Pregenerated sensors for CNN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001349Ensembl transcript IDs: ENSMUST00000001384.6, ENSMUST00000213607.2, ENSMUST00000214601.2, ENSMUST00000216872.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGCAGTACTTaGGATCGTACACCTGGCGAGGAAGCCCATACACTGTCATGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GWAHSALGTPGSGST*DRTPGEEAHTLSCP Trigger: GGGGCATGACAGTGTATGGGCTTCCTCGCCAGGTGTACGATCCCAAGTACTGCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR CCA 90 bp | CTGCAAGCTGACGTTGAGTGTGTCGCAGTGTTCCATGCCCAGACCTaGCTCAAAGATCTGCCGCTTGGTGCCTGGTGCAGTCATGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LQADVECVAVFHAQT*LKDLPLGAWCSHAS Trigger: GCTGGCATGACTGCACCAGGCACCAAGCGGCAGATCTTTGAGCCAGGTCTGGGCATGGAACACTGCGACACACTCAACGTCAGCTTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR CCA 90 bp | GTAGTAGTTGTGCGGGTGGTGATTGTGGGTGGGCTCACTCAGCTCTaGGTACTCCGGGTTCAGGCAGTACTTGGGATCGTACACCTGGCG | + |
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Preference number: 1 (lower is better) Translates to: VVVVRVVIVGGLTQL*VLRVQAVLGIVHLA Trigger: CGCCAGGTGTACGATCCCAAGTACTGCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCGCACAACTACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR CCA 90 bp | GCCCCTAGGCAGAGTTGTAGTAGTTGTGCGGGTGGTGATTGTGGGTaGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGCAGTACTTGG | + |
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Preference number: 1 (lower is better) Translates to: APRQSCSSCAGGDCG*AHSALGTPGSGSTW Trigger: CCAAGTACTGCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCGCACAACTACTACAACTCTGCCTAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR CCA 90 bp | TCAGGAAACAGAGGTAGGCAGATCTTCGTTAGTTCAAGGCCAGCCTaGTCAAAAGAGCAAGTTCTAGGCCATCCAGGATTAAACACATCA | + |
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Preference number: 1 (lower is better) Translates to: SGNRGRQIFVSSRPA*SKEQVLGHPGLNTS Trigger: TGATGTGTTTAATCCTGGATGGCCTAGAACTTGCTCTTTTGACCAGGCTGGCCTTGAACTAACGAAGATCTGCCTACCTCTGTTTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCCTAGGCAGAGTTGTAGTAGTTGTGCGGGTGGTGATTGTGGGTGGGCTCGCCCATACACTGTCATaGCCCTCTGGGAGGCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GPLGRVVVVVRVVIVGGLAHTLS*PSGRPP Trigger: AGGGGGCCTCCCAGAGGGGCATGACAGTGTATGGGC...GAGCCCACCCACAATCACCACCCGCACAACTACTACAACTCTGCCTAGGGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAAATGCGTGTGTCCACTGCGTTTCCAGGCATGCATCTGCTCCCGTCGCAGGGGAGATGGGGTTGGCTaGGCCAGCTGGGTCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PKCVCPLRFQACICSRRRGDGVG*ASWVQP Trigger: TGGCTGGACCCAGCTGGCCCAGCCAACCCCATCTCC...CCTGCGACGGGAGCAGATGCATGCCTGGAAACGCAGTGGACACACGCATTTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR CCA 90 bp | CTCACTCAGCTCTGGGTACTCCGGGTTCAGGCAGTACTTGGGATCGTACACCTGGGAGATGGGGTTGGCTaGGCCAGCTGGGTCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LTQLWVLRVQAVLGIVHLGDGVG*ASWVQP Trigger: TGGCTGGACCCAGCTGGCCCAGCCAACCCCATCTCC...CAGGTGTACGATCCCAAGTACTGCCTGAACCCGGAGTACCCAGAGCTGAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR CAA 90 bp | TGGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGCAGTACTaGGGATCGTACACCTGGCGAGGAAGCCCATACACTGTCATGCCC | + |
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Preference number: 2 (lower is better) Translates to: WVGSLSSGYSGFRQY*GSYTWRGSPYTVMP Trigger: GGGCATGACAGTGTATGGGCTTCCTCGCCAGGTGTACGATCCCAAGTACTGCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAACAGCTCAACTCAGTGCTTCCTTCGGGCACTGTTGGGGACACCCAGTTCCCCCCTTCTTCCCATTaGCCCCCTCGGCCTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: LKQLNSVLPSGTVGDTQFPPSSH*PPRPHL Trigger: GAGATGAGGCCGAGGGGGGCAATGGGAAGAAGGGGG...GAACTGGGTGTCCCCAACAGTGCCCGAAGGAAGCACTGAGTTGAGCTGTTTCAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR GCA 90 bp | CGGGTGGTGATTGTGGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGCATGTCGCAGTGTTCCATaGCCAGACCTGGCTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RVVIVGGLTQLWVLRVQACRSVP*PDLAQR Trigger: TCTTTGAGCCAGGTCTGGGCATGGAACACTGCGACA...TGCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGCCAAGCCTGGGTTCTGGGGGCTTCGCTGGAAGGGTTTCTGGTTCTGGGATTCTATGTTGGGCCCTaGGAAAGCTCCAGGGATGAG | + |
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Preference number: 2 (lower is better) Translates to: SGQAWVLGASLEGFLVLGFYVGP*ESSRDE Trigger: CTCATCCCTGGAGCTTTCGCAGGGCCCAACATAGAA...TCCCAGAACCAGAAACCCTTCCAGCGAAGCCCCCAGAACCCAGGCTTGGCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR CCA 90 bp | CTCACTCAGCTCTGGGTACTCCGGGTTCAGGCAGTACTTGGGATCGTACACCTGCAAAGATCTGCCGCTTaGTGCCTGGTGCAGTCATGC | + |
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Preference number: 2 (lower is better) Translates to: LTQLWVLRVQAVLGIVHLQRSAA*CLVQSC Trigger: GCATGACTGCACCAGGCACCAAGCGGCAGATCTTTG...CAGGTGTACGATCCCAAGTACTGCCTGAACCCGGAGTACCCAGAGCTGAGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTGGGTTCTGGGGGCTTCGCTGGAAGGGTTTCTGGTTCTGGGAGGTACTTTCCTTCGGGCACTGTTaGGGACACCCAGTTCTATGT | + |
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Preference number: 2 (lower is better) Translates to: KPGFWGLRWKGFWFWEVLSFGHC*GHPVLC Trigger: ACATAGAACTGGGTGTCCCCAACAGTGCCCGAAGGA...AAGTACCTCCCAGAACCAGAAACCCTTCCAGCGAAGCCCCCAGAACCCAGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAGGCAGAGTTGTAGTAGTTGTGCGGGTGGTGATTGTGGGTGGGCTCACTTTCCATGCCCAGACCTaGCTCAAAGATCTGCCGCTT | + |
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Preference number: 2 (lower is better) Translates to: PLGRVVVVVRVVIVGGLTFHAQT*LKDLPL Trigger: AAGCGGCAGATCTTTGAGCCAGGTCTGGGCATGGAA...AGTGAGCCCACCCACAATCACCACCCGCACAACTACTACAACTCTGCCTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGTGTGGATGGGTGCATGCATGCTGTGGCAAGAGGTGGAAGGCAGTTTAATACGCCATGCAGGAGATaGGGTTGGCTGGGCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KSVDGCMHAVARGGRQFNTPCRR*GWLGQL Trigger: CAGCTGGCCCAGCCAACCCCATCTCCTGCATGGCGT...ATTAAACTGCCTTCCACCTCTTGCCACAGCATGCATGCACCCATCCACACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGTCACATCCACAAACACCAGTCACTGCAAAACCAAAATGCGTGTGTCCAGCCAAGCCTGGGTTCTaGGGGCTTCGCTGGAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LLSHPQTPVTAKPKCVCPAKPGF*GLRWKG Trigger: ACCCTTCCAGCGAAGCCCCCAGAACCCAGGCTTGGC...TGGACACACGCATTTTGGTTTTGCAGTGACTGGTGTTTGTGGATGTGACAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR GCA 90 bp | TGGCAAGAGGTGGAAGGCAGTTTAATGGAGTTGGTCCTTCATCATGTAGGAACTAACCCTATAGGCAGGTaGCAGGGGGCTGGGAGGACG | + |
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Preference number: 2 (lower is better) Translates to: WQEVEGSLMELVLHHVGTNPIGR*QGAGRT Trigger: CGTCCTCCCAGCCCCCTGGCACCTGCCTATAGGGTT...AGTTCCTACATGATGAAGGACCAACTCCATTAAACTGCCTTCCACCTCTTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTACAGCTGTGACATCTCACCAGCCCATGGGATTCAGTTTTAAGGAGAAAGGGTCAGGCCAAGCCTaGGTTCTGGGGGCTTCGCTG | + |
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Preference number: 2 (lower is better) Translates to: TFTAVTSHQPMGFSFKEKGSGQA*VLGASL Trigger: CAGCGAAGCCCCCAGAACCCAGGCTTGGCCTGACCC...TTTCTCCTTAAAACTGAATCCCATGGGCTGGTGAGATGTCACAGCTGTAAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR GCA 90 bp | GAAACAGAGGTAGGCAGATCTTCGTTAGTTCAAGGCCAGCCTGGTCAAAAGAGCGTGTGGATGGGTGCATaGATGCTGTGGCAAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ETEVGRSSLVQGQPGQKSVWMGA*MLWQEV Trigger: CACCTCTTGCCACAGCATGCATGCACCCATCCACAC...GCTCTTTTGACCAGGCTGGCCTTGAACTAACGAAGATCTGCCTACCTCTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR TCA 90 bp | TCACATGGCCTGTGTGTGGAGGTCAGTGGGTACTGCAGAAACCTATTCTTTCTGGCCCCAAGACTCCAATaGTGTCACAGCCATTTATTG | + |
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Preference number: 2 (lower is better) Translates to: SHGLCVEVSGYCRNLFFLAPRLQ*CHSHLL Trigger: CAATAAATGGCTGTGACATCATTGGAGTCTTGGGGC...CAGAAAGAATAGGTTTCTGCAGTACCCACTGACCTCCACACACAGGCCATGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR GCA 90 bp | ACACTCCTGATCATTTTGTTAAAATATATGTGGCATTTGCTATGTGCTCACCTTAATGCGTGTGTCCACTaGGTTTCCAGGCATGCATCT | + |
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Preference number: 2 (lower is better) Translates to: TLLIILLKYMWHLLCAHLNACVH*VSRHAS Trigger: AGATGCATGCCTGGAAACGCAGTGGACACACGCATT...AAGGTGAGCACATAGCAAATGCCACATATATTTTAACAAAATGATCAGGAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR GCA 90 bp | TATGTATACCTCCTACATATATGGGAGGATGGAGATTATCTAAGCCATGCTCCTACAAACACCAGTCACTaGAAAACCAAAATGCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: YVYLLHIWEDGDYLSHAPTNTSH*KTKMRV Trigger: CACACGCATTTTGGTTTTGCAGTGACTGGTGTTTGT...AGGAGCATGGCTTAGATAATCTCCATCCTCCCATATATGTAGGAGGTATACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR CCA 72 bp | GCGTTTCCAGGCATGCATCTGCTCCCGTCGCAGGAATaGGGCAGGGGTCAGGCCAAGCCTGGGTTCTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: AFPGMHLLPSQE*GRGQAKPGFWG Trigger: CCCCCAGAACCCAGGCTTGGCCTGACCCCTGCCCCATTCCTGCGACGGGAGCAGATGCATGCCTGGAAACGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR CAA 90 bp | GCGGGTGGTGATTGTGGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGCTCAAAGATCTGCCGCTaGGTGCCTGGTGCAGTCATG | + |
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Preference number: 3 (lower is better) Translates to: AGGDCGWAHSALGTPGSGSKICR*VPGAVM Trigger: CATGACTGCACCAGGCACCAAGCGGCAGATCTTTGA...GCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR GCA 72 bp | AAATGCGTGTGTCCACTGCGTTTCCAGGCATGCATCTaGTCCCGTCGCAGGAATGGGGCAGGGGTCAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: KCVCPLRFQACI*SRRRNGAGVRP Trigger: TGGCCTGACCCCTGCCCCATTCCTGCGACGGGAGCAGATGCATGCCTGGAAACGCAGTGGACACACGCATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR GCA 72 bp | CCATGCCCAGACCTGGCTCAAAGATCTGCCGCTTGGTaGCTGGTGCAGTCATGCCAGCCTAGAGGATGGAAC | + |
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Preference number: 3 (lower is better) Translates to: PCPDLAQRSAAW*LVQSCQPRGWN Trigger: GTTCCATCCTCTAGGCTGGCATGACTGCACCAGGCACCAAGCGGCAGATCTTTGAGCCAGGTCTGGGCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR CCA 72 bp | GTTCCATGCCCAGACCTGGCTCAAAGATCTGCCGCTTaGTGCCTGGTGCAGTCATGCCAGCCTAGAGGATGG | + |
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Preference number: 3 (lower is better) Translates to: VPCPDLAQRSAA*CLVQSCQPRGW Trigger: CCATCCTCTAGGCTGGCATGACTGCACCAGGCACCAAGCGGCAGATCTTTGAGCCAGGTCTGGGCATGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR CCA 72 bp | GTGCGGGTGGTGATTGTGGGTGGGCTCACTCAGCTCTaGGTACTCCGGGTTCAGGCAGTACTTGGGATCGTA | + |
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Preference number: 3 (lower is better) Translates to: VRVVIVGGLTQL*VLRVQAVLGIV Trigger: TACGATCCCAAGTACTGCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR-3UTR CAA 90 bp | TGCGTGTGTCCACTGCGTTTCCAGGCATGCATCTGCTCCCGTCGCAGGAATGGGACACCCAGTTCTATGTaGGGCCCTGCGAAAGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: CVCPLRFQACICSRRRNGTPSSM*GPAKAP Trigger: TGGAGCTTTCGCAGGGCCCAACATAGAACTGGGTGT...CCCATTCCTGCGACGGGAGCAGATGCATGCCTGGAAACGCAGTGGACACACGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR CCA 72 bp | GACGTTGAGTGTGTCGCAGTGTTCCATGCCCAGACCTaGCTCAAAGATCTGCCGCTTGGTGCCTGGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: DVECVAVFHAQT*LKDLPLGAWCS Trigger: ACTGCACCAGGCACCAAGCGGCAGATCTTTGAGCCAGGTCTGGGCATGGAACACTGCGACACACTCAACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR CCA 72 bp | CACTCAGCTCTGGGTACTCCGGGTTCAGGCAGTACTTaGGATCGTACACCTGGCGAGGAAGCCCATACACTG | + |
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Preference number: 3 (lower is better) Translates to: HSALGTPGSGST*DRTPGEEAHTL Trigger: CAGTGTATGGGCTTCCTCGCCAGGTGTACGATCCCAAGTACTGCCTGAACCCGGAGTACCCAGAGCTGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| 3UTR GCA 72 bp | CACCAGTCACTGCAAAACCAAAATGCGTGTGTCCACTaGGTTTCCAGGCATGCATCTGCTCCCGTCGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: HQSLQNQNACVH*VSRHASAPVAG Trigger: TCCTGCGACGGGAGCAGATGCATGCCTGGAAACGCAGTGGACACACGCATTTTGGTTTTGCAGTGACTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR CCA 72 bp | GAAACAGCTCAACTCAGTGCTTCCTTCGGGCACTGTTaGGGACACCCAGTTCTATGTTGGGCCCTGCGAAAG | + |
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Preference number: 3 (lower is better) Translates to: ETAQLSASFGHC*GHPVLCWALRK Trigger: CTTTCGCAGGGCCCAACATAGAACTGGGTGTCCCCAACAGTGCCCGAAGGAAGCACTGAGTTGAGCTGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR CCA 72 bp | AAGCCTGGGTTCTGGGGGCTTCGCTGGAAGGGTTTCTaGTTCTGGGAGGTACTTACTTGTGAGGGAATAAAG | + |
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Preference number: 3 (lower is better) Translates to: KPGFWGLRWKGF*FWEVLTCEGIK Trigger: CTTTATTCCCTCACAAGTAAGTACCTCCCAGAACCAGAAACCCTTCCAGCGAAGCCCCCAGAACCCAGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR CCA 72 bp | CTACTCAACTGCTCTGCCAATATTAGGTACATTACCTaGCCCAGTAGAACCAGTGCACACCGCATGCACACA | + |
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Preference number: 3 (lower is better) Translates to: LLNCSANIRYIT*PSRTSAHRMHT Trigger: TGTGTGCATGCGGTGTGCACTGGTTCTACTGGGCCAGGTAATGTACCTAATATTGGCAGAGCAGTTGAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR CCA 72 bp | AGAGGTAGGCAGATCTTCGTTAGTTCAAGGCCAGCCTaGTCAAAAGAGCAAGTTCTAGGCCATCCAGGATTA | + |
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Preference number: 3 (lower is better) Translates to: RGRQIFVSSRPA*SKEQVLGHPGL Trigger: TAATCCTGGATGGCCTAGAACTTGCTCTTTTGACCAGGCTGGCCTTGAACTAACGAAGATCTGCCTACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR TCA 72 bp | ATGGAGTTGGTCCTTCATCATGTAGGAACTGGGGTTTaGACACAAAGTTGTCAGACTTGGCAGCAAACAACT | + |
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Preference number: 3 (lower is better) Translates to: MELVLHHVGTGV*TQSCQTWQQTT Trigger: AGTTGTTTGCTGCCAAGTCTGACAACTTTGTGTTCAAACCCCAGTTCCTACATGATGAAGGACCAACTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR CCA 72 bp | CAGTTTAATGGAGTTGGTCCTTCATCATGTAGGAACTaGGGTTTGAACACAAAGTTGTCAGACTTGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: QFNGVGPSSCRN*GLNTKLSDLAA Trigger: TGCTGCCAAGTCTGACAACTTTGTGTTCAAACCCCAGTTCCTACATGATGAAGGACCAACTCCATTAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR-3UTR CAA 90 bp | TGGCAAGAGGTGGAAGGCAGTTTAATGGAGTTGGTCCTTCATCATGTAGGAACTTGTCACAGCCATTTATaGTGCTCCAGTGAAATAGAA | + |
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Preference number: 3 (lower is better) Translates to: WQEVEGSLMELVLHHVGTCHSHL*CSSEIE Trigger: TTCTATTTCACTGGAGCACAATAAATGGCTGTGACA...AGTTCCTACATGATGAAGGACCAACTCCATTAAACTGCCTTCCACCTCTTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| 3UTR TCA 72 bp | TGTATCTTAATTACACACAACACACCTTTACAGCTGTaGCATCTCACCAGCCCATGGGATTCAGTTTTAAGG | + |
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Preference number: 3 (lower is better) Translates to: CILITHNTPLQL*HLTSPWDSVLR Trigger: CCTTAAAACTGAATCCCATGGGCTGGTGAGATGTCACAGCTGTAAAGGTGTGTTGTGTGTAATTAAGATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| CDS-3UTR TCA 90 bp | GTGCGGGTGGTGATTGTGGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGTGCCCATCTGCAGGCTaGTGGTCGCCTGGTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VRVVIVGGLTQLWVLRVQCPSAG*WSPGPE Trigger: CTCTGGACCAGGCGACCATCAGCCTGCAGATGGGCA...CTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| CDS-3UTR TCA 90 bp | GACCTGGCTCAAAGATCTGCCGCTTGGTGCCTGGTGCAGTCATGCCAGCCTAGAAGCTCCTGCTCCCGCTaGTGGTCGTATTTCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DLAQRSAAWCLVQSCQPRSSCSR*WSYFWA Trigger: GGCCCAGAAATACGACCATCAGCGGGAGCAGGAGCT...TCTAGGCTGGCATGACTGCACCAGGCACCAAGCGGCAGATCTTTGAGCCAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| CDS-3UTR TCA 90 bp | TCAGGCCAAGCCTGGGTTCTGGGGGCTTCGCTGGAAGGGTTTCTGGTTCTGGGAGCCTGGTCCAGAGGCTaGTCTGTACCCAGTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SGQAWVLGASLEGFLVLGAWSRG*SVPSLG Trigger: TCCCAAACTGGGTACAGATCAGCCTCTGGACCAGGC...TCCCAGAACCAGAAACCCTTCCAGCGAAGCCCCCAGAACCCAGGCTTGGCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| CDS-3UTR CCA 90 bp | GTCCACTGCGTTTCCAGGCATGCATCTGCTCCCGTCGCAGGAATGGGGCAGGGGTTGGGATCGTACACCTaGCGAGGAAGCCCATACACT | + |
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Preference number: 4 (lower is better) Translates to: VHCVSRHASAPVAGMGQGLGSYT*RGSPYT Trigger: AGTGTATGGGCTTCCTCGCCAGGTGTACGATCCCAA...CCCCTGCCCCATTCCTGCGACGGGAGCAGATGCATGCCTGGAAACGCAGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| CDS-3UTR CCA 90 bp | CCAAAATGCGTGTGTCCACTGCGTTTCCAGGCATGCATCTGCTCCCGTCGCAGGGGTGGTGATTGTGGGTaGGCTCACTCAGCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: PKCVCPLRFQACICSRRRGGDCG*AHSALG Trigger: ACCCAGAGCTGAGTGAGCCCACCCACAATCACCACC...CCTGCGACGGGAGCAGATGCATGCCTGGAAACGCAGTGGACACACGCATTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
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| CDS-3UTR TCA 90 bp | TGGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGCAGTACTTGGGATCGGCCAGGAGAGTGGACTaGACTTGTGTATGGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: WVGSLSSGYSGFRQYLGSARRVD*TCVWLV Trigger: CACCAACCATACACAAGTTCAGTCCACTCTCCTGGC...CGATCCCAAGTACTGCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
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| CDS-3UTR CCA 90 bp | GGGCCCCTAGGCAGAGTTGTAGTAGTTGTGCGGGTGGTGATTGTGGGTGGGCTCTCATGCCCTGCTGACTaGCAAACTTGTTGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPLGRVVVVVRVVIVGGLSCPAD*QTCWCP Trigger: TGGGCACCAACAAGTTTGCCAGTCAGCAGGGCATGA...GAGCCCACCCACAATCACCACCCGCACAACTACTACAACTCTGCCTAGGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR TCA 90 bp | TGCGTGTGTCCACTGCGTTTCCAGGCATGCATCTGCTCCCGTCGCAGGAATGGGAGCTGGTGCCAGTTCTaGGTTGACTCATTGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCPLRFQACICSRRRNGSWCQF*VDSLTF Trigger: GAAGGTCAATGAGTCAACTCAGAACTGGCACCAGCT...CCCATTCCTGCGACGGGAGCAGATGCATGCCTGGAAACGCAGTGGACACACGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR TCA 90 bp | TGCAAGCTGACGTTGAGTGTGTCGCAGTGTTCCATGCCCAGACCTGGCTCAAAGGCCTGGTCCAGAGGCTaGTCTGTACCCAGTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKLTLSVSQCSMPRPGSKAWSRG*SVPSLG Trigger: TCCCAAACTGGGTACAGATCAGCCTCTGGACCAGGC...CTTTGAGCCAGGTCTGGGCATGGAACACTGCGACACACTCAACGTCAGCTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR GCA 90 bp | CATCTGCAAGCTGACGTTGAGTGTGTCGCAGTGTTCCATGCCCAGACCTGGCTCTACCGTAGGCCGTCATaGCCTGCTGACTGGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: HLQADVECVAVFHAQTWLYRRPS*PADWQT Trigger: AGTTTGCCAGTCAGCAGGGCATGACGGCCTACGGTA...GAGCCAGGTCTGGGCATGGAACACTGCGACACACTCAACGTCAGCTTGCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR TCA 90 bp | GATCTGCCGCTTGGTGCCTGGTGCAGTCATGCCAGCCTAGAGGATGGAACAGCCGTGCCAGTTCTGAGTTaGCTCATTGACCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DLPLGAWCSHASLEDGTAVPVLS*LIDLLH Trigger: GTGAAGAAGGTCAATGAGTCAACTCAGAACTGGCAC...GGCTGTTCCATCCTCTAGGCTGGCATGACTGCACCAGGCACCAAGCGGCAGATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCCCATCTGCAAGCTGACGTTGAGTGTGTCGCAGTGTTCCATGCCCAGACCTGTTTCCTTTTGTCTTaGCCATGCTGGCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAHLQADVECVAVFHAQTCFLLS*PCWPEP Trigger: TGGCTCTGGCCAGCATGGCCAAGACAAAAGGAAACA...GGTCTGGGCATGGAACACTGCGACACACTCAACGTCAGCTTGCAGATGGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR CCA 90 bp | CCAAAATGCGTGTGTCCACTGCGTTTCCAGGCATGCATCTGCTCCCGTCGCAGGGATCTGTACCCAGTTTaGGATCATAGAGGTGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PKCVCPLRFQACICSRRRDLYPV*DHRGDA Trigger: GGCGTCACCTCTATGATCCCAAACTGGGTACAGATC...CCTGCGACGGGAGCAGATGCATGCCTGGAAACGCAGTGGACACACGCATTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCCCATCTGCAAGCTGACGTTGAGTGTGTCGCAGTGTTCCATGCCCAGACCGATCTGTACCCAGTTTaGGATCATAGAGGTGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAHLQADVECVAVFHAQTDLYPV*DHRGDA Trigger: GGCGTCACCTCTATGATCCCAAACTGGGTACAGATC...GGTCTGGGCATGGAACACTGCGACACACTCAACGTCAGCTTGCAGATGGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGTCACATCCACAAACACCAGTCACTGCAAAACCAAAATGCGTGTGTCCATGCCTGGTGCAGTCATaGCAGCCTGGCTGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSHPQTPVTAKPKCVCPCLVQS*QPGWHP Trigger: AGGGTGCCAGCCAGGCTGGCATGACTGCACCAGGCA...TGGACACACGCATTTTGGTTTTGCAGTGACTGGTGTTTGTGGATGTGACAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | CCCCTAGGCAGAGTTGTAGTAGTTGTGCGGGTGGTGATTGTGGGTGGGCTCACTGCCTCAAAGATGTCGTaGGGTTTCACCCCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLGRVVVVVRVVIVGGLTASKMS*GFTPYL Trigger: CAAGTATGGGGTGAAACCCCACGACATCTTTGAGGC...AGTGAGCCCACCCACAATCACCACCCGCACAACTACTACAACTCTGCCTAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR CCA 90 bp | GTCCACTGCGTTTCCAGGCATGCATCTGCTCCCGTCGCAGGAATGGGGCAGGGGGAACTTGTGTATGGTTaGTGTTTTCAAACAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VHCVSRHASAPVAGMGQGELVYG*CFQTGR Trigger: ACGACCTGTTTGAAAACACCAACCATACACAAGTTC...CCCCTGCCCCATTCCTGCGACGGGAGCAGATGCATGCCTGGAAACGCAGTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | GAAACAGCTCAACTCAGTGCTTCCTTCGGGCACTGTTGGGGACACCCAGTTCTACAAAGATCTGCCGCTTaGTGCCTGGTGCAGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ETAQLSASFGHCWGHPVLQRSAA*CLVQSC Trigger: GCATGACTGCACCAGGCACCAAGCGGCAGATCTTTG...TAGAACTGGGTGTCCCCAACAGTGCCCGAAGGAAGCACTGAGTTGAGCTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR TCA 90 bp | GTTGAGTGTGTCGCAGTGTTCCATGCCCAGACCTGGCTCAAAGATCTGCCGCTTCCATCTGCAGTCCAATaGTGTTCCTGCCTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VECVAVFHAQTWLKDLPLPSAVQ*CSCLLS Trigger: TGAGAGAAGGCAGGAACATCATTGGACTGCAGATGG...AAGCGGCAGATCTTTGAGCCAGGTCTGGGCATGGAACACTGCGACACACTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR GCA 90 bp | TCACATGGCCTGTGTGTGGAGGTCAGTGGGTACTGCAGAAACCTATTCTTTCTGAGATCTGCCGCTTGGTaGCTGGTGCAGTCATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHGLCVEVSGYCRNLFFLRSAAW*LVQSCQ Trigger: CTGGCATGACTGCACCAGGCACCAAGCGGCAGATCT...CAGAAAGAATAGGTTTCTGCAGTACCCACTGACCTCCACACACAGGCCATGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGGTGGAAGGCAGTTTAATGGAGTTGGTCCTTCATCATGTAGGAACTGCCCATACACTGTCATaGCCCTCTGGGAGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WQEVEGSLMELVLHHVGTAHTLS*PSGRPP Trigger: AGGGGGCCTCCCAGAGGGGCATGACAGTGTATGGGC...AGTTCCTACATGATGAAGGACCAACTCCATTAAACTGCCTTCCACCTCTTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | GTGCGGGTGGTGATTGTGGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGAACTTGTGTATGGTTaGTGTTTTCAAACAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VRVVIVGGLTQLWVLRVQELVYG*CFQTGR Trigger: ACGACCTGTTTGAAAACACCAACCATACACAAGTTC...CTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTTACAGCTGTGACATCTCACCAGCCCATGGGATTCAGTTTTAAGGAGAAATGCCCATCTGCAGGCTaGTGGTCGCCTGGTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TFTAVTSHQPMGFSFKEKCPSAG*WSPGPE Trigger: CTCTGGACCAGGCGACCATCAGCCTGCAGATGGGCA...TTTCTCCTTAAAACTGAATCCCATGGGCTGGTGAGATGTCACAGCTGTAAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR GCA 90 bp | CATCTGCAAGCTGACGTTGAGTGTGTCGCAGTGTTCCATGCCCAGACCTGGCTCCCGCTCTTGTTTCTCTaGATACTTGACTCCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: HLQADVECVAVFHAQTWLPLLFL*ILDSHI Trigger: AATGTGGGAGTCAAGTATGCAGAGAAACAAGAGCGG...GAGCCAGGTCTGGGCATGGAACACTGCGACACACTCAACGTCAGCTTGCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGTCCTTCATCATGTAGGAACTGGGGTTTGAACACAAAGTTGTCAGACTTGAGCTCCTGCTCCCGCTaGTGGTCGTATTTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGPSSCRNWGLNTKLSDLSSCSR*WSYFWA Trigger: GGCCCAGAAATACGACCATCAGCGGGAGCAGGAGCT...CAAGTCTGACAACTTTGTGTTCAAACCCCAGTTCCTACATGATGAAGGACCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR TCA 90 bp | GAAACAGAGGTAGGCAGATCTTCGTTAGTTCAAGGCCAGCCTGGTCAAAAGAGCGCCAGGAGAGTGGACTaGACTTGTGTATGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETEVGRSSLVQGQPGQKSARRVD*TCVWLV Trigger: CACCAACCATACACAAGTTCAGTCCACTCTCCTGGC...GCTCTTTTGACCAGGCTGGCCTTGAACTAACGAAGATCTGCCTACCTCTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | CTGAGAACAAGGCAGGCATATAGAGAAAGCCATGTCCCAAAGTTAGCTACTCAAGCAGTCATGCCAGCCTaGCTGGCACCCTTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRTRQAYRESHVPKLATQAVMPA*LAPLLV Trigger: CACCAACAAGGGTGCCAGCCAGGCTGGCATGACTGC...TTGAGTAGCTAACTTTGGGACATGGCTTTCTCTATATGCCTGCCTTGTTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | GTTGGTCCTTCATCATGTAGGAACTGGGGTTTGAACACAAAGTTGTCAGACTTGTTGTCTTGGCCATGCTaGCCAGAGCCAGGAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGPSSCRNWGLNTKLSDLLSWPC*PEPGEW Trigger: CCACTCTCCTGGCTCTGGCCAGCATGGCCAAGACAA...CAAGTCTGACAACTTTGTGTTCAAACCCCAGTTCCTACATGATGAAGGACCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | CTGCTGTCACATCCACAAACACCAGTCACTGCAAAACCAAAATGCGTGTGTCCATTCCATGCCCAGACCTaGCTCAAAGATCTGCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSHPQTPVTAKPKCVCPFHAQT*LKDLPL Trigger: AAGCGGCAGATCTTTGAGCCAGGTCTGGGCATGGAA...TGGACACACGCATTTTGGTTTTGCAGTGACTGGTGTTTGTGGATGTGACAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGGTGGAAGGCAGTTTAATGGAGTTGGTCCTTCATCATGTAGGAACTTGTCGCAGTGTTCCATaGCCAGACCTGGCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WQEVEGSLMELVLHHVGTCRSVP*PDLAQR Trigger: TCTTTGAGCCAGGTCTGGGCATGGAACACTGCGACA...AGTTCCTACATGATGAAGGACCAACTCCATTAAACTGCCTTCCACCTCTTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGTGGATGGGTGCATGCATGCTGTGGCAAGAGGTGGAAGGCAGTTTAATTGTTTCCTTTTGTCTTaGCCATGCTGGCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSVDGCMHAVARGGRQFNCFLLS*PCWPEP Trigger: TGGCTCTGGCCAGCATGGCCAAGACAAAAGGAAACA...ATTAAACTGCCTTCCACCTCTTGCCACAGCATGCATGCACCCATCCACACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGAGGTGGAAGGCAGTTTAATGGAGTTGGTCCTTCATCATGTAGGAACTTCATGCCCTGCTGACTaGCAAACTTGTTGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WQEVEGSLMELVLHHVGTSCPAD*QTCWCP Trigger: TGGGCACCAACAAGTTTGCCAGTCAGCAGGGCATGA...AGTTCCTACATGATGAAGGACCAACTCCATTAAACTGCCTTCCACCTCTTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR TCA 90 bp | AAAAGTGTGGATGGGTGCATGCATGCTGTGGCAAGAGGTGGAAGGCAGTTTAATGTGCCAGTTCTGAGTTaGCTCATTGACCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSVDGCMHAVARGGRQFNVPVLS*LIDLLH Trigger: GTGAAGAAGGTCAATGAGTCAACTCAGAACTGGCAC...ATTAAACTGCCTTCCACCTCTTGCCACAGCATGCATGCACCCATCCACACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGAGGTGGAAGGCAGTTTAATGGAGTTGGTCCTTCATCATGTAGGAACTCCATCTGCAGTCCAATaGTGTTCCTGCCTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WQEVEGSLMELVLHHVGTPSAVQ*CSCLLS Trigger: TGAGAGAAGGCAGGAACATCATTGGACTGCAGATGG...AGTTCCTACATGATGAAGGACCAACTCCATTAAACTGCCTTCCACCTCTTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR GCA 90 bp | TCACATGGCCTGTGTGTGGAGGTCAGTGGGTACTGCAGAAACCTATTCTTTCTGCCGCTCTTGTTTCTCTaGATACTTGACTCCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: SHGLCVEVSGYCRNLFFLPLLFL*ILDSHI Trigger: AATGTGGGAGTCAAGTATGCAGAGAAACAAGAGCGG...CAGAAAGAATAGGTTTCTGCAGTACCCACTGACCTCCACACACAGGCCATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGAGGTGGAAGGCAGTTTAATGGAGTTGGTCCTTCATCATGTAGGAACTGCCTCAAAGATGTCGTaGGGTTTCACCCCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: WQEVEGSLMELVLHHVGTASKMS*GFTPYL Trigger: CAAGTATGGGGTGAAACCCCACGACATCTTTGAGGC...AGTTCCTACATGATGAAGGACCAACTCCATTAAACTGCCTTCCACCTCTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| 3UTR CAA 72 bp | AATGGAGTTGGTCCTTCATCATGTAGGAACTGGGGTTaGAACACAAAGTTGTCAGACTTGGCAGCAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NGVGPSSCRNWG*NTKLSDLAANN Trigger: GTTGTTTGCTGCCAAGTCTGACAACTTTGTGTTCAAACCCCAGTTCCTACATGATGAAGGACCAACTCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR GCA 90 bp | ACACTCCTGATCATTTTGTTAAAATATATGTGGCATTTGCTATGTGCTCACCTTTACCGTAGGCCGTCATaGCCTGCTGACTGGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TLLIILLKYMWHLLCAHLYRRPS*PADWQT Trigger: AGTTTGCCAGTCAGCAGGGCATGACGGCCTACGGTA...AAGGTGAGCACATAGCAAATGCCACATATATTTTAACAAAATGATCAGGAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| 3UTR CAA 72 bp | CCTTCATCATGTAGGAACTGGGGTTTGAACACAAAGTaGTCAGACTTGGCAGCAAACAACTTTGTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSCRNWGLNTK*SDLAANNFVVC Trigger: ACACACAACAAAGTTGTTTGCTGCCAAGTCTGACAACTTTGTGTTCAAACCCCAGTTCCTACATGATGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CAA 90 bp | AGGCATGCATCTGCTCCCGTCGCAGGAATGGGGCAGGGGTCAGGCCAAGCCTGGACTCCCACATTGACTTaGTTTCCTTTTGTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RHASAPVAGMGQGSGQAWTPTLT*FPFVLA Trigger: GGCCAAGACAAAAGGAAACAAAGTCAATGTGGGAGT...CCAGGCTTGGCCTGACCCCTGCCCCATTCCTGCGACGGGAGCAGATGCATGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CAA 90 bp | CGGGTGGTGATTGTGGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGCAACTCCCACATTGACTTaGTTTCCTTTTGTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVVIVGGLTQLWVLRVQATPTLT*FPFVLA Trigger: GGCCAAGACAAAAGGAAACAAAGTCAATGTGGGAGT...TGCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR CAA 90 bp | GCGGGTGGTGATTGTGGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGCTGTTTCTCTGCATACTaGACTCCCACATTGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGGDCGWAHSALGTPGSGCFSAY*TPTLTL Trigger: CAAAGTCAATGTGGGAGTCAAGTATGCAGAGAAACA...GCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR CAA 90 bp | CGGGTGGTGATTGTGGGTGGGCTCACTCAGCTCTGGGTACTCCGGGTTCAGGCAGGTTTCACCCCATACTaGGTAATGGCTTTGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RVVIVGGLTQLWVLRVQAGFTPY*VMALMK Trigger: TTTCATCAAAGCCATTACCAAGTATGGGGTGAAACC...TGCCTGAACCCGGAGTACCCAGAGCTGAGTGAGCCCACCCACAATCACCACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR CAA 90 bp | GAAACAGCTCAACTCAGTGCTTCCTTCGGGCACTGTTGGGGACACCCAGTTCTATCAAAGATCTGCCGCTaGGTGCCTGGTGCAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ETAQLSASFGHCWGHPVLSKICR*VPGAVM Trigger: CATGACTGCACCAGGCACCAAGCGGCAGATCTTTGA...TAGAACTGGGTGTCCCCAACAGTGCCCGAAGGAAGCACTGAGTTGAGCTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CAA 90 bp | CCCCTAGGCAGAGTTGTAGTAGTTGTGCGGGTGGTGATTGTGGGTGGGCTCACTCCCGGCTGCAGCTTGTaGATAAATTCGCAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: PLGRVVVVVRVVIVGGLTPGCSL*INSQRM Trigger: CATTCTTTGCGAATTTATCAACAAGCTGCAGCCGGG...AGTGAGCCCACCCACAATCACCACCCGCACAACTACTACAACTCTGCCTAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS-3UTR CAA 90 bp | GAAACAGAGGTAGGCAGATCTTCGTTAGTTCAAGGCCAGCCTGGTCAAAAGAGCATCTGCAAGCTGACGTaGAGTGTGTCGCAGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ETEVGRSSLVQGQPGQKSICKLT*SVSQCS Trigger: GGAACACTGCGACACACTCAACGTCAGCTTGCAGAT...GCTCTTTTGACCAGGCTGGCCTTGAACTAACGAAGATCTGCCTACCTCTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CAA 90 bp | CTGCTGTCACATCCACAAACACCAGTCACTGCAAAACCAAAATGCGTGTGTCCACCCGGCTGCAGCTTGTaGATAAATTCGCAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: LLSHPQTPVTAKPKCVCPPGCSL*INSQRM Trigger: CATTCTTTGCGAATTTATCAACAAGCTGCAGCCGGG...TGGACACACGCATTTTGGTTTTGCAGTGACTGGTGTTTGTGGATGTGACAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CAA 90 bp | GAAACAGAGGTAGGCAGATCTTCGTTAGTTCAAGGCCAGCCTGGTCAAAAGAGCGGTTTCACCCCATACTaGGTAATGGCTTTGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ETEVGRSSLVQGQPGQKSGFTPY*VMALMK Trigger: TTTCATCAAAGCCATTACCAAGTATGGGGTGAAACC...GCTCTTTTGACCAGGCTGGCCTTGAACTAACGAAGATCTGCCTACCTCTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CAA 90 bp | GAAACAGAGGTAGGCAGATCTTCGTTAGTTCAAGGCCAGCCTGGTCAAAAGAGCTGTTTCTCTGCATACTaGACTCCCACATTGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ETEVGRSSLVQGQPGQKSCFSAY*TPTLTL Trigger: CAAAGTCAATGTGGGAGTCAAGTATGCAGAGAAACA...GCTCTTTTGACCAGGCTGGCCTTGAACTAACGAAGATCTGCCTACCTCTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS-3UTR CAA 90 bp | GTTGGTCCTTCATCATGTAGGAACTGGGGTTTGAACACAAAGTTGTCAGACTTGGAGAGTGGACTGAACTaGTGTATGGTTGGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGPSSCRNWGLNTKLSDLESGLN*CMVGVF Trigger: GAAAACACCAACCATACACAAGTTCAGTCCACTCTC...CAAGTCTGACAACTTTGTGTTCAAACCCCAGTTCCTACATGATGAAGGACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001384.6 |
||
| CDS TCA 72 bp | CCCCTCTCCCCCACCACATCTCACCAGGTGTCCCACTaGCTACACAGACCTGGCTGGCACCCTTGTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PLSPTTSHQVSH*LHRPGWHPCWC Trigger: GCACCAACAAGGGTGCCAGCCAGGTCTGTGTAGTCAGTGGGACACCTGGTGAGATGTGGTGGGGGAGAGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214601.2 |
||
| CDS GCA 72 bp | TCGCAGTGTTCCATGCCCAGACCTGGCTCAAAGATCTaGCGCTTGGTGCCTGGTGCAGTCATGCCAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQCSMPRPGSKI*RLVPGAVMPAW Trigger: CCAGGCTGGCATGACTGCACCAGGCACCAAGCGGCAGATCTTTGAGCCAGGTCTGGGCATGGAACACTGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001384.6 ENSMUST00000216872.2 |
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| CDS CCA 72 bp | TGGTCGCCTGGTCCAGAGGCTGATCTGTACCCAGTTTaGGATCATAGAGGTGACGCCGTGTACCGTAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: WSPGPEADLYPV*DHRGDAVYRRP Trigger: CGGCCTACGGTACACGGCGTCACCTCTATGATCCCAAACTGGGTACAGATCAGCCTCTGGACCAGGCGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001384.6 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS CAA 72 bp | CAAAGAATGATCCCGTCTTTGAGGCCATCCATGAAGTaGTTCCCGATGCGCCGGCCTGTCACCCCCTCAATC | + |
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Preference number: 6 (lower is better) Translates to: QRMIPSLRPSMK*FPMRRPVTPSI Trigger: GATTGAGGGGGTGACAGGCCGGCGCATCGGGAACAACTTCATGGATGGCCTCAAAGACGGGATCATTCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001384.6 ENSMUST00000214601.2 |
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| CDS CAA 72 bp | GGCCATGCTGGCCAGAGCCAGGAGAGTGGACTGAACTaGTGTATGGTTGGTGTTTTCAAACAGGTCGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GHAGQSQESGLN*CMVGVFKQVVG Trigger: GCCAACGACCTGTTTGAAAACACCAACCATACACAAGTTCAGTCCACTCTCCTGGCTCTGGCCAGCATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001384.6 ENSMUST00000213607.2 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS CAA 90 bp | ATAAATTCGCAAAGAATGATCCCGTCTTTGAGGCCATCCATGAAGTaGTTCCCGATGCGCCGGCCTGTCACCCCCTCAATCCACTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: INSQRMIPSLRPSMK*FPMRRPVTPSIHSL Trigger: GAGAGAGTGGATTGAGGGGGTGACAGGCCGGCGCATCGGGAACAACTTCATGGATGGCCTCAAAGACGGGATCATTCTTTGCGAATTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001384.6 ENSMUST00000214601.2 |
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| CDS CAA 90 bp | AATCTCCGCTCTTGTTTCTCTGCATACTTGACTCCCACATTGACTTaGTTTCCTTTTGTCTTGGCCATGCTGGCCAGAGCCAGGAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: NLRSCFSAYLTPTLT*FPFVLAMLARARRV Trigger: CACTCTCCTGGCTCTGGCCAGCATGGCCAAGACAAAAGGAAACAAAGTCAATGTGGGAGTCAAGTATGCAGAGAAACAAGAGCGGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001384.6 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS CCA 72 bp | CCAGAGCCAGGAGAGTGGACTGAACTTGTGTATGGTTaGTGTTTTCAAACAGGTCGTTGGCCTCAAAGATGT | + |
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Preference number: 6 (lower is better) Translates to: PEPGEWTELVYG*CFQTGRWPQRC Trigger: ACATCTTTGAGGCCAACGACCTGTTTGAAAACACCAACCATACACAAGTTCAGTCCACTCTCCTGGCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001384.6 ENSMUST00000213607.2 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS CCA 72 bp | CTTTTGTCTTGGCCATGCTGGCCAGAGCCAGGAGAGTaGACTGAACTTGTGTATGGTTGGTGTTTTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: LLSWPCWPEPGE*TELVYGWCFQT Trigger: TGTTTGAAAACACCAACCATACACAAGTTCAGTCCACTCTCCTGGCTCTGGCCAGCATGGCCAAGACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001384.6 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS CAA 72 bp | ATGTCGTGGGGTTTCACCCCATACTTGGTAATGGCTTaGATGAAATTACCTATGTTCTCCAGCTGGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: MSWGFTPYLVMA*MKLPMFSSWCQ Trigger: CTGGCACCAGCTGGAGAACATAGGTAATTTCATCAAAGCCATTACCAAGTATGGGGTGAAACCCCACGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001384.6 ENSMUST00000213607.2 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS CAA 72 bp | TCTTGTTTCTCTGCATACTTGACTCCCACATTGACTTaGTTTCCTTTTGTCTTGGCCATGCTGGCCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: SCFSAYLTPTLT*FPFVLAMLARA Trigger: GGCTCTGGCCAGCATGGCCAAGACAAAAGGAAACAAAGTCAATGTGGGAGTCAAGTATGCAGAGAAACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001384.6 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS CAA 72 bp | GCCTTCTCTCAACTTCTCCGGCTCAAATCTCCGCTCTaGTTTCTCTGCATACTTGACTCCCACATTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: AFSQLLRLKSPL*FLCILDSHIDF Trigger: AAAGTCAATGTGGGAGTCAAGTATGCAGAGAAACAAGAGCGGAGATTTGAGCCGGAGAAGTTGAGAGAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001384.6 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS CAA 90 bp | GATGTTCCTGCCTTCTCTCAACTTCTCCGGCTCAAATCTCCGCTCTaGTTTCTCTGCATACTTGACTCCCACATTGACTTTGTTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: DVPAFSQLLRLKSPL*FLCILDSHIDFVSF Trigger: AAAGGAAACAAAGTCAATGTGGGAGTCAAGTATGCAGAGAAACAAGAGCGGAGATTTGAGCCGGAGAAGTTGAGAGAAGGCAGGAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001384.6 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS GCA 72 bp | CAACTTCTCCGGCTCAAATCTCCGCTCTTGTTTCTCTaGATACTTGACTCCCACATTGACTTTGTTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: QLLRLKSPLLFL*ILDSHIDFVSF Trigger: AAAGGAAACAAAGTCAATGTGGGAGTCAAGTATGCAGAGAAACAAGAGCGGAGATTTGAGCCGGAGAAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001384.6 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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| CDS CAA 72 bp | TTGGCCTCAAAGATGTCGTGGGGTTTCACCCCATACTaGGTAATGGCTTTGATGAAATTACCTATGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LASKMSWGFTPY*VMALMKLPMFS Trigger: GGAGAACATAGGTAATTTCATCAAAGCCATTACCAAGTATGGGGTGAAACCCCACGACATCTTTGAGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001384.6 ENSMUST00000213607.2 ENSMUST00000214601.2 ENSMUST00000216872.2 |
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