RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNOT10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056167

Ensembl transcript IDs: ENSMUST00000070117.8, ENSMUST00000213955.2, ENSMUST00000215155.2, ENSMUST00000216785.2, ENSMUST00000217148.2, ENSMUST00000238809.2

Found 364 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGAGGGGCGCGCTTGCCAGCTGAGGAGAGAGCGTAGATACGGATaGAGGGGCTGTGCAGAGGACAGAGAGCACCGCTCCACGCTGAGC +
Preference number: 1 (lower is better)
Translates to: TEGRACQLRRERRYG*RGCAEDREHRSTLS
Trigger: GCTCAGCGTGGAGCGGTGCTCTCTGTCCTCTGCACAGCCCCTTCATCCGTATCTACGCTCTCTCCTCAGCTGGCAAGCGCGCCCCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 90 bp GGGCCTTGTCGTACTCGCTCCTCAGGCAGTAGGCACTGCCCAGGTTaGAGAGCATCACAGTCCGGGCAGAGTTCACAGAACTGGGGTAGC +
Preference number: 1 (lower is better)
Translates to: GPCRTRSSGSRHCPG*RASQSGQSSQNWGS
Trigger: GCTACCCCAGTTCTGTGAACTCTGCCCGGACTGTGATGCTCTTCAACCTGGGCAGTGCCTACTGCCTGAGGAGCGAGTACGACAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 90 bp GGGCTGGAACACTGTCTTCTTCCTCACATCAGAGTGCGCCTTTACTaGGGGGAGCAGCTGGTTCCGCTTGATCATCTGCAAGGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: GLEHCLLPHIRVRLY*GEQLVPLDHLQGQL
Trigger: CAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTCCCCGCAGTAAAGGCGCACTCTGATGTGAGGAAGAAGACAGTGTTCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 90 bp CTGCACGTCTCGCTGCTCTCGCTGCTTTCCGTGTTCCCTCCAAGCTaGCTGCTGCTCTTGGAGCCATTTTCCTGCTTGGGATCTTGCTGT +
Preference number: 1 (lower is better)
Translates to: LHVSLLSLLSVFPPS*LLLLEPFSCLGSCC
Trigger: ACAGCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACACGGAAAGCAGCGAGAGCAGCGAGACGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 90 bp CTCTCACACTGCCGCTCGCTCGCCCACACTGTGAGCGTGCGTACCTaGTGTATCTTGGACTTGGCAGCCTCTATTAGAGCTGCACTCTCA +
Preference number: 1 (lower is better)
Translates to: LSHCRSLAHTVSVRT*CILDLAASIRAALS
Trigger: TGAGAGTGCAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGGTACGCACGCTCACAGTGTGGGCGAGCGAGCGGCAGTGTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
3UTR GCA 90 bp TATCTCCATCATGGCTCTTACTGCTGCACGTCTCGCTGCTCTCGCTaGTTTCCGTGTTCCCTCCAAGCTGGCTGCTGCTCTTGGAGCCAT +
Preference number: 1 (lower is better)
Translates to: YLHHGSYCCTSRCSR*FPCSLQAGCCSWSH
Trigger: ATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACACGGAAAGCAGCGAGAGCAGCGAGACGTGCAGCAGTAAGAGCCATGATGGAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 90 bp CTCAGCGGAGAAGACGGTGGAGCGGGAATGAACTTATCTCCATCATaGCTCTTACTGCTGCACGTCTCGCTGCTCTCGCTGCTTTCCGTG +
Preference number: 1 (lower is better)
Translates to: LSGEDGGAGMNLSPS*LLLLHVSLLSLLSV
Trigger: CACGGAAAGCAGCGAGAGCAGCGAGACGTGCAGCAGTAAGAGCCATGATGGAGATAAGTTCATTCCCGCTCCACCGTCTTCTCCGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 90 bp TCTCACTTCCTCTGCACGGTGGTGAACGCTGGCATTTGGATGGGCTaGATGGGGTGCACGGGCTGGAACACTGTCTTCTTCCTCACATCA +
Preference number: 1 (lower is better)
Translates to: SHFLCTVVNAGIWMG*MGCTGWNTVFFLTS
Trigger: TGATGTGAGGAAGAAGACAGTGTTCCAGCCCGTGCACCCCATCCAGCCCATCCAAATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 90 bp TCTCGCTGCTCTCGCTGCTTTCCGTGTTCCCTCCAAGCTGGCTGCTaGTCTTGGAGCCATTTTCCTGCTTGGGATCTTGCTGTTCTTCAG +
Preference number: 1 (lower is better)
Translates to: SRCSRCFPCSLQAGC*SWSHFPAWDLAVLQ
Trigger: CTGAAGAACAGCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACACGGAAAGCAGCGAGAGCAGCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 90 bp TTTCTAACTCCTGTTTCCTCAGCGGAGAAGACGGTGGAGCGGGAATaGACTTATCTCCATCATGGCTCTTACTGCTGCACGTCTCGCTGC +
Preference number: 1 (lower is better)
Translates to: FLTPVSSAEKTVERE*TYLHHGSYCCTSRC
Trigger: GCAGCGAGACGTGCAGCAGTAAGAGCCATGATGGAGATAAGTTCATTCCCGCTCCACCGTCTTCTCCGCTGAGGAAACAGGAGTTAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 90 bp CTAAGGCCAGAGCCACATAAGCACTGCAAGCAAGGATGGAGCACTTaGGGTTTTCTAACTCCTGTTTCCTCAGCGGAGAAGACGGTGGAG +
Preference number: 1 (lower is better)
Translates to: LRPEPHKHCKQGWST*GFLTPVSSAEKTVE
Trigger: CTCCACCGTCTTCTCCGCTGAGGAAACAGGAGTTAGAAAACCTCAAGTGCTCCATCCTTGCTTGCAGTGCTTATGTGGCTCTGGCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 90 bp TCACTTCCTTCCCTTCACAGCTACACCCTCCGGTCCTACAAGTCCTaGATTACACAGCTCGGGAGTGGCAACAGAGACCAGTTCTCATCA +
Preference number: 1 (lower is better)
Translates to: SLPSLHSYTLRSYKS*ITQLGSGNRDQFSS
Trigger: TGATGAGAACTGGTCTCTGTTGCCACTCCCGAGCTGTGTAATTCAGGACTTGTAGGACCGGAGGGTGTAGCTGTGAAGGGAAGGAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 90 bp TCCGTGTTCCCTCCAAGCTGGCTGCTGCTCTTGGAGCCATTTTCCTaGTTGGGATCTTGCTGTTCTTCAGGTAACAGCAACAAGGCATTT +
Preference number: 1 (lower is better)
Translates to: SVFPPSWLLLLEPFS*LGSCCSSGNSNKAF
Trigger: AAATGCCTTGTTGCTGTTACCTGAAGAACAGCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 90 bp GCTTGGGATCTTGCTGTTCTTCAGGTAACAGCAACAAGGCATTTCTaGGACAGATGGCTGCAAACTCCACACTGGCTACAGGAATGGCTG +
Preference number: 1 (lower is better)
Translates to: AWDLAVLQVTATRHF*DRWLQTPHWLQEWL
Trigger: CAGCCATTCCTGTAGCCAGTGTGGAGTTTGCAGCCATCTGTCTCAGAAATGCCTTGTTGCTGTTACCTGAAGAACAGCAAGATCCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 90 bp CCAAGCTGGCTGCTGCTCTTGGAGCCATTTTCCTGCTTGGGATCTTaGTGTTCTTCAGGTAACAGCAACAAGGCATTTCTGAGACAGATG +
Preference number: 1 (lower is better)
Translates to: PSWLLLLEPFSCLGS*CSSGNSNKAFLRQM
Trigger: CATCTGTCTCAGAAATGCCTTGTTGCTGTTACCTGAAGAACAGCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 90 bp CTACACCCTCCGGTCCTACAAGTCCTGAATTACACAGCTCGGGAGTaGCAACAGAGACCAGTTCTCATCAATGTGTCCTCATTAACCTTG +
Preference number: 1 (lower is better)
Translates to: LHPPVLQVLNYTARE*QQRPVLINVSSLTL
Trigger: CAAGGTTAATGAGGACACATTGATGAGAACTGGTCTCTGTTGCCACTCCCGAGCTGTGTAATTCAGGACTTGTAGGACCGGAGGGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 90 bp GGGGGCGTCAGATCTCATTACGAATGGTTTCAGACACCATGTGATTaGTGGGATTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTC +
Preference number: 1 (lower is better)
Translates to: GGVRSHYEWFQTPCD*WDLNSGLSEEQSVL
Trigger: GAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAATCACATGGTGTCTGAAACCATTCGTAATGAGATCTGACGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
3UTR TCA 90 bp TTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCTTGACCGCTaGGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATGTACC +
Preference number: 1 (lower is better)
Translates to: FELWTFRRAVSALDR*VISPVPSIFCFPCT
Trigger: GGTACATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
3UTR CCA 90 bp AGTCTCTTACCAAGTAGGAACTTAACAAGAGCAAGTGTTTGCTTTTaGAGTTGTGGAGGCTCTGCTAAAGGTATCAGGATGCAACCTCAC +
Preference number: 1 (lower is better)
Translates to: SLLPSRNLTRASVCF*SCGGSAKGIRMQPH
Trigger: GTGAGGTTGCATCCTGATACCTTTAGCAGAGCCTCCACAACTCCAAAAGCAAACACTTGCTCTTGTTAAGTTCCTACTTGGTAAGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 90 bp CACCTAAGTCTCTTACCAAGTAGGAACTTAACAAGAGCAAGTGTTTaGTTTTGGAGTTGTGGAGGCTCTGCTAAAGGTATCAGGATGCAA +
Preference number: 1 (lower is better)
Translates to: HLSLLPSRNLTRASV*FWSCGGSAKGIRMQ
Trigger: TTGCATCCTGATACCTTTAGCAGAGCCTCCACAACTCCAAAAGCAAACACTTGCTCTTGTTAAGTTCCTACTTGGTAAGAGACTTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp AGAGAGCACCGCTCCACGCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGAGGGACTGGGAGGCGTaGCCTTGCTGGCAGAAGTGC +
Preference number: 2 (lower is better)
Translates to: REHRSTLSTWDKALLLRLRDWEA*PCWQKC
Trigger: GCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCT...CAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR CAA 90 bp CGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCTGGCATTaGGATGGGCTGGATGGGGTGCACGGGCTGGAACACTGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: RGKLSLPLHGGERWH*DGLDGVHGLEHCLL
Trigger: AAGAAGACAGTGTTCCAGCCCGTGCACCCCATCCAGCCCATCCAAATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 90 bp TGCCGCTCGCTCGCCCACACTGTGAGCGTGCGTACCTGGTGTATCTaGGACTTGGCAGCCTCTATTAGAGCTGCACTCTCAGCCTTAGGG +
Preference number: 2 (lower is better)
Translates to: CRSLAHTVSVRTWCI*DLAASIRAALSALG
Trigger: CCCTAAGGCTGAGAGTGCAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGGTACGCACGCTCACAGTGTGGGCGAGCGAGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
3UTR-3UTR GCA 90 bp GGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTACTTCCGTCTTCCTaGCACAATGTTCCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GGVALLAEVHHRDRPSVSLLPSS*HNVPLA
Trigger: GGCCAGGGGAACATTGTGGCAGGAAGACGGAAGTAG...AGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp GACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGACTACTTCCGTCTTCCTaGCACAATGTTCCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: DTSGTGRRGLAGRSASQGLLPSS*HNVPLA
Trigger: GGCCAGGGGAACATTGTGGCAGGAAGACGGAAGTAG...TCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp GGGCACCTCCTTAGGATGGATCATCGATGCCGCCTGATGCAGACACTTTCGGGCGAGAGCCAGACAGCTTaGGCTGCTGCAGGAGCTGAT +
Preference number: 2 (lower is better)
Translates to: GHLLRMDHRCRLMQTLSGESQTA*AAAGAD
Trigger: ATCAGCTCCTGCAGCAGCCCAAGCTGTCTGGCTCTC...GCCCGAAAGTGTCTGCATCAGGCGGCATCGATGATCCATCCTAAGGAGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 90 bp CTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTaGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: LHLQGVTLQGLGGVA*LAEVHHRDRPSVSL
Trigger: GAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
3UTR-3UTR TCA 90 bp AGAGAGCACCGCTCCACGCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGATGAGCCCAGGAGTTTaGAGCCTGCCTGGGCAAACA +
Preference number: 2 (lower is better)
Translates to: REHRSTLSTWDKALLLRLMSPGV*SLPGQT
Trigger: TGTTTGCCCAGGCAGGCTTCAAACTCCTGGGCTCAT...CAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp GTTCCCCTGGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCCACTGGCTACAGGAATaGCTGAAGACTGACCATCAT +
Preference number: 2 (lower is better)
Translates to: VPLASRGKLSLPLHGGERHWLQE*LKTDHH
Trigger: ATGATGGTCAGTCTTCAGCCATTCCTGTAGCCAGTG...GCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp CTGGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCTGGCATCTGCAAACTCCACACTaGCTACAGGAATGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: LASRGKLSLPLHGGERWHLQTPH*LQEWLK
Trigger: CTTCAGCCATTCCTGTAGCCAGTGTGGAGTTTGCAG...ATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR TCA 90 bp CTGGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCTGGCATGGCTACAGGAATGGCTaGAGACTGACCATCATTGTA +
Preference number: 2 (lower is better)
Translates to: LASRGKLSLPLHGGERWHGYRNG*RLTIIV
Trigger: TACAATGATGGTCAGTCTTCAGCCATTCCTGTAGCC...ATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp AGTAAGACCAGCTGTAAGCGCGGAGAGCCAGCTTCACTTCCTTCCCTTCACAGCCCTTGCTGGCAGAAGTaGATCACAGGGACAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SKTSCKRGEPASLPSLHSPCWQK*ITGTGP
Trigger: TGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGG...GCTGTGAAGGGAAGGAAGTGAAGCTGGCTCTCCGCGCTTACAGCTGGTCTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp GGGCTGGATGGGGTGCACGGGCTGGAACACTGTCTTCTTCCTCACATCAGAGTGTCCCTCCAAGCTGGCTaGTGCTCTTGGAGCCATTTT +
Preference number: 2 (lower is better)
Translates to: GLDGVHGLEHCLLPHIRVSLQAG*CSWSHF
Trigger: AAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGA...CACTCTGATGTGAGGAAGAAGACAGTGTTCCAGCCCGTGCACCCCATCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp CTGGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCTGGCATTCTAAGTCTTTGGGATaGAGGCCAGGCTACTTAAGG +
Preference number: 2 (lower is better)
Translates to: LASRGKLSLPLHGGERWHSKSLG*RPGYLR
Trigger: CCTTAAGTAGCCTGGCCTGCATCCCAAAGACTTAGA...ATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp TTTACTGCGGGGAGCAGCTGGTTCCGCTTGATCATCTGCAAGGCCAGCTGTGTAGTGTTCCCTCCAAGCTaGCTGCTGCTCTTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: FTAGSSWFRLIICKASCVVFPPS*LLLLEP
Trigger: TGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACAC...TACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTCCCCGCAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 90 bp TCGCTCGCCCACACTGTGAGCGTGCGTACCTGGTGTATCTTGGACTaGGCAGCCTCTATTAGAGCTGCACTCTCAGCCTTAGGGTTGGAT +
Preference number: 2 (lower is better)
Translates to: SLAHTVSVRTWCILD*AASIRAALSALGLD
Trigger: ATCCAACCCTAAGGCTGAGAGTGCAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGGTACGCACGCTCACAGTGTGGGCGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
3UTR-3UTR TCA 90 bp TCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCAACGGTGGAGCGGGAATaGACTTATCTCCATCATGGC +
Preference number: 2 (lower is better)
Translates to: SSMPPDADTFGPCRTRSSTVERE*TYLHHG
Trigger: GCCATGATGGAGATAAGTTCATTCCCGCTCCACCGT...TGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp GCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGACAGATACACGCAGGACGCTGGCTGCTGCTCTTaGAGCCATTTTCCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: AEHLGQSTTPQADRYTQDAGCCS*SHFPAW
Trigger: CCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGC...GTCCTGCGTGTATCTGTCAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp AGCACTTGGGACAAAGCACTACTCCTCAGGCTGACAGATACACGCAGGACACAGGTGTTCCCTCCAAGCTaGCTGCTGCTCTTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: STWDKALLLRLTDTRRTQVFPPS*LLLLEP
Trigger: TGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACAC...CTGTGTCCTGCGTGTATCTGTCAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp AGAGAGCACCGCTCCACGCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGGCAAGTGTTTGCTTTTaGAGTTGTGGAGGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: REHRSTLSTWDKALLLRLASVCF*SCGGSA
Trigger: AGCAGAGCCTCCACAACTCCAAAAGCAAACACTTGC...CAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR TCA 90 bp ATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCAGGCAGTCTAAGGAGACATCAGTaGCATTCTCTGGGTTCAAGT +
Preference number: 2 (lower is better)
Translates to: MPPDADTFGPCRTRSSGSLRRHQ*HSLGSS
Trigger: ACTTGAACCCAGAGAATGTCACTGATGTCTCCTTAG...ACTGCCTGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR TCA 90 bp GGGCTGGATGGGGTGCACGGGCTGGAACACTGTCTTCTTCCTCACATCAGAGTGGGAATCACCCATGTCTaGTTCACATGGGTGATTTTC +
Preference number: 2 (lower is better)
Translates to: GLDGVHGLEHCLLPHIRVGITHV*FTWVIF
Trigger: GAAAATCACCCATGTGAATCAGACATGGGTGATTCC...CACTCTGATGTGAGGAAGAAGACAGTGTTCCAGCCCGTGCACCCCATCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp GGGCTGGATGGGGTGCACGGGCTGGAACACTGTCTTCTTCCTCACATCAGAGTGTTGGAGCCATTTTCCTaGTTGGGATCTTGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: GLDGVHGLEHCLLPHIRVLEPFS*LGSCCS
Trigger: AGAACAGCAAGATCCCAAGCAGGAAAATGGCTCCAA...CACTCTGATGTGAGGAAGAAGACAGTGTTCCAGCCCGTGCACCCCATCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp GCATCAGATATCCTGTCGAGGGAGATGAGGGCTTCTGCGGCATATAAATGGCCCTCCCTCCAAGCTGGCTaGTGCTCTTGGAGCCATTTT +
Preference number: 2 (lower is better)
Translates to: ASDILSREMRASAAYKWPSLQAG*CSWSHF
Trigger: AAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGA...GGGCCATTTATATGCCGCAGAAGCCCTCATCTCCCTCGACAGGATATCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp TCTGCAATCCTAGCACTCAAAAGGTCCAGCCAGGTCAGAGGATGGCATGAGCCCGAGCCACATAAGCACTaGAAGCAAGGATGGAGCACT +
Preference number: 2 (lower is better)
Translates to: SAILALKRSSQVRGWHEPEPHKH*KQGWST
Trigger: AGTGCTCCATCCTTGCTTGCAGTGCTTATGTGGCTC...GGGCTCATGCCATCCTCTGACCTGGCTGGACCTTTTGAGTGCTAGGATTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp ACGCAGGACACAGAGATGCAGGGTCTAAGTCTTTGGGATGCAGGCCAGGCTACTCTAAAGGTATCAGGATaGAACCTCACTGCCACCCCA +
Preference number: 2 (lower is better)
Translates to: TQDTEMQGLSLWDAGQATLKVSG*NLTATP
Trigger: TGGGGTGGCAGTGAGGTTGCATCCTGATACCTTTAG...AGTAGCCTGGCCTGCATCCCAAAGACTTAGACCCTGCATCTCTGTGTCCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp GTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTTCCGCTTGATCATCTaGAAGGCCAGCTGTGTATTA +
Preference number: 2 (lower is better)
Translates to: VALLAEVHHRDRPSVSLQFRLII*KASCVL
Trigger: TAATACACAGCTGGCCTTGCAGATGATCAAGCGGAA...CTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp AGAGAGCACCGCTCCACGCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGCTTAAGCTCGTGAGCTaGCACAAATATCTGCAATCC +
Preference number: 2 (lower is better)
Translates to: REHRSTLSTWDKALLLRLLKLVS*HKYLQS
Trigger: GGATTGCAGATATTTGTGCCAGCTCACGAGCTTAAG...CAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR TCA 90 bp GTGTGTAATGGCATCAGATATCCTGTCGAGGGAGATGAGGGCTTCTGCGGCATAACGGTGGAGCGGGAATaGACTTATCTCCATCATGGC +
Preference number: 2 (lower is better)
Translates to: VCNGIRYPVEGDEGFCGITVERE*TYLHHG
Trigger: GCCATGATGGAGATAAGTTCATTCCCGCTCCACCGT...TATGCCGCAGAAGCCCTCATCTCCCTCGACAGGATATCTGATGCCATTACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp GGGCACCTCCTTAGGATGGATCATCGATGCCGCCTGATGCAGACACTTTCGGGCGCTGGCACAAATATCTaGAATCCTAGCACTCAAAAG +
Preference number: 2 (lower is better)
Translates to: GHLLRMDHRCRLMQTLSGAGTNI*NPSTQK
Trigger: CTTTTGAGTGCTAGGATTGCAGATATTTGTGCCAGC...GCCCGAAAGTGTCTGCATCAGGCGGCATCGATGATCCATCCTAAGGAGGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 90 bp GTGTTCCCTCCAAGCTGGCTGCTGCTCTTGGAGCCATTTTCCTGCTaGGGATCTTGCTGTTCTTCAGGTAACAGCAACAAGGCATTTCTG +
Preference number: 2 (lower is better)
Translates to: VFPPSWLLLLEPFSC*GSCCSSGNSNKAFL
Trigger: CAGAAATGCCTTGTTGCTGTTACCTGAAGAACAGCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 90 bp GCTGCACTCTCAGCCTTAGGGTTGGATCCATCTTTGCTGCTGTTATaGCCAGTCTCGTTCTTCCCATTTTTGCCACCGCTACCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: AALSALGLDPSLLLL*PVSFFPFLPPLPCE
Trigger: TTCACAGGGTAGCGGTGGCAAAAATGGGAAGAACGAGACTGGCAATAACAGCAGCAAAGATGGATCCAACCCTAAGGCTGAGAGTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
3UTR-3UTR TCA 90 bp ACGCAGGACACAGAGATGCAGGGTCTAAGTCTTTGGGATGCAGGCCAGGCTACTGGAATCACCCATGTCTaGTTCACATGGGTGATTTTC +
Preference number: 2 (lower is better)
Translates to: TQDTEMQGLSLWDAGQATGITHV*FTWVIF
Trigger: GAAAATCACCCATGTGAATCAGACATGGGTGATTCC...AGTAGCCTGGCCTGCATCCCAAAGACTTAGACCCTGCATCTCTGTGTCCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR GCA 90 bp GAGCAGCTGGTTCCGCTTGATCATCTGCAAGGCCAGCTGTGTATTACCATTCTGCTAAAGGTATCAGGATaGAACCTCACTGCCACCCCA +
Preference number: 2 (lower is better)
Translates to: EQLVPLDHLQGQLCITILLKVSG*NLTATP
Trigger: TGGGGTGGCAGTGAGGTTGCATCCTGATACCTTTAG...CAGAATGGTAATACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp TCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCACGACGTGAACAAGAATaGCTCTCATCGACTCATATT +
Preference number: 2 (lower is better)
Translates to: SSMPPDADTFGPCRTRSSRREQE*LSSTHI
Trigger: AATATGAGTCGATGAGAGCCATTCTTGTTCACGTCG...TGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp ACGCAGGACACAGAGATGCAGGGTCTAAGTCTTTGGGATGCAGGCCAGGCTACTAGTTTGAAGCCTGCCTaGGCAAACAGTGAGATTACA +
Preference number: 2 (lower is better)
Translates to: TQDTEMQGLSLWDAGQATSLKPA*ANSEIT
Trigger: TGTAATCTCACTGTTTGCCCAGGCAGGCTTCAAACT...AGTAGCCTGGCCTGCATCCCAAAGACTTAGACCCTGCATCTCTGTGTCCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 90 bp GCCTCTATTAGAGCTGCACTCTCAGCCTTAGGGTTGGATCCATCTTaGCTGCTGTTATTGCCAGTCTCGTTCTTCCCATTTTTGCCACCG +
Preference number: 2 (lower is better)
Translates to: ASIRAALSALGLDPS*LLLLPVSFFPFLPP
Trigger: CGGTGGCAAAAATGGGAAGAACGAGACTGGCAATAACAGCAGCAAAGATGGATCCAACCCTAAGGCTGAGAGTGCAGCTCTAATAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
3UTR CAA 90 bp TTGGACTTGGCAGCCTCTATTAGAGCTGCACTCTCAGCCTTAGGGTaGGATCCATCTTTGCTGCTGTTATTGCCAGTCTCGTTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LDLAASIRAALSALG*DPSLLLLLPVSFFP
Trigger: TGGGAAGAACGAGACTGGCAATAACAGCAGCAAAGATGGATCCAACCCTAAGGCTGAGAGTGCAGCTCTAATAGAGGCTGCCAAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
3UTR-3UTR GCA 90 bp AAGTGTGTAATGGCATCAGATATCCTGTCGAGGGAGATGAGGGCTTCTGCGGCATCCTGCTTGGGATCTTaGTGTTCTTCAGGTAACAGC +
Preference number: 2 (lower is better)
Translates to: KCVMASDILSREMRASAASCLGS*CSSGNS
Trigger: GCTGTTACCTGAAGAACAGCAAGATCCCAAGCAGGA...TGCCGCAGAAGCCCTCATCTCCCTCGACAGGATATCTGATGCCATTACACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 90 bp TGCTGGGATTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCTaGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: CWDLNSGLSEEQSVL*TAESSLQSQVSSAF
Trigger: GAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
3UTR-3UTR TCA 90 bp AATGCTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTAAGAGAGAGCTAGAATaGTGGCCAAAACCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: NASSSGSDTSGTGRRGLAKRELE*WPKPFQ
Trigger: TTGAAAAGGTTTTGGCCATCATTCTAGCTCTCTCTT...AGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
3UTR-3UTR CCA 90 bp CCTTGTCTGATCCTACAAATACATGAAAATAGATCTGAGGCAGGACAACAGCACGAGAGCCAGACAGCTTaGGCTGCTGCAGGAGCTGAT +
Preference number: 2 (lower is better)
Translates to: PCLILQIHENRSEAGQQHESQTA*AAAGAD
Trigger: ATCAGCTCCTGCAGCAGCCCAAGCTGTCTGGCTCTC...GTGCTGTTGTCCTGCCTCAGATCTATTTTCATGTATTTGTAGGATCAGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp CAAATATCTGCAATCCTAGCACTCAAAAGGTCCAGCCAGGTCAGAGGATGGCATAGTTTGAAGCCTGCCTaGGCAAACAGTGAGATTACA +
Preference number: 2 (lower is better)
Translates to: QISAILALKRSSQVRGWHSLKPA*ANSEIT
Trigger: TGTAATCTCACTGTTTGCCCAGGCAGGCTTCAAACT...ATGCCATCCTCTGACCTGGCTGGACCTTTTGAGTGCTAGGATTGCAGATATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 90 bp AGATCTCATTACGAATGGTTTCAGACACCATGTGATTGCTGGGATTaGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCTTGACCGCT +
Preference number: 2 (lower is better)
Translates to: RSHYEWFQTPCDCWD*NSGLSEEQSVLLTA
Trigger: AGCGGTCAAGAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAATCACATGGTGTCTGAAACCATTCGTAATGAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
3UTR-3UTR CCA 90 bp GCCTTAGGGTTGGATCCATCTTTGCTGCTGTTATTGCCAGTCTCGTTCTTCCCAAGAGCTTTCTCAGCCTaGTGGGTTAATATATACAAG +
Preference number: 2 (lower is better)
Translates to: ALGLDPSLLLLLPVSFFPRAFSA*WVNIYK
Trigger: CTTGTATATATTAACCCACCAGGCTGAGAAAGCTCT...TGGGAAGAACGAGACTGGCAATAACAGCAGCAAAGATGGATCCAACCCTAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
3UTR-3UTR GCA 90 bp GAGTACACTATAGCTGTCTTCAGAAACACCAGAAGGGGGCGTCAGATCTCATTAGTCCCAAGTATCTTCTaGTTTCCATGTACCAAGTGT +
Preference number: 2 (lower is better)
Translates to: EYTIAVFRNTRRGRQISLVPSIF*FPCTKC
Trigger: ACACTTGGTACATGGAAAGCAGAAGATACTTGGGAC...TAATGAGATCTGACGCCCCCTTCTGGTGTTTCTGAAGACAGCTATAGTGTACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
3UTR-3UTR CCA 90 bp CCTTGTCTGATCCTACAAATACATGAAAATAGATCTGAGGCAGGACAACAGCACCAAGAGGGGACCACATaGAATCACCCATGTCTGATT +
Preference number: 2 (lower is better)
Translates to: PCLILQIHENRSEAGQQHQEGTT*NHPCLI
Trigger: AATCAGACATGGGTGATTCCATGTGGTCCCCTCTTG...GTGCTGTTGTCCTGCCTCAGATCTATTTTCATGTATTTGTAGGATCAGACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CCA 90 bp TTTGAAAACCATGTCTCCATTCCCTCTTGCACAGTGGAATCAGTTCATAGAAAAATCAGTGACATTCTCTaGGTTCAAGTGTGTAATGGC +
Preference number: 2 (lower is better)
Translates to: FENHVSIPSCTVESVHRKISDIL*VQVCNG
Trigger: GCCATTACACACTTGAACCCAGAGAATGTCACTGAT...TTTTCTATGAACTGATTCCACTGTGCAAGAGGGAATGGAGACATGGTTTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 72 bp CGCGCTTGCCAGCTGAGGAGAGAGCGTAGATACGGATaGAGGGGCTGTGCAGAGGACAGAGAGCACCGCTCC +
Preference number: 3 (lower is better)
Translates to: RACQLRRERRYG*RGCAEDREHRS
Trigger: GGAGCGGTGCTCTCTGTCCTCTGCACAGCCCCTTCATCCGTATCTACGCTCTCTCCTCAGCTGGCAAGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 72 bp GGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCTaGCATTTGGATGGGCTGGATGGGGTGCACGGGCTG +
Preference number: 3 (lower is better)
Translates to: GKLSLPLHGGER*HLDGLDGVHGL
Trigger: CAGCCCGTGCACCCCATCCAGCCCATCCAAATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 72 bp CTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTaGACGCTGGCATTTGGATGGGCTGGATGGGGTGCA +
Preference number: 3 (lower is better)
Translates to: LPRQALTSSARW*TLAFGWAGWGA
Trigger: TGCACCCCATCCAGCCCATCCAAATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 72 bp TTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTaGATCACAGGGACAGGCCCAGTGTTTCTCTCCAGT +
Preference number: 3 (lower is better)
Translates to: FRDWEAWPCWQK*ITGTGPVFLSS
Trigger: ACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
3UTR GCA 72 bp CATGGCTCTTACTGCTGCACGTCTCGCTGCTCTCGCTaGTTTCCGTGTTCCCTCCAAGCTGGCTGCTGCTCT +
Preference number: 3 (lower is better)
Translates to: HGSYCCTSRCSR*FPCSLQAGCCS
Trigger: AGAGCAGCAGCCAGCTTGGAGGGAACACGGAAAGCAGCGAGAGCAGCGAGACGTGCAGCAGTAAGAGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 72 bp CTCTGCACGGTGGTGAACGCTGGCATTTGGATGGGCTaGATGGGGTGCACGGGCTGGAACACTGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LCTVVNAGIWMG*MGCTGWNTVFF
Trigger: GAAGAAGACAGTGTTCCAGCCCGTGCACCCCATCCAGCCCATCCAAATGCCAGCGTTCACCACCGTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 72 bp CAGCACTACTTCCGTCTTCCTGCCACAATGTTCCCCTaGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACG +
Preference number: 3 (lower is better)
Translates to: QHYFRLPATMFP*PPEASSHFLCT
Trigger: CGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAGGGGAACATTGTGGCAGGAAGACGGAAGTAGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR-3UTR CAA 90 bp ATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCAGGCAGTCATGAGCCCAGGAGTTaGAAGCCTGCCTGGGCAAAC +
Preference number: 3 (lower is better)
Translates to: MPPDADTFGPCRTRSSGSHEPRS*KPAWAN
Trigger: GTTTGCCCAGGCAGGCTTCAAACTCCTGGGCTCATG...ACTGCCTGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CAA 90 bp CCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCAGGGAGGGGAAGGAGTaGTGTGTGGGGTGCAAGGAA +
Preference number: 3 (lower is better)
Translates to: PCWQKCITGTGPVFLSSLREGKE*CVGCKE
Trigger: TTCCTTGCACCCCACACACAACTCCTTCCCCTCCCT...GAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR-3UTR CAA 90 bp CTGGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCTGGCATAGCAAGTGTTTGCTTTaGGAGTTGTGGAGGCTCTGC +
Preference number: 3 (lower is better)
Translates to: LASRGKLSLPLHGGERWHSKCLL*ELWRLC
Trigger: GCAGAGCCTCCACAACTCCAAAAGCAAACACTTGCT...ATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 72 bp CGTACTCGCTCCTCAGGCAGTAGGCACTGCCCAGGTTaGAGAGCATCACAGTCCGGGCAGAGTTCACAGAAC +
Preference number: 3 (lower is better)
Translates to: RTRSSGSRHCPG*RASQSGQSSQN
Trigger: GTTCTGTGAACTCTGCCCGGACTGTGATGCTCTTCAACCTGGGCAGTGCCTACTGCCTGAGGAGCGAGTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 72 bp TCGCTGCTCTCGCTGCTTTCCGTGTTCCCTCCAAGCTaGCTGCTGCTCTTGGAGCCATTTTCCTGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: SLLSLLSVFPPS*LLLLEPFSCLG
Trigger: TCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACACGGAAAGCAGCGAGAGCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 72 bp TGCCGCTCGCTCGCCCACACTGTGAGCGTGCGTACCTaGTGTATCTTGGACTTGGCAGCCTCTATTAGAGCT +
Preference number: 3 (lower is better)
Translates to: CRSLAHTVSVRT*CILDLAASIRA
Trigger: AGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGGTACGCACGCTCACAGTGTGGGCGAGCGAGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
3UTR TCA 72 bp AGCACTCAAAAGGTCCAGCCAGGTCAGAGGATGGCATaGGCCCAGGAGTTTGAAGCCTGCCTGGGCAAACAG +
Preference number: 3 (lower is better)
Translates to: STQKVQPGQRMA*AQEFEACLGKQ
Trigger: CTGTTTGCCCAGGCAGGCTTCAAACTCCTGGGCTCATGCCATCCTCTGACCTGGCTGGACCTTTTGAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 72 bp TATCTCCATCATGGCTCTTACTGCTGCACGTCTCGCTaGTCTCGCTGCTTTCCGTGTTCCCTCCAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: YLHHGSYCCTSR*SRCFPCSLQAG
Trigger: GCCAGCTTGGAGGGAACACGGAAAGCAGCGAGAGCAGCGAGACGTGCAGCAGTAAGAGCCATGATGGAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 72 bp TCTCGCTGCTTTCCGTGTTCCCTCCAAGCTGGCTGCTaGTCTTGGAGCCATTTTCCTGCTTGGGATCTTGCT +
Preference number: 3 (lower is better)
Translates to: SRCFPCSLQAGC*SWSHFPAWDLA
Trigger: AGCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACACGGAAAGCAGCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CCA 72 bp GAAGACGGTGGAGCGGGAATGAACTTATCTCCATCATaGCTCTTACTGCTGCACGTCTCGCTGCTCTCGCTG +
Preference number: 3 (lower is better)
Translates to: EDGGAGMNLSPS*LLLLHVSLLSL
Trigger: CAGCGAGAGCAGCGAGACGTGCAGCAGTAAGAGCCATGATGGAGATAAGTTCATTCCCGCTCCACCGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CAA 90 bp AGAGAGCACCGCTCCACGCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGGAGCCATTTTCCTGCTaGGGATCTTGCTGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: REHRSTLSTWDKALLLRLEPFSC*GSCCSS
Trigger: TGAAGAACAGCAAGATCCCAAGCAGGAAAATGGCTC...CAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 72 bp CCTGTTTCCTCAGCGGAGAAGACGGTGGAGCGGGAATaGACTTATCTCCATCATGGCTCTTACTGCTGCACG +
Preference number: 3 (lower is better)
Translates to: PVSSAEKTVERE*TYLHHGSYCCT
Trigger: CGTGCAGCAGTAAGAGCCATGATGGAGATAAGTTCATTCCCGCTCCACCGTCTTCTCCGCTGAGGAAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 72 bp AGTGCGCCTTTACTGCGGGGAGCAGCTGGTTCCGCTTaGTCATCTGCAAGGCCAGCTGTGTATTACCATTCT +
Preference number: 3 (lower is better)
Translates to: SAPLLRGAAGSA*SSARPAVYYHS
Trigger: AGAATGGTAATACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTCCCCGCAGTAAAGGCGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 72 bp CACTGTCTTCTTCCTCACATCAGAGTGCGCCTTTACTaGGGGGAGCAGCTGGTTCCGCTTGATCATCTGCAA +
Preference number: 3 (lower is better)
Translates to: HCLLPHIRVRLY*GEQLVPLDHLQ
Trigger: TTGCAGATGATCAAGCGGAACCAGCTGCTCCCCGCAGTAAAGGCGCACTCTGATGTGAGGAAGAAGACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 72 bp CATCGACTCATATTTGAATGCTTCATCTTCAGGGAGTaGCACTTCAGGGACTGGGAGGCGTGGCCTTGCTGG +
Preference number: 3 (lower is better)
Translates to: HRLIFECFIFRE*HFRDWEAWPCW
Trigger: CCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGCATTCAAATATGAGTCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
3UTR GCA 72 bp TTTACTGCGGGGAGCAGCTGGTTCCGCTTGATCATCTaGAAGGCCAGCTGTGTATTACCATTCTGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: FTAGSSWFRLII*KASCVLPFCSS
Trigger: TGAGCTGCAGAATGGTAATACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTCCCCGCAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 72 bp CTTTTCAAAGGTCTGGTGATGACACAGCTCAGCCACTaGGTCATTGAGGGTAGGCTTGGGTGCACCTTGTCT +
Preference number: 3 (lower is better)
Translates to: LFKGLVMTQLSH*VIEGRLGCTLS
Trigger: AGACAAGGTGCACCCAAGCCTACCCTCAATGACTCAGTGGCTGAGCTGTGTCATCACCAGACCTTTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
3UTR CCA 72 bp CTGTCGAGGGAGATGAGGGCTTCTGCGGCATATAAATaGCCCAAAAATTTAAGAGAGCCAGACAGCTTGGGC +
Preference number: 3 (lower is better)
Translates to: LSREMRASAAYK*PKNLREPDSLG
Trigger: GCCCAAGCTGTCTGGCTCTCTTAAATTTTTGGGCCATTTATATGCCGCAGAAGCCCTCATCTCCCTCGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 72 bp GAGCCACATAAGCACTGCAAGCAAGGATGGAGCACTTaGGGTTTTCTAACTCCTGTTTCCTCAGCGGAGAAG +
Preference number: 3 (lower is better)
Translates to: EPHKHCKQGWST*GFLTPVSSAEK
Trigger: CTTCTCCGCTGAGGAAACAGGAGTTAGAAAACCTCAAGTGCTCCATCCTTGCTTGCAGTGCTTATGTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CAA 90 bp CAAATATCTGCAATCCTAGCACTCAAAAGGTCCAGCCAGGTCAGAGGATGGCATCTTGGTCCTGCTCATTaGAAGAGATCCCTAAGGAGA +
Preference number: 3 (lower is better)
Translates to: QISAILALKRSSQVRGWHLGPAH*KRSLRR
Trigger: TCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAG...ATGCCATCCTCTGACCTGGCTGGACCTTTTGAGTGCTAGGATTGCAGATATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CAA 90 bp AGGGAGATGAGGGCTTCTGCGGCATATAAATGGCCCAAAAATTTAAGAGAGCCAGAGCCATTTTCCTGCTaGGGATCTTGCTGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: REMRASAAYKWPKNLREPEPFSC*GSCCSS
Trigger: TGAAGAACAGCAAGATCCCAAGCAGGAAAATGGCTC...TGGCTCTCTTAAATTTTTGGGCCATTTATATGCCGCAGAAGCCCTCATCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR-3UTR CAA 90 bp TTTGAAAACCATGTCTCCATTCCCTCTTGCACAGTGGAATCAGTTCATAGAAAAAGCTGGCTGCTGCTCTaGGAGCCATTTTCCTGCTTG +
Preference number: 3 (lower is better)
Translates to: FENHVSIPSCTVESVHRKSWLLL*EPFSCL
Trigger: CAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCT...TTTTCTATGAACTGATTCCACTGTGCAAGAGGGAATGGAGACATGGTTTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR TCA 72 bp CGACGTGAACAAGAATGGCTCTCATCGACTCATATTTaGATGCTTCATCTTCAGGGAGTGACACTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: RREQEWLSSTHI*MLHLQGVTLQG
Trigger: TCCCTGAAGTGTCACTCCCTGAAGATGAAGCATTCAAATATGAGTCGATGAGAGCCATTCTTGTTCACGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
3UTR-3UTR CAA 90 bp AGGGAGATGAGGGCTTCTGCGGCATATAAATGGCCCAAAAATTTAAGAGAGCCACTCATCGACTCATATTaGAATGCTTCATCTTCAGGG +
Preference number: 3 (lower is better)
Translates to: REMRASAAYKWPKNLREPLIDSY*NASSSG
Trigger: CCCTGAAGATGAAGCATTCAAATATGAGTCGATGAG...TGGCTCTCTTAAATTTTTGGGCCATTTATATGCCGCAGAAGCCCTCATCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR CCA 72 bp CCAAGTAGGAACTTAACAAGAGCAAGTGTTTGCTTTTaGAGTTGTGGAGGCTCTGCTAAAGGTATCAGGATG +
Preference number: 3 (lower is better)
Translates to: PSRNLTRASVCF*SCGGSAKGIRM
Trigger: CATCCTGATACCTTTAGCAGAGCCTCCACAACTCCAAAAGCAAACACTTGCTCTTGTTAAGTTCCTACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR GCA 72 bp AGATCTCATTACGAATGGTTTCAGACACCATGTGATTaGTGGGATTTGAACTCTGGACTTTCAGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: RSHYEWFQTPCD*WDLNSGLSEEQ
Trigger: CTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAATCACATGGTGTCTGAAACCATTCGTAATGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
3UTR-3UTR CAA 90 bp CAACAAAAACCAAAGCAAAAATTCTTTATAACAGTCTTGAGTGCTGGGTCCAACAGACAGTGTTCTGAATaGACTGTGATGCCAGAACTA +
Preference number: 3 (lower is better)
Translates to: QQKPKQKFFITVLSAGSNRQCSE*TVMPEL
Trigger: TAGTTCTGGCATCACAGTCAATTCAGAACACTGTCT...GTTGGACCCAGCACTCAAGACTGTTATAAAGAATTTTTGCTTTGGTTTTTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR TCA 72 bp CTTACAGGATTCCATTGCTTCATTTTCACCCTTGTCTaGTCCTACAAATACATGAAAATAGATCTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: LTGFHCFIFTLV*SYKYMKIDLRQ
Trigger: CTGCCTCAGATCTATTTTCATGTATTTGTAGGATCAGACAAGGGTGAAAATGAAGCAATGGAATCCTGTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp CAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATAGAGGCCTCCCGACGTaGAGCAGCTGGATCCCACAG +
Preference number: 4 (lower is better)
Translates to: QGVTLQGLGGVALLAEVHRGLPT*SSWIPQ
Trigger: CTGTGGGATCCAGCTGCTGCACGTCGGGAGGCCTCT...ATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp GGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTGGCATTTGGATGGGCTaGATGGGGTGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGVALLAEVHHRDRPSVSGIWMG*MGCTGW
Trigger: CCAGCCCGTGCACCCCATCCAGCCCATCCAAATGCC...AGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
3UTR CAA 72 bp CAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTaGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QGVTLQGLGGVA*LAEVHHRDRPS
Trigger: ACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp CTGGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCTGGCATTGCTTCTCTGCTCCCTaGTCTGCAGGCTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LASRGKLSLPLHGGERWHCFSAP*SAGLSA
Trigger: TGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAGCA...ATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp CAGAGAGCACCGCTCCACGCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGTCCGTGACCCCAGATaGTTGGCCTGCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: QRAPLHAEHLGQSTTPQAVRDPR*LACPFM
Trigger: CATGAAGGGGCAGGCCAATCATCTGGGGTCACGGAC...AGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GTTCCCCTGGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCAGGACGGCAAGAAGATaGAGAGCTTTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPLASRGKLSLPLHGGERRTARR*RAFSAW
Trigger: CCAGGCTGAGAAAGCTCTGCATCTTCTTGCCGTCCT...GCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp CAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATGAGAGCCAGACAGCTTaGGCTGCTGCAGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QGVTLQGLGGVALLAEVHESQTA*AAAGAD
Trigger: ATCAGCTCCTGCAGCAGCCCAAGCTGTCTGGCTCTC...ATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR TCA 90 bp CAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCAGGCACTGCCCAGGTTaGAGAGCATCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QKCITGTGPVFLSSLLSSRHCPG*RASQSG
Trigger: CCCGGACTGTGATGCTCTTCAACCTGGGCAGTGCCT...GCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp TGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCAGAGTGCGCCTTTACTaGGGGGAGCAGCTGGTTCCG +
Preference number: 4 (lower is better)
Translates to: CWQKCITGTGPVFLSSLLRVRLY*GEQLVP
Trigger: CGGAACCAGCTGCTCCCCGCAGTAAAGGCGCACTCT...GAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp CAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCATGGGCTGGATGGGGTaGACGGGCTGGAACACTGTC +
Preference number: 4 (lower is better)
Translates to: QKCITGTGPVFLSSLLSSMGWMG*TGWNTV
Trigger: GACAGTGTTCCAGCCCGTGCACCCCATCCAGCCCAT...GCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp TCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGTGTTCCCTCCAAGCTaGCTGCTGCTCTTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSGSDTSGTGRRGLAGRSVFPPS*LLLLEP
Trigger: TGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACAC...ACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp TGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCAGACAGCCAGCAGGATaGCTTCAGGGGGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: CWQKCITGTGPVFLSSLLRQPAG*LQGAPP
Trigger: AGGAGGTGCCCCCTGAAGCCATCCTGCTGGCTGTCT...GAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp CCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCACGCTGGCATTTGGATaGGCTGGATGGGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: PCWQKCITGTGPVFLSSLTLAFG*AGWGAR
Trigger: CCGTGCACCCCATCCAGCCCATCCAAATGCCAGCGT...GAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR TCA 90 bp TCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGATGCTTCTCTGCTCCCTaGTCTGCAGGCTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSSGSDTSGTGRRGLAGRCFSAP*SAGLSA
Trigger: TGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAGCA...TCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp ATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTACTTCCGTCCGTGACCCCAGATaGTTGGCCTGCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: ITGTGPVFLSSLLSSTTSVRDPR*LACPFM
Trigger: CATGAAGGGGCAGGCCAATCATCTGGGGTCACGGAC...GGAAGTAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp AATGCTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGTCCGTGACCCCAGATaGTTGGCCTGCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: NASSSGSDTSGTGRRGLAVRDPR*LACPFM
Trigger: CATGAAGGGGCAGGCCAATCATCTGGGGTCACGGAC...AGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp TCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTCATAATTTCCAGACGTaGAGGCCTGGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SSGSDTSGTGRRGLAGRSHNFQT*RPGGHW
Trigger: CCAGTGCCCTCCAGGCCTTCACGTCTGGAAATTATG...ACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp AGAGAGCACCGCTCCACGCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGCATAATTTCCAGACGTaGAGGCCTGGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: REHRSTLSTWDKALLLRLHNFQT*RPGGHW
Trigger: CCAGTGCCCTCCAGGCCTTCACGTCTGGAAATTATG...CAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp ATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCAGGCAGTGTGACCCCAGATGATTaGCCTGCCCCTTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: MPPDADTFGPCRTRSSGSVTPDD*PAPSCF
Trigger: GAAGCATGAAGGGGCAGGCCAATCATCTGGGGTCAC...ACTGCCTGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp TGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTGCTTCTCTGCTCCCTaGTCTGCAGGCTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: CWQKCITGTGPVFLSSLLCFSAP*SAGLSA
Trigger: TGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAGCA...GAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp GATCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCATAATTTCCAGACGTaGAGGCCTGGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: DHRCRLMQTLSGLVVLAPHNFQT*RPGGHW
Trigger: CCAGTGCCCTCCAGGCCTTCACGTCTGGAAATTATG...AGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp AATGCTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTTCCTCTGCACGGTGGTaGACGCTGGCATTTGGATGG +
Preference number: 4 (lower is better)
Translates to: NASSSGSDTSGTGRRGLASSARW*TLAFGW
Trigger: CCATCCAAATGCCAGCGTTCACCACCGTGCAGAGGA...AGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR TCA 90 bp GCTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTCTGTCTTCATaGAGCCTGGATGCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: ASSSGSDTSGTGRRGLAGRSLSS*SLDARQ
Trigger: TTGCCGAGCATCCAGGCTTCATGAAGACAGACTTCT...GCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp TCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGACCCTTCATGCTTCTCTaGTCCCTGATCTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSSGSDTSGTGRRGLAGRPFMLL*SLICRL
Trigger: AAGCCTGCAGATCAGGGAGCAGAGAAGCATGAAGGG...TCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GAGCAGCTGGTTCCGCTTGATCATCTGCAAGGCCAGCTGTGTATTACCATTCTGAGAGGCCTCCCGACGTaGAGCAGCTGGATCCCACAG +
Preference number: 4 (lower is better)
Translates to: EQLVPLDHLQGQLCITILRGLPT*SSWIPQ
Trigger: CTGTGGGATCCAGCTGCTGCACGTCGGGAGGCCTCT...CAGAATGGTAATACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR CCA 90 bp GGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGTGACCCCAGATGATTaGCCTGCCCCTTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: GRSASQGQAQCFSPVSSPVTPDD*PAPSCF
Trigger: GAAGCATGAAGGGGCAGGCCAATCATCTGGGGTCAC...TGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
3UTR CAA 72 bp TGCAGAGGACAGAGAGCACCGCTCCACGCTGAGCACTaGGGACAAAGCACTACTCCTCAGGCTGACAGATAC +
Preference number: 4 (lower is better)
Translates to: CRGQRAPLHAEH*GQSTTPQADRY
Trigger: GTATCTGTCAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCTGTCCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp TCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAATTCACCTGTCTTCATaGAGCCTGGATGCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: SSSGSDTSGTGRRGLAGRIHLSS*SLDARQ
Trigger: TTGCCGAGCATCCAGGCTTCATGAAGACAGGTGAAT...TCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp CAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCAGGACGGCAAGAAGATaGAGAGCTTTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QKCITGTGPVFLSSLLSSRTARR*RAFSAW
Trigger: CCAGGCTGAGAAAGCTCTGCATCTTCTTGCCGTCCT...GCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GATCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTAGGACGGCAAGAAGATaGAGAGCTTTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DHRCRLMQTLSGLVVLAPRTARR*RAFSAW
Trigger: CCAGGCTGAGAAAGCTCTGCATCTTCTTGCCGTCCT...AGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATAGAGGCCTCCCGACGTaGAGCAGCTGGATCCCACAG +
Preference number: 4 (lower is better)
Translates to: VLLTAESSLQSQVSSAFHRGLPT*SSWIPQ
Trigger: CTGTGGGATCCAGCTGCTGCACGTCGGGAGGCCTCT...ATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp TGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCCTCCAAGCTGGCTaGTGCTCTTGGAGCCATTTT +
Preference number: 4 (lower is better)
Translates to: CWQKCITGTGPVFLSSLLSLQAG*CSWSHF
Trigger: AAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGA...GAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp TCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAGAGCCACATAAGCACTaGAAGCAAGGATGGAGCACT +
Preference number: 4 (lower is better)
Translates to: SSSGSDTSGTGRRGLAGREPHKH*KQGWST
Trigger: AGTGCTCCATCCTTGCTTGCAGTGCTTATGTGGCTC...TCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp CAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATAGAAAACTTTTTGCCTaGATCAGTGCCACCCGCACT +
Preference number: 4 (lower is better)
Translates to: QGVTLQGLGGVALLAEVHRKLFA*ISATRT
Trigger: AGTGCGGGTGGCACTGATCCAGGCAAAAAGTTTTCT...ATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp GGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCACTGGCTACAGGAATaGCTGAAGACTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: GGVALLAEVHHRDRPSVSHWLQE*LKTDHH
Trigger: ATGATGGTCAGTCTTCAGCCATTCCTGTAGCCAGTG...AGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp GTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGCTGCAAACTCCACACTaGCTACAGGAATGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VALLAEVHHRDRPSVSLQLQTPH*LQEWLK
Trigger: CTTCAGCCATTCCTGTAGCCAGTGTGGAGTTTGCAG...CTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
3UTR CAA 72 bp GAGTGCGCCTTTACTGCGGGGAGCAGCTGGTTCCGCTaGATCATCTGCAAGGCCAGCTGTGTATTACCATTC +
Preference number: 4 (lower is better)
Translates to: ECAFTAGSSWFR*IICKASCVLPF
Trigger: GAATGGTAATACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTCCCCGCAGTAAAGGCGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 72 bp CTCGCCCACACTGTGAGCGTGCGTACCTGGTGTATCTaGGACTTGGCAGCCTCTATTAGAGCTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: LAHTVSVRTWCI*DLAASIRAALS
Trigger: TGAGAGTGCAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGGTACGCACGCTCACAGTGTGGGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR TCA 90 bp TCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCAACAGCCGAGTGGACCTaGTTCTTCAGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SSMPPDADTFGPCRTRSSTAEWT*FFSWLS
Trigger: ACTTAACCAGCTGAAGAATCAGGTCCACTCGGCTGT...TGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp GCTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCTCTGGATGTACCCTCTaGCTTTGTACTGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: ASSSGSDTSGTGRRGLAGSGCTL*LCTGVS
Trigger: AGATACACCAGTACAAAGTCAGAGGGTACATCCAGA...GCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp GATCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTATTCACCTGTCTTCATaGAGCCTGGATGCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: DHRCRLMQTLSGLVVLAPIHLSS*SLDARQ
Trigger: TTGCCGAGCATCCAGGCTTCATGAAGACAGGTGAAT...AGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR TCA 90 bp GGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCCTGCAGAGCCTTCTTaGAGTAGAAAATCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GGVALLAEVHHRDRPSVSPAEPS*SRKSPN
Trigger: ATTTGGGGATTTTCTACTTCAAGAAGGCTCTGCAGG...AGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp GTTCCCCTGGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCTCTTTGTTTATATCTTaGAGACAGGCAAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VPLASRGKLSLPLHGGERSLFIS*RQARCC
Trigger: GCAACACCTTGCCTGTCTCCAAGATATAAACAAAGA...GCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
3UTR CAA 72 bp CTGCTTTCCGTGTTCCCTCCAAGCTGGCTGCTGCTCTaGGAGCCATTTTCCTGCTTGGGATCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLSVFPPSWLLL*EPFSCLGSCCS
Trigger: AGAACAGCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAACACGGAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp CAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTGCTTCTCTGCTCCCTaGTCTGCAGGCTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QSVLLTAESSLQSQVSSACFSAP*SAGLSA
Trigger: TGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAGCA...AGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR TCA 90 bp GAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTCATAATTTCCAGACGTaGAGGCCTGGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: EQSVLLTAESSLQSQVSSHNFQT*RPGGHW
Trigger: CCAGTGCCCTCCAGGCCTTCACGTCTGGAAATTATG...AGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR TCA 90 bp AGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTAACAGCCGAGTGGACCTaGTTCTTCAGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SASQGQAQCFSPVSSPALTAEWT*FFSWLS
Trigger: ACTTAACCAGCTGAAGAATCAGGTCCACTCGGCTGT...TAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp AGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTATTCGCGTGGTACACCTaGACAGCTTCAATCAGACAC +
Preference number: 4 (lower is better)
Translates to: SASQGQAQCFSPVSSPALFAWYT*TASIRH
Trigger: GTGTCTGATTGAAGCTGTTCAGGTGTACCACGCGAA...TAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR TCA 90 bp TTCCCTCCAAGCTGGCTGCTGCTCTTGGAGCCATTTTCCTGCTTGGGATCTTGCTTCGCGTGGTACACCTaGACAGCTTCAATCAGACAC +
Preference number: 4 (lower is better)
Translates to: FPPSWLLLLEPFSCLGSCFAWYT*TASIRH
Trigger: GTGTCTGATTGAAGCTGTTCAGGTGTACCACGCGAA...GCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR TCA 90 bp CCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCGGCTACAGGAATGGCTaGAGACTGACCATCATTGTA +
Preference number: 4 (lower is better)
Translates to: PCWQKCITGTGPVFLSSLGYRNG*RLTIIV
Trigger: TACAATGATGGTCAGTCTTCAGCCATTCCTGTAGCC...GAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp GACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGAAAGAAACAGGGAAGGTaGAGAATTTCCAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: DTSGTGRRGLAGRSASQGKKQGR*RISSCV
Trigger: AACACAGCTGGAAATTCTGCACCTTCCCTGTTTCTT...TCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp CAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATTTCATGAAGCCTGGATaGTCGGCAATGTTTGAACTA +
Preference number: 4 (lower is better)
Translates to: QGVTLQGLGGVALLAEVHFMKPG*SAMFEL
Trigger: TAGTTCAAACATTGCCGAGCATCCAGGCTTCATGAA...ATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTTTCATGAAGCCTGGATaGTCGGCAATGTTTGAACTA +
Preference number: 4 (lower is better)
Translates to: GGVALLAEVHHRDRPSVSFMKPG*SAMFEL
Trigger: TAGTTCAAACATTGCCGAGCATCCAGGCTTCATGAA...AGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GCTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCGGTTATTCCAGAACATaGATCTCAAGCATTCACCTG +
Preference number: 4 (lower is better)
Translates to: ASSSGSDTSGTGRRGLAGGYSRT*ISSIHL
Trigger: CAGGTGAATGCTTGAGATGCATGTTCTGGAATAACC...GCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp TCTCTCCAGTCTCCTCTCCAGCACTACTTCCGTCTTCCTGCCACAATGTTCCCCCTTTATTGGCAGCAATaGAGCACTCAGCCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: SLQSPLQHYFRLPATMFPLYWQQ*STQPAV
Trigger: TACGGCTGGCTGAGTGCTGCATTGCTGCCAATAAAG...GGGGAACATTGTGGCAGGAAGACGGAAGTAGTGCTGGAGAGGAGACTGGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp CAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTGTGACCCCAGATGATTaGCCTGCCCCTTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: QSVLLTAESSLQSQVSSAVTPDD*PAPSCF
Trigger: GAAGCATGAAGGGGCAGGCCAATCATCTGGGGTCAC...AGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CCA 90 bp CTGGCCTCCCGAGGCAAGCTCTCACTTCCTCTGCACGGTGGTGAACGCTGGCATTCTTTGTTTATATCTTaGAGACAGGCAAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LASRGKLSLPLHGGERWHSLFIS*RQARCC
Trigger: GCAACACCTTGCCTGTCTCCAAGATATAAACAAAGA...ATGCCAGCGTTCACCACCGTGCAGAGGAAGTGAGAGCTTGCCTCGGGAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp GGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGGTGTATCTTGGACTTaGCAGCCTCTATTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GRSASQGQAQCFSPVSSPGVSWT*QPLLEL
Trigger: CAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACC...TGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp TCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCAAGAAAACTTTTTGCCTaGATCAGTGCCACCCGCACT +
Preference number: 4 (lower is better)
Translates to: SSMPPDADTFGPCRTRSSRKLFA*ISATRT
Trigger: AGTGCGGGTGGCACTGATCCAGGCAAAAAGTTTTCT...TGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
3UTR CAA 72 bp CACACTGTGAGCGTGCGTACCTGGTGTATCTTGGACTaGGCAGCCTCTATTAGAGCTGCACTCTCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: HTVSVRTWCILD*AASIRAALSAL
Trigger: TAAGGCTGAGAGTGCAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGGTACGCACGCTCACAGTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR TCA 90 bp TTGGCAGCCTCTATTAGAGCTGCACTCTCAGCCTTAGGGTTGGATCCATCTTTGTGCTTCTCTGCTCCCTaGTCTGCAGGCTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LAASIRAALSALGLDPSLCFSAP*SAGLSA
Trigger: TGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAGCA...CAAAGATGGATCCAACCCTAAGGCTGAGAGTGCAGCTCTAATAGAGGCTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR TCA 90 bp AGGACGGCAAGAAGATGCAGAGCTTTCTCAGCCTGGTGGGTTAATATATACAAGGTCCGTGACCCCAGATaGTTGGCCTGCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: RTARRCRAFSAWWVNIYKVRDPR*LACPFM
Trigger: CATGAAGGGGCAGGCCAATCATCTGGGGTCACGGAC...CTTGTATATATTAACCCACCAGGCTGAGAAAGCTCTGCATCTTCTTGCCGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR TCA 90 bp AGAGCTGCACTCTCAGCCTTAGGGTTGGATCCATCTTTGCTGCTGTTATTGCCACATAATTTCCAGACGTaGAGGCCTGGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RAALSALGLDPSLLLLLPHNFQT*RPGGHW
Trigger: CCAGTGCCCTCCAGGCCTTCACGTCTGGAAATTATG...TGGCAATAACAGCAGCAAAGATGGATCCAACCCTAAGGCTGAGAGTGCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR TCA 90 bp GATCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTTCTGGATGTACCCTCTaGCTTTGTACTGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: DHRCRLMQTLSGLVVLAPSGCTL*LCTGVS
Trigger: AGATACACCAGTACAAAGTCAGAGGGTACATCCAGA...AGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACCTTTGCTGCTGTTATTaGCAGTCTCGTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: EVHHRDRPSVSLQSPLQHLCCCY*QSRSSH
Trigger: ATGGGAAGAACGAGACTGGCAATAACAGCAGCAAAG...GTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGGTTGGATCCATCTTTaGTGCTGTTATTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GRSASQGQAQCFSPVSSPGWIHL*CCYCQS
Trigger: AGACTGGCAATAACAGCAGCAAAGATGGATCCAACC...TGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTTGGAGCCATTTTCCTaGTTGGGATCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: EVHHRDRPSVSLQSPLQHLEPFS*LGSCCS
Trigger: AGAACAGCAAGATCCCAAGCAGGAAAATGGCTCCAA...GTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp TGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCTGATCCTTGGTCCTaGTCATTTGAAGAGATCCCT +
Preference number: 4 (lower is better)
Translates to: CWQKCITGTGPVFLSSLLSDPWS*SFEEIP
Trigger: AGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGA...GAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp GCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGGCCAGAGGATTCCATTaGTTCATTTTCACCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AEVHHRDRPSVSLQSPLQARGFH*FIFTLV
Trigger: GACAAGGGTGAAAATGAAGCAATGGAATCCTCTGGC...CTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp TTTGCTGCTGTTATTGCCAGTCTCGTTCTTCCCATTTTTGCCACCGCTACCCTGGTGACCCCAGATGATTaGCCTGCCCCTTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: FAAVIASLVLPIFATATLVTPDD*PAPSCF
Trigger: GAAGCATGAAGGGGCAGGCCAATCATCTGGGGTCAC...CAGGGTAGCGGTGGCAAAAATGGGAAGAACGAGACTGGCAATAACAGCAGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR CCA 90 bp TTCCCTCCAAGCTGGCTGCTGCTCTTGGAGCCATTTTCCTGCTTGGGATCTTGCGGTGTATCTTGGACTTaGCAGCCTCTATTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPPSWLLLLEPFSCLGSCGVSWT*QPLLEL
Trigger: CAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACC...GCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp TTTACTGCGGGGAGCAGCTGGTTCCGCTTGATCATCTGCAAGGCCAGCTGTGTAGGTGTATCTTGGACTTaGCAGCCTCTATTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FTAGSSWFRLIICKASCVGVSWT*QPLLEL
Trigger: CAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACC...TACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTCCCCGCAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp GTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTGTACTGGTGTATCTTaGACTTGGCAGCCTCTATTA +
Preference number: 4 (lower is better)
Translates to: VALLAEVHHRDRPSVSLQCTGVS*TWQPLL
Trigger: TAATAGAGGCTGCCAAGTCCAAGATACACCAGTACA...CTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp CCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCTTCAGGGACTTCATCTaGATGTACCCTCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: PCWQKCITGTGPVFLSSLFRDFI*MYPLTL
Trigger: CAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAA...GAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp GCTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCGCTCATATCTTTTGTTaGTCAGCAATGTACACATGG +
Preference number: 4 (lower is better)
Translates to: ASSSGSDTSGTGRRGLAGAHIFC*SAMYTW
Trigger: CCATGTGTACATTGCTGACCAACAAAAGATATGAGC...GCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp AAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTCAGAAGTCCCTTTATTaGCAGCAATGCAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: KCITGTGPVFLSSLLSSTQKSLY*QQCSTQ
Trigger: CTGAGTGCTGCATTGCTGCCAATAAAGGGACTTCTG...AGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp TCTCTCCAGTCTCCTCTCCAGCACTACTTCCGTCTTCCTGCCACAATGTTCCCCCCCTTGTCTGATCCTTaGTCCTGCTCATTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLQSPLQHYFRLPATMFPPLSDP*SCSFEE
Trigger: CTCTTCAAATGAGCAGGACCAAGGATCAGACAAGGG...GGGGAACATTGTGGCAGGAAGACGGAAGTAGTGCTGGAGAGGAGACTGGAGAGA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR TCA 90 bp GTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAGAGGTCCGTGACCCCAGATaGTTGGCCTGCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: VPSIFCFPCTKCRRGETEVRDPR*LACPFM
Trigger: CATGAAGGGGCAGGCCAATCATCTGGGGTCACGGAC...CTCTGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR TCA 90 bp AAGTGTGTAATGGCATCAGATATCCTGTCGAGGGAGATGAGGGCTTCTGCGGCAACAGCCGAGTGGACCTaGTTCTTCAGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: KCVMASDILSREMRASAATAEWT*FFSWLS
Trigger: ACTTAACCAGCTGAAGAATCAGGTCCACTCGGCTGT...TGCCGCAGAAGCCCTCATCTCCCTCGACAGGATATCTGATGCCATTACACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp TCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCAGATGATAGAGAATaGCAGCCTGGTTATAATACA +
Preference number: 4 (lower is better)
Translates to: SSGSDTSGTGRRGLAGRSADDRE*QPGYNT
Trigger: TGTATTATAACCAGGCTGTCATTCTCTATCATCTGC...ACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp TCAGAAGAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTAATTCACCTGTCTTCATaGAGCCTGGATGCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: SEEQSVLLTAESSLQSQVIHLSS*SLDARQ
Trigger: TTGCCGAGCATCCAGGCTTCATGAAGACAGGTGAAT...TACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR TCA 90 bp AGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTACTAAGGAGACATCAGTaGCATTCTCTGGGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SASQGQAQCFSPVSSPALLRRHQ*HSLGSS
Trigger: ACTTGAACCCAGAGAATGTCACTGATGTCTCCTTAG...TAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp AAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTTGGATCCATCTTTGCTaGTGTTATTGCCAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: KCITGTGPVFLSSLLSSTWIHLC*CYCQSR
Trigger: ACGAGACTGGCAATAACAGCAGCAAAGATGGATCCA...AGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAAAGAAACAGGGAAGGTaGAGAATTTCCAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GRSASQGQAQCFSPVSSPKKQGR*RISSCV
Trigger: AACACAGCTGGAAATTCTGCACCTTCCCTGTTTCTT...TGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCCGCTTTTCGATAGTTaGCCCTTAAGTACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: AEVHHRDRPSVSLQSPLQPLFDS*PLSTQS
Trigger: ACTTTGAGTACTTAAGGGGCAACTATCGAAAAGCGG...CTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCATCCCCAAATTGTGCTTaGTCATGGCAAAATGGATAC +
Preference number: 4 (lower is better)
Translates to: GRSASQGQAQCFSPVSSPSPNCA*SWQNGY
Trigger: GTATCCATTTTGCCATGAGCAAGCACAATTTGGGGA...TGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp CAGCTTGGGCTGCTGCAGGAGCTGATCTGCATGGTTCAAAGCCATGAGGTTATCTTCCAGAAAACTTTTTaGCTGGATCAGTGCCACCCG +
Preference number: 4 (lower is better)
Translates to: QLGLLQELICMVQSHEVIFQKTF*LDQCHP
Trigger: CGGGTGGCACTGATCCAGGCAAAAAGTTTTCTGGAA...GATAACCTCATGGCTTTGAACCATGCAGATCAGCTCCTGCAGCAGCCCAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR GCA 90 bp AAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTTTCCGCTTGATCATCTaGAAGGCCAGCTGTGTATTA +
Preference number: 4 (lower is better)
Translates to: KCITGTGPVFLSSLLSSTFRLII*KASCVL
Trigger: TAATACACAGCTGGCCTTGCAGATGATCAAGCGGAA...AGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp TCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCTTTCTCAGCCTGGTaGGTTAATATATACAAGTCT +
Preference number: 4 (lower is better)
Translates to: SSGSDTSGTGRRGLAGRSAFSAW*VNIYKS
Trigger: AGACTTGTATATATTAACCCACCAGGCTGAGAAAGC...ACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp ACGCAGGACACAGAGATGCAGGGTCTAAGTCTTTGGGATGCAGGCCAGGCTACTTTCAGGGACTTCATCTaGATGTACCCTCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: TQDTEMQGLSLWDAGQATFRDFI*MYPLTL
Trigger: CAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAA...AGTAGCCTGGCCTGCATCCCAAAGACTTAGACCCTGCATCTCTGTGTCCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp GGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTTTGCTCATGGCAAAATaGATACAACCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: GGVALLAEVHHRDRPSVSLLMAK*IQPRLF
Trigger: GAATAACCTTGGTTGTATCCATTTTGCCATGAGCAA...AGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp GACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGAAATTGTGCTTGCTCATaGCAAAATGGATACAACCAA +
Preference number: 4 (lower is better)
Translates to: DTSGTGRRGLAGRSASQGNCACS*QNGYNQ
Trigger: TTGGTTGTATCCATTTTGCCATGAGCAAGCACAATT...TCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp GAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACATCAGTGACATTCTCTaGGTTCAAGTGTGTAATGGC +
Preference number: 4 (lower is better)
Translates to: EVHHRDRPSVSLQSPLQHISDIL*VQVCNG
Trigger: GCCATTACACACTTGAACCCAGAGAATGTCACTGAT...GTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
3UTR CAA 72 bp GCAGCCTCTATTAGAGCTGCACTCTCAGCCTTAGGGTaGGATCCATCTTTGCTGCTGTTATTGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: AASIRAALSALG*DPSLLLLLPVS
Trigger: CGAGACTGGCAATAACAGCAGCAAAGATGGATCCAACCCTAAGGCTGAGAGTGCAGCTCTAATAGAGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR TCA 90 bp GTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATTTCGCGTGGTACACCTaGACAGCTTCAATCAGACAC +
Preference number: 4 (lower is better)
Translates to: VLLTAESSLQSQVSSAFHFAWYT*TASIRH
Trigger: GTGTCTGATTGAAGCTGTTCAGGTGTACCACGCGAA...ATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp CAAATATCTGCAATCCTAGCACTCAAAAGGTCCAGCCAGGTCAGAGGATGGCATCCCTTCATGCTTCTCTaGTCCCTGATCTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QISAILALKRSSQVRGWHPFMLL*SLICRL
Trigger: AAGCCTGCAGATCAGGGAGCAGAGAAGCATGAAGGG...ATGCCATCCTCTGACCTGGCTGGACCTTTTGAGTGCTAGGATTGCAGATATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp AGCACTTGGGACAAAGCACTACTCCTCAGGCTGACAGATACACGCAGGACACAGCTTTGCTGCTGTTATTaGCAGTCTCGTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: STWDKALLLRLTDTRRTQLCCCY*QSRSSH
Trigger: ATGGGAAGAACGAGACTGGCAATAACAGCAGCAAAG...CTGTGTCCTGCGTGTATCTGTCAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGACAGATACACGCAGGACCCGCTTTTCGATAGTTaGCCCTTAAGTACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: AEHLGQSTTPQADRYTQDPLFDS*PLSTQS
Trigger: ACTTTGAGTACTTAAGGGGCAACTATCGAAAAGCGG...GTCCTGCGTGTATCTGTCAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp CTGCTGCTCTTGGAGCCATTTTCCTGCTTGGGATCTTGCTGTTCTTCAGGTAACCTTTATTGGCAGCAATaGAGCACTCAGCCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: LLLLEPFSCLGSCCSSGNLYWQQ*STQPAV
Trigger: TACGGCTGGCTGAGTGCTGCATTGCTGCCAATAAAG...GTTACCTGAAGAACAGCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR CCA 90 bp GAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTCTTTGTTTATATCTTaGAGACAGGCAAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: EVHHRDRPSVSLQSPLQHSLFIS*RQARCC
Trigger: GCAACACCTTGCCTGTCTCCAAGATATAAACAAAGA...GTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp TTCCCTCCAAGCTGGCTGCTGCTCTTGGAGCCATTTTCCTGCTTGGGATCTTGCTGTACTGGTGTATCTTaGACTTGGCAGCCTCTATTA +
Preference number: 4 (lower is better)
Translates to: FPPSWLLLLEPFSCLGSCCTGVS*TWQPLL
Trigger: TAATAGAGGCTGCCAAGTCCAAGATACACCAGTACA...GCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp TCAGAAGAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTAAGAAAACTTTTTGCCTaGATCAGTGCCACCCGCACT +
Preference number: 4 (lower is better)
Translates to: SEEQSVLLTAESSLQSQVRKLFA*ISATRT
Trigger: AGTGCGGGTGGCACTGATCCAGGCAAAAAGTTTTCT...TACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTCTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR TCA 90 bp GAGCAGCTGGTTCCGCTTGATCATCTGCAAGGCCAGCTGTGTATTACCATTCTGTCTGGATGTACCCTCTaGCTTTGTACTGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: EQLVPLDHLQGQLCITILSGCTL*LCTGVS
Trigger: AGATACACCAGTACAAAGTCAGAGGGTACATCCAGA...CAGAATGGTAATACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp AAGTGTGTAATGGCATCAGATATCCTGTCGAGGGAGATGAGGGCTTCTGCGGCACCTGCAGAGCCTTCTTaGAGTAGAAAATCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: KCVMASDILSREMRASAAPAEPS*SRKSPN
Trigger: ATTTGGGGATTTTCTACTTCAAGAAGGCTCTGCAGG...TGCCGCAGAAGCCCTCATCTCCCTCGACAGGATATCTGATGCCATTACACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR GCA 90 bp GGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGGTTATAATACAGCATaGTGTTCTCAACATCGTCTA +
Preference number: 4 (lower is better)
Translates to: GRSASQGQAQCFSPVSSPGYNTA*CSQHRL
Trigger: TAGACGATGTTGAGAACAGCATGCTGTATTATAACC...TGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp TCAGAAGAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTACTTTGCTGCTGTTATTaGCAGTCTCGTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SEEQSVLLTAESSLQSQVLCCCY*QSRSSH
Trigger: ATGGGAAGAACGAGACTGGCAATAACAGCAGCAAAG...TACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTCTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp AAGTGTGTAATGGCATCAGATATCCTGTCGAGGGAGATGAGGGCTTCTGCGGCACTTTGCTGCTGTTATTaGCAGTCTCGTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KCVMASDILSREMRASAALCCCY*QSRSSH
Trigger: ATGGGAAGAACGAGACTGGCAATAACAGCAGCAAAG...TGCCGCAGAAGCCCTCATCTCCCTCGACAGGATATCTGATGCCATTACACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp AGACGGTGGAGCGGGAATGAACTTATCTCCATCATGGCTCTTACTGCTGCACGTTGGATCCATCTTTGCTaGTGTTATTGCCAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: RRWSGNELISIMALTAARWIHLC*CYCQSR
Trigger: ACGAGACTGGCAATAACAGCAGCAAAGATGGATCCA...ACGTGCAGCAGTAAGAGCCATGATGGAGATAAGTTCATTCCCGCTCCACCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp CAAGGCATTTCTGAGACAGATGGCTGCAAACTCCACACTGGCTACAGGAATGGCGGTTGGATCCATCTTTaGTGCTGTTATTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QGISETDGCKLHTGYRNGGWIHL*CCYCQS
Trigger: AGACTGGCAATAACAGCAGCAAAGATGGATCCAACC...GCCATTCCTGTAGCCAGTGTGGAGTTTGCAGCCATCTGTCTCAGAAATGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp TTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATGTACCACTTTATTGGCAGCAATaGAGCACTCAGCCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: LTAESSLQSQVSSAFHVPLYWQQ*STQPAV
Trigger: TACGGCTGGCTGAGTGCTGCATTGCTGCCAATAAAG...TGGTACATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp GAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACAGACCTTTAGTTTCTTaGTCAGAAGTCCCTTTATTG +
Preference number: 4 (lower is better)
Translates to: EVHHRDRPSVSLQSPLQHRPLVS*SEVPLL
Trigger: CAATAAAGGGACTTCTGAGCAAGAAACTAAAGGTCT...GTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp GAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACAAAAAGCACACCGCTTaGGCAAATTTTTCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: EVHHRDRPSVSLQSPLQHKKHTA*ANFSSK
Trigger: TTTCGAAGAAAAATTTGCCCAAGCGGTGTGCTTTTT...GTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp AAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTAGAGCTTTCTCAGCCTaGTGGGTTAATATATACAAG +
Preference number: 4 (lower is better)
Translates to: KCITGTGPVFLSSLLSSTRAFSA*WVNIYK
Trigger: CTTGTATATATTAACCCACCAGGCTGAGAAAGCTCT...AGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp TTCCCTCCAAGCTGGCTGCTGCTCTTGGAGCCATTTTCCTGCTTGGGATCTTGCAGAGCTTTCTCAGCCTaGTGGGTTAATATATACAAG +
Preference number: 4 (lower is better)
Translates to: FPPSWLLLLEPFSCLGSCRAFSA*WVNIYK
Trigger: CTTGTATATATTAACCCACCAGGCTGAGAAAGCTCT...GCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCTTGGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp AGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTAAGAGCTTTCTCAGCCTaGTGGGTTAATATATACAAG +
Preference number: 4 (lower is better)
Translates to: SASQGQAQCFSPVSSPALRAFSA*WVNIYK
Trigger: CTTGTATATATTAACCCACCAGGCTGAGAAAGCTCT...TAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp GAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTTTCAGGGACTTCATCTaGATGTACCCTCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: EQSVLLTAESSLQSQVSSFRDFI*MYPLTL
Trigger: CAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAA...AGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
3UTR CAA 72 bp TCAGCCTTAGGGTTGGATCCATCTTTGCTGCTGTTATaGCCAGTCTCGTTCTTCCCATTTTTGCCACCGCTA +
Preference number: 4 (lower is better)
Translates to: SALGLDPSLLLL*PVSFFPFLPPL
Trigger: TAGCGGTGGCAAAAATGGGAAGAACGAGACTGGCAATAACAGCAGCAAAGATGGATCCAACCCTAAGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
3UTR CAA 72 bp AGAGCTGCACTCTCAGCCTTAGGGTTGGATCCATCTTaGCTGCTGTTATTGCCAGTCTCGTTCTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: RAALSALGLDPS*LLLLPVSFFPF
Trigger: AAATGGGAAGAACGAGACTGGCAATAACAGCAGCAAAGATGGATCCAACCCTAAGGCTGAGAGTGCAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR TCA 90 bp GAGTACACTATAGCTGTCTTCAGAAACACCAGAAGGGGGCGTCAGATCTCATTAACAGCCGAGTGGACCTaGTTCTTCAGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: EYTIAVFRNTRRGRQISLTAEWT*FFSWLS
Trigger: ACTTAACCAGCTGAAGAATCAGGTCCACTCGGCTGT...TAATGAGATCTGACGCCCCCTTCTGGTGTTTCTGAAGACAGCTATAGTGTACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR TCA 90 bp TTGCTGGGATTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCTTGACCGCCCTGCAGAGCCTTCTTaGAGTAGAAAATCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LLGFELWTFRRAVSALDRPAEPS*SRKSPN
Trigger: ATTTGGGGATTTTCTACTTCAAGAAGGCTCTGCAGG...GCGGTCAAGAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp TTAGGGTTGGATCCATCTTTGCTGCTGTTATTGCCAGTCTCGTTCTTCCCATTTCCCTTCATGCTTCTCTaGTCCCTGATCTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LGLDPSLLLLLPVSFFPFPFMLL*SLICRL
Trigger: AAGCCTGCAGATCAGGGAGCAGAGAAGCATGAAGGG...AAATGGGAAGAACGAGACTGGCAATAACAGCAGCAAAGATGGATCCAACCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR GCA 90 bp GTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAGAGCCCTTCATGCTTCTCTaGTCCCTGATCTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VPSIFCFPCTKCRRGETEPFMLL*SLICRL
Trigger: AAGCCTGCAGATCAGGGAGCAGAGAAGCATGAAGGG...CTCTGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp GTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAGAGAGGACGGCAAGAAGATaGAGAGCTTTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPSIFCFPCTKCRRGETERTARR*RAFSAW
Trigger: CCAGGCTGAGAAAGCTCTGCATCTTCTTGCCGTCCT...CTCTGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp AGGATGGAGCACTTGAGGTTTTCTAACTCCTGTTTCCTCAGCGGAGAAGACGGTTGGATCCATCTTTGCTaGTGTTATTGCCAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: RMEHLRFSNSCFLSGEDGWIHLC*CYCQSR
Trigger: ACGAGACTGGCAATAACAGCAGCAAAGATGGATCCA...ACCGTCTTCTCCGCTGAGGAAACAGGAGTTAGAAAACCTCAAGTGCTCCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp GTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATGGTTGGATCCATCTTTaGTGCTGTTATTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VLLTAESSLQSQVSSAFHGWIHL*CCYCQS
Trigger: AGACTGGCAATAACAGCAGCAAAGATGGATCCAACC...ATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp GTGTGTAATGGCATCAGATATCCTGTCGAGGGAGATGAGGGCTTCTGCGGCATACCGCTTTTCGATAGTTaGCCCTTAAGTACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VCNGIRYPVEGDEGFCGIPLFDS*PLSTQS
Trigger: ACTTTGAGTACTTAAGGGGCAACTATCGAAAAGCGG...TATGCCGCAGAAGCCCTCATCTCCCTCGACAGGATATCTGATGCCATTACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp CAGCTTGGGCTGCTGCAGGAGCTGATCTGCATGGTTCAAAGCCATGAGGTTATCGCTTTCTCAGCCTGGTaGGTTAATATATACAAGTCT +
Preference number: 4 (lower is better)
Translates to: QLGLLQELICMVQSHEVIAFSAW*VNIYKS
Trigger: AGACTTGTATATATTAACCCACCAGGCTGAGAAAGC...GATAACCTCATGGCTTTGAACCATGCAGATCAGCTCCTGCAGCAGCCCAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp GCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGACAGATACACGCAGGACAATTGTGCTTGCTCATaGCAAAATGGATACAACCAA +
Preference number: 4 (lower is better)
Translates to: AEHLGQSTTPQADRYTQDNCACS*QNGYNQ
Trigger: TTGGTTGTATCCATTTTGCCATGAGCAAGCACAATT...GTCCTGCGTGTATCTGTCAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR CCA 90 bp TATGGCGACGTGAACAAGAATGGCTCTCATCGACTCATATTTGAATGCTTCATCGCTGGCTGCTGCTCTTaGAGCCATTTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YGDVNKNGSHRLIFECFIAGCCS*SHFPAW
Trigger: CCAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGC...GATGAAGCATTCAAATATGAGTCGATGAGAGCCATTCTTGTTCACGTCGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp AGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTATCTGCGGCATATAAATaGCCCAAAAATTTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SASQGQAQCFSPVSSPALSAAYK*PKNLRE
Trigger: CTCTCTTAAATTTTTGGGCCATTTATATGCCGCAGA...TAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp TATGGCGACGTGAACAAGAATGGCTCTCATCGACTCATATTTGAATGCTTCATCCACGGTGGTGAACGCTaGCATTTGGATGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: YGDVNKNGSHRLIFECFIHGGER*HLDGLD
Trigger: ATCCAGCCCATCCAAATGCCAGCGTTCACCACCGTG...GATGAAGCATTCAAATATGAGTCGATGAGAGCCATTCTTGTTCACGTCGCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR TCA 90 bp GAGCAGCTGGTTCCGCTTGATCATCTGCAAGGCCAGCTGTGTATTACCATTCTGGCAGATGATAGAGAATaGCAGCCTGGTTATAATACA +
Preference number: 4 (lower is better)
Translates to: EQLVPLDHLQGQLCITILADDRE*QPGYNT
Trigger: TGTATTATAACCAGGCTGTCATTCTCTATCATCTGC...CAGAATGGTAATACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp AGACGGTGGAGCGGGAATGAACTTATCTCCATCATGGCTCTTACTGCTGCACGTGCAGATGATAGAGAATaGCAGCCTGGTTATAATACA +
Preference number: 4 (lower is better)
Translates to: RRWSGNELISIMALTAARADDRE*QPGYNT
Trigger: TGTATTATAACCAGGCTGTCATTCTCTATCATCTGC...ACGTGCAGCAGTAAGAGCCATGATGGAGATAAGTTCATTCCCGCTCCACCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp ACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTTCTGGATGTACCCTCTaGCTTTGTACTGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: TAESSLQSQVSSAFHVPSSGCTL*LCTGVS
Trigger: AGATACACCAGTACAAAGTCAGAGGGTACATCCAGA...ACTTGGTACATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR TCA 90 bp TATGGCGACGTGAACAAGAATGGCTCTCATCGACTCATATTTGAATGCTTCATCACGGTGGAGCGGGAATaGACTTATCTCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: YGDVNKNGSHRLIFECFITVERE*TYLHHG
Trigger: GCCATGATGGAGATAAGTTCATTCCCGCTCCACCGT...GATGAAGCATTCAAATATGAGTCGATGAGAGCCATTCTTGTTCACGTCGCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp ACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTTGGATCCATCTTTGCTaGTGTTATTGCCAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: TAESSLQSQVSSAFHVPSWIHLC*CYCQSR
Trigger: ACGAGACTGGCAATAACAGCAGCAAAGATGGATCCA...ACTTGGTACATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp AGGATGGAGCACTTGAGGTTTTCTAACTCCTGTTTCCTCAGCGGAGAAGACGGTAAGAAACAGGGAAGGTaGAGAATTTCCAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RMEHLRFSNSCFLSGEDGKKQGR*RISSCV
Trigger: AACACAGCTGGAAATTCTGCACCTTCCCTGTTTCTT...ACCGTCTTCTCCGCTGAGGAAACAGGAGTTAGAAAACCTCAAGTGCTCCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp AGGATGGAGCACTTGAGGTTTTCTAACTCCTGTTTCCTCAGCGGAGAAGACGGTGGTTATTCCAGAACATaGATCTCAAGCATTCACCTG +
Preference number: 4 (lower is better)
Translates to: RMEHLRFSNSCFLSGEDGGYSRT*ISSIHL
Trigger: CAGGTGAATGCTTGAGATGCATGTTCTGGAATAACC...ACCGTCTTCTCCGCTGAGGAAACAGGAGTTAGAAAACCTCAAGTGCTCCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR GCA 90 bp GTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATGGTTATTCCAGAACATaGATCTCAAGCATTCACCTG +
Preference number: 4 (lower is better)
Translates to: VLLTAESSLQSQVSSAFHGYSRT*ISSIHL
Trigger: CAGGTGAATGCTTGAGATGCATGTTCTGGAATAACC...ATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CCA 90 bp GAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTTCTTTGTTTATATCTTaGAGACAGGCAAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: EQSVLLTAESSLQSQVSSSLFIS*RQARCC
Trigger: GCAACACCTTGCCTGTCTCCAAGATATAAACAAAGA...AGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CCA 90 bp GAGCAGCTGGTTCCGCTTGATCATCTGCAAGGCCAGCTGTGTATTACCATTCTGGCTTTCTCAGCCTGGTaGGTTAATATATACAAGTCT +
Preference number: 4 (lower is better)
Translates to: EQLVPLDHLQGQLCITILAFSAW*VNIYKS
Trigger: AGACTTGTATATATTAACCCACCAGGCTGAGAAAGC...CAGAATGGTAATACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp CAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTAGAGCTTTCTCAGCCTaGTGGGTTAATATATACAAG +
Preference number: 4 (lower is better)
Translates to: QSVLLTAESSLQSQVSSARAFSA*WVNIYK
Trigger: CTTGTATATATTAACCCACCAGGCTGAGAAAGCTCT...AGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CCA 90 bp CTGCTGCTCTTGGAGCCATTTTCCTGCTTGGGATCTTGCTGTTCTTCAGGTAACTGTACTGGTGTATCTTaGACTTGGCAGCCTCTATTA +
Preference number: 4 (lower is better)
Translates to: LLLLEPFSCLGSCCSSGNCTGVS*TWQPLL
Trigger: TAATAGAGGCTGCCAAGTCCAAGATACACCAGTACA...GTTACCTGAAGAACAGCAAGATCCCAAGCAGGAAAATGGCTCCAAGAGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp TCAGAAGAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTAGCTCATATCTTTTGTTaGTCAGCAATGTACACATGG +
Preference number: 4 (lower is better)
Translates to: SEEQSVLLTAESSLQSQVAHIFC*SAMYTW
Trigger: CCATGTGTACATTGCTGACCAACAAAAGATATGAGC...TACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTCTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
3UTR CAA 72 bp ATACACGCAGGACACAGAGATGCAGGGTCTAAGTCTTaGGGATGCAGGCCAGGCTACTTAAGGATTTACAAA +
Preference number: 4 (lower is better)
Translates to: IHAGHRDAGSKS*GCRPGYLRIYK
Trigger: TTTGTAAATCCTTAAGTAGCCTGGCCTGCATCCCAAAGACTTAGACCCTGCATCTCTGTGTCCTGCGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR TCA 90 bp TTGCTGGGATTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCTTGACCGCGCAGATGATAGAGAATaGCAGCCTGGTTATAATACA +
Preference number: 4 (lower is better)
Translates to: LLGFELWTFRRAVSALDRADDRE*QPGYNT
Trigger: TGTATTATAACCAGGCTGTCATTCTCTATCATCTGC...GCGGTCAAGAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp CCATGTGATTGCTGGGATTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCTTCATGAAGCCTGGATaGTCGGCAATGTTTGAACTA +
Preference number: 4 (lower is better)
Translates to: PCDCWDLNSGLSEEQSVLFMKPG*SAMFEL
Trigger: TAGTTCAAACATTGCCGAGCATCCAGGCTTCATGAA...GAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAATCACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp CCAGTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACATTCCAGAAAACTTTTTaGCTGGATCAGTGCCACCCG +
Preference number: 4 (lower is better)
Translates to: PVPSIFCFPCTKCRRGETFQKTF*LDQCHP
Trigger: CGGGTGGCACTGATCCAGGCAAAAAGTTTTCTGGAA...TGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CCA 90 bp TTTGCTGCTGTTATTGCCAGTCTCGTTCTTCCCATTTTTGCCACCGCTACCCTGTCTTTGTTTATATCTTaGAGACAGGCAAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: FAAVIASLVLPIFATATLSLFIS*RQARCC
Trigger: GCAACACCTTGCCTGTCTCCAAGATATAAACAAAGA...CAGGGTAGCGGTGGCAAAAATGGGAAGAACGAGACTGGCAATAACAGCAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR CCA 90 bp GGAAGAATCCTGACATCTCAGCCTCTGAGTGAGAACTTAGGCCATGAGACAGGCAAAAAGCACACCGCTTaGGCAAATTTTTCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: GRILTSQPLSENLGHETGKKHTA*ANFSSK
Trigger: TTTCGAAGAAAAATTTGCCCAAGCGGTGTGCTTTTT...GCCTGTCTCATGGCCTAAGTTCTCACTCAGAGGCTGAGATGTCAGGATTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp CCAGTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAGGTGTATCTTGGACTTaGCAGCCTCTATTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PVPSIFCFPCTKCRRGETGVSWT*QPLLEL
Trigger: CAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACC...TGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CCA 90 bp GTGTGTAATGGCATCAGATATCCTGTCGAGGGAGATGAGGGCTTCTGCGGCATATTGCTCATGGCAAAATaGATACAACCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: VCNGIRYPVEGDEGFCGILLMAK*IQPRLF
Trigger: GAATAACCTTGGTTGTATCCATTTTGCCATGAGCAA...TATGCCGCAGAAGCCCTCATCTCCCTCGACAGGATATCTGATGCCATTACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR CCA 90 bp TCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAGAGACACTCACCCCTTTATTaGCAGCAATGCAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: SQVSSAFHVPSVEEEKQRHSPLY*QQCSTQ
Trigger: CTGAGTGCTGCATTGCTGCCAATAAAGGGGTGAGTG...TCTCTGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
3UTR CAA 72 bp TACGAATGGTTTCAGACACCATGTGATTGCTGGGATTaGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: YEWFQTPCDCWD*NSGLSEEQSVL
Trigger: GAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAATCACATGGTGTCTGAAACCATTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR TCA 90 bp TTGGCAGCCTCTATTAGAGCTGCACTCTCAGCCTTAGGGTTGGATCCATCTTTGGGCAAATTTTTCTTCTaGTTCTTCAGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: LAASIRAALSALGLDPSLGKFFF*FFSWLS
Trigger: ACTTAACCAGCTGAAGAATCAGAAGAAAAATTTGCC...CAAAGATGGATCCAACCCTAAGGCTGAGAGTGCAGCTCTAATAGAGGCTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR GCA 90 bp TGTGATTGCTGGGATTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCTTGAAGAAACAGGGAAGGTaGAGAATTTCCAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CDCWDLNSGLSEEQSVLLKKQGR*RISSCV
Trigger: AACACAGCTGGAAATTCTGCACCTTCCCTGTTTCTT...CAAGAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp GAGTACACTATAGCTGTCTTCAGAAACACCAGAAGGGGGCGTCAGATCTCATTACCGCTTTTCGATAGTTaGCCCTTAAGTACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: EYTIAVFRNTRRGRQISLPLFDS*PLSTQS
Trigger: ACTTTGAGTACTTAAGGGGCAACTATCGAAAAGCGG...TAATGAGATCTGACGCCCCCTTCTGGTGTTTCTGAAGACAGCTATAGTGTACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp TATGGCGACGTGAACAAGAATGGCTCTCATCGACTCATATTTGAATGCTTCATCTTCCAGAAAACTTTTTaGCTGGATCAGTGCCACCCG +
Preference number: 4 (lower is better)
Translates to: YGDVNKNGSHRLIFECFIFQKTF*LDQCHP
Trigger: CGGGTGGCACTGATCCAGGCAAAAAGTTTTCTGGAA...GATGAAGCATTCAAATATGAGTCGATGAGAGCCATTCTTGTTCACGTCGCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp CAACAAAAACCAAAGCAAAAATTCTTTATAACAGTCTTGAGTGCTGGGTCCAACGTGACCCCAGATGATTaGCCTGCCCCTTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: QQKPKQKFFITVLSAGSNVTPDD*PAPSCF
Trigger: GAAGCATGAAGGGGCAGGCCAATCATCTGGGGTCAC...GTTGGACCCAGCACTCAAGACTGTTATAAAGAATTTTTGCTTTGGTTTTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp CCATGTGATTGCTGGGATTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCGCTTTCTCAGCCTGGTaGGTTAATATATACAAGTCT +
Preference number: 4 (lower is better)
Translates to: PCDCWDLNSGLSEEQSVLAFSAW*VNIYKS
Trigger: AGACTTGTATATATTAACCCACCAGGCTGAGAAAGC...GAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAATCACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CCA 90 bp TGTGATTGCTGGGATTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCTTGTGTACTGGTGTATCTTaGACTTGGCAGCCTCTATTA +
Preference number: 4 (lower is better)
Translates to: CDCWDLNSGLSEEQSVLLCTGVS*TWQPLL
Trigger: TAATAGAGGCTGCCAAGTCCAAGATACACCAGTACA...CAAGAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR TCA 90 bp TATGGCGACGTGAACAAGAATGGCTCTCATCGACTCATATTTGAATGCTTCATCATTTTCACCCTTGTCTaGTCCTTGGTCCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: YGDVNKNGSHRLIFECFIIFTLV*SLVLLI
Trigger: AATGAGCAGGACCAAGGATCAGACAAGGGTGAAAAT...GATGAAGCATTCAAATATGAGTCGATGAGAGCCATTCTTGTTCACGTCGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR GCA 90 bp GTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAGAGTCCCCAAATTGTGCTTaGTCATGGCAAAATGGATAC +
Preference number: 4 (lower is better)
Translates to: VPSIFCFPCTKCRRGETESPNCA*SWQNGY
Trigger: GTATCCATTTTGCCATGAGCAAGCACAATTTGGGGA...CTCTGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CCA 90 bp CAAATATCTGCAATCCTAGCACTCAAAAGGTCCAGCCAGGTCAGAGGATGGCATAAAAAGCACACCGCTTaGGCAAATTTTTCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: QISAILALKRSSQVRGWHKKHTA*ANFSSK
Trigger: TTTCGAAGAAAAATTTGCCCAAGCGGTGTGCTTTTT...ATGCCATCCTCTGACCTGGCTGGACCTTTTGAGTGCTAGGATTGCAGATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp TATGGCGACGTGAACAAGAATGGCTCTCATCGACTCATATTTGAATGCTTCATCTTCAGGGACTTCATCTaGATGTACCCTCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: YGDVNKNGSHRLIFECFIFRDFI*MYPLTL
Trigger: CAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAA...GATGAAGCATTCAAATATGAGTCGATGAGAGCCATTCTTGTTCACGTCGCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CCA 90 bp AGGGAGATGAGGGCTTCTGCGGCATATAAATGGCCCAAAAATTTAAGAGAGCCAGCTCATATCTTTTGTTaGTCAGCAATGTACACATGG +
Preference number: 4 (lower is better)
Translates to: REMRASAAYKWPKNLREPAHIFC*SAMYTW
Trigger: CCATGTGTACATTGCTGACCAACAAAAGATATGAGC...TGGCTCTCTTAAATTTTTGGGCCATTTATATGCCGCAGAAGCCCTCATCTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR GCA 90 bp CCTTGTCTGATCCTACAAATACATGAAAATAGATCTGAGGCAGGACAACAGCACTCCCCAAATTGTGCTTaGTCATGGCAAAATGGATAC +
Preference number: 4 (lower is better)
Translates to: PCLILQIHENRSEAGQQHSPNCA*SWQNGY
Trigger: GTATCCATTTTGCCATGAGCAAGCACAATTTGGGGA...GTGCTGTTGTCCTGCCTCAGATCTATTTTCATGTATTTGTAGGATCAGACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR CCA 90 bp GAGTACACTATAGCTGTCTTCAGAAACACCAGAAGGGGGCGTCAGATCTCATTAAATTGTGCTTGCTCATaGCAAAATGGATACAACCAA +
Preference number: 4 (lower is better)
Translates to: EYTIAVFRNTRRGRQISLNCACS*QNGYNQ
Trigger: TTGGTTGTATCCATTTTGCCATGAGCAAGCACAATT...TAATGAGATCTGACGCCCCCTTCTGGTGTTTCTGAAGACAGCTATAGTGTACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp CAACAAAAACCAAAGCAAAAATTCTTTATAACAGTCTTGAGTGCTGGGTCCAACTCCTGCTTGGGATCTTaGTGTTCTTCAGGTAACAGC +
Preference number: 4 (lower is better)
Translates to: QQKPKQKFFITVLSAGSNSCLGS*CSSGNS
Trigger: GCTGTTACCTGAAGAACAGCAAGATCCCAAGCAGGA...GTTGGACCCAGCACTCAAGACTGTTATAAAGAATTTTTGCTTTGGTTTTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CCA 90 bp CCAGTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAAAAAAGCACACCGCTTaGGCAAATTTTTCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: PVPSIFCFPCTKCRRGETKKHTA*ANFSSK
Trigger: TTTCGAAGAAAAATTTGCCCAAGCGGTGTGCTTTTT...TGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGACTGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CCA 90 bp GTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAGAGTTGCTCATGGCAAAATaGATACAACCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: VPSIFCFPCTKCRRGETELLMAK*IQPRLF
Trigger: GAATAACCTTGGTTGTATCCATTTTGCCATGAGCAA...CTCTGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR GCA 90 bp CAACAAAAACCAAAGCAAAAATTCTTTATAACAGTCTTGAGTGCTGGGTCCAACGGTTGGATCCATCTTTaGTGCTGTTATTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QQKPKQKFFITVLSAGSNGWIHL*CCYCQS
Trigger: AGACTGGCAATAACAGCAGCAAAGATGGATCCAACC...GTTGGACCCAGCACTCAAGACTGTTATAAAGAATTTTTGCTTTGGTTTTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR GCA 90 bp TTTGAAAACCATGTCTCCATTCCCTCTTGCACAGTGGAATCAGTTCATAGAAAATTCATGAAGCCTGGATaGTCGGCAATGTTTGAACTA +
Preference number: 4 (lower is better)
Translates to: FENHVSIPSCTVESVHRKFMKPG*SAMFEL
Trigger: TAGTTCAAACATTGCCGAGCATCCAGGCTTCATGAA...TTTTCTATGAACTGATTCCACTGTGCAAGAGGGAATGGAGACATGGTTTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
3UTR CAA 72 bp CAACAAAAACCAAAGCAAAAATTCTTTATAACAGTCTaGAGTGCTGGGTCCAACCTCCATAACTATGGCGAC +
Preference number: 4 (lower is better)
Translates to: QQKPKQKFFITV*SAGSNLHNYGD
Trigger: GTCGCCATAGTTATGGAGGTTGGACCCAGCACTCAAGACTGTTATAAAGAATTTTTGCTTTGGTTTTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS TCA 90 bp GAGGGCACTGGCGGACAGCTCCTTCTCCTGGTCCGTGACCCCAGATaGTTGGCCTGCCCCTTCATGCTTCTCTGCTCCCTGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EGTGGQLLLLVRDPR*LACPFMLLCSLICR
Trigger: CCTGCAGATCAGGGAGCAGAGAAGCATGAAGGGGCAGGCCAATCATCTGGGGTCACGGACCAGGAGAAGGAGCTGTCCGCCAGTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000070117.8
ENSMUST00000213955.2
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS TCA 90 bp GAGGGCACTGGCGGACAGCTCCTTCTCCTGGTCCGTGACCCCAGATaGTTGGCCTGCCCCTTCATGCTTCTCTGCTCCCTGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: EGTGGQLLLLVRDPR*LACPFMLLCSLIRQ
Trigger: CTGTCTGATCAGGGAGCAGAGAAGCATGAAGGGGCAGGCCAATCATCTGGGGTCACGGACCAGGAGAAGGAGCTGTCCGCCAGTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238809.2
CDS TCA 90 bp CACTCAGCCAGCCGTAGCCAGAGACGAGGATTCGCGTGGTACACCTaGACAGCTTCAATCAGACACTCGAAGGCAGCGAGAGGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: HSASRSQRRGFAWYT*TASIRHSKAARGLP
Trigger: CGGGAGGCCTCTCGCTGCCTTCGAGTGTCTGATTGAAGCTGTTCAGGTGTACCACGCGAATCCTCGTCTCTGGCTACGGCTGGCTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
CDS GCA 90 bp CTTCTCTGCTCCCTGATCAGACAGTGTTCGCACATAATCCCACAGTaGATCTCCATTGGCGATGGGGAGCGGGTCCGACCGCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLCSLIRQCSHIIPQ*ISIGDGERVRPPLQ
Trigger: CTGGAGGGGCGGTCGGACCCGCTCCCCATCGCCAATGGAGATGCACTGTGGGATTATGTGCGAACACTGTCTGATCAGGGAGCAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238809.2
CDS TCA 90 bp GGAGACAGGCAAGGTGTTGCAGACAGGCATCATAATTTCCAGACGTaGAGGCCTGGAGGGCACTGGCGGACAGCTCCTTCTCCTGGTCCG +
Preference number: 5 (lower is better)
Translates to: GDRQGVADRHHNFQT*RPGGHWRTAPSPGP
Trigger: CGGACCAGGAGAAGGAGCTGTCCGCCAGTGCCCTCCAGGCCTTCACGTCTGGAAATTATGATGCCTGTCTGCAACACCTTGCCTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070117.8
ENSMUST00000213955.2
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
ENSMUST00000238809.2
CDS-3UTR CAA 90 bp GCTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGCTGGCTGCTGCTCTaGGAGCCATTTTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: ASSSGSDTSGTGRRGLAGSWLLL*EPFSCL
Trigger: CAAGCAGGAAAATGGCTCCAAGAGCAGCAGCCAGCT...GCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CAA 90 bp TGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCGGTGAACGCTGGCATTaGGATGGGCTGGATGGGGTG +
Preference number: 5 (lower is better)
Translates to: CWQKCITGTGPVFLSSLLGERWH*DGLDGV
Trigger: CACCCCATCCAGCCCATCCAAATGCCAGCGTTCACC...GAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CAA 90 bp GACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGAGGGTTGGATCCATCTTaGCTGCTGTTATTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: DTSGTGRRGLAGRSASQGGLDPS*LLLLPV
Trigger: GACTGGCAATAACAGCAGCAAAGATGGATCCAACCC...TCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTGGGTTGGATCCATCTTaGCTGCTGTTATTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: GGVALLAEVHHRDRPSVSGLDPS*LLLLPV
Trigger: GACTGGCAATAACAGCAGCAAAGATGGATCCAACCC...AGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp AGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTAAGCTGGGCGCAGACGTaGTCATTTTCCTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SASQGQAQCFSPVSSPALSWAQT*SFSCRA
Trigger: GGCTCTGCAGGAAAATGACAACGTCTGCGCCCAGCT...TAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CAA 90 bp ATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTACTTCCAGACACTTTCGGGCCTaGTCGTACTCGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: ITGTGPVFLSSLLSSTTSRHFRA*SYSLLR
Trigger: CCTGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCT...GGAAGTAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CAA 90 bp CAGCTTGGGCTGCTGCAGGAGCTGATCTGCATGGTTCAAAGCCATGAGGTTATCAGCTGGGCGCAGACGTaGTCATTTTCCTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: QLGLLQELICMVQSHEVISWAQT*SFSCRA
Trigger: GGCTCTGCAGGAAAATGACAACGTCTGCGCCCAGCT...GATAACCTCATGGCTTTGAACCATGCAGATCAGCTCCTGCAGCAGCCCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR CAA 90 bp CAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATATGTACCCTCTGACTTaGTACTGGTGTATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: QGVTLQGLGGVALLAEVHMYPLT*YWCILD
Trigger: GTCCAAGATACACCAGTACAAAGTCAGAGGGTACAT...ATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GCAGAGGACAGAGAGCACCGCTCCACGCTGAGCACTTGGGACAAAGCACTACTCGACTTGATTTCCCTTTaGCAAGCCTTCAGGGACTTC +
Preference number: 5 (lower is better)
Translates to: AEDREHRSTLSTWDKALLDLISL*QAFRDF
Trigger: GAAGTCCCTGAAGGCTTGCAAAAGGGAAATCAAGTC...GAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCTGTCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGAGTGTTCATGACAGACTaGATTTCCCTTTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: DTSGTGRRGLAGRSASQGVFMTD*ISLLQA
Trigger: GGCTTGCAAAAGGGAAATCAAGTCTGTCATGAACAC...TCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCAGAAGTCCCTTTATaGGCAGCAATGCAGCACTCA +
Preference number: 5 (lower is better)
Translates to: VALLAEVHHRDRPSVSLQSEVPL*AAMQHS
Trigger: TGAGTGCTGCATTGCTGCCAATAAAGGGACTTCTGA...CTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CAA 90 bp GATCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTGAGACAGGCAAGGTGTaGCAGACAGGCATCATAATT +
Preference number: 5 (lower is better)
Translates to: DHRCRLMQTLSGLVVLAPETGKV*QTGIII
Trigger: AATTATGATGCCTGTCTGCAACACCTTGCCTGTCTC...AGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GCTGAGCACTTGGGACAAAGCACTACTCCTCAGGCTGACAGATACACGCAGGACGGGTTGGATCCATCTTaGCTGCTGTTATTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: AEHLGQSTTPQADRYTQDGLDPS*LLLLPV
Trigger: GACTGGCAATAACAGCAGCAAAGATGGATCCAACCC...GTCCTGCGTGTATCTGTCAGCCTGAGGAGTAGTGCTTTGTCCCAAGTGCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCATGGTGTATCTTGGACTaGGCAGCCTCTATTAGAGCT +
Preference number: 5 (lower is better)
Translates to: GRSASQGQAQCFSPVSSPWCILD*AASIRA
Trigger: AGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCA...TGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp ATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCAGGCAGTATGTACCCTCTGACTTaGTACTGGTGTATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: MPPDADTFGPCRTRSSGSMYPLT*YWCILD
Trigger: GTCCAAGATACACCAGTACAAAGTCAGAGGGTACAT...ACTGCCTGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GATCATCGATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTGACTTGATTTCCCTTTaGCAAGCCTTCAGGGACTTC +
Preference number: 5 (lower is better)
Translates to: DHRCRLMQTLSGLVVLAPDLISL*QAFRDF
Trigger: GAAGTCCCTGAAGGCTTGCAAAAGGGAAATCAAGTC...AGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCATCGATGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GGAGGCGTGGCCTTGCTGGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTGATGCTCGGCAATGTTaGAACTATTCAACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GGVALLAEVHHRDRPSVSDARQC*NYSTAS
Trigger: TGAAGCTGTTGAATAGTTCAAACATTGCCGAGCATC...AGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCCAGCAAGGCCACGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATAGCTGGGCGCAGACGTaGTCATTTTCCTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: VLLTAESSLQSQVSSAFHSWAQT*SFSCRA
Trigger: GGCTCTGCAGGAAAATGACAACGTCTGCGCCCAGCT...ATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp GCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGGAGCCATTTTCCTGCTaGGGATCTTGCTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: AEVHHRDRPSVSLQSPLQEPFSC*GSCCSS
Trigger: TGAAGAACAGCAAGATCCCAAGCAGGAAAATGGCTC...CTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CAA 90 bp CAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCCTTGGTCCTGCTCATTaGAAGAGATCCCTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: QKCITGTGPVFLSSLLSSLGPAH*KRSLRR
Trigger: TCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAG...GCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CAA 90 bp AGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTAGAGACAGGCAAGGTGTaGCAGACAGGCATCATAATT +
Preference number: 5 (lower is better)
Translates to: SASQGQAQCFSPVSSPALETGKV*QTGIII
Trigger: AATTATGATGCCTGTCTGCAACACCTTGCCTGTCTC...TAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp ATGCCGCCTGATGCAGACACTTTCGGGCCTTGTCGTACTCGCTCCTCAGGCAGTCAAAAAGCACACCGCTaGGGCAAATTTTTCTTCGAA +
Preference number: 5 (lower is better)
Translates to: MPPDADTFGPCRTRSSGSQKAHR*GKFFFE
Trigger: TTCGAAGAAAAATTTGCCCAAGCGGTGTGCTTTTTG...ACTGCCTGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGGCGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp AAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTGACTTGATTTCCCTTTaGCAAGCCTTCAGGGACTTC +
Preference number: 5 (lower is better)
Translates to: KCITGTGPVFLSSLLSSTDLISL*QAFRDF
Trigger: GAAGTCCCTGAAGGCTTGCAAAAGGGAAATCAAGTC...AGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACGTGTTCATGACAGACTaGATTTCCCTTTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: EVHHRDRPSVSLQSPLQHVFMTD*ISLLQA
Trigger: GGCTTGCAAAAGGGAAATCAAGTCTGTCATGAACAC...GTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GCAGAGGACAGAGAGCACCGCTCCACGCTGAGCACTTGGGACAAAGCACTACTCAGCAGCTCATATCTTTaGTTGGTCAGCAATGTACAC +
Preference number: 5 (lower is better)
Translates to: AEDREHRSTLSTWDKALLSSSYL*LVSNVH
Trigger: GTGTACATTGCTGACCAACAAAAGATATGAGCTGCT...GAGTAGTGCTTTGTCCCAAGTGCTCAGCGTGGAGCGGTGCTCTCTGTCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215155.2
CDS-3UTR CAA 90 bp GCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCAAAAAGCACACCGCTaGGGCAAATTTTTCTTCGAA +
Preference number: 5 (lower is better)
Translates to: AEVHHRDRPSVSLQSPLQQKAHR*GKFFFE
Trigger: TTCGAAGAAAAATTTGCCCAAGCGGTGTGCTTTTTG...CTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGGGTTGGATCCATCTTaGCTGCTGTTATTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: EQSVLLTAESSLQSQVSSGLDPS*LLLLPV
Trigger: GACTGGCAATAACAGCAGCAAAGATGGATCCAACCC...AGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp GGCAGAAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAAGACAGTGTTCTGAATaGACTGTGATGCCAGAACTA +
Preference number: 5 (lower is better)
Translates to: GRSASQGQAQCFSPVSSPRQCSE*TVMPEL
Trigger: TAGTTCTGGCATCACAGTCAATTCAGAACACTGTCT...TGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CAA 90 bp TCTCTCCAGTCTCCTCTCCAGCACTACTTCCGTCTTCCTGCCACAATGTTCCCCCAAAAAGCACACCGCTaGGGCAAATTTTTCTTCGAA +
Preference number: 5 (lower is better)
Translates to: SLQSPLQHYFRLPATMFPQKAHR*GKFFFE
Trigger: TTCGAAGAAAAATTTGCCCAAGCGGTGTGCTTTTTG...GGGGAACATTGTGGCAGGAAGACGGAAGTAGTGCTGGAGAGGAGACTGGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp AGACGGTGGAGCGGGAATGAACTTATCTCCATCATGGCTCTTACTGCTGCACGTTGGTGTATCTTGGACTaGGCAGCCTCTATTAGAGCT +
Preference number: 5 (lower is better)
Translates to: RRWSGNELISIMALTAARWCILD*AASIRA
Trigger: AGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCA...ACGTGCAGCAGTAAGAGCCATGATGGAGATAAGTTCATTCCCGCTCCACCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGACTTGATTTCCCTTTaGCAAGCCTTCAGGGACTTC +
Preference number: 5 (lower is better)
Translates to: EQSVLLTAESSLQSQVSSDLISL*QAFRDF
Trigger: GAAGTCCCTGAAGGCTTGCAAAAGGGAAATCAAGTC...AGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp AAGTGCATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTGATGCTCGGCAATGTTaGAACTATTCAACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: KCITGTGPVFLSSLLSSTDARQC*NYSTAS
Trigger: TGAAGCTGTTGAATAGTTCAAACATTGCCGAGCATC...AGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGATGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp AATGCTTCATCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTAGCAGCTCATATCTTTaGTTGGTCAGCAATGTACAC +
Preference number: 5 (lower is better)
Translates to: NASSSGSDTSGTGRRGLASSSYL*LVSNVH
Trigger: GTGTACATTGCTGACCAACAAAAGATATGAGCTGCT...AGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGATGAAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS-3UTR CAA 90 bp TCTTCAGGGAGTGACACTTCAGGGACTGGGAGGCGTGGCCTTGCTGGCAGAAGTAAGACCTTTAGTTTCTaGCTCAGAAGTCCCTTTATT +
Preference number: 5 (lower is better)
Translates to: SSGSDTSGTGRRGLAGRSKTFSF*LRSPFI
Trigger: AATAAAGGGACTTCTGAGCAAGAAACTAAAGGTCTT...ACTTCTGCCAGCAAGGCCACGCCTCCCAGTCCCTGAAGTGTCACTCCCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070117.8
CDS CCA 90 bp CAAGCCTTCAGGGACTTCATCTGGATGTACCCTCTGACTTTGTACTaGTGTATCTTGGACTTGGCAGCCTCTATTAGAGCTGCACTCTCA +
Preference number: 5 (lower is better)
Translates to: QAFRDFIWMYPLTLY*CILDLAASIRAALS
Trigger: TGAGAGTGCAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGTACAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAAGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp ATCTTGGACTTGGCAGCCTCTATTAGAGCTGCACTCTCAGCCTTAGGGTTGGATGAGACAGGCAAGGTGTaGCAGACAGGCATCATAATT +
Preference number: 5 (lower is better)
Translates to: ILDLAASIRAALSALGLDETGKV*QTGIII
Trigger: AATTATGATGCCTGTCTGCAACACCTTGCCTGTCTC...ATCCAACCCTAAGGCTGAGAGTGCAGCTCTAATAGAGGCTGCCAAGTCCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR CAA 90 bp AGGGAATGGAAGGGAAGAATCCTGACATCTCAGCCTCTGAGTGAGAACTTAGGCGAGACAGGCAAGGTGTaGCAGACAGGCATCATAATT +
Preference number: 5 (lower is better)
Translates to: REWKGRILTSQPLSENLGETGKV*QTGIII
Trigger: AATTATGATGCCTGTCTGCAACACCTTGCCTGTCTC...GCCTAAGTTCTCACTCAGAGGCTGAGATGTCAGGATTCTTCCCTTCCATTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp ACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTACTTCCGTCTTCCTGATCTTTGTTTATATCTaGGAGACAGGCAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: TGPVFLSSLLSSTTSVFLIFVYI*ETGKVL
Trigger: CAACACCTTGCCTGTCTCCAAGATATAAACAAAGAT...CAGGAAGACGGAAGTAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp AGTAAGACCAGCTGTAAGCGCGGAGAGCCAGCTTCACTTCCTTCCCTTCACAGCATCTTTGTTTATATCTaGGAGACAGGCAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SKTSCKRGEPASLPSLHSIFVYI*ETGKVL
Trigger: CAACACCTTGCCTGTCTCCAAGATATAAACAAAGAT...GCTGTGAAGGGAAGGAAGTGAAGCTGGCTCTCCGCGCTTACAGCTGGTCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp ATCACAGGGACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTACTTCCATCTTTGTTTATATCTaGGAGACAGGCAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: ITGTGPVFLSSLLSSTTSIFVYI*ETGKVL
Trigger: CAACACCTTGCCTGTCTCCAAGATATAAACAAAGAT...GGAAGTAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGTCCCTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GGAAGAATCCTGACATCTCAGCCTCTGAGTGAGAACTTAGGCCATGAGACAGGCATGTACCCTCTGACTTaGTACTGGTGTATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: GRILTSQPLSENLGHETGMYPLT*YWCILD
Trigger: GTCCAAGATACACCAGTACAAAGTCAGAGGGTACAT...GCCTGTCTCATGGCCTAAGTTCTCACTCAGAGGCTGAGATGTCAGGATTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp TCAGAAGAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTAATGTACCCTCTGACTTaGTACTGGTGTATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: SEEQSVLLTAESSLQSQVMYPLT*YWCILD
Trigger: GTCCAAGATACACCAGTACAAAGTCAGAGGGTACAT...TACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTCTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp TTGACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATGTACCAGAGACAGGCAAGGTGTaGCAGACAGGCATCATAATT +
Preference number: 5 (lower is better)
Translates to: LTAESSLQSQVSSAFHVPETGKV*QTGIII
Trigger: AATTATGATGCCTGTCTGCAACACCTTGCCTGTCTC...TGGTACATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp ACAGGCCCAGTGTTTCTCTCCAGTCTCCTCTCCAGCACTACTTCCGTCTTCCTGCAGCTGGTTAAGTGTTaGTCTCAAATTATCTGTTGT +
Preference number: 5 (lower is better)
Translates to: TGPVFLSSLLSSTTSVFLQLVKC*SQIICC
Trigger: ACAACAGATAATTTGAGACAAACACTTAACCAGCTG...CAGGAAGACGGAAGTAGTGCTGGAGAGGAGACTGGAGAGAAACACTGGGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070117.8
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp TTTACTGCGGGGAGCAGCTGGTTCCGCTTGATCATCTGCAAGGCCAGCTGTGTACAGCTGGTTAAGTGTTaGTCTCAAATTATCTGTTGT +
Preference number: 5 (lower is better)
Translates to: FTAGSSWFRLIICKASCVQLVKC*SQIICC
Trigger: ACAACAGATAATTTGAGACAAACACTTAACCAGCTG...TACACAGCTGGCCTTGCAGATGATCAAGCGGAACCAGCTGCTCCCCGCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp ACCGCTGAGTCATCTCTCCAGTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTTGGTGTATCTTGGACTaGGCAGCCTCTATTAGAGCT +
Preference number: 5 (lower is better)
Translates to: TAESSLQSQVSSAFHVPSWCILD*AASIRA
Trigger: AGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCA...ACTTGGTACATGGAAAGCAGAAGATACTTGGGACTGGAGAGATGACTCAGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS TCA 90 bp GCAAAAAGCACACCGCTTGGGCAAATTTTTCTTCGAAAGGTTCTATaGACTGATAGAGCTTCTCGCCGACAGATATGGCCTCCGTGTACT +
Preference number: 5 (lower is better)
Translates to: AKSTPLGQIFLRKVL*TDRASRRQIWPPCT
Trigger: AGTACACGGAGGCCATATCTGTCGGCGAGAAGCTCTATCAGTTCATAGAACCTTTCGAAGAAAAATTTGCCCAAGCGGTGTGCTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp CAAATATCTGCAATCCTAGCACTCAAAAGGTCCAGCCAGGTCAGAGGATGGCATGTGTTCATGACAGACTaGATTTCCCTTTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: QISAILALKRSSQVRGWHVFMTD*ISLLQA
Trigger: GGCTTGCAAAAGGGAAATCAAGTCTGTCATGAACAC...ATGCCATCCTCTGACCTGGCTGGACCTTTTGAGTGCTAGGATTGCAGATATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS CCA 90 bp ATGACAGACTTGATTTCCCTTTTGCAAGCCTTCAGGGACTTCATCTaGATGTACCCTCTGACTTTGTACTGGTGTATCTTGGACTTGGCA +
Preference number: 5 (lower is better)
Translates to: MTDLISLLQAFRDFI*MYPLTLYWCILDLA
Trigger: TGCCAAGTCCAAGATACACCAGTACAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAAGGCTTGCAAAAGGGAAATCAAGTCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp TTTGCTGCTGTTATTGCCAGTCTCGTTCTTCCCATTTTTGCCACCGCTACCCTGATCTTTGTTTATATCTaGGAGACAGGCAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: FAAVIASLVLPIFATATLIFVYI*ETGKVL
Trigger: CAACACCTTGCCTGTCTCCAAGATATAAACAAAGAT...CAGGGTAGCGGTGGCAAAAATGGGAAGAACGAGACTGGCAATAACAGCAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR CAA 90 bp TCAGAAGAGCAGTCAGTGCTCTTGACCGCTGAGTCATCTCTCCAGTCCCAAGTACAGCTGGTTAAGTGTTaGTCTCAAATTATCTGTTGT +
Preference number: 5 (lower is better)
Translates to: SEEQSVLLTAESSLQSQVQLVKC*SQIICC
Trigger: ACAACAGATAATTTGAGACAAACACTTAACCAGCTG...TACTTGGGACTGGAGAGATGACTCAGCGGTCAAGAGCACTGACTGCTCTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp TGTGATTGCTGGGATTTGAACTCTGGACTTTCAGAAGAGCAGTCAGTGCTCTTGGTGTTCATGACAGACTaGATTTCCCTTTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: CDCWDLNSGLSEEQSVLLVFMTD*ISLLQA
Trigger: GGCTTGCAAAAGGGAAATCAAGTCTGTCATGAACAC...CAAGAGCACTGACTGCTCTTCTGAAAGTCCAGAGTTCAAATCCCAGCAATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp CAAATATCTGCAATCCTAGCACTCAAAAGGTCCAGCCAGGTCAGAGGATGGCATGATGCTCGGCAATGTTaGAACTATTCAACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: QISAILALKRSSQVRGWHDARQC*NYSTAS
Trigger: TGAAGCTGTTGAATAGTTCAAACATTGCCGAGCATC...ATGCCATCCTCTGACCTGGCTGGACCTTTTGAGTGCTAGGATTGCAGATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp CCTTGTCTGATCCTACAAATACATGAAAATAGATCTGAGGCAGGACAACAGCACTGGTGTATCTTGGACTaGGCAGCCTCTATTAGAGCT +
Preference number: 5 (lower is better)
Translates to: PCLILQIHENRSEAGQQHWCILD*AASIRA
Trigger: AGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCA...GTGCTGTTGTCCTGCCTCAGATCTATTTTCATGTATTTGTAGGATCAGACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp GAGTACACTATAGCTGTCTTCAGAAACACCAGAAGGGGGCGTCAGATCTCATTAAGCAGCTCATATCTTTaGTTGGTCAGCAATGTACAC +
Preference number: 5 (lower is better)
Translates to: EYTIAVFRNTRRGRQISLSSSYL*LVSNVH
Trigger: GTGTACATTGCTGACCAACAAAAGATATGAGCTGCT...TAATGAGATCTGACGCCCCCTTCTGGTGTTTCTGAAGACAGCTATAGTGTACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp AACAGCAACAAGGCATTTCTGAGACAGATGGCTGCAAACTCCACACTGGCTACACAGCTGGTTAAGTGTTaGTCTCAAATTATCTGTTGT +
Preference number: 5 (lower is better)
Translates to: NSNKAFLRQMAANSTLATQLVKC*SQIICC
Trigger: ACAACAGATAATTTGAGACAAACACTTAACCAGCTG...TGTAGCCAGTGTGGAGTTTGCAGCCATCTGTCTCAGAAATGCCTTGTTGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215155.2
ENSMUST00000217148.2
CDS-3UTR CAA 90 bp CCAGTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACACAAAAAGCACACCGCTaGGGCAAATTTTTCTTCGAA +
Preference number: 5 (lower is better)
Translates to: PVPSIFCFPCTKCRRGETQKAHR*GKFFFE
Trigger: TTCGAAGAAAAATTTGCCCAAGCGGTGTGCTTTTTG...TGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp GTCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAGAGATCTTTGTTTATATCTaGGAGACAGGCAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: VPSIFCFPCTKCRRGETEIFVYI*ETGKVL
Trigger: CAACACCTTGCCTGTCTCCAAGATATAAACAAAGAT...CTCTGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS-3UTR CAA 90 bp AGGACGGCAAGAAGATGCAGAGCTTTCTCAGCCTGGTGGGTTAATATATACAAGCAGCTGGTTAAGTGTTaGTCTCAAATTATCTGTTGT +
Preference number: 5 (lower is better)
Translates to: RTARRCRAFSAWWVNIYKQLVKC*SQIICC
Trigger: ACAACAGATAATTTGAGACAAACACTTAACCAGCTG...CTTGTATATATTAACCCACCAGGCTGAGAAAGCTCTGCATCTTCTTGCCGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213955.2
CDS-3UTR CAA 90 bp TCCCAAGTATCTTCTGCTTTCCATGTACCAAGTGTAGAAGAGGAGAAACAGAGAGATGCTCGGCAATGTTaGAACTATTCAACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: SQVSSAFHVPSVEEEKQRDARQC*NYSTAS
Trigger: TGAAGCTGTTGAATAGTTCAAACATTGCCGAGCATC...TCTCTGTTTCTCCTCTTCTACACTTGGTACATGGAAAGCAGAAGATACTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216785.2
CDS TCA 72 bp GGCGGACAGCTCCTTCTCCTGGTCCGTGACCCCAGATaGTTGGCCTGCCCCTTCATGCTTCTCTGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: GGQLLLLVRDPR*LACPFMLLCSL
Trigger: CAGGGAGCAGAGAAGCATGAAGGGGCAGGCCAATCATCTGGGGTCACGGACCAGGAGAAGGAGCTGTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000070117.8
ENSMUST00000213955.2
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
ENSMUST00000238809.2
CDS CCA 72 bp TTCGCACATAATCCCACAGTGCATCTCCATTGGCGATaGGGAGCGGGTCCGACCGCCCCTCCAGAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: FAHNPTVHLHWR*GAGPTAPPEAS
Trigger: TGAAGCCTCTGGAGGGGCGGTCGGACCCGCTCCCCATCGCCAATGGAGATGCACTGTGGGATTATGTGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238809.2
CDS CCA 72 bp ACAGTGTTCGCACATAATCCCACAGTGCATCTCCATTaGCGATGGGGAGCGGGTCCGACCGCCCCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: TVFAHNPTVHLH*RWGAGPTAPPE
Trigger: CTCTGGAGGGGCGGTCGGACCCGCTCCCCATCGCCAATGGAGATGCACTGTGGGATTATGTGCGAACACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238809.2
CDS TCA 72 bp CAAGGTGTTGCAGACAGGCATCATAATTTCCAGACGTaGAGGCCTGGAGGGCACTGGCGGACAGCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: QGVADRHHNFQT*RPGGHWRTAPS
Trigger: AGAAGGAGCTGTCCGCCAGTGCCCTCCAGGCCTTCACGTCTGGAAATTATGATGCCTGTCTGCAACACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070117.8
ENSMUST00000213955.2
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
ENSMUST00000238809.2
CDS TCA 72 bp AGCCGTAGCCAGAGACGAGGATTCGCGTGGTACACCTaGACAGCTTCAATCAGACACTCGAAGGCAGCGAGA +
Preference number: 6 (lower is better)
Translates to: SRSQRRGFAWYT*TASIRHSKAAR
Trigger: TCTCGCTGCCTTCGAGTGTCTGATTGAAGCTGTTCAGGTGTACCACGCGAATCCTCGTCTCTGGCTACGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
CDS CCA 72 bp AACTTTTTGCCTGGATCAGTGCCACCCGCACTGAGCTaGGCGCAGACGTTGTCATTTTCCTGCAGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: NFLPGSVPPALS*AQTLSFSCRAF
Trigger: GAAGGCTCTGCAGGAAAATGACAACGTCTGCGCCCAGCTCAGTGCGGGTGGCACTGATCCAGGCAAAAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
CDS CAA 90 bp AGGGACTTCATCTGGATGTACCCTCTGACTTTGTACTGGTGTATCTaGGACTTGGCAGCCTCTATTAGAGCTGCACTCTCAGCCTTAGGG +
Preference number: 6 (lower is better)
Translates to: RDFIWMYPLTLYWCI*DLAASIRAALSALG
Trigger: CCCTAAGGCTGAGAGTGCAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGTACAAAGTCAGAGGGTACATCCAGATGAAGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS TCA 72 bp TGCAAGCCTTCAGGGACTTCATCTGGATGTACCCTCTaGCTTTGTACTGGTGTATCTTGGACTTGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: CKPSGTSSGCTL*LCTGVSWTWQP
Trigger: AGGCTGCCAAGTCCAAGATACACCAGTACAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAAGGCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS CAA 90 bp CTTTTGCAAGCCTTCAGGGACTTCATCTGGATGTACCCTCTGACTTaGTACTGGTGTATCTTGGACTTGGCAGCCTCTATTAGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: LLQAFRDFIWMYPLT*YWCILDLAASIRAA
Trigger: TGCAGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGTACAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAAGGCTTGCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS CAA 90 bp GGTGCAGAATTTCCAGCTGTGTTCATGACAGACTTGATTTCCCTTTaGCAAGCCTTCAGGGACTTCATCTGGATGTACCCTCTGACTTTG +
Preference number: 6 (lower is better)
Translates to: GAEFPAVFMTDLISL*QAFRDFIWMYPLTL
Trigger: CAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAAGGCTTGCAAAAGGGAAATCAAGTCTGTCATGAACACAGCTGGAAATTCTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS CCA 72 bp AGGGACTTCATCTGGATGTACCCTCTGACTTTGTACTaGTGTATCTTGGACTTGGCAGCCTCTATTAGAGCT +
Preference number: 6 (lower is better)
Translates to: RDFIWMYPLTLY*CILDLAASIRA
Trigger: AGCTCTAATAGAGGCTGCCAAGTCCAAGATACACCAGTACAAAGTCAGAGGGTACATCCAGATGAAGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS CAA 90 bp AGAAACAGGGAAGGTGCAGAATTTCCAGCTGTGTTCATGACAGACTaGATTTCCCTTTTGCAAGCCTTCAGGGACTTCATCTGGATGTAC +
Preference number: 6 (lower is better)
Translates to: RNREGAEFPAVFMTD*ISLLQAFRDFIWMY
Trigger: GTACATCCAGATGAAGTCCCTGAAGGCTTGCAAAAGGGAAATCAAGTCTGTCATGAACACAGCTGGAAATTCTGCACCTTCCCTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS TCA 72 bp ATATGGCCTCCGTGTACTGGCGCAGATGATAGAGAATaGCAGCCTGGTTATAATACAGCATGCTGTTCTCAA +
Preference number: 6 (lower is better)
Translates to: IWPPCTGADDRE*QPGYNTACCSQ
Trigger: TTGAGAACAGCATGCTGTATTATAACCAGGCTGTCATTCTCTATCATCTGCGCCAGTACACGGAGGCCATAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS TCA 72 bp ACACCGCTTGGGCAAATTTTTCTTCGAAAGGTTCTATaGACTGATAGAGCTTCTCGCCGACAGATATGGCCT +
Preference number: 6 (lower is better)
Translates to: TPLGQIFLRKVL*TDRASRRQIWP
Trigger: AGGCCATATCTGTCGGCGAGAAGCTCTATCAGTTCATAGAACCTTTCGAAGAAAAATTTGCCCAAGCGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS CCA 72 bp AGGACGGCAAGAAGATGCAGAGCTTTCTCAGCCTGGTaGGTTAATATATACAAGTCTACGAGCAAAAAGCAC +
Preference number: 6 (lower is better)
Translates to: RTARRCRAFSAW*VNIYKSTSKKH
Trigger: GTGCTTTTTGCTCGTAGACTTGTATATATTAACCCACCAGGCTGAGAAAGCTCTGCATCTTCTTGCCGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS CAA 72 bp GAAGGTGCAGAATTTCCAGCTGTGTTCATGACAGACTaGATTTCCCTTTTGCAAGCCTTCAGGGACTTCATC +
Preference number: 6 (lower is better)
Translates to: EGAEFPAVFMTD*ISLLQAFRDFI
Trigger: GATGAAGTCCCTGAAGGCTTGCAAAAGGGAAATCAAGTCTGTCATGAACACAGCTGGAAATTCTGCACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS TCA 72 bp ACCTGTCTTCATGAAGCCTGGATGCTCGGCAATGTTTaGACTATTCAACAGCTTCACCGCTTTTCGATAGTT +
Preference number: 6 (lower is better)
Translates to: TCLHEAWMLGNV*TIQQLHRFSIV
Trigger: AACTATCGAAAAGCGGTGAAGCTGTTGAATAGTTCAAACATTGCCGAGCATCCAGGCTTCATGAAGACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
CDS TCA 72 bp GTCTGTCTTCATGAAGCCTGGATGCTCGGCAATGTTTaGACTATTCAACAGCTTCACCGCTTTTCGATAGTT +
Preference number: 6 (lower is better)
Translates to: VCLHEAWMLGNV*TIQQLHRFSIV
Trigger: AACTATCGAAAAGCGGTGAAGCTGTTGAATAGTTCAAACATTGCCGAGCATCCAGGCTTCATGAAGACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217148.2
CDS CCA 72 bp TCTAGGACGGCAAGAAGATGCAGAGCTTTCTCAGCCTaGTGGGTTAATATATACAAGTCTACGAGCAAAAAG +
Preference number: 6 (lower is better)
Translates to: SRTARRCRAFSA*WVNIYKSTSKK
Trigger: CTTTTTGCTCGTAGACTTGTATATATTAACCCACCAGGCTGAGAAAGCTCTGCATCTTCTTGCCGTCCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS CCA 72 bp TTGATTTCCCTTTTGCAAGCCTTCAGGGACTTCATCTaGATGTACCCTCTGACTTTGTACTGGTGTATCTTG +
Preference number: 6 (lower is better)
Translates to: LISLLQAFRDFI*MYPLTLYWCIL
Trigger: CAAGATACACCAGTACAAAGTCAGAGGGTACATCCAGATGAAGTCCCTGAAGGCTTGCAAAAGGGAAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
CDS CCA 72 bp GGATCCCACAGTTGTAGAGCAGCTCATATCTTTTGTTaGTCAGCAATGTACACATGGGTCTTCCAGAAAACT +
Preference number: 6 (lower is better)
Translates to: GSHSCRAAHIFC*SAMYTWVFQKT
Trigger: AGTTTTCTGGAAGACCCATGTGTACATTGCTGACCAACAAAAGATATGAGCTGCTCTACAACTGTGGGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070117.8
ENSMUST00000215155.2
ENSMUST00000216785.2
CDS CAA 90 bp TACTGCTGTATTCAGAATAATTTTGTAATCATCTTTGTTTATATCTaGGAGACAGGCAAGGTGTTGCAGACAGGCATCATAATTTCCAGA +
Preference number: 6 (lower is better)
Translates to: YCCIQNNFVIIFVYI*ETGKVLQTGIIISR
Trigger: TCTGGAAATTATGATGCCTGTCTGCAACACCTTGCCTGTCTCCAAGATATAAACAAAGATGATTACAAAATTATTCTGAATACAGCAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070117.8
ENSMUST00000213955.2
ENSMUST00000215155.2
ENSMUST00000216785.2
ENSMUST00000217148.2
ENSMUST00000238809.2