Pregenerated sensors for CNNM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025189Ensembl transcript IDs: ENSMUST00000165311.3, ENSMUST00000223787.2
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAGGTTGGGAGAGGTGGCTGTGGACTTAGCTAGAACACATGCATaGCTGAGCCTCAGGGCAGCCAGGCTAAACAAGGGGCATGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: SRLGEVAVDLARTHA*LSLRAARLNKGHVK Trigger: CTTCACATGCCCCTTGTTTAGCCTGGCTGCCCTGAGGCTCAGCCATGCATGTGTTCTAGCTAAGTCCACAGCCACCTCTCCCAACCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR TCA 90 bp | AAAATGAGCGTTCAACATTCCTGTGTCAAGCACAGTGAAGTCCCGTaGCAGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: KMSVQHSCVKHSEVP*QHGTSVLADLGTLW Trigger: CCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCTGTCACGGGACTTCACTGTGCTTGACACAGGAATGTTGAACGCTCATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR TCA 90 bp | GTGAAAAAGAAAAATGAGCGTTCAACATTCCTGTGTCAAGCACAGTaGAGTCCCGTGACAGCACGGCACATCCGTCCTGGCCGACCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VKKKNERSTFLCQAQ*SPVTARHIRPGRPG Trigger: CCCAGGTCGGCCAGGACGGATGTGCCGTGCTGTCACGGGACTTCACTGTGCTTGACACAGGAATGTTGAACGCTCATTTTTCTTTTTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR TCA 90 bp | GGGAATAGTTGGAGATTCAGCAGGCAGCACTGGATCTCTGGGCACTaGCTGGAGGTGTGCAAGGATGGGGTGGGAAACGAATCAGAAACT | + |
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Preference number: 1 (lower is better) Translates to: GNSWRFSRQHWISGH*LEVCKDGVGNESET Trigger: AGTTTCTGATTCGTTTCCCACCCCATCCTTGCACACCTCCAGTCAGTGCCCAGAGATCCAGTGCTGCCTGCTGAATCTCCAACTATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 90 bp | GTGTCAAGCACAGTGAAGTCCCGTGACAGCACGGCACATCCGTCCTaGCCGACCTGGGCACTCTTTGGTTTATCATGGCTACACAAATTT | + |
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Preference number: 1 (lower is better) Translates to: VSSTVKSRDSTAHPS*PTWALFGLSWLHKF Trigger: AAATTTGTGTAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCTGTCACGGGACTTCACTGTGCTTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR TCA 90 bp | TTCTGTGTCAGACTGGAGGCAACTGATAAAACGTGCCAGACTGACTaGGGGGTGAAGGGTGAAGGGCCGAATGTTCTGTCACTGATGGGA | + |
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Preference number: 1 (lower is better) Translates to: FCVRLEATDKTCQTD*GVKGEGPNVLSLMG Trigger: TCCCATCAGTGACAGAACATTCGGCCCTTCACCCTTCACCCCTCAGTCAGTCTGGCACGTTTTATCAGTTGCCTCCAGTCTGACACAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 90 bp | CAGGGCTCCCTTGTGAGATCTTGTTCCAAACTCATCATCACTTACTaGCCTAGGTCTGCGACACCAGCACTAAGGGCTGGCACTGTATTC | + |
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Preference number: 1 (lower is better) Translates to: QGSLVRSCSKLIITY*PRSATPALRAGTVF Trigger: GAATACAGTGCCAGCCCTTAGTGCTGGTGTCGCAGACCTAGGCCAGTAAGTGATGATGAGTTTGGAACAAGATCTCACAAGGGAGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 90 bp | ATAGTTGGAGATTCAGCAGGCAGCACTGGATCTCTGGGCACTGACTaGAGGTGTGCAAGGATGGGGTGGGAAACGAATCAGAAACTCAAA | + |
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Preference number: 1 (lower is better) Translates to: IVGDSAGSTGSLGTD*RCARMGWETNQKLK Trigger: TTTGAGTTTCTGATTCGTTTCCCACCCCATCCTTGCACACCTCCAGTCAGTGCCCAGAGATCCAGTGCTGCCTGCTGAATCTCCAACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 90 bp | CCCAGGGACACCAAAGAACAAAGATTATTATTGGGAGCCTCAGAATaGCATTCTCAGCTTTGCGTCGGCCCTGGCCAGTTCTTAGACTAT | + |
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Preference number: 1 (lower is better) Translates to: PRDTKEQRLLLGASE*HSQLCVGPGQFLDY Trigger: ATAGTCTAAGAACTGGCCAGGGCCGACGCAAAGCTGAGAATGCCATTCTGAGGCTCCCAATAATAATCTTTGTTCTTTGGTGTCCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 90 bp | TGTCCTGGAAGAAAGAATGGTGAATTCCAGGACATGGGTCTCCTGTaGCCCAGGGACACCAAAGAACAAAGATTATTATTGGGAGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: CPGRKNGEFQDMGLL*PRDTKEQRLLLGAS Trigger: TGAGGCTCCCAATAATAATCTTTGTTCTTTGGTGTCCCTGGGCCACAGGAGACCCATGTCCTGGAATTCACCATTCTTTCTTCCAGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 90 bp | AGCACTGGATCTCTGGGCACTGACTGGAGGTGTGCAAGGATGGGGTaGGAAACGAATCAGAAACTCAAACTTGACTTTGAAATTTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: STGSLGTDWRCARMG*ETNQKLKLDFEIFP Trigger: AGGGAAAATTTCAAAGTCAAGTTTGAGTTTCTGATTCGTTTCCCACCCCATCCTTGCACACCTCCAGTCAGTGCCCAGAGATCCAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR GCA 90 bp | GAACAAAGATTATTATTGGGAGCCTCAGAATGGCATTCTCAGCTTTaGGTCGGCCCTGGCCAGTTCTTAGACTATGCTACAGACAAAACC | + |
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Preference number: 1 (lower is better) Translates to: EQRLLLGASEWHSQL*VGPGQFLDYATDKT Trigger: GGTTTTGTCTGTAGCATAGTCTAAGAACTGGCCAGGGCCGACGCAAAGCTGAGAATGCCATTCTGAGGCTCCCAATAATAATCTTTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR TCA 90 bp | GACACCAGCACTAAGGGCTGGCACTGTATTCTGAGCAGGCAGGAGCAGGTTGGGCGAATGTTCTGTCACTaGTGGGAGGCCTTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: DTSTKGWHCILSRQEQVGRMFCH*WEALGV Trigger: CACCCCCAAGGCCTCCCATCAGTGACAGAACATTCG...CCCAACCTGCTCCTGCCTGCTCAGAATACAGTGCCAGCCCTTAGTGCTGGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | GACACCAGCACTAAGGGCTGGCACTGTATTCTGAGCAGGCAGGAGCAGGTTGGGCCGTCCTGGCCGACCTaGGCACTCTTTGGTTTATCA | + |
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Preference number: 2 (lower is better) Translates to: DTSTKGWHCILSRQEQVGPSWPT*ALFGLS Trigger: TGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGG...CCCAACCTGCTCCTGCCTGCTCAGAATACAGTGCCAGCCCTTAGTGCTGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGAACTTTACCTAGCAGGGCTCCCTTGTGAGATCTTGTTCCAAACTCATCATGGGAGGCCTTGGGGGTaGCGAGTGACGGGAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RELYLAGLPCEILFQTHHGRPWG*RVTGGW Trigger: CCACCCTCCCGTCACTCGCCACCCCCAAGGCCTCCC...ATGATGAGTTTGGAACAAGATCTCACAAGGGAGCCCTGCTAGGTAAAGTTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | AGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTAGACATGGGTCTCCTGTaGCCCAGGGACACCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: STAHPSWPTWALFGLSWLDMGLL*PRDTKE Trigger: TTCTTTGGTGTCCCTGGGCCACAGGAGACCCATGTC...TAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGGCACTGACTGGAGGTGTGCAAGGATGGGGTGGGAAACGAATCAGAAACGTGAATTCCAGGACATaGGTCTCCTGTGGCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LWALTGGVQGWGGKRIRNVNSRT*VSCGPG Trigger: CCCTGGGCCACAGGAGACCCATGTCCTGGAATTCAC...GTTTCTGATTCGTTTCCCACCCCATCCTTGCACACCTCCAGTCAGTGCCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGCTGTGGACTTAGCTAGAACACATGCATGGCTGAGCCTCAGGGCAGCCGGAGGTGTGCAAGGATaGGGTGGGAAACGAATCAGA | + |
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Preference number: 2 (lower is better) Translates to: EVAVDLARTHAWLSLRAAGGVQG*GGKRIR Trigger: TCTGATTCGTTTCCCACCCCATCCTTGCACACCTCC...GGCTGCCCTGAGGCTCAGCCATGCATGTGTTCTAGCTAAGTCCACAGCCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGCTGTGGACTTAGCTAGAACACATGCATGGCTGAGCCTCAGGGCAGCCCAGAAGAGGCATCTCTaGCTCCAAACTTCCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: EVAVDLARTHAWLSLRAAQKRHL*LQTSLP Trigger: TGGGAGGGAAGTTTGGAGCCAGAGATGCCTCTTCTG...GGCTGCCCTGAGGCTCAGCCATGCATGTGTTCTAGCTAAGTCCACAGCCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGGCACTGACTGGAGGTGTGCAAGGATGGGGTGGGAAACGAATCAGAAACTCTCTCTTTCTTCACTaGAGCCGAACTGCCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LWALTGGVQGWGGKRIRNSLFLH*SRTALP Trigger: GGGAAGGGCAGTTCGGCTGCAGTGAAGAAAGAGAGA...GTTTCTGATTCGTTTCCCACCCCATCCTTGCACACCTCCAGTCAGTGCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CAA 90 bp | ATGGGTCTCCTGTGGCCCAGGGACACCAAAGAACAAAGATTATTATaGGGAGCCTCAGAATGGCATTCTCAGCTTTGCGTCGGCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: MGLLWPRDTKEQRLL*GASEWHSQLCVGPG Trigger: GCCAGGGCCGACGCAAAGCTGAGAATGCCATTCTGAGGCTCCCAATAATAATCTTTGTTCTTTGGTGTCCCTGGGCCACAGGAGACCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CAA 90 bp | AGGCATCTCTGGCTCCAAACTTCCCTCCCATGGGCTACGGCCCTCTaGGCAATACCTACTGTGGGTTTGGTAGACAGTGGGCAAAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: RHLWLQTSLPWATAL*AIPTVGLVDSGQKL Trigger: TAACTTTTGCCCACTGTCTACCAAACCCACAGTAGGTATTGCCAAGAGGGCCGTAGCCCATGGGAGGGAAGTTTGGAGCCAGAGATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACATTGGGAGCCTCAGAATaGCATTCTCAGCTTTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: PGISKDPVLVGPNLPPLTLGASE*HSQLCV Trigger: GACGCAAAGCTGAGAATGCCATTCTGAGGCTCCCAA...TGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAATCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGCTGTGGACTTAGCTAGAACACATGCATGGCTGAGCCTCAGGGCAGCCAGGAGTAGATATGCATaGTCACTCTGCCATCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: EVAVDLARTHAWLSLRAARSRYA*SLCHLV Trigger: CACAAGATGGCAGAGTGACCATGCATATCTACTCCT...GGCTGCCCTGAGGCTCAGCCATGCATGTGTTCTAGCTAAGTCCACAGCCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACATCCCAGAATTCACTCTaGATTGCAGAAACATCGGGC | + |
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Preference number: 2 (lower is better) Translates to: PGISKDPVLVGPNLPPLTSQNSL*IAETSG Trigger: GCCCGATGTTTCTGCAATGCAGAGTGAATTCTGGGA...TGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAATCCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR TCA 90 bp | TCACTCTGCCATCTTGTGGTTATGATTAGAATTGCATCTGCCCCAACATCCAGGAGACTGACTGAGGGGTaGAGGGTGAAGGGCCGAATG | + |
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Preference number: 2 (lower is better) Translates to: SLCHLVVMIRIASAPTSRRLTEG*RVKGRM Trigger: CATTCGGCCCTTCACCCTTCACCCCTCAGTCAGTCT...CCTGGATGTTGGGGCAGATGCAATTCTAATCATAACCACAAGATGGCAGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR TCA 90 bp | AGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTATTTTCACTTAAAACCTaGAGTTCTGTATCTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: STAHPSWPTWALFGLSWLFSLKT*SSVSGS Trigger: TGAGCCAGATACAGAACTTCAGGTTTTAAGTGAAAA...TAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CAA 90 bp | GGAGGTGTGCAAGGATGGGGTGGGAAACGAATCAGAAACTCAAACTaGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACC | + |
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Preference number: 2 (lower is better) Translates to: GGVQGWGGKRIRNSN*TLKFSLGLVVFPNT Trigger: GGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTTTGAGTTTCTGATTCGTTTCCCACCCCATCCTTGCACACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR TCA 90 bp | AACTTGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATGGGTCTCTGTGTCCCCTaGACCTCCTCTTCTGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: NLTLKFSLGLVVFPNTYMGLCVP*TSSSEA Trigger: TGCTTCAGAAGAGGAGGTTCAGGGGACACAGAGACC...CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTATTCAAAACAGTTAAAAAGCCTTCCTGGATCTGGGAACTTTGAGAATACTGATGGGAGGCCTTaGGGGTGGCGAGTGACGGGA | + |
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Preference number: 2 (lower is better) Translates to: FHYSKQLKSLPGSGNFENTDGRP*GWRVTG Trigger: TCCCGTCACTCGCCACCCCCAAGGCCTCCCATCAGT...ATTCTCAAAGTTCCCAGATCCAGGAAGGCTTTTTAACTGTTTTGAATAATGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CAA 90 bp | GTGCAAGGATGGGGTGGGAAACGAATCAGAAACTCAAACTTGACTTaGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATG | + |
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Preference number: 2 (lower is better) Translates to: VQGWGGKRIRNSNLT*KFSLGLVVFPNTYM Trigger: CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTTTGAGTTTCTGATTCGTTTCCCACCCCATCCTTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CAA 90 bp | GGGATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATaGACAAGAATGCTTCACCACTTTATAATCAAACACTCTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: GISKDPVLVGPNLPP*TRMLHHFIIKHSSQ Trigger: TTGAGAAGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAATCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | TCACTCTGCCATCTTGTGGTTATGATTAGAATTGCATCTGCCCCAACATCCAGGCCTTCTGTGTCAGACTaGAGGCAACTGATAAAACGT | + |
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Preference number: 2 (lower is better) Translates to: SLCHLVVMIRIASAPTSRPSVSD*RQLIKR Trigger: ACGTTTTATCAGTTGCCTCCAGTCTGACACAGAAGG...CCTGGATGTTGGGGCAGATGCAATTCTAATCATAACCACAAGATGGCAGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | AACTTGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATGATCTGGCTCACAACTTaGTCTCTGTGTCCCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: NLTLKFSLGLVVFPNTYMIWLTT*SLCPLN Trigger: GTTCAGGGGACACAGAGACCAAGTTGTGAGCCAGAT...CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR TCA 90 bp | GACAAGAATGCTTCACCACTTTATAATCAAACACTCTTCTCAAGCATCCCAGAACAGGTCAACAACCCCTaGGTTAAAAGTTCCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: DKNASPLYNQTLFSSIPEQVNNP*VKSSCG Trigger: CCCACAGGAACTTTTAACTCAGGGGTTGTTGACCTG...TTCTGGGATGCTTGAGAAGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR TCA 90 bp | AACTTGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATGTTTGGAATACTTAGCTaGCCAGCAAGGGATGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: NLTLKFSLGLVVFPNTYMFGILS*PARDVV Trigger: TACTACATCCCTTGCTGGTCAGCTAAGTATTCCAAA...CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR GCA 90 bp | GACAAGAATGCTTCACCACTTTATAATCAAACACTCTTCTCAAGCATCCCAGAATATGCATGGTCACTCTaGCATCTTGTGGTTATGATT | + |
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Preference number: 2 (lower is better) Translates to: DKNASPLYNQTLFSSIPEYAWSL*HLVVMI Trigger: AATCATAACCACAAGATGGCAGAGTGACCATGCATA...TTCTGGGATGCTTGAGAAGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTATTCAAAACAGTTAAAAAGCCTTCCTGGATCTGGGAACTTTGAGAATGACCTGGGCACTCTTTaGTTTATCATGGCTACACAA | + |
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Preference number: 2 (lower is better) Translates to: FHYSKQLKSLPGSGNFENDLGTL*FIMATQ Trigger: TTGTGTAGCCATGATAAACCAAAGAGTGCCCAGGTC...ATTCTCAAAGTTCCCAGATCCAGGAAGGCTTTTTAACTGTTTTGAATAATGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR TCA 72 bp | GTTCAACATTCCTGTGTCAAGCACAGTGAAGTCCCGTaGCAGCACGGCACATCCGTCCTGGCCGACCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: VQHSCVKHSEVP*QHGTSVLADLG Trigger: GCCCAGGTCGGCCAGGACGGATGTGCCGTGCTGTCACGGGACTTCACTGTGCTTGACACAGGAATGTTGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CAA 90 bp | GACACCAGCACTAAGGGCTGGCACTGTATTCTGAGCAGGCAGGAGCAGGTTGGGATGGCATTCTCAGCTTaGCGTCGGCCCTGGCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: DTSTKGWHCILSRQEQVGMAFSA*RRPWPV Trigger: AACTGGCCAGGGCCGACGCAAAGCTGAGAATGCCAT...CCCAACCTGCTCCTGCCTGCTCAGAATACAGTGCCAGCCCTTAGTGCTGGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 72 bp | TCCCGTGACAGCACGGCACATCCGTCCTGGCCGACCTaGGCACTCTTTGGTTTATCATGGCTACACAAATTT | + |
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Preference number: 3 (lower is better) Translates to: SRDSTAHPSWPT*ALFGLSWLHKF Trigger: AAATTTGTGTAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCTGTCACGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CAA 90 bp | GACACCAGCACTAAGGGCTGGCACTGTATTCTGAGCAGGCAGGAGCAGGTTGGGAACTCAAACTTGACTTaGAAATTTTCCCTTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: DTSTKGWHCILSRQEQVGNSNLT*KFSLGL Trigger: CAGCCCAAGGGAAAATTTCAAAGTCAAGTTTGAGTT...CCCAACCTGCTCCTGCCTGCTCAGAATACAGTGCCAGCCCTTAGTGCTGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 72 bp | CTTGTGAGATCTTGTTCCAAACTCATCATCACTTACTaGCCTAGGTCTGCGACACCAGCACTAAGGGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LVRSCSKLIITY*PRSATPALRAG Trigger: GCCAGCCCTTAGTGCTGGTGTCGCAGACCTAGGCCAGTAAGTGATGATGAGTTTGGAACAAGATCTCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR-3UTR CAA 90 bp | CCAGGGATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACAGAACAAAGATTATTATaGGGAGCCTCAGAATGGCAT | + |
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Preference number: 3 (lower is better) Translates to: PGISKDPVLVGPNLPPLTEQRLL*GASEWH Trigger: ATGCCATTCTGAGGCTCCCAATAATAATCTTTGTTC...TGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAATCCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR GCA 72 bp | TTATTATTGGGAGCCTCAGAATGGCATTCTCAGCTTTaGGTCGGCCCTGGCCAGTTCTTAGACTATGCTACA | + |
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Preference number: 3 (lower is better) Translates to: LLLGASEWHSQL*VGPGQFLDYAT Trigger: TGTAGCATAGTCTAAGAACTGGCCAGGGCCGACGCAAAGCTGAGAATGCCATTCTGAGGCTCCCAATAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 72 bp | ACCAAAGAACAAAGATTATTATTGGGAGCCTCAGAATaGCATTCTCAGCTTTGCGTCGGCCCTGGCCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: TKEQRLLLGASE*HSQLCVGPGQF Trigger: GAACTGGCCAGGGCCGACGCAAAGCTGAGAATGCCATTCTGAGGCTCCCAATAATAATCTTTGTTCTTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| 3UTR CCA 72 bp | TTTGTCCTGGAAGAAAGAATGGTGAATTCCAGGACATaGGTCTCCTGTGGCCCAGGGACACCAAAGAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: FVLEERMVNSRT*VSCGPGTPKNK Trigger: TTTGTTCTTTGGTGTCCCTGGGCCACAGGAGACCCATGTCCTGGAATTCACCATTCTTTCTTCCAGGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR CCA 72 bp | TCTCTGGGCACTGACTGGAGGTGTGCAAGGATGGGGTaGGAAACGAATCAGAAACTCAAACTTGACTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLGTDWRCARMG*ETNQKLKLDFE Trigger: TTCAAAGTCAAGTTTGAGTTTCTGATTCGTTTCCCACCCCATCCTTGCACACCTCCAGTCAGTGCCCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR-3UTR CAA 90 bp | TCACTCTGCCATCTTGTGGTTATGATTAGAATTGCATCTGCCCCAACATCCAGGAACAGGGAACAATCCTaGTCCATCTGTCCATCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLCHLVVMIRIASAPTSRNREQS*SICPSL Trigger: CAGGGATGGACAGATGGACAAGGATTGTTCCCTGTT...CCTGGATGTTGGGGCAGATGCAATTCTAATCATAACCACAAGATGGCAGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAACTTTACCTAGCAGGGCTCCCTTGTGAGATCTTGTTCCAAACTCATCATGGATCTGGTAGGTTTTaGGAATACTTAGCTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RELYLAGLPCEILFQTHHGSGRF*EYLADQ Trigger: CTGGTCAGCTAAGTATTCCAAAAACCTACCAGATCC...ATGATGAGTTTGGAACAAGATCTCACAAGGGAGCCCTGCTAGGTAAAGTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR CCA 72 bp | AGAAAGAATGGTGAATTCCAGGACATGGGTCTCCTGTaGCCCAGGGACACCAAAGAACAAAGATTATTATTG | + |
|
Preference number: 3 (lower is better) Translates to: RKNGEFQDMGLL*PRDTKEQRLLL Trigger: CAATAATAATCTTTGTTCTTTGGTGTCCCTGGGCCACAGGAGACCCATGTCCTGGAATTCACCATTCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGAATGCTTCACCACTTTATAATCAAACACTCTTCTCAAGCATCCCAGAATATCTGGCTCACAACTaGGTCTCTGTGTCCCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: DKNASPLYNQTLFSSIPEYLAHN*VSVSPE Trigger: TTCAGGGGACACAGAGACCAAGTTGTGAGCCAGATA...TTCTGGGATGCTTGAGAAGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR GCA 72 bp | TACATGATTCGTAGGAGTAGATATGCATGGTCACTCTaGCATCTTGTGGTTATGATTAGAATTGCATCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: YMIRRSRYAWSL*HLVVMIRIASA Trigger: GGCAGATGCAATTCTAATCATAACCACAAGATGGCAGAGTGACCATGCATATCTACTCCTACGAATCATGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR CCA 72 bp | AATCAGAAACTCAAACTTGACTTTGAAATTTTCCCTTaGGCTGGTTGTGTTTCCCAACACCTACATGATTCG | + |
|
Preference number: 3 (lower is better) Translates to: NQKLKLDFEIFP*AGCVSQHLHDS Trigger: CGAATCATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTTTGAGTTTCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR TCA 72 bp | TCCCAGAATTCACTCTGCATTGCAGAAACATCGGGCTaGAAGTTCCATTATTCAAAACAGTTAAAAAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SQNSLCIAETSG*KFHYSKQLKSL Trigger: AAGGCTTTTTAACTGTTTTGAATAATGGAACTTTCAGCCCGATGTTTCTGCAATGCAGAGTGAATTCTGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | CGTGACAGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGGTTTATCAGGCAGCCACGGGAAGTaGACCCCCGCCTCGCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSTAHPSWPTWALFGLSGSHGK*TPASPE Trigger: CTCCGGCGAGGCGGGGGTTCACTTCCCGTGGCTGCC...TGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCTGTCACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | GACACCAGCACTAAGGGCTGGCACTGTATTCTGAGCAGGCAGGAGCAGGTTGGGGCAGATGGGTCCCCCTaGCGCGCACGGCCTGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: DTSTKGWHCILSRQEQVGADGSP*RARPAR Trigger: GCGTGCAGGCCGTGCGCGGCAGGGGGACCCATCTGC...CCCAACCTGCTCCTGCCTGCTCAGAATACAGTGCCAGCCCTTAGTGCTGGTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | GACACCAGCACTAAGGGCTGGCACTGTATTCTGAGCAGGCAGGAGCAGGTTGGGAGCAGTCCCGGAGCCTaGCACCCAGCGCTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DTSTKGWHCILSRQEQVGSSPGA*HPALLP Trigger: CGGCAGCAGCGCTGGGTGTCAGGCTCCGGGACTGCT...CCCAACCTGCTCCTGCCTGCTCAGAATACAGTGCCAGCCCTTAGTGCTGGTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | GTGGCGAGTGACGGGAGGGTGGGTCTTCCCCCAAAGCCTCAGAGTCTCACACTCCCTCAGAGTCGCTGCTaGAGGGGCTGGCCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VASDGRVGLPPKPQSLTLPQSRC*RGWPLD Trigger: ATCCAGAGGCCAGCCCCTGCAGCAGCGACTCTGAGG...GAGTGTGAGACTCTGAGGCTTTGGGGGAAGACCCACCCTCCCGTCACTCGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCTGTGGACTTAGCTAGAACACATGCATGGCTGAGCCTCAGGGCAGCCATCCGGGGACTGGGGTaGGCTGTCCATGTGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVAVDLARTHAWLSLRAAIRGLG*AVHVAG Trigger: GCCTGCCACATGGACAGCTCACCCCAGTCCCCGGAT...GGCTGCCCTGAGGCTCAGCCATGCATGTGTTCTAGCTAAGTCCACAGCCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | AGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTACACTGTGCGAGGCGATaGCCAACCCGTGGCGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STAHPSWPTWALFGLSWLHCARR*PTRGAS Trigger: GCTCGCGCCACGGGTTGGCCATCGCCTCGCACAGTG...TAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGCACTGACTGGAGGTGTGCAAGGATGGGGTGGGAAACGAATCAGAAACGGAAGGCAGCCGCCATaGGGAGCCGGGTCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LWALTGGVQGWGGKRIRNGRQPP*GAGSGT Trigger: TGTGCCTGACCCGGCTCCTCATGGCGGCTGCCTTCC...GTTTCTGATTCGTTTCCCACCCCATCCTTGCACACCTCCAGTCAGTGCCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGCACTGACTGGAGGTGTGCAAGGATGGGGTGGGAAACGAATCAGAAACAGGGTGCAGAGCAGATaGGTCCCCCTGCCGCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LWALTGGVQGWGGKRIRNRVQSR*VPLPRT Trigger: CGTGCGCGGCAGGGGGACCCATCTGCTCTGCACCCT...GTTTCTGATTCGTTTCCCACCCCATCCTTGCACACCTCCAGTCAGTGCCCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGCTGTGGACTTAGCTAGAACACATGCATGGCTGAGCCTCAGGGCAGCCCCTCCTCTACCACCTTaGTGCGCAGCTCCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVAVDLARTHAWLSLRAAPPLPP*CAAPGL Trigger: GAGCCCTGGAGCTGCGCACCAAGGTGGTAGAGGAGG...GGCTGCCCTGAGGCTCAGCCATGCATGTGTTCTAGCTAAGTCCACAGCCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GTGGCGAGTGACGGGAGGGTGGGTCTTCCCCCAAAGCCTCAGAGTCTCACACTCTCCATATCCGGGGACTaGGGTGAGCTGTCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VASDGRVGLPPKPQSLTLSISGD*GELSMW Trigger: CCACATGGACAGCTCACCCCAGTCCCCGGATATGGA...GAGTGTGAGACTCTGAGGCTTTGGGGGAAGACCCACCCTCCCGTCACTCGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GACACCAGCACTAAGGGCTGGCACTGTATTCTGAGCAGGCAGGAGCAGGTTGGGGGTGAGCTGTCCATGTaGCAGGCCGTGAGTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTSTKGWHCILSRQEQVGGELSM*QAVSAF Trigger: GAACGCACTCACGGCCTGCCACATGGACAGCTCACC...CCCAACCTGCTCCTGCCTGCTCAGAATACAGTGCCAGCCCTTAGTGCTGGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GTGGCGAGTGACGGGAGGGTGGGTCTTCCCCCAAAGCCTCAGAGTCTCACACTCGCCGTGAGTGCGTTCTaGTACTGTTGTCGTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VASDGRVGLPPKPQSLTLAVSAF*YCCRVI Trigger: GATCACACGACAACAGTACCAGAACGCACTCACGGC...GAGTGTGAGACTCTGAGGCTTTGGGGGAAGACCCACCCTCCCGTCACTCGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGGATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACATCGTGTAGAAGGTGCTaGTCTCCTGGCGCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGISKDPVLVGPNLPPLTSCRRC*SPGAEP Trigger: GGGCTCTGCGCCAGGAGATCAGCACCTTCTACACGA...TGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAATCCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | AGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTACCAGCCGGGTATCATTaGAGACACAATGCAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STAHPSWPTWALFGLSWLPAGYH*RHNAGA Trigger: GGCCCCTGCATTGTGTCTTCAATGATACCCGGCTGG...TAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | AGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTAAGTCCACCGGGCGGTTaGGCTGGTAGAGGTAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: STAHPSWPTWALFGLSWLSPPGG*AGRGSV Trigger: AACACTACCTCTACCAGCGCAACCGCCCGGTGGACT...TAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | ATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACAAGAATGTTGGAGTCTGGGGTGTaGCCCGGGTGGTGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISKDPVLVGPNLPPLTRMLESGV*PGWWGP Trigger: AGGCCCCCACCACCCGGGGCACACCCCAGACTCCAA...CATTCTTGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGCTGTGGACTTAGCTAGAACACATGCATGGCTGAGCCTCAGGGCAGCCGCAGGGGCTGGCCTCTaGATCCAGGTGGATATTACA | + |
|
Preference number: 4 (lower is better) Translates to: EVAVDLARTHAWLSLRAAAGAGL*IQVDIT Trigger: TGTAATATCCACCTGGATCCAGAGGCCAGCCCCTGC...GGCTGCCCTGAGGCTCAGCCATGCATGTGTTCTAGCTAAGTCCACAGCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | AGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTAAGCTCCAGGGCTCCCTaGATGATGTTGAGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STAHPSWPTWALFGLSWLSSRAP*MMLSSS Trigger: GGAAGAGCTCAACATCATTCAGGGAGCCCTGGAGCT...TAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCTGTGGACTTAGCTAGAACACATGCATGGCTGAGCCTCAGGGCAGCCCAGCGAGACTTGCTGTaGCCTGTGCTCCTCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVAVDLARTHAWLSLRAAQRDLL*PVLLKV Trigger: AACTTTGAGGAGCACAGGTCACAGCAAGTCTCGCTG...GGCTGCCCTGAGGCTCAGCCATGCATGTGTTCTAGCTAAGTCCACAGCCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | TCACTCTGCCATCTTGTGGTTATGATTAGAATTGCATCTGCCCCAACATCCAGGGCAGGAGGAAGCTGGTaGCTTCGGCCGCCCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCHLVVMIRIASAPTSRAGGSW*LRPPAG Trigger: CCCTGCGGGCGGCCGAAGGCACCAGCTTCCTCCTGC...CCTGGATGTTGGGGCAGATGCAATTCTAATCATAACCACAAGATGGCAGAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | CGTGACAGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGGTTTATCACGGTGTGGGACCCTCTaGTTTTTCCGATTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDSTAHPSWPTWALFGLSRCGTL*FFRLSV Trigger: CACTGACAATCGGAAAAAGCAGAGGGTCCCACACCG...TGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCTGTCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR CAA 72 bp | TGGCTCCAAACTTCCCTCCCATGGGCTACGGCCCTCTaGGCAATACCTACTGTGGGTTTGGTAGACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLQTSLPWATAL*AIPTVGLVDSG Trigger: CCCACTGTCTACCAAACCCACAGTAGGTATTGCCAAGAGGGCCGTAGCCCATGGGAGGGAAGTTTGGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | AACTTGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATGGGAACACGGCGCCGGTaGACACCAGCGCCGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLTLKFSLGLVVFPNTYMGTRRR*TPAPAA Trigger: GGCTGCCGGCGCTGGTGTGCACCGGCGCCGTGTTCC...CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | GACACCAGCACTAAGGGCTGGCACTGTATTCTGAGCAGGCAGGAGCAGGTTGGGATGTCCACAATGTTGTaGCTCTGGTCGCCCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: DTSTKGWHCILSRQEQVGMSTML*LWSPSY Trigger: GTATGAGGGCGACCAGAGGCACAACATTGTGGACAT...CCCAACCTGCTCCTGCCTGCTCAGAATACAGTGCCAGCCCTTAGTGCTGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | CCAGGGATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACATTCCGCCGAAGTCACTaGGCTCTCGGTTTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGISKDPVLVGPNLPPLTFRRSH*ALGLET Trigger: AGTCTCCAAACCGAGAGCGCAGTGACTTCGGCGGAA...TGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAATCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | ATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACAAGAATGTGTTGCTCAGGAGGGTaGGGACCGGGTCGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISKDPVLVGPNLPPLTRMCCSGG*GPGRPL Trigger: CAAAGGACGACCCGGTCCTCACCCTCCTGAGCAACA...CATTCTTGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | GAGAATCCACACACTAACAGGGAACAATCCTTGTCCATCTGTCCATCCCTGGAGAGCGATTCAACCCGCTaGAGCGAGAAGGGGACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ENPHTNREQSLSICPSLESDSTR*SEKGTG Trigger: ACCGGTCCCCTTCTCGCTGCAGCGGGTTGAATCGCT...CTCCAGGGATGGACAGATGGACAAGGATTGTTCCCTGTTAGTGTGTGGATTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTGTCCCCTGAACCTCCTCTTCTGAAGCAAGCTTATAGACTCGGGAAGCCCCTGCTGCTGTACAGTTaGGTGTTGCTTCCGCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSPEPPLLKQAYRLGKPLLLYS*VLLPPK Trigger: CTTCGGCGGAAGCAACACGCAACTGTACAGCAGCAG...GGGCTTCCCGAGTCTATAAGCTTGCTTCAGAAGAGGAGGTTCAGGGGACACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTGTCCCCTGAACCTCCTCTTCTGAAGCAAGCTTATAGACTCGGGAAGCCCTGCTGTTGTAGGAACTaGGACAGGGGACAGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSPEPPLLKQAYRLGKPCCCRN*DRGQRD Trigger: GTCTCGCTGTCCCCTGTCGCAGTTCCTACAACAGCA...GGGCTTCCCGAGTCTATAAGCTTGCTTCAGAAGAGGAGGTTCAGGGGACACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | AACTTGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATGCCCGCAGGAGGAAGCTaGTGCCTTCGGCCGCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLTLKFSLGLVVFPNTYMPAGGS*CLRPPA Trigger: TGCGGGCGGCCGAAGGCACCAGCTTCCTCCTGCGGG...CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | TCACTCTGCCATCTTGTGGTTATGATTAGAATTGCATCTGCCCCAACATCCAGGGTCAGGCACACACTGTaGGAGGCGATGGCCAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLCHLVVMIRIASAPTSRVRHTL*EAMANP Trigger: CGGGTTGGCCATCGCCTCGCACAGTGTGTGCCTGAC...CCTGGATGTTGGGGCAGATGCAATTCTAATCATAACCACAAGATGGCAGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | AGCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTATGTAGAGGTTGTTGCTaGTGCTGTACAGTTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: STAHPSWPTWALFGLSWLCRGCC*CCTVAC Trigger: ACACGCAACTGTACAGCAGCAGCAACAACCTCTACA...TAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | GAGAATCCACACACTAACAGGGAACAATCCTTGTCCATCTGTCCATCCCTGGAGGGGGACAGCGAGACTTaGTGTGACCTGTGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ENPHTNREQSLSICPSLEGDSET*CDLCSS Trigger: TGAGGAGCACAGGTCACAGCAAGTCTCGCTGTCCCC...CTCCAGGGATGGACAGATGGACAAGGATTGTTCCCTGTTAGTGTGTGGATTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GACAAGAATGCTTCACCACTTTATAATCAAACACTCTTCTCAAGCATCCCAGAACGGCCAGCGCGGCATTaGCGCCGGCTTGGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DKNASPLYNQTLFSSIPERPARH*RRLGPG Trigger: TCCTGGGCCAAGCCGGCGCCAATGCCGCGCTGGCCG...TTCTGGGATGCTTGAGAAGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | TCACTCTGCCATCTTGTGGTTATGATTAGAATTGCATCTGCCCCAACATCCAGGAAGGTGCTGATCTCCTaGCGCAGAGCCCAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCHLVVMIRIASAPTSRKVLIS*RRAQSR Trigger: CCTGGACTGGGCTCTGCGCCAGGAGATCAGCACCTT...CCTGGATGTTGGGGCAGATGCAATTCTAATCATAACCACAAGATGGCAGAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GAGAATCCACACACTAACAGGGAACAATCCTTGTCCATCTGTCCATCCCTGGAGACAATGTTGTGCCTCTaGTCGCCCTCATACACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENPHTNREQSLSICPSLETMLCL*SPSYTG Trigger: CCCGGTGTATGAGGGCGACCAGAGGCACAACATTGT...CTCCAGGGATGGACAGATGGACAAGGATTGTTCCCTGTTAGTGTGTGGATTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | CCCAACCTTCCCCCATTGACAAGAATGCTTCACCACTTTATAATCAAACACTCTGACCGGGTCGTCCTTTaGAGTCTGGGGTGTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PNLPPLTRMLHHFIIKHSDRVVL*SLGCAP Trigger: CGGGGCACACCCCAGACTCCAAAGGACGACCCGGTC...AGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTCAATGGGGGAAGGTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GACAAAACCATTTCTAGCGTCTTCCATTACAGGCGTCTCCTTCTGTGTCAGACTGGCTGCATGGCAAGCTaGTCCTGTTGCTCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DKTISSVFHYRRLLLCQTGCMAS*SCCSGG Trigger: CCCTCCTGAGCAACAGGACCAGCTTGCCATGCAGCC...AGTCTGACACAGAAGGAGACGCCTGTAATGGAAGACGCTAGAAATGGTTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | AACTTGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATGCGCTGCTGCAGGGGCTaGCCTCTGGATCCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLTLKFSLGLVVFPNTYMRCCRG*PLDPGG Trigger: TCCACCTGGATCCAGAGGCCAGCCCCTGCAGCAGCG...CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGGATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACATCTGATCTCGGAGTCTaGAAGCTTGAACAGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGISKDPVLVGPNLPPLTSDLGV*KLEQRE Trigger: TTCTCTCTGTTCAAGCTTTCAGACTCCGAGATCAGA...TGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAATCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTACACAAATTTTAACAACCCATGTGGCAGGCCGTaGGTGCGTTCTGGTACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRPGHSLVYHGYTNFNNPCGRP*VRSGTV Trigger: AACAGTACCAGAACGCACTCACGGCCTGCCACATGG...GTTGTTAAAATTTGTGTAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | ATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACAAGAATGAGAGGTTGTTGCTGCTaGTGTACAGTTGCGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISKDPVLVGPNLPPLTRMRGCCC*CTVACC Trigger: GCAACACGCAACTGTACAGCAGCAGCAACAACCTCT...CATTCTTGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR CAA 72 bp | CTGTGGCCCAGGGACACCAAAGAACAAAGATTATTATaGGGAGCCTCAGAATGGCATTCTCAGCTTTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWPRDTKEQRLL*GASEWHSQLCV Trigger: GACGCAAAGCTGAGAATGCCATTCTGAGGCTCCCAATAATAATCTTTGTTCTTTGGTGTCCCTGGGCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR CAA 72 bp | TGTGGGGAGAATCCACACACTAACAGGGAACAATCCTaGTCCATCTGTCCATCCCTGGAGCTGATTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CGENPHTNREQS*SICPSLELIFT Trigger: TGTGAAAATCAGCTCCAGGGATGGACAGATGGACAAGGATTGTTCCCTGTTAGTGTGTGGATTCTCCCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR CAA 72 bp | GCACGGCACATCCGTCCTGGCCGACCTGGGCACTCTTaGGTTTATCATGGCTACACAAATTTTAACAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: ARHIRPGRPGHS*VYHGYTNFNNL Trigger: TAAGTTGTTAAAATTTGTGTAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGGACGGATGTGCCGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | TCACTCTGCCATCTTGTGGTTATGATTAGAATTGCATCTGCCCCAACATCCAGGCGAACTGCACATCACTaGGAATGTGCACCGAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCHLVVMIRIASAPTSRRTAHH*ECAPSS Trigger: ACTACTCGGTGCACATTCTCAGTGATGTGCAGTTCG...CCTGGATGTTGGGGCAGATGCAATTCTAATCATAACCACAAGATGGCAGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | AGGGAACTTTACCTAGCAGGGCTCCCTTGTGAGATCTTGTTCCAAACTCATCATGTGTGTAGAGGTTGTTaGTGCTGCTGTACAGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RELYLAGLPCEILFQTHHVCRGC*CCCTVA Trigger: CGCAACTGTACAGCAGCAGCAACAACCTCTACACAC...ATGATGAGTTTGGAACAAGATCTCACAAGGGAGCCCTGCTAGGTAAAGTTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GAGAATCCACACACTAACAGGGAACAATCCTTGTCCATCTGTCCATCCCTGGAGTCACTCTCTGGACAATaGCCAAGTGAGATTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ENPHTNREQSLSICPSLESLSGQ*PSEIFP Trigger: AGGGAAAATCTCACTTGGCCATTGTCCAGAGAGTGA...CTCCAGGGATGGACAGATGGACAAGGATTGTTCCCTGTTAGTGTGTGGATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | ATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACAAGAATGGCTGGTCATGATGGCTaGAACACCATAGTAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISKDPVLVGPNLPPLTRMAGHDG*NTIVGK Trigger: TTTACCTACTATGGTGTTCCAGCCATCATGACCAGC...CATTCTTGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | GAGAATCCACACACTAACAGGGAACAATCCTTGTCCATCTGTCCATCCCTGGAGTGGACAATGGCCAAGTaGGATTTTCCCTTCTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ENPHTNREQSLSICPSLEWTMAK*DFPFLN Trigger: GTTTAAGAAGGGAAAATCTCACTTGGCCATTGTCCA...CTCCAGGGATGGACAGATGGACAAGGATTGTTCCCTGTTAGTGTGTGGATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | AACTTGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATGAGCAAGCGCTGGTCATaGTGGCTGGAACACCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLTLKFSLGLVVFPNTYMSKRWS*WLEHHS Trigger: ACTATGGTGTTCCAGCCATCATGACCAGCGCTTGCT...CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GACAAGAATGCTTCACCACTTTATAATCAAACACTCTTCTCAAGCATCCCAGAACCTTCTCTCCCGGTGTaGGACCCTCTGCTTTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DKNASPLYNQTLFSSIPEPSLPV*DPLLFP Trigger: CGGAAAAAGCAGAGGGTCCCACACCGGGAGAGAAGG...TTCTGGGATGCTTGAGAAGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| 3UTR CAA 72 bp | AAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATaGACAAGAATGCTTCACCACTTTATAATCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KDPVLVGPNLPP*TRMLHHFIIKH Trigger: GTGTTTGATTATAAAGTGGTGAAGCATTCTTGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR TCA 90 bp | CTAAGCATGAACTATGGTAGAAAGCATTATTTTGTCCTGGAAGAAAGAATGGTGCCACTTCTGTGGCCATaGAGCGGTGTGTGGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSMNYGRKHYFVLEERMVPLLWP*SGVWQA Trigger: TGCTTGCCACACACCGCTTCATGGCCACAGAAGTGG...CACCATTCTTTCTTCCAGGACAAAATAATGCTTTCTACCATAGTTCATGCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTACACAAATTTTAACAACTTCTCAGCAGCTTCTTaGCCATGTTTTCCTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRPGHSLVYHGYTNFNNFSAAS*PCFPQS Trigger: ACTCTGAGGAAAACATGGGCAAGAAGCTGCTGAGAA...GTTGTTAAAATTTGTGTAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | AACTTGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATGTGTGCTCCTCAAAGTTaGGCATCTCTTCTTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLTLKFSLGLVVFPNTYMCAPQS*ASLLGG Trigger: TCCCCCAAGAAGAGATGCCCAACTTTGAGGAGCACA...CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR GCA 90 bp | CCCAACCTTCCCCCATTGACAAGAATGCTTCACCACTTTATAATCAAACACTCTCCTCCAGAGTCACAATaGCCATCACCTCATAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNLPPLTRMLHHFIIKHSPPESQ*PSPHRK Trigger: CTTTCTATGAGGTGATGGGCATTGTGACTCTGGAGG...AGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTCAATGGGGGAAGGTTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTACACAAATTTTAACAACTCAAACTTAAGCTCCTaGATCACGTTGGGATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRPGHSLVYHGYTNFNNSNLSS*ITLGCF Trigger: GAAACATCCCAACGTGATCCAGGAGCTTAAGTTTGA...GTTGTTAAAATTTGTGTAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | GACAAGAATGCTTCACCACTTTATAATCAAACACTCTTCTCAAGCATCCCAGAAACTGCGCTCTCGGTTTaGAGACTCGGAGCGATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DKNASPLYNQTLFSSIPETALSV*RLGAIQ Trigger: TTGAATCGCTCCGAGTCTCCAAACCGAGAGCGCAGT...TTCTGGGATGCTTGAGAAGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CCA 90 bp | CTAAGCATGAACTATGGTAGAAAGCATTATTTTGTCCTGGAAGAAAGAATGGTGGCTCCTGGATCACGTTaGGATGTTTCAGAAGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSMNYGRKHYFVLEERMVAPGSR*DVSEAG Trigger: TCCGGCTTCTGAAACATCCCAACGTGATCCAGGAGC...CACCATTCTTTCTTCCAGGACAAAATAATGCTTTCTACCATAGTTCATGCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS TCA 90 bp | AGGACCTCCACGTCCGACGCCCAGTCGCTCTGCTCGCGGCAGCGCTaGGGTCCCGGGGGACGCGTGGGGACCGCGCTGGGCGCCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RTSTSDAQSLCSRQR*GPGGRVGTALGAAP Trigger: CGGCGCGGCGCCCAGCGCGGTCCCCACGCGTCCCCCGGGACCTCAGCGCTGCCGCGAGCAGAGCGACTGGGCGTCGGACGTGGAGGTCCT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | CGCGGGCGGACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTGGTGGTaGCAAGCGCGCCCGTCCCAGGCGCACAGCGAAAAGAGCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RGRTRSRKPPAAPWW*QARPSQAHSEKSFP Trigger: CGGGAAGCTCTTTTCGCTGTGCGCCTGGGACGGGCGCGCTTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGTCCGCCCGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | TGGGTCCCCCTGCCGCGCACGGCCTGCACGCGGCGCGCCTGCTCCTaGTCGGCGGCCGAGCCACTGTTCCGCAGCACCCGTAACTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: WVPLPRTACTRRACS*SAAEPLFRSTRNST Trigger: GGTGGAGTTACGGGTGCTGCGGAACAGTGGCTCGGCCGCCGAGCAGGAGCAGGCGCGCCGCGTGCAGGCCGTGCGCGGCAGGGGGACCCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CCA 90 bp | AGGCGCGGGCGGACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTGGTaGTGCCAAGCGCGCCCGTCCCAGGCGCACAGCGAAAAGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRGRTRSRKPPAAPW*CQARPSQAHSEKSF Trigger: GAAGCTCTTTTCGCTGTGCGCCTGGGACGGGCGCGCTTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGTCCGCCCGCGCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | AGCAGATGGGTCCCCCTGCCGCGCACGGCCTGCACGCGGCGCGCCTaGTCCTGCTCGGCGGCCGAGCCACTGTTCCGCAGCACCCGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRWVPLPRTACTRRA*SCSAAEPLFRSTRN Trigger: GTTACGGGTGCTGCGGAACAGTGGCTCGGCCGCCGAGCAGGAGCAGGCGCGCCGCGTGCAGGCCGTGCGCGGCAGGGGGACCCATCTGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | AGTAGACCCGCAGGAGGAAGCTGGTGCCTTCGGCCGCCCGCAGGGTaGCCCCCTCCAGAGACACGCGGCCTCCGGCAGTGTCTTCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRPAGGSWCLRPPAG*PPPETRGLRQCLRV Trigger: GACCCGAAGACACTGCCGGAGGCCGCGTGTCTCTGGAGGGGGGCACCCTGCGGGCGGCCGAAGGCACCAGCTTCCTCCTGCGGGTCTACT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS TCA 90 bp | CCAGGAGGCGGCCCAGAGGGTAGCACACCGGGAAGGCAGCCGCCATaGGGAGCCGGGTCAGGCACACACTGTGCGAGGCGATGGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: PGGGPEGSTPGRQPP*GAGSGTHCARRWPT Trigger: GGTTGGCCATCGCCTCGCACAGTGTGTGCCTGACCCGGCTCCTCATGGCGGCTGCCTTCCCGGTGTGCTACCCTCTGGGCCGCCTCCTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | ACACCGAGTACGGACAGATCTCGGCTCCCAGGAACACGGCGCCGGTaGACACCAGCGCCGGCAGCCACGGGAAGTGAACCCCCGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TPSTDRSRLPGTRRR*TPAPAATGSEPPPR Trigger: GCGAGGCGGGGGTTCACTTCCCGTGGCTGCCGGCGCTGGTGTGCACCGGCGCCGTGTTCCTGGGAGCCGAGATCTGTCCGTACTCGGTGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | ACCGGGAAGGCAGCCGCCATGAGGAGCCGGGTCAGGCACACACTGTaGGAGGCGATGGCCAACCCGTGGCGCGAGCACACCGAGTACGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGKAAAMRSRVRHTL*EAMANPWREHTEYG Trigger: TCCGTACTCGGTGTGCTCGCGCCACGGGTTGGCCATCGCCTCGCACAGTGTGTGCCTGACCCGGCTCCTCATGGCGGCTGCCTTCCCGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS TCA 90 bp | CATCCGAGCGGCTGCATGGCAAGCTGGTCCTGTTGCTCAGGAGGGTaGGGACCGGGTCGTCCTTTGGAGTCTGGGGTGTGCCCCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPSGCMASWSCCSGG*GPGRPLESGVCPGW Trigger: CCACCCGGGGCACACCCCAGACTCCAAAGGACGACCCGGTCCTCACCCTCCTGAGCAACAGGACCAGCTTGCCATGCAGCCGCTCGGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CCA 90 bp | AGGAGCCGGGTCAGGCACACACTGTGCGAGGCGATGGCCAACCCGTaGCGCGAGCACACCGAGTACGGACAGATCTCGGCTCCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSRVRHTLCEAMANP*REHTEYGQISAPRN Trigger: GTTCCTGGGAGCCGAGATCTGTCCGTACTCGGTGTGCTCGCGCCACGGGTTGGCCATCGCCTCGCACAGTGTGTGCCTGACCCGGCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CCA 90 bp | GTACACAACCTCGCCTGGGCTTCTCAGACCATCCGAGCGGCTGCATaGCAAGCTGGTCCTGTTGCTCAGGAGGGTGAGGACCGGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VHNLAWASQTIRAAA*QAGPVAQEGEDRVV Trigger: GACGACCCGGTCCTCACCCTCCTGAGCAACAGGACCAGCTTGCCATGCAGCCGCTCGGATGGTCTGAGAAGCCCAGGCGAGGTTGTGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCGAGTGACGGGAGGGTGGGTCTTCCCCCAAAGCCTCAGAGTCTCACACTCACCTCCTCTACCACCTaGGTGCGCAGCTCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VASDGRVGLPPKPQSLTLTSSTT*VRSSRA Trigger: AGCCCTGGAGCTGCGCACCAAGGTGGTAGAGGAGGT...GAGTGTGAGACTCTGAGGCTTTGGGGGAAGACCCACCCTCCCGTCACTCGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS CCA 90 bp | GTACAGTTGCGTGTTGCTTCCGCCGAAGTCACTGCGCTCTCGGTTTaGAGACTCGGAGCGATTCAACCCGCTGCAGCGAGAAGGGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: VQLRVASAEVTALSV*RLGAIQPAAARRGP Trigger: CGGTCCCCTTCTCGCTGCAGCGGGTTGAATCGCTCCGAGTCTCCAAACCGAGAGCGCAGTGACTTCGGCGGAAGCAACACGCAACTGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CCA 90 bp | GCCTTGGTGGAGTCCCCATCAGTGAAGGCTTCCATATCCGGGGACTaGGGTGAGCTGTCCATGTGGCAGGCCGTGAGTGCGTTCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ALVESPSVKASISGD*GELSMWQAVSAFWY Trigger: GTACCAGAACGCACTCACGGCCTGCCACATGGACAGCTCACCCCAGTCCCCGGATATGGAAGCCTTCACTGATGGGGACTCCACCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CCA 90 bp | TTGGGGGAAGGCCATCTCCTCCATCCTCAGGTACACAACCTCGCCTaGGCTTCTCAGACCATCCGAGCGGCTGCATGGCAAGCTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGEGHLLHPQVHNLA*ASQTIRAAAWQAGP Trigger: AGGACCAGCTTGCCATGCAGCCGCTCGGATGGTCTGAGAAGCCCAGGCGAGGTTGTGTACCTGAGGATGGAGGAGATGGCCTTCCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS TCA 90 bp | TCTCGGATACAGTGGCGAAGTCAAGCACGGCGTCAGAGCGCAACATaGAGCAGTCCCCTAGAGGGGTCAGCACCTCCTCTACCACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRIQWRSQARRQSAT*SSPLEGSAPPLPPW Trigger: CCAAGGTGGTAGAGGAGGTGCTGACCCCTCTAGGGGACTGCTTCATGTTGCGCTCTGACGCCGTGCTTGACTTCGCCACTGTATCCGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | AGTCACTGCGCTCTCGGTTTGGAGACTCGGAGCGATTCAACCCGCTaGAGCGAGAAGGGGACCGGTTTAGGAAGACAGAGGATCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHCALGLETRSDSTR*SEKGTGLGRQRIQP Trigger: TGGCTGGATCCTCTGTCTTCCTAAACCGGTCCCCTTCTCGCTGCAGCGGGTTGAATCGCTCCGAGTCTCCAAACCGAGAGCGCAGTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS GCA 90 bp | TGTTGCTGCTGCTGTACAGTTGCGTGTTGCTTCCGCCGAAGTCACTaGGCTCTCGGTTTGGAGACTCGGAGCGATTCAACCCGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCTVACCFRRSH*ALGLETRSDSTRCS Trigger: GCTGCAGCGGGTTGAATCGCTCCGAGTCTCCAAACCGAGAGCGCAGTGACTTCGGCGGAAGCAACACGCAACTGTACAGCAGCAGCAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS-3UTR CAA 90 bp | GAGAATCCACACACTAACAGGGAACAATCCTTGTCCATCTGTCCATCCCTGGAGGGCATTGGCGCCGGCTaGGCCCAGGAGCAGGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ENPHTNREQSLSICPSLEGIGAG*AQEQGA Trigger: TGCACCCTGCTCCTGGGCCAAGCCGGCGCCAATGCC...CTCCAGGGATGGACAGATGGACAAGGATTGTTCCCTGTTAGTGTGTGGATTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CAA 90 bp | GACACCAGCACTAAGGGCTGGCACTGTATTCTGAGCAGGCAGGAGCAGGTTGGGGCTGCTGCTGTACAGTaGCGTGTTGCTTCCGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: DTSTKGWHCILSRQEQVGAAAVQ*RVASAE Trigger: TTCGGCGGAAGCAACACGCAACTGTACAGCAGCAGC...CCCAACCTGCTCCTGCCTGCTCAGAATACAGTGCCAGCCCTTAGTGCTGGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS CCA 90 bp | CGACAGGGGACAGCGAGACTTGCTGTGACCTGTGCTCCTCAAAGTTaGGCATCTCTTCTTGGGGGAAGGCCATCTCCTCCATCCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RQGTARLAVTCAPQS*ASLLGGRPSPPSSG Trigger: ACCTGAGGATGGAGGAGATGGCCTTCCCCCAAGAAGAGATGCCCAACTTTGAGGAGCACAGGTCACAGCAAGTCTCGCTGTCCCCTGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | AGTCAGGTGTGTAGAGGTTGTTGCTGCTGCTGTACAGTTGCGTGTTaGTTCCGCCGAAGTCACTGCGCTCTCGGTTTGGAGACTCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQVCRGCCCCCTVAC*FRRSHCALGLETRS Trigger: GCTCCGAGTCTCCAAACCGAGAGCGCAGTGACTTCGGCGGAAGCAACACGCAACTGTACAGCAGCAGCAACAACCTCTACACACCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | TCCGAAGCTGCTGTTGTAGGAACTGCGACAGGGGACAGCGAGACTTaGTGTGACCTGTGCTCCTCAAAGTTGGGCATCTCTTCTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SEAAVVGTATGDSET*CDLCSSKLGISSWG Trigger: CCCCCAAGAAGAGATGCCCAACTTTGAGGAGCACAGGTCACAGCAAGTCTCGCTGTCCCCTGTCGCAGTTCCTACAACAGCAGCTTCGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CCA 90 bp | GGGGACTGGGGTGAGCTGTCCATGTGGCAGGCCGTGAGTGCGTTCTaGTACTGTTGTCGTGTGATCTTCACGAACTGCACATCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GDWGELSMWQAVSAF*YCCRVIFTNCTSLR Trigger: TCTCAGTGATGTGCAGTTCGTGAAGATCACACGACAACAGTACCAGAACGCACTCACGGCCTGCCACATGGACAGCTCACCCCAGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CCA 90 bp | TCAGTGAAGGCTTCCATATCCGGGGACTGGGGTGAGCTGTCCATGTaGCAGGCCGTGAGTGCGTTCTGGTACTGTTGTCGTGTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVKASISGDWGELSM*QAVSAFWYCCRVIF Trigger: GAAGATCACACGACAACAGTACCAGAACGCACTCACGGCCTGCCACATGGACAGCTCACCCCAGTCCCCGGATATGGAAGCCTTCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 90 bp | GAATGTCCACAATGTTGTGCCTCTGGTCGCCCTCATACACCGGGATaGGAGTGTAGCCACTACGGAGGATCTCGGATACAGTGGCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ECPQCCASGRPHTPG*ECSHYGGSRIQWRS Trigger: ACTTCGCCACTGTATCCGAGATCCTCCGTAGTGGCTACACTCGCATCCCGGTGTATGAGGGCGACCAGAGGCACAACATTGTGGACATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 90 bp | GAGACTTGCTGTGACCTGTGCTCCTCAAAGTTGGGCATCTCTTCTTaGGGGAAGGCCATCTCCTCCATCCTCAGGTACACAACCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ETCCDLCSSKLGISS*GKAISSILRYTTSP Trigger: AGGCGAGGTTGTGTACCTGAGGATGGAGGAGATGGCCTTCCCCCAAGAAGAGATGCCCAACTTTGAGGAGCACAGGTCACAGCAAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CCA 90 bp | GCAGCTTCTTGCCCATGTTTTCCTCAGAGTCGCTGCTGCAGGGGCTaGCCTCTGGATCCAGGTGGATATTACAGCATTCAGGATCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AASCPCFPQSRCCRG*PLDPGGYYSIQDPK Trigger: CTTCGGATCCTGAATGCTGTAATATCCACCTGGATCCAGAGGCCAGCCCCTGCAGCAGCGACTCTGAGGAAAACATGGGCAAGAAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTACACAAATTTTAACAACGGACCGGGTCGTCCTTaGGAGTCTGGGGTGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRPGHSLVYHGYTNFNNGPGRP*ESGVCP Trigger: GGGGCACACCCCAGACTCCAAAGGACGACCCGGTCC...GTTGTTAAAATTTGTGTAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS TCA 90 bp | GGCAAGCAGCAGCTGTGGCGAGATCTTGACTCTGATCTCGGAGTCTaGAAGCTTGAACAGAGAGAAATCATGCCGCCTTCTCTCCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GKQQLWRDLDSDLGV*KLEQREIMPPSLPV Trigger: CACCGGGAGAGAAGGCGGCATGATTTCTCTCTGTTCAAGCTTTCAGACTCCGAGATCAGAGTCAAGATCTCGCCACAGCTGCTGCTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 90 bp | TCAAGGTTCTCAGCAGCTTCTTGCCCATGTTTTCCTCAGAGTCGCTaGTGCAGGGGCTGGCCTCTGGATCCAGGTGGATATTACAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SRFSAASCPCFPQSR*CRGWPLDPGGYYSI Trigger: AATGCTGTAATATCCACCTGGATCCAGAGGCCAGCCCCTGCAGCAGCGACTCTGAGGAAAACATGGGCAAGAAGCTGCTGAGAACCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACAAGAATGGTTGGGCATCTCTTCTaGGGGGAAGGCCATCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISKDPVLVGPNLPPLTRMVGHLF*GEGHLL Trigger: GAGGAGATGGCCTTCCCCCAAGAAGAGATGCCCAAC...CATTCTTGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| CDS GCA 90 bp | TTGACTCTGATCTCGGAGTCTGAAAGCTTGAACAGAGAGAAATCATaGCGCCTTCTCTCCCGGTGTGGGACCCTCTGCTTTTTCCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: LTLISESESLNREKS*RLLSRCGTLCFFRL Trigger: CAATCGGAAAAAGCAGAGGGTCCCACACCGGGAGAGAAGGCGGCATGATTTCTCTCTGTTCAAGCTTTCAGACTCCGAGATCAGAGTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTAAGGACCCTGTCTTGGTGGGTCCCAACCTTCCCCCATTGACAAGAATGTCTCCTTCACCCTCGTaGTTCACTCTCTGGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: ISKDPVLVGPNLPPLTRMSPSPS*FTLWTM Trigger: CATTGTCCAGAGAGTGAACAACGAGGGTGAAGGAGA...CATTCTTGTCAATGGGGGAAGGTTGGGACCCACCAAGACAGGGTCCTTAGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CAA 90 bp | CCTGGCCGACCTGGGCACTCTTTGGTTTATCATGGCTACACAAATTTTAACAACAGAATGTCCACAATGTaGTGCCTCTGGTCGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGRPGHSLVYHGYTNFNNRMSTM*CLWSPS Trigger: TGAGGGCGACCAGAGGCACAACATTGTGGACATTCT...GTTGTTAAAATTTGTGTAGCCATGATAAACCAAAGAGTGCCCAGGTCGGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CAA 90 bp | AACTTGACTTTGAAATTTTCCCTTGGGCTGGTTGTGTTTCCCAACACCTACATGAGCTCCTGGATCACGTaGGGATGTTTCAGAAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: NLTLKFSLGLVVFPNTYMSSWIT*GCFRSR Trigger: CCGGCTTCTGAAACATCCCAACGTGATCCAGGAGCT...CATGTAGGTGTTGGGAAACACAACCAGCCCAAGGGAAAATTTCAAAGTCAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CAA 90 bp | GACAAGAATGCTTCACCACTTTATAATCAAACACTCTTCTCAAGCATCCCAGAATCCAGCCGGGTATCATaGAAGACACAATGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DKNASPLYNQTLFSSIPESSRVS*KTQCRG Trigger: GCCCCTGCATTGTGTCTTCAATGATACCCGGCTGGA...TTCTGGGATGCTTGAGAAGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
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| CDS-3UTR CAA 90 bp | TCACTCTGCCATCTTGTGGTTATGATTAGAATTGCATCTGCCCCAACATCCAGGTCGGAGTCTGAAAGCTaGAACAGAGAGAAATCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SLCHLVVMIRIASAPTSRSESES*NREKSC Trigger: GCATGATTTCTCTCTGTTCAAGCTTTCAGACTCCGA...CCTGGATGTTGGGGCAGATGCAATTCTAATCATAACCACAAGATGGCAGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CAA 90 bp | CTAAGCATGAACTATGGTAGAAAGCATTATTTTGTCCTGGAAGAAAGAATGGTGCACTGCGCTCTCGGTTaGGAGACTCGGAGCGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSMNYGRKHYFVLEERMVHCALG*ETRSDS Trigger: TGAATCGCTCCGAGTCTCCAAACCGAGAGCGCAGTG...CACCATTCTTTCTTCCAGGACAAAATAATGCTTTCTACCATAGTTCATGCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CAA 90 bp | CTAAGCATGAACTATGGTAGAAAGCATTATTTTGTCCTGGAAGAAAGAATGGTGCTGTGCTCCTCAAAGTaGGGCATCTCTTCTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSMNYGRKHYFVLEERMVLCSSK*GISSWG Trigger: CCCCCAAGAAGAGATGCCCAACTTTGAGGAGCACAG...CACCATTCTTTCTTCCAGGACAAAATAATGCTTTCTACCATAGTTCATGCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS-3UTR CAA 90 bp | GACAAGAATGCTTCACCACTTTATAATCAAACACTCTTCTCAAGCATCCCAGAATGTTCTGGGGCTTTCTaGTTCCTCTCATCAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: DKNASPLYNQTLFSSIPECSGAF*FLSSNL Trigger: TAAGTTTGATGAGAGGAACAAGAAAGCCCCAGAACA...TTCTGGGATGCTTGAGAAGAGTGTTTGATTATAAAGTGGTGAAGCATTCTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS GCA 72 bp | GTCCCCCTGCCGCGCACGGCCTGCACGCGGCGCGCCTaGTCCTGCTCGGCGGCCGAGCCACTGTTCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VPLPRTACTRRA*SCSAAEPLFRS Trigger: GCTGCGGAACAGTGGCTCGGCCGCCGAGCAGGAGCAGGCGCGCCGCGTGCAGGCCGTGCGCGGCAGGGGGAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 72 bp | CTGCCGCGCACGGCCTGCACGCGGCGCGCCTGCTCCTaGTCGGCGGCCGAGCCACTGTTCCGCAGCACCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LPRTACTRRACS*SAAEPLFRSTR Trigger: ACGGGTGCTGCGGAACAGTGGCTCGGCCGCCGAGCAGGAGCAGGCGCGCCGCGTGCAGGCCGTGCGCGGCAG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CCA 72 bp | CGGACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTGGTaGTGCCAAGCGCGCCCGTCCCAGGCGCACAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RTRSRKPPAAPW*CQARPSQAHSE Trigger: TTCGCTGTGCGCCTGGGACGGGCGCGCTTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGTCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 72 bp | GCGCCGGCTTGGCCCAGGAGCAGGGTGCAGAGCAGATaGGTCCCCCTGCCGCGCACGGCCTGCACGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: APAWPRSRVQSR*VPLPRTACTRR Trigger: GCGCCGCGTGCAGGCCGTGCGCGGCAGGGGGACCCATCTGCTCTGCACCCTGCTCCTGGGCCAAGCCGGCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | ACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTGGTGGTaGCAAGCGCGCCCGTCCCAGGCGCACAGCGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TRSRKPPAAPWW*QARPSQAHSEK Trigger: CTTTTCGCTGTGCGCCTGGGACGGGCGCGCTTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CAA 72 bp | GGCAGCGAGGCGTACAGCCAGCCGGCCAGCGCGGCATaGGCGCCGGCTTGGCCCAGGAGCAGGGTGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSEAYSQPASAA*APAWPRSRVQS Trigger: GCTCTGCACCCTGCTCCTGGGCCAAGCCGGCGCCAATGCCGCGCTGGCCGGCTGGCTGTACGCCTCGCTGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 72 bp | GCAGCGAGGCGTACAGCCAGCCGGCCAGCGCGGCATTaGCGCCGGCTTGGCCCAGGAGCAGGGTGCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AARRTASRPARH*RRLGPGAGCRA Trigger: TGCTCTGCACCCTGCTCCTGGGCCAAGCCGGCGCCAATGCCGCGCTGGCCGGCTGGCTGTACGCCTCGCTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | GCAGCCGCCATGAGGAGCCGGGTCAGGCACACACTGTaGGAGGCGATGGCCAACCCGTGGCGCGAGCACACC | + |
|
Preference number: 6 (lower is better) Translates to: AAAMRSRVRHTL*EAMANPWREHT Trigger: GGTGTGCTCGCGCCACGGGTTGGCCATCGCCTCGCACAGTGTGTGCCTGACCCGGCTCCTCATGGCGGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS TCA 72 bp | GGCCCAGAGGGTAGCACACCGGGAAGGCAGCCGCCATaGGGAGCCGGGTCAGGCACACACTGTGCGAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: GPEGSTPGRQPP*GAGSGTHCARR Trigger: TCGCCTCGCACAGTGTGTGCCTGACCCGGCTCCTCATGGCGGCTGCCTTCCCGGTGTGCTACCCTCTGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | ACGGACAGATCTCGGCTCCCAGGAACACGGCGCCGGTaGACACCAGCGCCGGCAGCCACGGGAAGTGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: TDRSRLPGTRRR*TPAPAATGSEP Trigger: GGGTTCACTTCCCGTGGCTGCCGGCGCTGGTGTGCACCGGCGCCGTGTTCCTGGGAGCCGAGATCTGTCCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 72 bp | GTCAGGCACACACTGTGCGAGGCGATGGCCAACCCGTaGCGCGAGCACACCGAGTACGGACAGATCTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VRHTLCEAMANP*REHTEYGQISA Trigger: AGCCGAGATCTGTCCGTACTCGGTGTGCTCGCGCCACGGGTTGGCCATCGCCTCGCACAGTGTGTGCCTGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS TCA 72 bp | GCGTCTCCAGCAGCTTTTCCCTCGTGTAGAAGGTGCTaGTCTCCTGGCGCAGAGCCCAGTCCAGGAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASPAAFPSCRRC*SPGAEPSPGGG Trigger: GCCGCCTCCTGGACTGGGCTCTGCGCCAGGAGATCAGCACCTTCTACACGAGGGAAAAGCTGCTGGAGACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS TCA 72 bp | GGCTGCATGGCAAGCTGGTCCTGTTGCTCAGGAGGGTaGGGACCGGGTCGTCCTTTGGAGTCTGGGGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GCMASWSCCSGG*GPGRPLESGVC Trigger: GCACACCCCAGACTCCAAAGGACGACCCGGTCCTCACCCTCCTGAGCAACAGGACCAGCTTGCCATGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 72 bp | CTCGCCTGGGCTTCTCAGACCATCCGAGCGGCTGCATaGCAAGCTGGTCCTGTTGCTCAGGAGGGTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LAWASQTIRAAA*QAGPVAQEGED Trigger: GTCCTCACCCTCCTGAGCAACAGGACCAGCTTGCCATGCAGCCGCTCGGATGGTCTGAGAAGCCCAGGCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CAA 90 bp | GGGCTTCTCAGACCATCCGAGCGGCTGCATGGCAAGCTGGTCCTGTaGCTCAGGAGGGTGAGGACCGGGTCGTCCTTTGGAGTCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLLRPSERLHGKLVL*LRRVRTGSSFGVWG Trigger: ACCCCAGACTCCAAAGGACGACCCGGTCCTCACCCTCCTGAGCAACAGGACCAGCTTGCCATGCAGCCGCTCGGATGGTCTGAGAAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | GCTCTCGGTTTGGAGACTCGGAGCGATTCAACCCGCTaGAGCGAGAAGGGGACCGGTTTACTGGGGAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALGLETRSDSTR*SEKGTGLLGSL Trigger: CAGGCTCCCCAGTAAACCGGTCCCCTTCTCGCTGCAGCGGGTTGAATCGCTCCGAGTCTCCAAACCGAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223787.2 |
||
| CDS CCA 72 bp | GAGTCCCCATCAGTGAAGGCTTCCATATCCGGGGACTaGGGTGAGCTGTCCATGTGGCAGGCCGTGAGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: ESPSVKASISGD*GELSMWQAVSA Trigger: CGCACTCACGGCCTGCCACATGGACAGCTCACCCCAGTCCCCGGATATGGAAGCCTTCACTGATGGGGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CAA 72 bp | GCGTGTTGCTTCCGCCGAAGTCACTGCGCTCTCGGTTaGGAGACTCGGAGCGATTCAACCCGCTGCAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ACCFRRSHCALG*ETRSDSTRCSE Trigger: CTCGCTGCAGCGGGTTGAATCGCTCCGAGTCTCCAAACCGAGAGCGCAGTGACTTCGGCGGAAGCAACACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 72 bp | CGTGTTGCTTCCGCCGAAGTCACTGCGCTCTCGGTTTaGAGACTCGGAGCGATTCAACCCGCTGCAGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVASAEVTALSV*RLGAIQPAAAR Trigger: TCTCGCTGCAGCGGGTTGAATCGCTCCGAGTCTCCAAACCGAGAGCGCAGTGACTTCGGCGGAAGCAACACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 72 bp | GGCCATCTCCTCCATCCTCAGGTACACAACCTCGCCTaGGCTTCTCAGACCATCCGAGCGGCTGCATGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GHLLHPQVHNLA*ASQTIRAAAWQ Trigger: TTGCCATGCAGCCGCTCGGATGGTCTGAGAAGCCCAGGCGAGGTTGTGTACCTGAGGATGGAGGAGATGGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CAA 90 bp | TGTACAGTTGCGTGTTGCTTCCGCCGAAGTCACTGCGCTCTCGGTTaGGAGACTCGGAGCGATTCAACCCGCTGCAGCGAGAAGGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: CTVACCFRRSHCALG*ETRSDSTRCSEKGT Trigger: GGTCCCCTTCTCGCTGCAGCGGGTTGAATCGCTCCGAGTCTCCAAACCGAGAGCGCAGTGACTTCGGCGGAAGCAACACGCAACTGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | GCTCTCGGTTTGGAGACTCGGAGCGATTCAACCCGCTaGAGCGAGAAGGGGACCGGTTTAGGAAGACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALGLETRSDSTR*SEKGTGLGRQR Trigger: CCTCTGTCTTCCTAAACCGGTCCCCTTCTCGCTGCAGCGGGTTGAATCGCTCCGAGTCTCCAAACCGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165311.3 |
||
| CDS CAA 90 bp | GCGACAGGGGACAGCGAGACTTGCTGTGACCTGTGCTCCTCAAAGTaGGGCATCTCTTCTTGGGGGAAGGCCATCTCCTCCATCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ATGDSETCCDLCSSK*GISSWGKAISSILR Trigger: CCTGAGGATGGAGGAGATGGCCTTCCCCCAAGAAGAGATGCCCAACTTTGAGGAGCACAGGTCACAGCAAGTCTCGCTGTCCCCTGTCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS TCA 72 bp | TCCTCTACCACCTTGGTGCGCAGCTCCAGGGCTCCCTaGATGATGTTGAGCTCTTCCTTCACCAGGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSTTLVRSSRAP*MMLSSSFTRSL Trigger: CAGCGACCTGGTGAAGGAAGAGCTCAACATCATTCAGGGAGCCCTGGAGCTGCGCACCAAGGTGGTAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 72 bp | CAATGTTGTGCCTCTGGTCGCCCTCATACACCGGGATaGGAGTGTAGCCACTACGGAGGATCTCGGATACAG | + |
|
Preference number: 6 (lower is better) Translates to: QCCASGRPHTPG*ECSHYGGSRIQ Trigger: CTGTATCCGAGATCCTCCGTAGTGGCTACACTCGCATCCCGGTGTATGAGGGCGACCAGAGGCACAACATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS GCA 72 bp | TGCTGTACAGTTGCGTGTTGCTTCCGCCGAAGTCACTaGGCTCTCGGTTTGGAGACTCGGAGCGATTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: CCTVACCFRRSH*ALGLETRSDST Trigger: GGTTGAATCGCTCCGAGTCTCCAAACCGAGAGCGCAGTGACTTCGGCGGAAGCAACACGCAACTGTACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CAA 72 bp | GTCAGGTGTGTAGAGGTTGTTGCTGCTGCTGTACAGTaGCGTGTTGCTTCCGCCGAAGTCACTGCGCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VRCVEVVAAAVQ*RVASAEVTALS Trigger: CGAGAGCGCAGTGACTTCGGCGGAAGCAACACGCAACTGTACAGCAGCAGCAACAACCTCTACACACCTGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CAA 72 bp | GACAGCGAGACTTGCTGTGACCTGTGCTCCTCAAAGTaGGGCATCTCTTCTTGGGGGAAGGCCATCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSETCCDLCSSK*GISSWGKAISS Trigger: GGAGGAGATGGCCTTCCCCCAAGAAGAGATGCCCAACTTTGAGGAGCACAGGTCACAGCAAGTCTCGCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
||
| CDS CAA 90 bp | CACCGAGTAGTCAGGTGTGTAGAGGTTGTTGCTGCTGCTGTACAGTaGCGTGTTGCTTCCGCCGAAGTCACTGCGCTCTCGGTTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HRVVRCVEVVAAAVQ*RVASAEVTALSVWR Trigger: TCTCCAAACCGAGAGCGCAGTGACTTCGGCGGAAGCAACACGCAACTGTACAGCAGCAGCAACAACCTCTACACACCTGACTACTCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | TGTAGAGGTTGTTGCTGCTGCTGTACAGTTGCGTGTTaGTTCCGCCGAAGTCACTGCGCTCTCGGTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: CRGCCCCCTVAC*FRRSHCALGLE Trigger: CTCCAAACCGAGAGCGCAGTGACTTCGGCGGAAGCAACACGCAACTGTACAGCAGCAGCAACAACCTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | GCACCGAGTAGTCAGGTGTGTAGAGGTTGTTGCTGCTaGTGTACAGTTGCGTGTTGCTTCCGCCGAAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: APSSQVCRGCCC*CTVACCFRRSH Trigger: GTGACTTCGGCGGAAGCAACACGCAACTGTACAGCAGCAGCAACAACCTCTACACACCTGACTACTCGGTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | GCTGTTGTAGGAACTGCGACAGGGGACAGCGAGACTTaGTGTGACCTGTGCTCCTCAAAGTTGGGCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: AVVGTATGDSET*CDLCSSKLGIS Trigger: AGAGATGCCCAACTTTGAGGAGCACAGGTCACAGCAAGTCTCGCTGTCCCCTGTCGCAGTTCCTACAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 72 bp | GGTGAGCTGTCCATGTGGCAGGCCGTGAGTGCGTTCTaGTACTGTTGTCGTGTGATCTTCACGAACTGCACA | + |
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Preference number: 6 (lower is better) Translates to: GELSMWQAVSAF*YCCRVIFTNCT Trigger: TGTGCAGTTCGTGAAGATCACACGACAACAGTACCAGAACGCACTCACGGCCTGCCACATGGACAGCTCACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 72 bp | TGCCCATGTTTTCCTCAGAGTCGCTGCTGCAGGGGCTaGCCTCTGGATCCAGGTGGATATTACAGCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: CPCFPQSRCCRG*PLDPGGYYSIQ Trigger: CTGAATGCTGTAATATCCACCTGGATCCAGAGGCCAGCCCCTGCAGCAGCGACTCTGAGGAAAACATGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | TGTGCACCGAGTAGTCAGGTGTGTAGAGGTTGTTGCTaGTGCTGTACAGTTGCGTGTTGCTTCCGCCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: CAPSSQVCRGCC*CCTVACCFRRS Trigger: ACTTCGGCGGAAGCAACACGCAACTGTACAGCAGCAGCAACAACCTCTACACACCTGACTACTCGGTGCACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | GAATGTGCACCGAGTAGTCAGGTGTGTAGAGGTTGTTaGTGCTGCTGTACAGTTGCGTGTTGCTTCCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: ECAPSSQVCRGC*CCCTVACCFRR Trigger: TCGGCGGAAGCAACACGCAACTGTACAGCAGCAGCAACAACCTCTACACACCTGACTACTCGGTGCACATTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CCA 72 bp | TGTGACCTGTGCTCCTCAAAGTTGGGCATCTCTTCTTaGGGGAAGGCCATCTCCTCCATCCTCAGGTACACA | + |
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Preference number: 6 (lower is better) Translates to: CDLCSSKLGISS*GKAISSILRYT Trigger: TGTGTACCTGAGGATGGAGGAGATGGCCTTCCCCCAAGAAGAGATGCCCAACTTTGAGGAGCACAGGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CAA 72 bp | GTCCATGTGGCAGGCCGTGAGTGCGTTCTGGTACTGTaGTCGTGTGATCTTCACGAACTGCACATCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: VHVAGRECVLVL*SCDLHELHITE Trigger: CTCAGTGATGTGCAGTTCGTGAAGATCACACGACAACAGTACCAGAACGCACTCACGGCCTGCCACATGGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS GCA 72 bp | ATCTCGGAGTCTGAAAGCTTGAACAGAGAGAAATCATaGCGCCTTCTCTCCCGGTGTGGGACCCTCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ISESESLNREKS*RLLSRCGTLCF Trigger: AAAGCAGAGGGTCCCACACCGGGAGAGAAGGCGGCATGATTTCTCTCTGTTCAAGCTTTCAGACTCCGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CAA 72 bp | AAGCGGTGTGTGGCAAGCAGCAGCTGTGGCGAGATCTaGACTCTGATCTCGGAGTCTGAAAGCTTGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: KRCVASSSCGEI*TLISESESLNR Trigger: TCTGTTCAAGCTTTCAGACTCCGAGATCAGAGTCAAGATCTCGCCACAGCTGCTGCTTGCCACACACCGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS CAA 90 bp | GTGGCCATGAAGCGGTGTGTGGCAAGCAGCAGCTGTGGCGAGATCTaGACTCTGATCTCGGAGTCTGAAAGCTTGAACAGAGAGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: VAMKRCVASSSCGEI*TLISESESLNREKS Trigger: TGATTTCTCTCTGTTCAAGCTTTCAGACTCCGAGATCAGAGTCAAGATCTCGCCACAGCTGCTGCTTGCCACACACCGCTTCATGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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| CDS TCA 72 bp | CAGCTGTGGCGAGATCTTGACTCTGATCTCGGAGTCTaGAAGCTTGAACAGAGAGAAATCATGCCGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: QLWRDLDSDLGV*KLEQREIMPPS Trigger: AGAAGGCGGCATGATTTCTCTCTGTTCAAGCTTTCAGACTCCGAGATCAGAGTCAAGATCTCGCCACAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165311.3 ENSMUST00000223787.2 |
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