Pregenerated sensors for CNKSR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028841Ensembl transcript IDs: ENSMUST00000030645.9
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTaGGGATGGGTTGAGGGATTTCTGCCTCACAGAGAGGGCGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: GNLFECPRKAGTSQI*GWVEGFLPHREGGR Trigger: TCTCCCGCCCTCTCTGTGAGGCAGAAATCCCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| 3UTR CAA 90 bp | TTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTaGAGGGATTTCTGCCTCACAGAGAGGGCGGGAGATTTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LNAPGRQGHPRSEDG*RDFCLTERAGDFLP Trigger: TGGAAGGAAATCTCCCGCCCTCTCTGTGAGGCAGAAATCCCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| 3UTR-3UTR TCA 90 bp | CGTCAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACTCTAGGGGACACGTaGGCAGAGTGTGTGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: RQRNQLYLVEKRLSCKINTLGDT*AECVEG Trigger: ACCTTCCACACACTCTGCTCACGTGTCCCCTAGAGT...GTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCGGGACATCCCAGATCTaGGGATGGGTTGAGGGATTT | + |
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Preference number: 2 (lower is better) Translates to: QRNQLYLVEKRLSCKINTGTSQI*GWVEGF Trigger: AAATCCCTCAACCCATCCTCAGATCTGGGATGTCCC...GGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| 3UTR-3UTR GCA 90 bp | CGTCAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACGGAAACCTTTTTGAATaGCCCAGGAAGGCAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: RQRNQLYLVEKRLSCKINGNLFE*PRKAGT Trigger: TGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCC...GTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTGACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| 3UTR TCA 72 bp | CAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTaGGGGATTTCTGCCTCACAGAGAGGGCGGGAGATT | + |
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Preference number: 3 (lower is better) Translates to: QEGRDIPDLRMG*GISASQRGREI Trigger: AATCTCCCGCCCTCTCTGTGAGGCAGAAATCCCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| 3UTR GCA 72 bp | GGACATCCCAGATCTGAGGATGGGTTGAGGGATTTCTaGCTCACAGAGAGGGCGGGAGATTTCCTTCCACTC | + |
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Preference number: 3 (lower is better) Translates to: GHPRSEDGLRDF*LTERAGDFLPL Trigger: GAGTGGAAGGAAATCTCCCGCCCTCTCTGTGAGGCAGAAATCCCTCAACCCATCCTCAGATCTGGGATGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| 3UTR TCA 72 bp | TTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTaGGGATGGGTTGAGGGATTTCTGCCTCACAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: FECPRKAGTSQI*GWVEGFLPHRE Trigger: CTCTCTGTGAGGCAGAAATCCCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | ACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGGCAGCGGCGCCAGCGTaGGCCCATAAAGCCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: TFLNAPGRQGHPRSEDGLAAAPA*AHKATG Trigger: CCCGGTGGCTTTATGGGCCCACGCTGGCGCCGCTGC...CAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCGTGGTCCAGGGGGAGTaGGCGGGGACTGAGCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SGLGNLFECPRKAGTSQIVVQGE*AGTERQ Trigger: TTGACGCTCAGTCCCCGCCCACTCCCCCTGGACCAC...GATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | TTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGAGGGAGCTGGTGGCAGCCTaGACCCCTACTCGGGACACA | + |
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Preference number: 4 (lower is better) Translates to: FLNAPGRQGHPRSEDGLRELVAA*TPTRDT Trigger: TGTGTCCCGAGTAGGGGTTCAGGCTGCCACCAGCTC...CCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | CCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCGCACGCTCATTGAGATaGGGGTCACGGTTGCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PDLVWETFLNAPGRQGHPARSLR*GSRLRL Trigger: GAGGCGCAACCGTGACCCTCATCTCAATGAGCGTGC...GGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTCTGGGCAGTCCTCCTaGAGGACTTGGCCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGLGNLFECPRKAGTSQISGQSS*RTWPSS Trigger: GGAGCTGGGCCAAGTCCTGCAGGAGGACTGCCCAGA...GATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | CTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACAAGCAGTCTTCCTCTCTaGCAGAGGAGGGGGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LSRSGLGNLFECPRKAGTSSLPL*QRRGPG Trigger: GCCGGGCCCCCTCCTCTGCCAGAGAGGAAGACTGCT...TGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | ACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGACTCCACGCTTGAGCTaGGCCAGGAGAAGCGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: TFLNAPGRQGHPRSEDGLTPRLS*ARRSGA Trigger: CGCTCCGCTTCTCCTGGCCCAGCTCAAGCGTGGAGT...CAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | TTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGAGGCTCCGCCATTGTTCATaGGTCAGGGGCTGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FLNAPGRQGHPRSEDGLRLRHCS*VRGWGW Trigger: CCAGCCCCAGCCCCTGACCCATGAACAATGGCGGAG...CCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | TTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGAGGAGGGACACCCCTCCCTaGCTCAGCCCCTGTACCATT | + |
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Preference number: 4 (lower is better) Translates to: FLNAPGRQGHPRSEDGLRRDTPP*LSPCTI Trigger: AATGGTACAGGGGCTGAGGCAGGGAGGGGTGTCCCT...CCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCGGATCTGGGAGCTGGTaGCAGCCTGAACCCCTACTC | + |
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Preference number: 4 (lower is better) Translates to: SGLGNLFECPRKAGTSQIGSGSW*QPEPLL Trigger: GAGTAGGGGTTCAGGCTGCCACCAGCTCCCAGATCC...GATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | CCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCGTGTCTCAGCACAGTTaGCCAGAGAGCCTTGGACCA | + |
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Preference number: 4 (lower is better) Translates to: PDLVWETFLNAPGRQGHPVSQHS*PESLGP Trigger: TGGTCCAAGGCTCTCTGGGCAACTGTGCTGAGACAC...GGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | ACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGAAGAGCCTCGAGGCTTTaGGGACAGAGCTGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TYPDLVWETFLNAPGRQGRASRL*GQSCSR Trigger: CCTGCTGCAGCTCTGTCCCCAAAGCCTCGAGGCTCT...TCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | ACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGCAGGCTGACCTTTGCTaGTTCCCTCAGCAGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: TFLNAPGRQGHPRSEDGLQADLC*FPQQLP Trigger: AGGGAGCTGCTGAGGGAACCAGCAAAGGTCAGCCTG...CAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | CTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACAATAGGGTGTGTCCCTTaGGCACAAACCAGCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRSGLGNLFECPRKAGTIGCVP*AQTSSG Trigger: GCCGCTGCTGGTTTGTGCTCAAGGGACACACCCTAT...TGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | AAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCACCTGCAGCTTTGCCTTaGGGGTGCTCTGGAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: KHLSRSGLGNLFECPRKAPAALP*GCSGVP Trigger: GGGCACTCCAGAGCACCCTCAAGGCAAAGCTGCAGG...TGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | TTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGAGGACTCGGGACACAAAGTaGAGGCAGTTGCTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: FLNAPGRQGHPRSEDGLRTRDTK*RQLLVV Trigger: CACCACCAGCAACTGCCTGCACTTTGTGTCCCGAGT...CCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | TTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGAGGTGCCCGGATACGGTGTaGACGCTCATTGAGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: FLNAPGRQGHPRSEDGLRCPDTV*TLIEMR Trigger: CCTCATCTCAATGAGCGTGCACACCGTATCCGGGCA...CCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | CCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGAATGAGTTCCTGGTaGCCCAAAGGCCACACAGTC | + |
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Preference number: 4 (lower is better) Translates to: PDLVWETFLNAPGRQGHPRMSSW*PKGHTV Trigger: GACTGTGTGGCCTTTGGGCCACCAGGAACTCATTCT...GGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | ACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGATCTTCAGTACCAGGCTaGCCTTTGCTGGTTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: TYPDLVWETFLNAPGRQGSSVPG*PLLVPS Trigger: TGAGGGAACCAGCAAAGGTCAGCCTGGTACTGAAGA...TCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | TTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGAGGTCTAGAATGAGTTCCTaGTGGCCCAAAGGCCACACA | + |
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Preference number: 4 (lower is better) Translates to: FLNAPGRQGHPRSEDGLRSRMSS*WPKGHT Trigger: TGTGTGGCCTTTGGGCCACCAGGAACTCATTCTAGA...CCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | ACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGGTTAAGGGAAAAAGCTaGGAGGGCTCTTCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TFLNAPGRQGHPRSEDGLVKGKS*EGSSGS Trigger: TGACCCTGAAGAGCCCTCCCAGCTTTTTCCCTTAAC...CAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | AAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCACCACCACCTGCTCATTaGCCTGGACAATCTCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KHLSRSGLGNLFECPRKAPPPAH*PGQSRL Trigger: GAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGG...TGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | AATAAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGTCAGAGTTTGGGTCTaGGGAGCTGGTCTGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NKHLSRSGLGNLFECPRKVRVWV*GAGLGP Trigger: TGGGCCCAGACCAGCTCCTCAGACCCAAACTCTGAC...CTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | CTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCTATCCAGATCTGGCCTCTCAGCCAAGCTaGCACCTTCCCGGGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LYLVEKRLSCKINTYPDLASQPS*HLPGGP Trigger: TGGACCCCCGGGAAGGTGGCAGCTTGGCTGAGAGGC...CAGATCTGGATAGGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | AATAAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGAAAGGGGAGGGGCTGTaGGGAATGAGCCCTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: NKHLSRSGLGNLFECPRKKGEGL*GMSPGV Trigger: GACTCCAGGGCTCATTCCCCACAGCCCCTCCCCTTT...CTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | AAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCACAGTTGCTGGTGGTGTaGATTTCTAGACCGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: KHLSRSGLGNLFECPRKAQLLVV*ISRPEG Trigger: CCCTTCCGGTCTAGAAATTCACACCACCAGCAACTG...TGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | ACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGATCTCGGCAGCAAAGATaGAGGGCTTGTACACATCAT | + |
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Preference number: 4 (lower is better) Translates to: TYPDLVWETFLNAPGRQGSRQQR*RACTHH Trigger: ATGATGTGTACAAGCCCTTCATCTTTGCTGCCGAGA...TCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | CTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCTATCCAGATCTGGAGGGGGCCCGGCCTTaGGCCTGGTACTTGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: LYLVEKRLSCKINTYPDLEGARP*AWYLEM Trigger: CATTTCCAAGTACCAGGCTCAAGGCCGGGCCCCCTC...CAGATCTGGATAGGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | AATAAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGCTCCTCTGGGCTaGAGCTCAGGATGTTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: NKHLSRSGLGNLFECPRKAAPLG*SSGCCD Trigger: GTCACAACATCCTGAGCTGCAGCCCAGAGGAGCTGC...CTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | ACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGAGAGAAGTCATTTAAGTaGGAGAAGAGGTACCCGTTG | + |
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Preference number: 4 (lower is better) Translates to: TYPDLVWETFLNAPGRQGEKSFK*EKRYPL Trigger: CAACGGGTACCTCTTCTCTCACTTAAATGACTTCTC...TCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGCGGCTCTCGTGTAAAATAAACACCTATCCAGATCTGGTCTGGGAAACCCACGGTTGCGCCTCATaGAAGAACTCCGCCATTGTT | + |
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Preference number: 4 (lower is better) Translates to: EKRLSCKINTYPDLVWETHGCAS*KNSAIV Trigger: AACAATGGCGGAGTTCTTTCATGAGGCGCAACCGTG...GGTTTCCCAGACCAGATCTGGATAGGTGTTTATTTTACACGAGAGCCGCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | AAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGAACTTTGCACTTGTaGGTTCAGGATCACCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KHLSRSGLGNLFECPRKAGTLHL*VQDHPA Trigger: TGCTGGGTGATCCTGAACTCACAAGTGCAAAGTTCC...TGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | CTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACACAAAGTGCAGGCAGTTaGTGGTGGTGTGAATTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LSRSGLGNLFECPRKAGTQSAGS*WWCEFL Trigger: TAGAAATTCACACCACCAGCAACTGCCTGCACTTTG...TGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | AATAAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGCAGCCCACCACCACCTaGTCATTGACCTGGACAATC | + |
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Preference number: 4 (lower is better) Translates to: NKHLSRSGLGNLFECPRKQPTTT*SLTWTI Trigger: GATTGTCCAGGTCAATGAGCAGGTGGTGGTGGGCTG...CTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | AATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCTATCCAGTGTCACTCCACGCTTaGGCTGGGCCAGGAGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: NQLYLVEKRLSCKINTYPVSLHA*AGPGEA Trigger: CGCTTCTCCTGGCCCAGCTCAAGCGTGGAGTGACAC...TGGATAGGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | GAAAAGCGGCTCTCGTGTAAAATAAACACCTATCCAGATCTGGTCTGGGAAACCTTTTCATCCTGGGGTTaGCGGTACCAGTATAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: EKRLSCKINTYPDLVWETFSSWG*RYQYRV Trigger: CACCCTATACTGGTACCGCCAACCCCAGGATGAAAA...GGTTTCCCAGACCAGATCTGGATAGGTGTTTATTTTACACGAGAGCCGCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | CGTCAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACCAGCTCAGGATGTTGTaGCAGATCCCAGCCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: RQRNQLYLVEKRLSCKINQLRML*QIPATW Trigger: CCACGTGGCTGGGATCTGTCACAACATCCTGAGCTG...GTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | CAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCGATTGGCTTAGCAGGTaGGGAGAGTCCAGGGACGTC | + |
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Preference number: 4 (lower is better) Translates to: QRNQLYLVEKRLSCKINTDWLSR*GESRDV Trigger: GACGTCCCTGGACTCTCCTCACCTGCTAAGCCAATC...GGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | CAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCAGGGGCTGTGGGGAATaGGCCCTGGAGTCAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRNQLYLVEKRLSCKINTRGCGE*ALESEF Trigger: AAACTCTGACTCCAGGGCTCATTCCCCACAGCCCCT...GGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGCGGCTCTCGTGTAAAATAAACACCTATCCAGATCTGGTCTGGGAAACCAGACTCCAGAGGTTCTaGTGTTTCTTCTGGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKRLSCKINTYPDLVWETRLQRF*CFFWKY Trigger: GTACTTCCAGAAGAAACAGCAGAACCTCTGGAGTCT...GGTTTCCCAGACCAGATCTGGATAGGTGTTTATTTTACACGAGAGCCGCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | CAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCCCTTGGACCAAGCTTTaGAAGGCCTGGGTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRNQLYLVEKRLSCKINTPWTKL*KAWVLS Trigger: GGAAAGGACCCAGGCCTTCCAAAGCTTGGTCCAAGG...GGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | CGTCAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACTTGCCCAGAGAGCCTTaGACCAAGCTTTGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQRNQLYLVEKRLSCKINLPREP*TKLWKA Trigger: GGCCTTCCAAAGCTTGGTCCAAGGCTCTCTGGGCAA...GTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | CGTCAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACGACAATCTCGTCTCCTaGCAGGATCTGGGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQRNQLYLVEKRLSCKINDNLVS*QDLGAG Trigger: ACCAGCTCCCAGATCCTGCCAGGAGACGAGATTGTC...GTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | AATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCTATCCACAGTTCCTGCAGCTTTaGCTTGAGGGTGCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NQLYLVEKRLSCKINTYPQFLQL*LEGALE Trigger: CTCCAGAGCACCCTCAAGGCAAAGCTGCAGGAACTG...TGGATAGGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | CAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCCAGATCCCAGCCACGTaGCTGCAAATCCTTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QRNQLYLVEKRLSCKINTQIPAT*LQILRM Trigger: CATCCTAAGGATTTGCAGCCACGTGGCTGGGATCTG...GGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | CAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCGCAGGCAGTTGCTGGTaGTGTGAATTTCTAGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: QRNQLYLVEKRLSCKINTAGSCW*CEFLDR Trigger: CCGGTCTAGAAATTCACACCACCAGCAACTGCCTGC...GGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR GCA 90 bp | CAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCCCACTGTCGGAACTTTaGACTTGTGAGTTCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QRNQLYLVEKRLSCKINTPLSEL*TCEFRI Trigger: GATCCTGAACTCACAAGTGCAAAGTTCCGACAGTGG...GGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR TCA 90 bp | CGTCAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACGTCACTGCTGTCTGGTaGAGAGTTAAAGGAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQRNQLYLVEKRLSCKINVTAVW*RVKGSS Trigger: AGAACTTCCTTTAACTCTTCACCAGACAGCAGTGAC...GTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTGACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CCA 90 bp | CGTCAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACGGCTTGTACACATCATaGGTCAGCTGGAACACATAT | + |
|
Preference number: 4 (lower is better) Translates to: RQRNQLYLVEKRLSCKINGLYTS*VSWNTY Trigger: ATATGTGTTCCAGCTGACCCATGATGTGTACAAGCC...GTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTGACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 90 bp | AAGAGAGGAGGGCATGGGCTTCCCGCACCAGCTCCACCGCAGCCTTaGGGACGTCAGCCGGTGTCTCAGCACAGTTGCCCAGAGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KRGGHGLPAPAPPQP*GRQPVSQHSCPESL Trigger: AAGGCTCTCTGGGCAACTGTGCTGAGACACCGGCTGACGTCCTCAAGGCTGCGGTGGAGCTGGTGCGGGAAGCCCATGCCCTCCTCTCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 90 bp | GCTGTGGGGAATGAGCCCTGGAGTCAGAGTTTGGGTCTGAGGAGCTaGTCTGGGCCCACGTCCCTCCCCAGGTTCTCAGGCCCTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVGNEPWSQSLGLRS*SGPTSLPRFSGPLS Trigger: ACTCAGAGGGCCTGAGAACCTGGGGAGGGACGTGGGCCCAGACCAGCTCCTCAGACCCAAACTCTGACTCCAGGGCTCATTCCCCACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 90 bp | CCCAGGGCCCGGAGCTGTTCCACCCCATCTAGAATGAGTTCCTGGTaGCCCAAAGGCCACACAGTCAGAGCCTCGAGGCTTTGGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: PRARSCSTPSRMSSW*PKGHTVRASRLWGQ Trigger: CTGTCCCCAAAGCCTCGAGGCTCTGACTGTGTGGCCTTTGGGCCACCAGGAACTCATTCTAGATGGGGTGGAACAGCTCCGGGCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 90 bp | CCAGCCCACCACCACCTGCTCATTGACCTGGACAATCTCGTCTCCTaGCAGGATCTGGGAGCTGGTGGCAGCCTGAACCCCTACTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAHHHLLIDLDNLVS*QDLGAGGSLNPYSG Trigger: TCCCGAGTAGGGGTTCAGGCTGCCACCAGCTCCCAGATCCTGCCAGGAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGGTGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 90 bp | TGGACAATCTCGTCTCCTGGCAGGATCTGGGAGCTGGTGGCAGCCTaGACCCCTACTCGGGACACAAAGTGCAGGCAGTTGCTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WTISSPGRIWELVAA*TPTRDTKCRQLLVV Trigger: CACCACCAGCAACTGCCTGCACTTTGTGTCCCGAGTAGGGGTTCAGGCTGCCACCAGCTCCCAGATCCTGCCAGGAGACGAGATTGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 90 bp | ATCCTTAGGATGTTTCGTTCCTTCTCAGCCTCTGGGCAGTCCTCCTaGAGGACTTGGCCCAGCTCCCCGCACAGCACGCCAATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILRMFRSFSASGQSS*RTWPSSPHSTPISW Trigger: CCAGGAGATTGGCGTGCTGTGCGGGGAGCTGGGCCAAGTCCTGCAGGAGGACTGCCCAGAGGCTGAGAAGGAACGAAACATCCTAAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 90 bp | CCTGGCAGGCAGAGAAGTCATTTAAGTGAGAGAAGAGGTACCCGTTaGGCCAAGAGAGGAGGGCATGGGCTTCCCGCACCAGCTCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: PGRQRSHLSERRGTR*AKRGGHGLPAPAPP Trigger: CGGTGGAGCTGGTGCGGGAAGCCCATGCCCTCCTCTCTTGGCTCAACGGGTACCTCTTCTCTCACTTAAATGACTTCTCTGCCTGCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 90 bp | CCCTCAGCATGTTCTTATGGGACCAGCCCACCACCACCTGCTCATTaGCCTGGACAATCTCGTCTCCTGGCAGGATCTGGGAGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSACSYGTSPPPPAH*PGQSRLLAGSGSWW Trigger: CCACCAGCTCCCAGATCCTGCCAGGAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGGTGGGCTGGTCCCATAAGAACATGCTGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 90 bp | TTTGCACTTGTGAGTTCAGGATCACCCAGCACTTCCTCCAGGGCCTaGAGTTCCTGCAGCTTTGCCTTGAGGGTGCTCTGGAGTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FALVSSGSPSTSSRA*SSCSFALRVLWSAR Trigger: CCGGGCACTCCAGAGCACCCTCAAGGCAAAGCTGCAGGAACTGCAGGCCCTGGAGGAAGTGCTGGGTGATCCTGAACTCACAAGTGCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 90 bp | TGGCAGCCTGAACCCCTACTCGGGACACAAAGTGCAGGCAGTTGCTaGTGGTGTGAATTTCTAGACCGGAAGGGTCGTCCACCTGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: WQPEPLLGTQSAGSC*WCEFLDRKGRPPAP Trigger: CGGTGCAGGTGGACGACCCTTCCGGTCTAGAAATTCACACCACCAGCAACTGCCTGCACTTTGTGTCCCGAGTAGGGGTTCAGGCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 90 bp | AGCATGTTCTTATGGGACCAGCCCACCACCACCTGCTCATTGACCTaGACAATCTCGTCTCCTGGCAGGATCTGGGAGCTGGTGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SMFLWDQPTTTCSLT*TISSPGRIWELVAA Trigger: GGCTGCCACCAGCTCCCAGATCCTGCCAGGAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGGTGGGCTGGTCCCATAAGAACATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | CCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCCAGAGCCTCGAGGCTTaGGGGACAGAGCTGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PDLVWETFLNAPGRQGHPQSLEA*GTELQQ Trigger: CTGCTGCAGCTCTGTCCCCAAAGCCTCGAGGCTCTG...GGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 90 bp | TGGTGGCAGCCTGAACCCCTACTCGGGACACAAAGTGCAGGCAGTTaGTGGTGGTGTGAATTTCTAGACCGGAAGGGTCGTCCACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WWQPEPLLGTQSAGS*WWCEFLDRKGRPPA Trigger: TGCAGGTGGACGACCCTTCCGGTCTAGAAATTCACACCACCAGCAACTGCCTGCACTTTGTGTCCCGAGTAGGGGTTCAGGCTGCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 90 bp | AGCAGCTCCCTCAGCATGTTCTTATGGGACCAGCCCACCACCACCTaGTCATTGACCTGGACAATCTCGTCTCCTGGCAGGATCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSMFLWDQPTTT*SLTWTISSPGRIWE Trigger: CTCCCAGATCCTGCCAGGAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGGTGGGCTGGTCCCATAAGAACATGCTGAGGGAGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 90 bp | CTGCAGCTTTGCCTTGAGGGTGCTCTGGAGTGCCCGGATACGGTGTaGACGCTCATTGAGATGAGGGTCACGGTTGCGCCTCATGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQLCLEGALECPDTV*TLIEMRVTVAPHER Trigger: TCTTTCATGAGGCGCAACCGTGACCCTCATCTCAATGAGCGTGCACACCGTATCCGGGCACTCCAGAGCACCCTCAAGGCAAAGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 90 bp | CAGCCTGAACCCCTACTCGGGACACAAAGTGCAGGCAGTTGCTGGTaGTGTGAATTTCTAGACCGGAAGGGTCGTCCACCTGCACCGACT | + |
|
Preference number: 5 (lower is better) Translates to: QPEPLLGTQSAGSCW*CEFLDRKGRPPAPT Trigger: AGTCGGTGCAGGTGGACGACCCTTCCGGTCTAGAAATTCACACCACCAGCAACTGCCTGCACTTTGTGTCCCGAGTAGGGGTTCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 90 bp | AGGGTGCTCTGGAGTGCCCGGATACGGTGTGCACGCTCATTGAGATaGGGGTCACGGTTGCGCCTCATGAAAGAACTCCGCCATTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVLWSARIRCARSLR*GSRLRLMKELRHCS Trigger: TGAACAATGGCGGAGTTCTTTCATGAGGCGCAACCGTGACCCTCATCTCAATGAGCGTGCACACCGTATCCGGGCACTCCAGAGCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 90 bp | GGGGGTCTCTGGCACGGGAATCTTCTTCAGTACCAGGCTGACCTTTaGTGGTTCCCTCAGCAGCTCCCTCAGCATGTTCTTATGGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: GGLWHGNLLQYQADL*WFPQQLPQHVLMGP Trigger: TGGTCCCATAAGAACATGCTGAGGGAGCTGCTGAGGGAACCAGCAAAGGTCAGCCTGGTACTGAAGAAGATTCCCGTGCCAGAGACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 90 bp | GGTCTCTGGCACGGGAATCTTCTTCAGTACCAGGCTGACCTTTGCTaGTTCCCTCAGCAGCTCCCTCAGCATGTTCTTATGGGACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLWHGNLLQYQADLC*FPQQLPQHVLMGPA Trigger: GGCTGGTCCCATAAGAACATGCTGAGGGAGCTGCTGAGGGAACCAGCAAAGGTCAGCCTGGTACTGAAGAAGATTCCCGTGCCAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 90 bp | CTGGGCTGCAGCTCAGGATGTTGTGACAGATCCCAGCCACGTGGCTaGAAATCCTTAGGATGTTTCGTTCCTTCTCAGCCTCTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGCSSGCCDRSQPRG*KSLGCFVPSQPLGS Trigger: ACTGCCCAGAGGCTGAGAAGGAACGAAACATCCTAAGGATTTGCAGCCACGTGGCTGGGATCTGTCACAACATCCTGAGCTGCAGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 90 bp | GCCCACGTCCCTCCCCAGGTTCTCAGGCCCTCTGAGTATAGCTCCTaGTTCTGTTCCTTCCACTGTCGGAACTTTGCACTTGTGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AHVPPQVLRPSEYSS*FCSFHCRNFALVSS Trigger: TGAACTCACAAGTGCAAAGTTCCGACAGTGGAAGGAACAGAACCAGGAGCTATACTCAGAGGGCCTGAGAACCTGGGGAGGGACGTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | ACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGATGTGTCACTCCACGCTaGAGCTGGGCCAGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TYPDLVWETFLNAPGRQGCVTPR*SWARRS Trigger: GCTTCTCCTGGCCCAGCTCAAGCGTGGAGTGACACA...TCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | CTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACAGTTGCCCAGAGAGCCTaGGACCAAGCTTTGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSRSGLGNLFECPRKAGTVAQRA*DQALEG Trigger: GCCTTCCAAAGCTTGGTCCAAGGCTCTCTGGGCAAC...TGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | CTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACAGAGAAGAGGTACCCGTaGAGCCAAGAGAGGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRSGLGNLFECPRKAGTEKRYP*SQERRA Trigger: TGCCCTCCTCTCTTGGCTCAACGGGTACCTCTTCTC...TGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | CTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCAGGGACACCAAGGATGGGACTCTaGTCAGGGTGTCCCGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSRSGLGNLFECPRKAGTPRMGL*SGCPED Trigger: GTCTTCGGGACACCCTGACAAGAGTCCCATCCTTGG...TGTCCCTGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | ACCTTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGACCACCACCTGCTCATaGACCTGGACAATCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TFLNAPGRQGHPRSEDGLTTTCS*TWTISS Trigger: AGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGGT...CAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | TTTTTGAATGCCCCAGGAAGGCAGGGACATCCCAGATCTGAGGATGGGTTGAGGGCAAAGATGAAGGGCTaGTACACATCATGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLNAPGRQGHPRSEDGLRAKMKG*YTSWVS Trigger: GCTGACCCATGATGTGTACAAGCCCTTCATCTTTGC...CCTCAACCCATCCTCAGATCTGGGATGTCCCTGCCTTCCTGGGGCATTCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | AATAAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGGAGGGGGCCCGGCCTaGAGCCTGGTACTTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NKHLSRSGLGNLFECPRKGGGPA*SLVLGN Trigger: ATTTCCAAGTACCAGGCTCAAGGCCGGGCCCCCTCC...CTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | AAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCACCCTGGAGTCAGAGTTaGGGTCTGAGGAGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KHLSRSGLGNLFECPRKAPWSQS*GLRSWS Trigger: AGACCAGCTCCTCAGACCCAAACTCTGACTCCAGGG...TGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | AATAAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGGTGTCTCAGCACAGTaGCCCAGAGAGCCTTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: NKHLSRSGLGNLFECPRKGVSAQ*PREPWT Trigger: GGTCCAAGGCTCTCTGGGCAACTGTGCTGAGACACC...CTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS-3UTR CAA 90 bp | AAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGGCATATAGGGTGTGTCCCTaGAGCACAAACCAGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KHLSRSGLGNLFECPRKAYRVCP*STNQQR Trigger: CCGCTGCTGGTTTGTGCTCAAGGGACACACCCTATA...TGCCTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
||
| CDS-3UTR CAA 90 bp | AATAAACACCTATCCAGATCTGGTCTGGGAAACCTTTTTGAATGCCCCAGGAAGTCCTGCAGCTTTGCCTaGAGGGTGCTCTGGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NKHLSRSGLGNLFECPRKSCSFA*RVLWSA Trigger: GGCACTCCAGAGCACCCTCAAGGCAAAGCTGCAGGA...CTTCCTGGGGCATTCAAAAAGGTTTCCCAGACCAGATCTGGATAGGTGTTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
||
| CDS TCA 90 bp | GTCGCACCCACTTGCTCAGATCAGACAGGGTCTCGGCAGCAAAGATaGAGGGCTTGTACACATCATGGGTCAGCTGGAACACATATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VAPTCSDQTGSRQQR*RACTHHGSAGTHIF Trigger: AAAAATATGTGTTCCAGCTGACCCATGATGTGTACAAGCCCTTCATCTTTGCTGCCGAGACCCTGTCTGATCTGAGCAAGTGGGTGCGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAATCAACTTTATTTGGTGGAAAAGCGGCTCTCGTGTAAAATAAACACCGAAAGAACTCCGCCATaGTTCATGGGTCAGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRNQLYLVEKRLSCKINTERTPP*FMGQGL Trigger: CAGCCCCTGACCCATGAACAATGGCGGAGTTCTTTC...GGTGTTTATTTTACACGAGAGCCGCTTTTCCACCAAATAAAGTTGATTTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
||
| CDS TCA 72 bp | AGGGGTGAAGCCACGGGTGATGTGTCACTCCACGCTTaGGCTGGGCCAGGAGAAGCGGAGCGGGACCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGEATGDVSLHA*AGPGEAERDPA Trigger: GGCTGGGTCCCGCTCCGCTTCTCCTGGCCCAGCTCAAGCGTGGAGTGACACATCACCCGTGGCTTCACCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
||
| CDS TCA 72 bp | CCTGGGGTTGGCGGTACCAGTATAGGGTGTGTCCCTTaGGCACAAACCAGCAGCGGCGCCAGCGTGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGVGGTSIGCVP*AQTSSGASVGP Trigger: TGGGCCCACGCTGGCGCCGCTGCTGGTTTGTGCTCAAGGGACACACCCTATACTGGTACCGCCAACCCCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | GCCCTGGAGTCAGAGTTTGGGTCTGAGGAGCTGGTCTaGGCCCACGTCCCTCCCCAGGTTCTCAGGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ALESEFGSEELV*AHVPPQVLRPS Trigger: AGAGGGCCTGAGAACCTGGGGAGGGACGTGGGCCCAGACCAGCTCCTCAGACCCAAACTCTGACTCCAGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 72 bp | GGAGGGGCTGTGGGGAATGAGCCCTGGAGTCAGAGTTaGGGTCTGAGGAGCTGGTCTGGGCCCACGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GGAVGNEPWSQS*GLRSWSGPTSL Trigger: GAGGGACGTGGGCCCAGACCAGCTCCTCAGACCCAAACTCTGACTCCAGGGCTCATTCCCCACAGCCCCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 90 bp | CAAGAGAGGAGGGCATGGGCTTCCCGCACCAGCTCCACCGCAGCCTaGAGGACGTCAGCCGGTGTCTCAGCACAGTTGCCCAGAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: QERRAWASRTSSTAA*RTSAGVSAQLPREP Trigger: AGGCTCTCTGGGCAACTGTGCTGAGACACCGGCTGACGTCCTCAAGGCTGCGGTGGAGCTGGTGCGGGAAGCCCATGCCCTCCTCTCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | GAGAAGAGGTACCCGTTGAGCCAAGAGAGGAGGGCATaGGCTTCCCGCACCAGCTCCACCGCAGCCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: EKRYPLSQERRA*ASRTSSTAALR Trigger: CCTCAAGGCTGCGGTGGAGCTGGTGCGGGAAGCCCATGCCCTCCTCTCTTGGCTCAACGGGTACCTCTTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 90 bp | AGCCGGTGTCTCAGCACAGTTGCCCAGAGAGCCTTGGACCAAGCTTaGGAAGGCCTGGGTCCTTTCCAGCAGCCCCTGAGCCAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SRCLSTVAQRALDQA*EGLGPFQQPLSQAL Trigger: CAGAGCCTGGCTCAGGGGCTGCTGGAAAGGACCCAGGCCTTCCAAAGCTTGGTCCAAGGCTCTCTGGGCAACTGTGCTGAGACACCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 72 bp | GACGGTGGGTTCAGGGGCAGCGATTGGCTTAGCAGGTaGGGAGAGTCCAGGGACGTCTGTGAGGGGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: DGGFRGSDWLSR*GESRDVCEGVS Trigger: AGAGACCCCCTCACAGACGTCCCTGGACTCTCCTCACCTGCTAAGCCAATCGCTGCCCCTGAACCCACCGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | TGGCCCAAAGGCCACACAGTCAGAGCCTCGAGGCTTTaGGGACAGAGCTGCAGCAGGTACTTCCCAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: WPKGHTVRASRL*GQSCSRYFPGS Trigger: GCTGCCTGGGAAGTACCTGCTGCAGCTCTGTCCCCAAAGCCTCGAGGCTCTGACTGTGTGGCCTTTGGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | CTCCAGAGGTTCTGCTGTTTCTTCTGGAAGTACGCCTaGTGGTCCAGGGGGAGTGGGCGGGGACTGAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: LQRFCCFFWKYA*WSRGSGRGLSV Trigger: GACGCTCAGTCCCCGCCCACTCCCCCTGGACCACCAGGCGTACTTCCAGAAGAAACAGCAGAACCTCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 72 bp | AGCCCAGGGCCCGGAGCTGTTCCACCCCATCTAGAATaGGTTCCTGGTGGCCCAAAGGCCACACAGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SPGPGAVPPHLE*VPGGPKATQSE Trigger: CTCTGACTGTGTGGCCTTTGGGCCACCAGGAACTCATTCTAGATGGGGTGGAACAGCTCCGGGCCCTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 72 bp | TGCCTTGAGGGTGCTCTGGAGTGCCCGGATACGGTGTaGACGCTCATTGAGATGAGGGTCACGGTTGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: CLEGALECPDTV*TLIEMRVTVAP Trigger: AGGCGCAACCGTGACCCTCATCTCAATGAGCGTGCACACCGTATCCGGGCACTCCAGAGCACCCTCAAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | CACCACCTGCTCATTGACCTGGACAATCTCGTCTCCTaGCAGGATCTGGGAGCTGGTGGCAGCCTGAACCCC | + |
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Preference number: 6 (lower is better) Translates to: HHLLIDLDNLVS*QDLGAGGSLNP Trigger: GGGGTTCAGGCTGCCACCAGCTCCCAGATCCTGCCAGGAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 90 bp | GCCTTTTCATCCTGGGGTTGGCGGTACCAGTATAGGGTGTGTCCCTaGAGCACAAACCAGCAGCGGCGCCAGCGTGGGCCCATAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AFSSWGWRYQYRVCP*STNQQRRQRGPIKP Trigger: TGGCTTTATGGGCCCACGCTGGCGCCGCTGCTGGTTTGTGCTCAAGGGACACACCCTATACTGGTACCGCCAACCCCAGGATGAAAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | GCTGGTTCCCTCAGCAGCTCCCTCAGCATGTTCTTATaGGACCAGCCCACCACCACCTGCTCATTGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: AGSLSSSLSMFL*DQPTTTCSLTW Trigger: CCAGGTCAATGAGCAGGTGGTGGTGGGCTGGTCCCATAAGAACATGCTGAGGGAGCTGCTGAGGGAACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | CAGAGGTTCTGCTGTTTCTTCTGGAAGTACGCCTGGTaGTCCAGGGGGAGTGGGCGGGGACTGAGCGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: QRFCCFFWKYAW*SRGSGRGLSVK Trigger: TTTGACGCTCAGTCCCCGCCCACTCCCCCTGGACCACCAGGCGTACTTCCAGAAGAAACAGCAGAACCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 90 bp | TCCCTCAGCATGTTCTTATGGGACCAGCCCACCACCACCTGCTCATaGACCTGGACAATCTCGTCTCCTGGCAGGATCTGGGAGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SLSMFLWDQPTTTCS*TWTISSPGRIWELV Trigger: CACCAGCTCCCAGATCCTGCCAGGAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGGTGGGCTGGTCCCATAAGAACATGCTGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 72 bp | TGGAGTGCCCGGATACGGTGTGCACGCTCATTGAGATaGGGGTCACGGTTGCGCCTCATGAAAGAACTCCGC | + |
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Preference number: 6 (lower is better) Translates to: WSARIRCARSLR*GSRLRLMKELR Trigger: GCGGAGTTCTTTCATGAGGCGCAACCGTGACCCTCATCTCAATGAGCGTGCACACCGTATCCGGGCACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | CGGAGCTGTTCCACCCCATCTAGAATGAGTTCCTGGTaGCCCAAAGGCCACACAGTCAGAGCCTCGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RSCSTPSRMSSW*PKGHTVRASRL Trigger: AAGCCTCGAGGCTCTGACTGTGTGGCCTTTGGGCCACCAGGAACTCATTCTAGATGGGGTGGAACAGCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | TTATGGGACCAGCCCACCACCACCTGCTCATTGACCTaGACAATCTCGTCTCCTGGCAGGATCTGGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LWDQPTTTCSLT*TISSPGRIWEL Trigger: CAGCTCCCAGATCCTGCCAGGAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGGTGGGCTGGTCCCATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 72 bp | ACTCGGGACACAAAGTGCAGGCAGTTGCTGGTGGTGTaGATTTCTAGACCGGAAGGGTCGTCCACCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: TRDTKCRQLLVV*ISRPEGSSTCT Trigger: GGTGCAGGTGGACGACCCTTCCGGTCTAGAAATTCACACCACCAGCAACTGCCTGCACTTTGTGTCCCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 72 bp | CAGTCTTCCTCTCTGGCAGAGGAGGGGGCCCGGCCTTaGGCCTGGTACTTGGAAATGCAGGTAATGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: QSSSLAEEGARP*AWYLEMQVMRC Trigger: ACATCTCATTACCTGCATTTCCAAGTACCAGGCTCAAGGCCGGGCCCCCTCCTCTGCCAGAGAGGAAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 72 bp | CTCAGCATGTTCTTATGGGACCAGCCCACCACCACCTaGTCATTGACCTGGACAATCTCGTCTCCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSMFLWDQPTTT*SLTWTISSPGR Trigger: CCTGCCAGGAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGGTGGGCTGGTCCCATAAGAACATGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | CCCCTACTCGGGACACAAAGTGCAGGCAGTTGCTGGTaGTGTGAATTTCTAGACCGGAAGGGTCGTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: PLLGTQSAGSCW*CEFLDRKGRPP Trigger: AGGTGGACGACCCTTCCGGTCTAGAAATTCACACCACCAGCAACTGCCTGCACTTTGTGTCCCGAGTAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | GAACCCCTACTCGGGACACAAAGTGCAGGCAGTTGCTaGTGGTGTGAATTTCTAGACCGGAAGGGTCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: EPLLGTQSAGSC*WCEFLDRKGRP Trigger: TGGACGACCCTTCCGGTCTAGAAATTCACACCACCAGCAACTGCCTGCACTTTGTGTCCCGAGTAGGGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | GAGTTCCATCTGCTAAAAGACCTTCAGACGGAACCCTaGGAGACGGTGGGTTCAGGGGCAGCGATTGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: EFHLLKDLQTEP*ETVGSGAAIGL Trigger: TAAGCCAATCGCTGCCCCTGAACCCACCGTCTCCCAGGGTTCCGTCTGAAGGTCTTTTAGCAGATGGAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 72 bp | ATGTTCTTATGGGACCAGCCCACCACCACCTGCTCATaGACCTGGACAATCTCGTCTCCTGGCAGGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: MFLWDQPTTTCS*TWTISSPGRIW Trigger: CCAGATCCTGCCAGGAGACGAGATTGTCCAGGTCAATGAGCAGGTGGTGGTGGGCTGGTCCCATAAGAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 72 bp | CAGAGAAGTCATTTAAGTGAGAGAAGAGGTACCCGTTaGGCCAAGAGAGGAGGGCATGGGCTTCCCGCACCA | + |
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Preference number: 6 (lower is better) Translates to: QRSHLSERRGTR*AKRGGHGLPAP Trigger: TGGTGCGGGAAGCCCATGCCCTCCTCTCTTGGCTCAACGGGTACCTCTTCTCTCACTTAAATGACTTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 72 bp | TGGCACGGGAATCTTCTTCAGTACCAGGCTGACCTTTaGTGGTTCCCTCAGCAGCTCCCTCAGCATGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: WHGNLLQYQADL*WFPQQLPQHVL Trigger: AAGAACATGCTGAGGGAGCTGCTGAGGGAACCAGCAAAGGTCAGCCTGGTACTGAAGAAGATTCCCGTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 72 bp | CTGTCTGGTGAAGAGTTAAAGGAAGTTCTCGGACTCTaGAGGGGTGAAGCCACGGGTGATGTGTCACTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LSGEELKEVLGL*RGEATGDVSLH Trigger: GTGGAGTGACACATCACCCGTGGCTTCACCCCTGCAGAGTCCGAGAACTTCCTTTAACTCTTCACCAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | CACGGGAATCTTCTTCAGTACCAGGCTGACCTTTGCTaGTTCCCTCAGCAGCTCCCTCAGCATGTTCTTATG | + |
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Preference number: 6 (lower is better) Translates to: HGNLLQYQADLC*FPQQLPQHVLM Trigger: CATAAGAACATGCTGAGGGAGCTGCTGAGGGAACCAGCAAAGGTCAGCCTGGTACTGAAGAAGATTCCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CCA 72 bp | TTGGAGAGATTGATAAGCCCTTCGGCCTTTTCATCCTaGGGTTGGCGGTACCAGTATAGGGTGTGTCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LERLISPSAFSS*GWRYQYRVCPL Trigger: CAAGGGACACACCCTATACTGGTACCGCCAACCCCAGGATGAAAAGGCCGAAGGGCTTATCAATCTCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS TCA 72 bp | ACTTGCTCAGATCAGACAGGGTCTCGGCAGCAAAGATaGAGGGCTTGTACACATCATGGGTCAGCTGGAACA | + |
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Preference number: 6 (lower is better) Translates to: TCSDQTGSRQQR*RACTHHGSAGT Trigger: TGTTCCAGCTGACCCATGATGTGTACAAGCCCTTCATCTTTGCTGCCGAGACCCTGTCTGATCTGAGCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS GCA 72 bp | AGCTCAGGATGTTGTGACAGATCCCAGCCACGTGGCTaGAAATCCTTAGGATGTTTCGTTCCTTCTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSGCCDRSQPRG*KSLGCFVPSQP Trigger: AGGCTGAGAAGGAACGAAACATCCTAAGGATTTGCAGCCACGTGGCTGGGATCTGTCACAACATCCTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 90 bp | CTCGTGGCTATACCTTTAGATTTCTTCCGACCAAGGATGGGACTCTaGTCAGGGTGTCCCGAAGACTCCAGAGGTTCTGCTGTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LVAIPLDFFRPRMGL*SGCPEDSRGSAVSS Trigger: AGAAGAAACAGCAGAACCTCTGGAGTCTTCGGGACACCCTGACAAGAGTCCCATCCTTGGTCGGAAGAAATCTAAAGGTATAGCCACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 72 bp | ATACCTTTAGATTTCTTCCGACCAAGGATGGGACTCTaGTCAGGGTGTCCCGAAGACTCCAGAGGTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: IPLDFFRPRMGL*SGCPEDSRGSA Trigger: AGCAGAACCTCTGGAGTCTTCGGGACACCCTGACAAGAGTCCCATCCTTGGTCGGAAGAAATCTAAAGGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 72 bp | TACTTGGAAATGCAGGTAATGAGATGTCGCACCCACTaGCTCAGATCAGACAGGGTCTCGGCAGCAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: YLEMQVMRCRTH*LRSDRVSAAKM Trigger: CATCTTTGCTGCCGAGACCCTGTCTGATCTGAGCAAGTGGGTGCGACATCTCATTACCTGCATTTCCAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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| CDS CAA 72 bp | AGATCAGACAGGGTCTCGGCAGCAAAGATGAAGGGCTaGTACACATCATGGGTCAGCTGGAACACATATTTT | + |
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Preference number: 6 (lower is better) Translates to: RSDRVSAAKMKG*YTSWVSWNTYF Trigger: AAAATATGTGTTCCAGCTGACCCATGATGTGTACAAGCCCTTCATCTTTGCTGCCGAGACCCTGTCTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030645.9 |
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