTACGGATCAAAGACTaGAGAAACACACACACAAGACGCACCAAACGATTCTGCATATAT | + |
|
Preference number: 5 (lower is better) Translates to: INKSCTLIILLRIKD*RNTHTRRTKRFCIY Trigger: ATATATGCAGAATCGTTTGGTGCGTCTTGTGTGTGTGTTTCTCCAGTCTTTGATCCGTAACAAAATTATTAACGTGCAGGACTTGTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
||
| CDS TCA 90 bp | TCCTTAATCTGTTCACAAGTAGAAATGCAATTGGATATGTATAGGTaGATAAATTCAGGAGGTAGGTCAACAGCTGTAGTTAGTCGATTT | + |
|
Preference number: 5 (lower is better) Translates to: SLICSQVEMQLDMYR*INSGGRSTAVVSRF Trigger: AAATCGACTAACTACAGCTGTTGACCTACCTCCTGAATTTATTCACCTATACATATCCAATTGCATTTCTACTTGTGAACAGATTAAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
||
| CDS CCA 72 bp | GGCCGCTCCGGAACGCCGCTGCCTCCCGCGCCCCTCTaGGATCCGCTGAGGAGAGAAGCCGGCCAGACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GRSGTPLPPAPL*DPLRREAGQTP Trigger: CGGCGTCTGGCCGGCTTCTCTCCTCAGCGGATCCCAGAGGGGCGCGGGAGGCAGCGGCGTTCCGGAGCGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS TCA 72 bp | GAACGCCGCTGCCTCCCGCGCCCCTCTGGGATCCGCTaGGGAGAGAAGCCGGCCAGACGCCGTGCTCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ERRCLPRPSGIR*GEKPARRRARP Trigger: GGGGCGAGCACGGCGTCTGGCCGGCTTCTCTCCTCAGCGGATCCCAGAGGGGCGCGGGAGGCAGCGGCGTTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS TCA 72 bp | CCTCGAAGGTGCTGCCGCCGCCCGCCTCCTCCGAGATaGTGCTCAGCAGGCTCGAGAGCTCCTTCGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRRCCRRPPPPR*CSAGSRAPSGS Trigger: TGACCCCGAAGGAGCTCTCGAGCCTGCTGAGCATCATCTCGGAGGAGGCGGGCGGCGGCAGCACCTTCGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS TCA 72 bp | CCAGCACCGAGCCCAGGCGGAAGTGGTCGGCCTTGCTaGAGTAGTGGTGGAAGGCGGTGGACAGGCCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PAPSPGGSGRPC*SSGGRRWTGPR Trigger: TCGAGGGCCTGTCCACCGCCTTCCACCACTACTTCAGCAAGGCCGACCACTTCCGCCTGGGCTCGGTGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS TCA 72 bp | CAAATCCAGAGTTGGACGAGTCCGGGTCTGGGTCACTaGGGATGCTTGGGAAGCTGGCTTTGCTCTGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QIQSWTSPGLGH*GCLGSWLCSGL Trigger: CAACCCAGAGCAAAGCCAGCTTCCCAAGCATCCTCAGTGACCCAGACCCGGACTCGTCCAACTCTGGATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 72 bp | CCAGGCCAGTTCATCCTCACAGATGTGGAGAGGGGGTaGTGGGCGGATAAACTCTGGTCGAAAGTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PGQFILTDVERG*WADKLWSKVAF Trigger: GAAAGCCACTTTCGACCAGAGTTTATCCGCCCACCACCCCCTCTCCACATCTGTGAGGATGAACTGGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 72 bp | GTGGGATTTAGCCAGGCCAGTTCATCCTCACAGATGTaGAGAGGGGGTGGTGGGCGGATAAACTCTGGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: VGFSQASSSSQM*RGGGGRINSGR Trigger: TCGACCAGAGTTTATCCGCCCACCACCCCCTCTCCACATCTGTGAGGATGAACTGGCCTGGCTAAATCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CAA 90 bp | AACTCACCGAGGAGCTGTGTCTGTTGGGGAGACGACAGGGGGCTTTaGAAGGCTTTCGCCATGATCCGCTTGATCTCCACACCAGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: NSPRSCVCWGDDRGL*KAFAMIRLISTPVL Trigger: TAGCACTGGTGTGGAGATCAAGCGGATCATGGCGAAAGCCTTCAAAAGCCCCCTGTCGTCTCCCCAACAGACACAGCTCCTCGGTGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 72 bp | ACAGATGTGGAGAGGGGGTGGTGGGCGGATAAACTCTaGTCGAAAGTGGCTTTCAATAGGTGGCTTTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TDVERGWWADKL*SKVAFNRWLWA Trigger: GGCCCAAAGCCACCTATTGAAAGCCACTTTCGACCAGAGTTTATCCGCCCACCACCCCCTCTCCACATCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CAA 72 bp | AGGAGCTGTGTCTGTTGGGGAGACGACAGGGGGCTTTaGAAGGCTTTCGCCATGATCCGCTTGATCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RSCVCWGDDRGL*KAFAMIRLIST Trigger: TGTGGAGATCAAGCGGATCATGGCGAAAGCCTTCAAAAGCCCCCTGTCGTCTCCCCAACAGACACAGCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CAA 90 bp | AAAGACTCTGTGATCCGAGAGGCAACTGAGCTGTCAAATCCAGAGTaGGACGAGTCCGGGTCTGGGTCACTGAGGATGCTTGGGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KDSVIREATELSNPE*DESGSGSLRMLGKL Trigger: CAGCTTCCCAAGCATCCTCAGTGACCCAGACCCGGACTCGTCCAACTCTGGATTTGACAGCTCAGTTGCCTCTCGGATCACAGAGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 72 bp | GGCCAGTTCATCCTCACAGATGTGGAGAGGGGGTGGTaGGCGGATAAACTCTGGTCGAAAGTGGCTTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GQFILTDVERGW*ADKLWSKVAFN Trigger: ATTGAAAGCCACTTTCGACCAGAGTTTATCCGCCCACCACCCCCTCTCCACATCTGTGAGGATGAACTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CCA 72 bp | TCGATCTGTCCCACTGGATGGCATGCTCGGGTTCTGTaGGATTTAGCCAGGCCAGTTCATCCTCACAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: SICPTGWHARVL*DLARPVHPHRC Trigger: ACATCTGTGAGGATGAACTGGCCTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS CAA 90 bp | CCCATGTTTCCAACGTCCATCAAGGCAATCTGGCGAGGTGTCTTTTaGAACAGTTCCCTTGGGGGTGCCAGCATGAGCTGGGAGAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PMFPTSIKAIWRGVF*NSSLGGASMSWERK Trigger: TTTCCTCTCCCAGCTCATGCTGGCACCCCCAAGGGAACTGTTCAAAAAGACACCTCGCCAGATTGCCTTGATGGACGTTGGAAACATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
||
| CDS GCA 72 bp | TTCTTCACACACATCGATCTGTCCCACTGGATGGCATaGTCGGGTTCTGTGGGATTTAGCCAGGCCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: FFTHIDLSHWMA*SGSVGFSQASS Trigger: TGAACTGGCCTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGATGTGTGTGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| CDS CCA 72 bp | TGCTATTCTTCACACACATCGATCTGTCCCACTGGATaGCATGCTCGGGTTCTGTGGGATTTAGCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: CYSSHTSICPTG*HARVLWDLARP Trigger: TGGCCTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGATGTGTGTGAAGAATAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| CDS CCA 72 bp | CCAGTGCTATTCTTCACACACATCGATCTGTCCCACTaGATGGCATGCTCGGGTTCTGTGGGATTTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PVLFFTHIDLSH*MACSGSVGFSQ Trigger: CTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGATGTGTGTGAAGAATAGCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| CDS CCA 72 bp | GACTGTCCCATGTTTCCAACGTCCATCAAGGCAATCTaGCGAGGTGTCTTTTTGAACAGTTCCCTTGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: DCPMFPTSIKAI*RGVFLNSSLGG Trigger: ACCCCCAAGGGAACTGTTCAAAAAGACACCTCGCCAGATTGCCTTGATGGACGTTGGAAACATGGGACAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| CDS CAA 72 bp | GACAGGGGGCTTTTGAAGGCTTTCGCCATGATCCGCTaGATCTCCACACCAGTGCTATTCTTCACACACATC | + |
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Preference number: 6 (lower is better) Translates to: DRGLLKAFAMIR*ISTPVLFFTHI Trigger: GATGTGTGTGAAGAATAGCACTGGTGTGGAGATCAAGCGGATCATGGCGAAAGCCTTCAAAAGCCCCCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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| CDS TCA 72 bp | GTTGACCAGGACAGAGAAATACTCCGTGATCTGGCTTaGCTGCATCAGTTTCAGCAGCATTTCTATAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: VDQDREILRDLA*LHQFQQHFYSD Trigger: GTCGCTATAGAAATGCTGCTGAAACTGATGCAGTCAAGCCAGATCACGGAGTATTTCTCTGTCCTGGTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
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| CDS GCA 72 bp | ACCAGGACAGAGAAATACTCCGTGATCTGGCTTGACTaGATCAGTTTCAGCAGCATTTCTATAGCGACTAAA | + |
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Preference number: 6 (lower is better) Translates to: TRTEKYSVIWLD*ISFSSISIATK Trigger: TTTAGTCGCTATAGAAATGCTGCTGAAACTGATGCAGTCAAGCCAGATCACGGAGTATTTCTCTGTCCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
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| CDS CCA 72 bp | TCCATGTTGACCAGGACAGAGAAATACTCCGTGATCTaGCTTGACTGCATCAGTTTCAGCAGCATTTCTATA | + |
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Preference number: 6 (lower is better) Translates to: SMLTRTEKYSVI*LDCISFSSISI Trigger: TATAGAAATGCTGCTGAAACTGATGCAGTCAAGCCAGATCACGGAGTATTTCTCTGTCCTGGTCAACATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
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| CDS CAA 90 bp | GTTAGTCGATTTACAACTTCCATTGAATGTAAGGACATGTCCATGTaGACCAGGACAGAGAAATACTCCGTGATCTGGCTTGACTGCATC | + |
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Preference number: 6 (lower is better) Translates to: VSRFTTSIECKDMSM*TRTEKYSVIWLDCI Trigger: GATGCAGTCAAGCCAGATCACGGAGTATTTCTCTGTCCTGGTCAACATGGACATGTCCTTACATTCAATGGAAGTTGTAAATCGACTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
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| CDS CAA 72 bp | ATCAGTTTCAGCAGCATTTCTATAGCGACTAAAGGGTaGTTCTCCACTAGATCTGGAAGTTTCGCTGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: ISFSSISIATKG*FSTRSGSFAGV Trigger: TACTCCAGCGAAACTTCCAGATCTAGTGGAGAACAACCCTTTAGTCGCTATAGAAATGCTGCTGAAACTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
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| CDS CAA 72 bp | TTTACAACTTCCATTGAATGTAAGGACATGTCCATGTaGACCAGGACAGAGAAATACTCCGTGATCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: FTTSIECKDMSM*TRTEKYSVIWL Trigger: AAGCCAGATCACGGAGTATTTCTCTGTCCTGGTCAACATGGACATGTCCTTACATTCAATGGAAGTTGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 ENSMUST00000195567.2 |
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| CDS GCA 72 bp | TCAATGCAGAAGGCCTGCACTTCTATAAACAAGTCCTaGACGTTAATAATTTTGTTACGGATCAAAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: SMQKACTSINKS*TLIILLRIKDW Trigger: CCAGTCTTTGATCCGTAACAAAATTATTAACGTGCAGGACTTGTTTATAGAAGTGCAGGCCTTCTGCATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003219.14 ENSMUST00000161515.8 |
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