Pregenerated sensors for CNN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053931Ensembl transcript IDs: ENSMUST00000029773.13, ENSMUST00000197135.5, ENSMUST00000198620.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCATGGTACAGACGCGAGTTACTGGCTATGCAGTAGGGCTCCCTTaGTACAGCACTAGAAGGCAGCTATTTAGGGAGGAGGCAGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SMVQTRVTGYAVGLP*YSTRRQLFREEAGK Trigger: TTTTCCTGCCTCCTCCCTAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGCATAGCCAGTAACTCGCGTCTGTACCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| 3UTR-3UTR GCA 90 bp | ATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTGCAGTAGGGCTCCCTTaGTACAGCACTAGAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: IDRSSTKELAVLENRSALAVGLP*YSTRRQ Trigger: CTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGC...AAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| 3UTR-3UTR CCA 90 bp | TATTTAAAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAGTTCCGCCCTTTCCATaGTACAGACGCGAGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: YLKLSRQDCRRTSTCQGLVPPFP*YRRELL Trigger: CAGTAACTCGCGTCTGTACCATGGAAAGGGCGGAAC...TAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000198620.2 |
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| 3UTR-3UTR CCA 90 bp | AATGAAGTCTGCAGGCACACCACCCAAACCTGCATGTCCTCGGCCATTTCTGCAATCTCAGATTTTAGTTaGCAAAGACCACATTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: NEVCRHTTQTCMSSAISAISDFS*QRPHLA Trigger: TGCTAAATGTGGTCTTTGCCAACTAAAATCTGAGAT...TGCAGAAATGGCCGAGGACATGCAGGTTTGGGTGGTGTGCCTGCAGACTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| 3UTR-3UTR CCA 90 bp | ATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTATTCAAGGCTAGCTTaGGTCTCACTGGATAAAACA | + |
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Preference number: 2 (lower is better) Translates to: IDRSSTKELAVLENRSALYSRLA*VSLDKT Trigger: TGTTTTATCCAGTGAGACCCAAGCTAGCCTTGAATA...AAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| 3UTR-3UTR CCA 90 bp | AAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGTATTCAAGGCTAGCTTaGGTCTCACTGGATAAAACA | + |
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Preference number: 2 (lower is better) Translates to: KLSRQDCRRTSTCQGLKLYSRLA*VSLDKT Trigger: TGTTTTATCCAGTGAGACCCAAGCTAGCCTTGAATA...CAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| 3UTR GCA 72 bp | GGCACAAATGAAGTCTGCAGGCACACCACCCAAACCTaGATGTCCTCGGCCATTTCTGCATGCACGCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: GTNEVCRHTTQT*MSSAISACTPF Trigger: GAAAGGCGTGCATGCAGAAATGGCCGAGGACATGCAGGTTTGGGTGGTGTGCCTGCAGACTTCATTTGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| 3UTR GCA 72 bp | CAGACGCGAGTTACTGGCTATGCAGTAGGGCTCCCTTaGTACAGCACTAGAAGGCAGCTATTTAGGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QTRVTGYAVGLP*YSTRRQLFREE Trigger: CTCCTCCCTAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGCATAGCCAGTAACTCGCGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| 3UTR TCA 72 bp | AAACAGAGCGACTCTACAGTAATACATTGGCACAAATaGAGTCTGCAGGCACACCACCCAAACCTGCATGTC | + |
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Preference number: 3 (lower is better) Translates to: KQSDSTVIHWHK*SLQAHHPNLHV Trigger: GACATGCAGGTTTGGGTGGTGTGCCTGCAGACTTCATTTGTGCCAATGTATTACTGTAGAGTCGCTCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR GCA 90 bp | GCAGTAGGGCTCCCTTGCTACAGCACTAGAAGGCAGCTATTTAGGGAGGAGGCATTTCCGACCCATTGGTaGCCGTGCCCTGGCTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: AVGLPCYSTRRQLFREEAFPTHW*PCPGFR Trigger: ACGGAAGCCAGGGCACGGGCACCAATGGGTCGGAAA...TGCCTCCTCCCTAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | GATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTCCATGGGACAGGTTCTGTGGGTaGGGCACAGTACTTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLQRKSWLSWRIVPPFPWDRFCG*GTVLGV Trigger: GACCCCAAGTACTGTGCCGCACCCACAGAACCTGTC...CCATGGAAAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CCA 90 bp | ATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTCCAGCCCCAGCTGGAAGTTaGTGCCAATGCCTAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDLQRKSWLSWRIVPPFPAPAGS*CQCLGL Trigger: CAGGCCTAGGCATTGGCACCAACTTCCAGCTGGGGC...TGGAAAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR TCA 90 bp | CAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGCATCTCAGGGCTTCCGTTGTGAATaGCAGGTTCTGTGGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: QTRLQKNIHVSGSKAASQGFRCE*QVLWVR Trigger: CCGCACCCACAGAACCTGTCATTCACAACGGAAGCC...CTGAGATGCAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR GCA 90 bp | ATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTCCAACCCATTGGTGCCCGTaGCCTGGCTTCCGTTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: IDLQRKSWLSWRIVPPFPTHWCP*PGFRCE Trigger: TTCACAACGGAAGCCAGGGCACGGGCACCAATGGGT...TGGAAAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CCA 90 bp | ATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTCCAGCTAACATCCCAGCCTaGCTGGCCCCTTTGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: IDLQRKSWLSWRIVPPFPANIPA*LAPLLV Trigger: CACCAACAAAGGGGCCAGCCAGGCTGGGATGTTAGC...TGGAAAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CCA 90 bp | AATGAAGTCTGCAGGCACACCACCCAAACCTGCATGTCCTCGGCCATTTCTGCACCGAGGGTAGTCGTCTaGGTACTCGCCATGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: NEVCRHTTQTCMSSAISAPRVVV*VLAMIF Trigger: GAATATCATGGCGAGTACCCAGACGACTACCCTCGG...TGCAGAAATGGCCGAGGACATGCAGGTTTGGGTGGTGTGCCTGCAGACTTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CCA 90 bp | GATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTCCATGGCCGAGGGTAGTCGTCTaGGTACTCGCCATGATATTC | + |
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Preference number: 4 (lower is better) Translates to: DLQRKSWLSWRIVPPFPWPRVVV*VLAMIF Trigger: GAATATCATGGCGAGTACCCAGACGACTACCCTCGG...CCATGGAAAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | TGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCCAGCTGGAAGTTGGTaGCAATGCCTAGGCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CIDRSSTKELAVLENRSAPAGSW*QCLGLS Trigger: TGACAGGCCTAGGCATTGGCACCAACTTCCAGCTGG...GGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | ATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTACCCATTGGTGCCCGTaGCCTGGCTTCCGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IDRSSTKELAVLENRSALTHWCP*PGFRCE Trigger: TTCACAACGGAAGCCAGGGCACGGGCACCAATGGGT...AAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR TCA 90 bp | GCAGTAGGGCTCCCTTGCTACAGCACTAGAAGGCAGCTATTTAGGGAGGAGGCATTAGTGAGGATTCGTTaGCTTTCTTCACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVGLPCYSTRRQLFREEALVRIR*LSSQSL Trigger: CAGGCTCTGTGAAGAAAGTCAACGAATCCTCACTAA...TGCCTCCTCCCTAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | GATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTCCATGGGAACCTGGGTCATGTTaGCATTCTCAAAGAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: DLQRKSWLSWRIVPPFPWEPGSC*HSQRGR Trigger: ACGACCTCTTTGAGAATGGCAACATGACCCAGGTTC...CCATGGAAAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CCA 90 bp | AAATGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCCAGCTGGAAGTTaGTGCCAATGCCTAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KCIDRSSTKELAVLENRSAPAGS*CQCLGL Trigger: CAGGCCTAGGCATTGGCACCAACTTCCAGCTGGGGC...GGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CCA 90 bp | ACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGCATCTCAGATTGCTAACATCCCAGCCTaGCTGGCCCCTTTGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TRLQKNIHVSGSKAASQIANIPA*LAPLLV Trigger: CACCAACAAAGGGGCCAGCCAGGCTGGGATGTTAGC...AATCTGAGATGCAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR TCA 90 bp | AATGAAGTCTGCAGGCACACCACCCAAACCTGCATGTCCTCGGCCATTTCTGCATTAGTGAGGATTCGTTaGCTTTCTTCACAGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NEVCRHTTQTCMSSAISALVRIR*LSSQSL Trigger: CAGGCTCTGTGAAGAAAGTCAACGAATCCTCACTAA...TGCAGAAATGGCCGAGGACATGCAGGTTTGGGTGGTGTGCCTGCAGACTTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR TCA 90 bp | AAATGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGGCTTCCGTTGTGAATaGCAGGTTCTGTGGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: KCIDRSSTKELAVLENRSGFRCE*QVLWVR Trigger: CCGCACCCACAGAACCTGTCATTCACAACGGAAGCC...GGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | GCAGTAGGGCTCCCTTGCTACAGCACTAGAAGGCAGCTATTTAGGGAGGAGGCAGGCCAGCCTTTAATTTaGCTTCATCAAAACGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AVGLPCYSTRRQLFREEAGQPLI*LHQNVL Trigger: CAAGACGTTTTGATGAAGGCAAATTAAAGGCTGGCC...TGCCTCCTCCCTAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | ATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTTGTTGGTGCCCATCTaGAGGCTAATCGTGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: IDRSSTKELAVLENRSALLLVPI*RLIVVW Trigger: CCAGACCACGATTAGCCTGCAGATGGGCACCAACAA...AAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | AACATCCACGTGTCAGGGTCTAAAGCTGCATCTCAGATTTTAGTTGGCAAAGACGACAGGTTCTGTGGGTaGGGCACAGTACTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: NIHVSGSKAASQILVGKDDRFCG*GTVLGV Trigger: GACCCCAAGTACTGTGCCGCACCCACAGAACCTGTC...GTCTTTGCCAACTAAAATCTGAGATGCAGCTTTAGACCCTGACACGTGGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CCA 90 bp | TGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCTCTTCCTCGGCCTGCTaGTCATACTTGGATGCAATC | + |
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Preference number: 4 (lower is better) Translates to: CIDRSSTKELAVLENRSASSSAC*SYLDAI Trigger: GATTGCATCCAAGTATGACCAGCAGGCCGAGGAAGA...GGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CCA 90 bp | AAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGGTGCGGCACAGTACTTaGGGTCATATACTTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: KLSRQDCRRTSTCQGLKLVRHST*GHILAA Trigger: GGCGGCAAGTATATGACCCCAAGTACTGTGCCGCAC...CAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR TCA 90 bp | TATTTAAAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAGCCACCAGCGTCGTCTaGACCTGGGTCATGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: YLKLSRQDCRRTSTCQGLATSVV*TWVMLP Trigger: TGGCAACATGACCCAGGTTCAGACGACGCTGGTGGC...TAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR GCA 90 bp | ATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTAGATCTTCCTCGGCCTaGTGGTCATACTTGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: IDRSSTKELAVLENRSALRSSSA*WSYLDA Trigger: TGCATCCAAGTATGACCAGCAGGCCGAGGAAGATCT...AAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | GATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTCCATGGGGCCAGCCTTTAATTTaGCTTCATCAAAACGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: DLQRKSWLSWRIVPPFPWGQPLI*LHQNVL Trigger: CAAGACGTTTTGATGAAGGCAAATTAAAGGCTGGCC...CCATGGAAAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | CTTTATTTAAAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTTTTCCGACCCATTGGTaGCCGTGCCCTGGCTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: LYLKLSRQDCRRTSTCQGFPTHW*PCPGFR Trigger: ACGGAAGCCAGGGCACGGGCACCAATGGGTCGGAAA...ACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAAATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CCA 90 bp | AAATGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGTGCGGCACAGTACTTaGGGTCATATACTTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: KCIDRSSTKELAVLENRSVRHST*GHILAA Trigger: GGCGGCAAGTATATGACCCCAAGTACTGTGCCGCAC...GGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | AGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGCATCTCAGATTTTATTGTTGGTGCCCATCTaGAGGCTAATCGTGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RLQKNIHVSGSKAASQILLLVPI*RLIVVW Trigger: CCAGACCACGATTAGCCTGCAGATGGGCACCAACAA...TAAAATCTGAGATGCAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR GCA 90 bp | AGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGCATCTCAGATTTTATTGGGGTCATATACTTaGCGCCCAAGCCCATACACG | + |
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Preference number: 4 (lower is better) Translates to: RLQKNIHVSGSKAASQILLGSYT*RPSPYT Trigger: CGTGTATGGGCTTGGGCGGCAAGTATATGACCCCAA...TAAAATCTGAGATGCAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR GCA 90 bp | AAATGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCTTGGGGTCATATACTTaGCGCCCAAGCCCATACACG | + |
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Preference number: 4 (lower is better) Translates to: KCIDRSSTKELAVLENRSLGSYT*RPSPYT Trigger: CGTGTATGGGCTTGGGCGGCAAGTATATGACCCCAA...GGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CCA 90 bp | AAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGTCTTCCTCGGCCTGCTaGTCATACTTGGATGCAATC | + |
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Preference number: 4 (lower is better) Translates to: KLSRQDCRRTSTCQGLKLSSSAC*SYLDAI Trigger: GATTGCATCCAAGTATGACCAGCAGGCCGAGGAAGA...CAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR GCA 90 bp | GATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTCCATGGCTGGTCATACTTGGATaGAATCTTGTTCTTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: DLQRKSWLSWRIVPPFPWLVILG*NLVLNF Trigger: GAAGTTAAGAACAAGATTGCATCCAAGTATGACCAG...CCATGGAAAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR GCA 90 bp | AACATCCACGTGTCAGGGTCTAAAGCTGCATCTCAGATTTTAGTTGGCAAAGACAGATCTTCCTCGGCCTaGTGGTCATACTTGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: NIHVSGSKAASQILVGKDRSSSA*WSYLDA Trigger: TGCATCCAAGTATGACCAGCAGGCCGAGGAAGATCT...GTCTTTGCCAACTAAAATCTGAGATGCAGCTTTAGACCCTGACACGTGGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR GCA 90 bp | TATTTAAAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTACCAGCTGGAAGTTGGTaGCAATGCCTAGGCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: YLKLSRQDCRRTSTCQGLPAGSW*QCLGLS Trigger: TGACAGGCCTAGGCATTGGCACCAACTTCCAGCTGG...TAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR GCA 90 bp | TATTTAAAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAGGAAGTTGGTGCCAATaGCTAGGCCTGTCACCTCTT | + |
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Preference number: 4 (lower is better) Translates to: YLKLSRQDCRRTSTCQGLGSWCQ*LGLSPL Trigger: AAGAGGTGACAGGCCTAGGCATTGGCACCAACTTCC...TAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR GCA 90 bp | ATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTCTGGTCATACTTGGATaGAATCTTGTTCTTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: IDRSSTKELAVLENRSALLVILG*NLVLNF Trigger: GAAGTTAAGAACAAGATTGCATCCAAGTATGACCAG...AAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CCA 90 bp | TATTTAAAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTACCGATATTCTCCAACTaGGGCCAATTTAGTGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: YLKLSRQDCRRTSTCQGLPIFSN*GQFSED Trigger: ATCCTCACTAAATTGGCCCCAGTTGGAGAATATCGG...TAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CCA 90 bp | AAATGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCAAACCAATTACACTCTaGCCAGCCTTTAATTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KCIDRSSTKELAVLENRSKPITL*PAFNLP Trigger: AGGCAAATTAAAGGCTGGCCAGAGTGTAATTGGTTT...GGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CCA 90 bp | TTAAAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGAAACCAATTACACTCTaGCCAGCCTTTAATTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LKLSRQDCRRTSTCQGLKKPITL*PAFNLP Trigger: AGGCAAATTAAAGGCTGGCCAGAGTGTAATTGGTTT...CTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CAA 90 bp | GCAGTAGGGCTCCCTTGCTACAGCACTAGAAGGCAGCTATTTAGGGAGGAGGCAAGCCCCAGCTGGAAGTaGGTGCCAATGCCTAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: AVGLPCYSTRRQLFREEASPSWK*VPMPRP Trigger: AGGCCTAGGCATTGGCACCAACTTCCAGCTGGGGCT...TGCCTCCTCCCTAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CAA 90 bp | GCAGTAGGGCTCCCTTGCTACAGCACTAGAAGGCAGCTATTTAGGGAGGAGGCAGGTGCGGCACAGTACTaGGGGTCATATACTTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: AVGLPCYSTRRQLFREEAGAAQY*GSYTCR Trigger: GCGGCAAGTATATGACCCCAAGTACTGTGCCGCACC...TGCCTCCTCCCTAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS TCA 90 bp | TCACTGATTTCCGACCCATTGGTGCCCGTGCCCTGGCTTCCGTTGTaGATGACAGGTTCTGTGGGTGCGGCACAGTACTTGGGGTCATAT | + |
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Preference number: 5 (lower is better) Translates to: SLISDPLVPVPWLPL*MTGSVGAAQYLGSY Trigger: ATATGACCCCAAGTACTGTGCCGCACCCACAGAACCTGTCATTCACAACGGAAGCCAGGGCACGGGCACCAATGGGTCGGAAATCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CAA 90 bp | GCAGTAGGGCTCCCTTGCTACAGCACTAGAAGGCAGCTATTTAGGGAGGAGGCAACCTCTTCTATCCAGTaGCGCAGATCTTCCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: AVGLPCYSTRRQLFREEATSSIQ*RRSSSA Trigger: GGCCGAGGAAGATCTGCGCAACTGGATAGAAGAGGT...TGCCTCCTCCCTAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CAA 90 bp | TGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCGGTGCGGCACAGTACTaGGGGTCATATACTTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: CIDRSSTKELAVLENRSAGAAQY*GSYTCR Trigger: GCGGCAAGTATATGACCCCAAGTACTGTGCCGCACC...GGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS TCA 90 bp | CGCCATGATATTCATCGGGGTATTCTGCCTGATAATCGCTATCACTaGTTTCCGACCCATTGGTGCCCGTGCCCTGGCTTCCGTTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: RHDIHRGILPDNRYH*FPTHWCPCPGFRCE Trigger: TTCACAACGGAAGCCAGGGCACGGGCACCAATGGGTCGGAAATCAGTGATAGCGATTATCAGGCAGAATACCCCGATGAATATCATGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CAA 90 bp | ACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGCATCTCAGATTAGCCCCAGCTGGAAGTaGGTGCCAATGCCTAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: TRLQKNIHVSGSKAASQISPSWK*VPMPRP Trigger: AGGCCTAGGCATTGGCACCAACTTCCAGCTGGGGCT...AATCTGAGATGCAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CAA 90 bp | ATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTCTTGGGGTCATATACTaGCCGCCCAAGCCCATACAC | + |
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Preference number: 5 (lower is better) Translates to: IDRSSTKELAVLENRSALLGVIY*PPKPIH Trigger: GTGTATGGGCTTGGGCGGCAAGTATATGACCCCAAG...AAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CAA 90 bp | ACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGCATCTCAGATTACCTCTTCTATCCAGTaGCGCAGATCTTCCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: TRLQKNIHVSGSKAASQITSSIQ*RRSSSA Trigger: GGCCGAGGAAGATCTGCGCAACTGGATAGAAGAGGT...AATCTGAGATGCAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CAA 90 bp | GCAGTAGGGCTCCCTTGCTACAGCACTAGAAGGCAGCTATTTAGGGAGGAGGCATGGCCAGCCTTTAATTaGCCTTCATCAAAACGTCTT | + |
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Preference number: 5 (lower is better) Translates to: AVGLPCYSTRRQLFREEAWPAFN*PSSKRL Trigger: AAGACGTTTTGATGAAGGCAAATTAAAGGCTGGCCA...TGCCTCCTCCCTAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CAA 90 bp | ACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCTGCATCTCAGATTCTTGGGGTCATATACTaGCCGCCCAAGCCCATACAC | + |
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Preference number: 5 (lower is better) Translates to: TRLQKNIHVSGSKAASQILGVIY*PPKPIH Trigger: GTGTATGGGCTTGGGCGGCAAGTATATGACCCCAAG...AATCTGAGATGCAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CAA 90 bp | GATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCCTTTCCATGGTTGTATGGAATCCTTTaGTTTTCGCCTGGGGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: DLQRKSWLSWRIVPPFPWLYGIL*FSPGAN Trigger: ATTGGCCCCAGGCGAAAACAAAAGGATTCCATACAA...CCATGGAAAGGGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197135.5 |
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| CDS GCA 90 bp | CGTCGTCTGAACCTGGGTCATGTTGCCATTCTCAAAGAGGTCGTTTaGTTCAAATATATCATGGGGCTTCATACCGTAAGCCTGGATAGC | + |
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Preference number: 5 (lower is better) Translates to: RRLNLGHVAILKEVV*FKYIMGLHTVSLDS Trigger: GCTATCCAGGCTTACGGTATGAAGCCCCATGATATATTTGAAGCAAACGACCTCTTTGAGAATGGCAACATGACCCAGGTTCAGACGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CAA 90 bp | TGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCGCCTGGCCAGCCTTTAATTaGCCTTCATCAAAACGTCTT | + |
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Preference number: 5 (lower is better) Translates to: CIDRSSTKELAVLENRSAWPAFN*PSSKRL Trigger: AAGACGTTTTGATGAAGGCAAATTAAAGGCTGGCCA...GGCGGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CAA 90 bp | AAATGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCTTTAGTGAGGATTCGTaGACTTTCTTCACAGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: KCIDRSSTKELAVLENRSFSEDS*TFFTEP Trigger: AGGCTCTGTGAAGAAAGTCAACGAATCCTCACTAAA...GGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CAA 90 bp | AAATGCATAGATAGATCTTCAACGAAAGAGCTGGCTGTCCTGGAGAATCGTTCCCGCCAATGTCAATGGTaGTATGGAATCCTTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: KCIDRSSTKELAVLENRSRQCQW*YGILLF Trigger: AAACAAAAGGATTCCATACAACCATTGACATTGGCG...GGAACGATTCTCCAGGACAGCCAGCTCTTTCGTTGAAGATCTATCTATGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS-3UTR CAA 90 bp | TATTTAAAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTATTGTATGGAATCCTTTaGTTTTCGCCAGACCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: YLKLSRQDCRRTSTCQGLLYGIL*FSPDLL Trigger: TAGCAGGTCTGGCGAAAACAAAAGGATTCCATACAA...TAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS-3UTR CAA 90 bp | TTAAAACTTAGCAGACAAGACTGCAGAAGAACATCCACGTGTCAGGGTCTAAAGCGCCAATGTCAATGGTaGTATGGAATCCTTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LKLSRQDCRRTSTCQGLKRQCQW*YGILLF Trigger: AAACAAAAGGATTCCATACAACCATTGACATTGGCG...CTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS TCA 72 bp | ACCCATTGGTGCCCGTGCCCTGGCTTCCGTTGTGAATaGCAGGTTCTGTGGGTGCGGCACAGTACTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: THWCPCPGFRCE*QVLWVRHSTWG Trigger: ACCCCAAGTACTGTGCCGCACCCACAGAACCTGTCATTCACAACGGAAGCCAGGGCACGGGCACCAATGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS TCA 72 bp | ATTCATCGGGGTATTCTGCCTGATAATCGCTATCACTaGTTTCCGACCCATTGGTGCCCGTGCCCTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: IHRGILPDNRYH*FPTHWCPCPGF Trigger: GAAGCCAGGGCACGGGCACCAATGGGTCGGAAATCAGTGATAGCGATTATCAGGCAGAATACCCCGATGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029773.13 ENSMUST00000197135.5 |
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| CDS GCA 72 bp | AACCTGGGTCATGTTGCCATTCTCAAAGAGGTCGTTTaGTTCAAATATATCATGGGGCTTCATACCGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: NLGHVAILKEVV*FKYIMGLHTVS Trigger: GCTTACGGTATGAAGCCCCATGATATATTTGAAGCAAACGACCTCTTTGAGAATGGCAACATGACCCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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| CDS CAA 72 bp | GAACCTGGGTCATGTTGCCATTCTCAAAGAGGTCGTTaGCTTCAAATATATCATGGGGCTTCATACCGTAAG | + |
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Preference number: 6 (lower is better) Translates to: EPGSCCHSQRGR*LQIYHGASYRK Trigger: CTTACGGTATGAAGCCCCATGATATATTTGAAGCAAACGACCTCTTTGAGAATGGCAACATGACCCAGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029773.13 |
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